BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043999
         (574 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/569 (63%), Positives = 450/569 (79%), Gaps = 10/569 (1%)

Query: 7   GEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAA 66
           G+ QAL L  I +M K+PPL+A SLFN + +QG QHT  SIS +L+ LL     H    A
Sbjct: 2   GKQQALIL--IQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDH---HKLPHA 56

Query: 67  QTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNP-VTKSRLYESIIDAHLKSRLSDQA 125
           Q+LIL+I+S +I+S  FT  SLL HLTQ    + NP +T + LYESII+AHLKS+L D+A
Sbjct: 57  QSLILQILSNKISSPFFTVPSLLHHLTQ----NQNPSMTTALLYESIINAHLKSQLLDKA 112

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGC 185
           L +F++M+D G+  R N FNSLL  +++S  F+K WLFF+E + +V+ DVYSFGI+IKGC
Sbjct: 113 LIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGC 172

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           CE G+L+K+F++L  L++MG SPNVVIYT+LIDGCCKNGDIERA++ F K+GE+GLVA Q
Sbjct: 173 CENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQ 232

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +T+TVLI GLFK GL+KDGF+ +EKM++NG+ P+LYTYNCL++EYC EGK+   F LFDE
Sbjct: 233 YTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDE 292

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR R V  NVVTYNTLI G+C+E RV EAE+L+DQMK A +SPN+ITYN LI GFCD G 
Sbjct: 293 MRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGN 352

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            DKA  L +QLKSNG SPS+VTYN+LI  +SKAGN K  +DL REME RGI+PS+VT T+
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTV 412

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID++VR  +MEKAF++YS M+K G  PDVY YGVLIHGLCMKGNMKE+SKLF SM E  
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH 472

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +EP+DV+YN MI GYCKE NSYRALRLL EM  KGLVPN+ASYSS IGVLC+DGKW EAE
Sbjct: 473 VEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAE 532

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           VLL++M++L LKPS S+ N++ +AKN  E
Sbjct: 533 VLLDKMIELQLKPSASILNMISKAKNFTE 561


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/571 (61%), Positives = 450/571 (78%), Gaps = 13/571 (2%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLS-KMS 59
           MAQ++Q       L L+ +M K PPLKA SLF  ++ QG QHT QSIS IL LL+S  + 
Sbjct: 1   MAQTQQA------LILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLF 54

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
           SHS    Q+L+LK+ISG+I+SSSFTP SL   LTQ  P   +  T   ++E+II+AH++S
Sbjct: 55  SHS----QSLLLKLISGQISSSSFTPSSLFHELTQ--PHLDSFPTHVLIHEAIINAHVRS 108

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
           +L +QALFYF+QM+  G+ P SNTFN+LLI +IKS  F+K W  F+E +  V+LDVYSFG
Sbjct: 109 QLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFG 168

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           I+IKGCCE G L+K FEVL Q+EEMG SPNVV+YT+LIDGCCKNGDIER K LF K+GEL
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +VA Q+TYTVLI G FK GL+KDG E YEKM+L G+ P++YTYN +I   CN+GK++  
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F+LFDEMR R VACNVVTYNTLI GLC+E RV EAERL+ +MK  G+SPN+I+YN LIDG
Sbjct: 289 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 348

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C  G  DKA  LFNQ+KS+GQSPS+ TYN+LI  FS+A NS   +D+VREME RG++PS
Sbjct: 349 YCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 408

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           +VTYTIL+D+ VRSD++EKAF++YS M+K+G   D+Y YGVLIHGLC+ G+MKEASKLF 
Sbjct: 409 KVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFK 468

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           S+ E  L+PNDV+YN MI+GYCKEG+SYRALRLL EM E G+VPN+ASY+STI +LC+D 
Sbjct: 469 SLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDE 528

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           KW EAEVLL  M++LGLKPS+S++N++ +A+
Sbjct: 529 KWTEAEVLLKDMIELGLKPSISIWNMISKAR 559



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 36/164 (21%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M   G+ P   T+  L+  +++S + +K +  +S   +  +  D+Y +G+LI G C  G
Sbjct: 399 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 458

Query: 190 DLNKAFEVLNQLEEM-----------------------------------GFSPNVVIYT 214
           D+ +A ++   L+EM                                   G  PNV  Y 
Sbjct: 459 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 518

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           S I   CK+     A++L + + ELGL  +   + ++    F N
Sbjct: 519 STIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/552 (62%), Positives = 439/552 (79%), Gaps = 7/552 (1%)

Query: 20  MAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRI 78
           M K PPLKA SLF  ++ QG QHT QSIS IL LL+S  + SHS    Q+L+LK+ISG+I
Sbjct: 1   MVKSPPLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHS----QSLLLKLISGQI 56

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           +SSSFTP SL   LTQ  P   +  T   ++E+II+AH++S+L +QALFY +QM+  G+ 
Sbjct: 57  SSSSFTPSSLFHELTQ--PHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLV 114

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P SNTFN+LLI +IKS  F+K W  F+E +  V+LDVYSFGI+IKGCCE G L+K FEVL
Sbjct: 115 PGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVL 174

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            Q+EEMG SPNVV+YT+LIDGCCKNGDIER K LF K+GEL +VA Q+TYTVLI G FK 
Sbjct: 175 GQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKM 234

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           GL+KDG E YEKM+L G+ P++YTYN +I   CN+GK++  F+LFDEMR R VACNVVTY
Sbjct: 235 GLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTY 294

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI GLC+E RV EAERL+ +MK  G+SPN+I+YN LIDG+C  G  DKA  LFNQ+KS
Sbjct: 295 NTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS 354

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           +GQSPS+ TYN+LI  FS+A NS   +D+VREME RG++PS+VTYTIL+D+ VRSD++EK
Sbjct: 355 SGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 414

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF++YS M+K+G   D+Y YGVLIHGLC+ G+MKEASKLF S+ E  L+PNDV+YN MI+
Sbjct: 415 AFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 474

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCKEG+SYRALRLL EM E G+VPN+ASY+STI +LC+D KW EAEVLL  M++LGLKP
Sbjct: 475 GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP 534

Query: 559 SVSLYNILYRAK 570
           S+S++N++ +A+
Sbjct: 535 SISIWNMISKAR 546



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 36/164 (21%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M   G+ P   T+  L+  +++S + +K +  +S   +  +  D+Y +G+LI G C  G
Sbjct: 386 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 445

Query: 190 DLNKAFEVLNQLEEM-----------------------------------GFSPNVVIYT 214
           D+ +A ++   L+EM                                   G  PNV  Y 
Sbjct: 446 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 505

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           S I   CK+     A++L + + ELGL  +   + ++    F N
Sbjct: 506 STIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/575 (56%), Positives = 412/575 (71%), Gaps = 21/575 (3%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           M+QS +       L LI +M K+PP KA  LFN A+ QGLQHT  SIS IL  LLS   S
Sbjct: 1   MSQSHEA------LILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLS---S 51

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ--LFPSSSNPVTKSRLYESIIDAHLK 118
                AQ+LIL++ISGRI      P SL+  LTQ    P S    T + LY+++++A++ 
Sbjct: 52  GMLPQAQSLILRLISGRI------PSSLMLQLTQAHFTPCS----TYTPLYDTVVNAYVH 101

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSF 178
           S  +DQAL + H M+  G  P SNTFN+LL  +I+S  FDK W  F+E + KV LD YSF
Sbjct: 102 SHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSF 161

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           GI+IKGCCEAG   K F +L  LEE G SPNVVIYT+LIDGCCK+G++  AK LF K+  
Sbjct: 162 GIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNR 221

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           LGLV   HTY+VL+ G FK GLQ++GF+ YE M+ +G+ P+ Y YNCLI EYCN+G V +
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDK 281

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            FK+F EMR + +AC V+TYN LI GLC+  +  EA +L+ ++   G+SPN++TYN LI+
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           GFCD  + D A RLFNQLKS+G SP++VTYN LI  +SK  N   A DLV+EMEER I P
Sbjct: 342 GFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAP 401

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S+VTYTILID+F R +  EKA EM+SLM+KSG  PDVYTY VL+HGLC+ GNMKEASKLF
Sbjct: 402 SKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLF 461

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
            S+ E  L+PN V+YN MI GYCKEG+SYRALRLL EM + G+VPN+AS+ STIG+LC+D
Sbjct: 462 KSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRD 521

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            KW EAE+LL QM+  GLKPSVSLY ++++ K ++
Sbjct: 522 EKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGDV 556



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 172/364 (47%), Gaps = 19/364 (5%)

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS-------- 279
           +A +LF      GL  T H+ + ++  L  +G+         ++ ++G  PS        
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRL-ISGRIPSSLMLQLTQ 79

Query: 280 -------LYT--YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
                   YT  Y+ +++ Y +     +       M H        T+N L+C L +   
Sbjct: 80  AHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNY 139

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
             +A  + +++K + +  +  ++  +I G C+AG   K FRL   L+  G SP+VV Y  
Sbjct: 140 FDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    K GN  +A +L  +M   G+ P+  TY++L++ F +     + F+MY  M++SG
Sbjct: 199 LIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSG 258

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+ Y Y  LI   C  G + +A K+F  M E  +    + YN++I G C+      A+
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           +L+ ++N+ GL PNI +Y+  I   C   K   A  L NQ+   GL P++  YN L    
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 571 NNIE 574
           + +E
Sbjct: 379 SKVE 382


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/573 (56%), Positives = 410/573 (71%), Gaps = 17/573 (2%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           M+QS +       L LI +M K+PP KA  LFN A+ QGLQHT  SIS IL  LLS   S
Sbjct: 1   MSQSHEA------LILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLS---S 51

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
                AQ+LIL++ISGRI      P SL+  LTQ   +    +T + LY++I++A++ S 
Sbjct: 52  GMLPQAQSLILRLISGRI------PSSLMLQLTQAHFTPC--LTYTPLYDTIVNAYVHSH 103

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
            +DQAL + H M+  G  P SNTFN+L+  +I+S  FDK W  F+E + KV LD YSFGI
Sbjct: 104 STDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGI 163

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +IKGCCEAG   K F +L  LEE G SPNVVIYT+LIDGCCK G++  AK LF K+  LG
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLG 223

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           LV   HTY+VL+ G FK GLQ++GF+ YE M+ +G+ P+ Y YNCLI EYCN G V + F
Sbjct: 224 LVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAF 283

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F EMR + +AC V+TYN LI GLC+  +  EA +L+ ++   G+SPN++TYN LI+GF
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CD G+ D A RLFNQLKS+G SP++VTYN LI  +SK  N   A DLV+EMEER I PS+
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSK 403

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILID+F R +  EKA EM+SLM+KSG  PDVYTY VLIHGLC+ GNMKEASKLF S
Sbjct: 404 VTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKS 463

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + E  L+PN V+YN MI GYCKEG+SYRALRLL EM   G+VPN+AS+ STIG+LC+D K
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEK 523

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           W EAE+LL QM+  GLKPSVSLY ++++ K ++
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLYKMVHKVKGDV 556



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 174/364 (47%), Gaps = 19/364 (5%)

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS-------- 279
           +A +LF      GL  T H+ + ++  L  +G+         ++ ++G  PS        
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRL-ISGRIPSSLMLQLTQ 79

Query: 280 -------LYT--YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
                   YT  Y+ +++ Y +     +       M H        T+N L+C L +   
Sbjct: 80  AHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNY 139

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
             +A  + +++K + +  +  ++  +I G C+AG   K FRL   L+  G SP+VV Y  
Sbjct: 140 FDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    K GN  +A +L  +M+  G+ P+  TY++L++ F +     + F+MY  M++SG
Sbjct: 199 LIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSG 258

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+ Y Y  LI   C  G + +A K+F  M E  +    + YN++I G C+      A+
Sbjct: 259 IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           +L+ ++N+ GL PNI +Y+  I   C  GK   A  L NQ+   GL P++  YN L    
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 571 NNIE 574
           + +E
Sbjct: 379 SKVE 382


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/560 (56%), Positives = 423/560 (75%), Gaps = 7/560 (1%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           TL L++ + K+PPLKAFSL N  +  G QHT +SIS    LL   +S + ++ AQ+L+L+
Sbjct: 8   TLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESIS---ILLRLLLSGNLYSHAQSLLLQ 64

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +ISG+I S  FT  SLL +LT+    S    TKSRLYE II+A+++S+  D +++YF++M
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTE----SETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEM 120

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           +D G  P SN FN+LL FV+ S SF++ W FF+E++ KV LDVYSFGI+IKGCCEAG++ 
Sbjct: 121 VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIE 180

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           K+F++L +L E GFSPNVVIYT+LIDGCCK G+IE+AK LF ++G+ GLVA + TYTVLI
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GLFKNG++K GFE YEKMQ +GV P+L+TYNC++++ C +G+  + FK+FDEMR R V+
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS 300

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
           CN+VTYNTLI GLC+EM+  EA  ++DQMK  GI+PN+ITYN LIDGFC   +  KA  L
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL 360

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              LKS G SPS+VTYN+L+  F K G++  A  +V+EMEERGI PS+VTYTILID+F R
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           SD+MEKA ++ S M++ G +PDV+TY VLIHG C+KG M EAS+LF SM E K EPN+V+
Sbjct: 421 SDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVI 480

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN M+ GYCKEG+SYRALRL  EM EK L PN+ASY   I VLC++ K  EAE L+ +M+
Sbjct: 481 YNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMI 540

Query: 553 KLGLKPSVSLYNILYRAKNN 572
             G+ PS S+ N++ RAKN+
Sbjct: 541 DSGIGPSDSILNLISRAKND 560


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/560 (56%), Positives = 423/560 (75%), Gaps = 7/560 (1%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           TL L++ + K+PPLKAFSL N  +  G QHT +SIS    LL   +S + ++ AQ+L+L+
Sbjct: 8   TLILLATLIKVPPLKAFSLLNSPNFHGFQHTHESIS---ILLRLLLSGNLYSHAQSLLLQ 64

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +ISG+I S  FT  SLL ++T+    S    TKSRLYE +I+A+++S+  D ++ YF++M
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTE----SETSETKSRLYEVMINAYVQSQSLDSSISYFNEM 120

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           +D G  P SN FN+LL FV+ S SF++ W FF+E++ KV+LDVYSFGI+IKGCCEAG++ 
Sbjct: 121 VDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIE 180

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           K+F++L +L E GFSPNVVIYT+LIDGCCK G+IE+AK LF ++G+ GLVA + TYTVLI
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GLFKNG++K GFE YEKMQ +GV P+LYTYNC+++++C +G+  + FKLFDEMR R V+
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVS 300

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
           CN+VTYNTLI GLC+EM+  EA +++DQMK  GI+PN+ITYN LIDGFC  G+  KA  L
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              LKS G SPS+VTYN+L+  F K G++  A  +V+EMEERGI PS++TYTILID+F R
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFAR 420

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
            D+MEKA ++ S M++ G +PDV+TY VLIHG C+KG M EAS+LF  M   KLEPN V+
Sbjct: 421 MDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVI 480

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN M+ GYCKEG+SYRALRL  EM EK L PN+ASY   I VLC++ K  EAE L+ +M+
Sbjct: 481 YNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMI 540

Query: 553 KLGLKPSVSLYNILYRAKNN 572
             G+ PS S+ N++ RAKN+
Sbjct: 541 DTGIDPSDSILNLISRAKND 560


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/560 (56%), Positives = 423/560 (75%), Gaps = 7/560 (1%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           TL L++ + K+PPLKAFSL N  +  G QHT +SIS    LL   +S + ++ AQ+L+L+
Sbjct: 8   TLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESIS---ILLRLLLSGNLYSHAQSLLLQ 64

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +ISG+I S  FT  SLL +LT+    S    TKSRLYE II+A+++S+  D +++YF++M
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTE----SETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEM 120

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           +D G  P SN FN+LL FV+ S SF++ W FF+E++ KV LDVYSFGI+IKGCCEAG++ 
Sbjct: 121 VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIE 180

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           K+F++L +L E GFSPNVVIYT+LIDGCCK G+IE+AK LF ++G+ GLVA + TYTVLI
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GLFKNG++K GFE YEKMQ +GV P+LYTYNC++++ C +G+  + FK+FDEMR R V+
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS 300

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
           CN+VTYNTLI GLC+EM+  EA +++DQMK   I+PN+ITYN LIDGFC  G+  KA  L
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSL 360

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              LKS G SPS+VTYNVL+  F + G++  A+ +V+EMEERGI PS+VTYTILID+F R
Sbjct: 361 CRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           SD+ME A ++ S M++ G  PDV+TY VLIHG C+KG M EAS+LF SM E  LEPN+V+
Sbjct: 421 SDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVI 480

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN MI GYCKEG+SYRALRL  +M EK L PN+ASYS  I VLC++ K  EAE L+ +M+
Sbjct: 481 YNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMI 540

Query: 553 KLGLKPSVSLYNILYRAKNN 572
             G+ PS ++ N++ RAK +
Sbjct: 541 DSGIDPSDTICNLISRAKTD 560


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 321/561 (57%), Positives = 425/561 (75%), Gaps = 9/561 (1%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLIL 71
           TL L++ + K PPLKAFSL N  +    QHT +SISI+LRLLL   + SH    AQ+L+L
Sbjct: 8   TLVLLANLIKFPPLKAFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSH----AQSLLL 63

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
           ++ISG+I S  FT  SLL +LT+    S    TK RLYE II+++++S+  + ++ YF++
Sbjct: 64  QVISGKIHSQFFTSSSLLHYLTE----SETSKTKFRLYEVIINSYVQSQSLNLSISYFNE 119

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
           M+D+G  P SN FN LL FV+ S SF++ W FF+EN+ KV LDVYSFGILIKGCCEAG++
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            K+F++L +L E GFSPNVVIYT+LIDGCCK G+IE+AK LF ++G+LGLVA + TYTVL
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I GLFKNG++K GFE YEKMQ +GV P+LYTYNC++++ C +G+  + F++FDEMR R V
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           +CN+VTYNTLI GLC+EM++ EA +++DQMK  GI+PN+ITYN LIDGFC  G+  KA  
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L   LKS G SPS+VTYN+L+  F + G++  A+ +V+EMEERGI PS+VTYTILID+F 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           RSD+MEKA ++   M++ G  PDV+TY VLIHG C+KG M EAS+LF SM E   EPN+V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +YN MI GYCKEG+SYRAL+LL EM EK L PN+ASY   I VLC++ K  EAE L+ +M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539

Query: 552 LKLGLKPSVSLYNILYRAKNN 572
           +  G+ PS S+ +++ RAKN+
Sbjct: 540 IDSGIDPSTSILSLISRAKND 560


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 319/573 (55%), Positives = 407/573 (71%), Gaps = 17/573 (2%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           M+QS +       L LI +M K+PP+K   LFN AS QGL HT  SIS IL  LLS   S
Sbjct: 1   MSQSHKA------LILIQKMVKVPPIKTLLLFNTASYQGLHHTSHSISFILNHLLS---S 51

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
                AQ+LIL++ISGRI      P SL+  LTQ   +S +  T + LY++I++A++ S 
Sbjct: 52  GMLPQAQSLILRLISGRI------PSSLMLQLTQAHFTSCS--TYTPLYDAIVNAYVHSH 103

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
            +DQAL + H M+  G  P SNTFN+LL  +I+S  FDK W  F+  + KV L+ YSFGI
Sbjct: 104 STDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGI 163

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I GCCEAG   + F +L  LEE G SPNVVIYT+LIDGCCKNGD+  AK LF K+  LG
Sbjct: 164 MITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLG 223

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           LV  QHTY+VL+ G FK GLQ++GF+ YE M  +G+ P+ Y YNCLI EYCN+G V + F
Sbjct: 224 LVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAF 283

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F EMR + +AC V+TYN LI GLC+  +  EA +L+ ++   G+SPN++TYN LI+GF
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CD G+ D A RLFNQLKS+G SP++VTYN LI  +SK  N   A DLV+EMEER I  S+
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSK 403

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILID+F R +  +KA EM+SLM+KSG  PDVYTY VLIHG C+ GNMKEASK F S
Sbjct: 404 VTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + E  L+PN V+YN MI GYCKEG+SYRALRLL EM   G+VPN+AS+ ST+G+LC+D K
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEK 523

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           W EAE+LL QM+  GLKPSVSLY ++++ K ++
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLYKMVHKVKGDV 556



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 172/363 (47%), Gaps = 17/363 (4%)

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM--------------QL 273
           +  +LF      GL  T H+ + ++  L  +G+         ++              Q 
Sbjct: 21  KTLLLFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQA 80

Query: 274 NGVSPSLYT--YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           +  S S YT  Y+ +++ Y +     +       M H   A    T+N L+C L +    
Sbjct: 81  HFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYF 140

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            +A  + + +K + +  N  ++  +I G C+AG   + FRL   L+  G SP+VV Y  L
Sbjct: 141 DKAWWIFNVLK-SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTL 199

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I    K G+  +A +L  +M+  G+ P++ TY++L++ F +     + F+MY  M +SG 
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGI 259

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ Y Y  LI   C  G + +A K+F  M E  +    + YN++I G C+      A++
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           L+ ++N+ GL PNI +Y+  I   C  GK   A  L NQ+   GL P++  YN L    +
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379

Query: 572 NIE 574
            +E
Sbjct: 380 KVE 382


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/503 (53%), Positives = 362/503 (71%), Gaps = 7/503 (1%)

Query: 69  LILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
            +   +S RITS  FT  S     TQ   +S +   + R  +++I+A  +S+L +Q+L  
Sbjct: 8   FVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPR--DAVINASFQSQLLEQSLDS 60

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
           F  M+  G  P S +FN+ L  + KS + D+ W FF+E   + + DVYSFGI IK  CE 
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCEN 120

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+++K FE+L Q+E MG SPNV IYT LI+ CC+NGDI++AK++F ++ +LGL A Q+ Y
Sbjct: 121 GNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T++I G FK G +KDGFE Y+KM+L GV P+LYTYN LI EYC +GK+S  FK+FDE+  
Sbjct: 181 TIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISK 240

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R VACN VTYN LI GLC++ +V +AE LL++MK A I+P   T+N L+DG C+ G+ DK
Sbjct: 241 RGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A     +LK  G  P++VTYN+LI  FSK GNS + S+LVREME+RGI+PS+VTYTIL++
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           +FVRSDD+EKA+EM+ LM++ G  PD +TYGVLIHGLC+KGNM EASKL+ SM E  L+P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           NDV+YN MI GYCKE NSY+AL+ L EM + G+ PN+ASY STI +LC+DGK  EA+ LL
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 549 NQMLKLGLKPSVSLYNILYRAKN 571
            +M + GLKP  SL + + +AK+
Sbjct: 481 KEMTEAGLKPPESLCSKVGQAKS 503


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/503 (53%), Positives = 362/503 (71%), Gaps = 7/503 (1%)

Query: 69  LILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
            +   +S RITS  FT  S     TQ   +S +   + R  +++I+A L+S+L +Q+L  
Sbjct: 8   FVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPR--DAVINASLQSQLLEQSLDG 60

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
           F  M+  G  P S +FN+ L  + KS + D+ W FF+E   + + DVYSF I IK  CE 
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCEN 120

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+++K FE+L Q+E MG SPNV IYT LI+ CC+NGDI++AK++F ++ +LGL A Q+ Y
Sbjct: 121 GNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T++I G FK G +KDGFE Y+KM+L GV P+LYTYN LI EYC +GK+S  FK+FDE+  
Sbjct: 181 TIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISK 240

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R VACN VTYN LI GLC++ +V +AE LL++MK A I+P   T+N L+DG C+ G+ DK
Sbjct: 241 RGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A     +LK  G  P++VTYN+LI  FSK GNS + S+LVREME+RGI+PS+VTYTIL++
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           +FVRSDD+EKA+EM+ LM++ G  PD +TYGVLIHGLC+KGNM EASKL+ SM E  L+P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           NDV+YN MI GYCKE NSY+AL+ L EM + G+ PN+ASY STI +LC+DGK  EA+ LL
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 549 NQMLKLGLKPSVSLYNILYRAKN 571
            +M + GLKP  SL + + +AK+
Sbjct: 481 KEMTEAGLKPPESLCSKVGQAKS 503


>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 585

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 294/594 (49%), Positives = 371/594 (62%), Gaps = 53/594 (8%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           M+QS +       L LI +M K+PP KA  LFN A+ QGL HTP SIS IL LLLS   S
Sbjct: 1   MSQSHEA------LILIQKMVKVPPPKALLLFNTATYQGLHHTPHSISFILNLLLS---S 51

Query: 61  HSHAAAQTLILKIISGRITSSSFT-----------PRSLLCHLTQLFPSSSNPVTKSRLY 109
                AQ+LIL++ISGRI SS  +           P  LL +  +   + S   T+S+ Y
Sbjct: 52  DMLLQAQSLILRLISGRIPSSMISPSSLMLQLIQPPFHLLSNTDRDSTAGSKGSTRSKKY 111

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPR---------------------------SN 142
           ++  +    + LS   L   H  +  G                               +N
Sbjct: 112 KAKTEG---NNLSPIWLAVTHAFMHQGTGTLETSLSSPSTSLFLEVLTLEVSKQALHVTN 168

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           TFN+LL  +I+S  FD  W  F+E + KV +D YSFGI+IKG CEAGDL K F +L  LE
Sbjct: 169 TFNNLLSLLIRSNCFDIAWWVFNEFKRKVVMDAYSFGIMIKGRCEAGDLMKGFRLLAMLE 228

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           E GFS NVVIYT+LI GCCK+GD+  AK LF  +  LGLVA  H+  VL+ G FK GLQ+
Sbjct: 229 EFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFKQGLQR 288

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +GF  YE M+ +G+ P+ Y YNC+I EYCN   V +   +F EMR + +A  V+TYN   
Sbjct: 289 EGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVITYNX-- 346

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLC+  +  EA +++ Q+   G+SPN++TYN LI+GFCD G+ D A RLFNQLKSNG S
Sbjct: 347 GGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLS 406

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P++VTYN LI  +SK  N   A DLV+EMEER I PS+VTY ILID+F R +  +K  EM
Sbjct: 407 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTYXILIDAFARLNYTKKTCEM 466

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +SLM+KSG   DV  + VLIHGLCM GNMKEASKL  S+ E  LEPN V+YN MI GYCK
Sbjct: 467 HSLMEKSGLVSDV-XHSVLIHGLCMNGNMKEASKLLKSLGELHLEPNSVIYNTMIHGYCK 525

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           EG+SYRALRL  EM    +VPN+AS+ STIG+LC+D KW EAE+LL Q L L L
Sbjct: 526 EGSSYRALRLFNEMVHSRMVPNVASFCSTIGLLCRDEKWQEAELLLGQFLSLSL 579



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 41/335 (12%)

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           EF  K+ ++      Y++  +I   C  G + +GF+L   +     + NVV Y TLI G 
Sbjct: 192 EFKRKVVMDA-----YSFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGC 246

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CK   V+ A++L   M   G+  N  +   L++GF   G   + F ++  +K +G  P+ 
Sbjct: 247 CKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFKQGLQREGFXMYENMKPSGIVPNA 306

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
             YN +I  +  A     A ++  EM E+GI    +TY        R     +A ++   
Sbjct: 307 YAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVITYNX--GGLCRGKKFGEAVKIVHQ 364

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           + K G SP++ TY +LI+G C  G +  A +LFN +    L P  V YN +I GY K  N
Sbjct: 365 VNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVEN 424

Query: 506 SYRALRLLGEMNEKGLVPNIASY----------------------------------SST 531
              AL L+ EM E+ + P+  +Y                                  S  
Sbjct: 425 LAGALDLVKEMEERCIPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGLVSDVXHSVL 484

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  LC +G   EA  LL  + +L L+P+  +YN +
Sbjct: 485 IHGLCMNGNMKEASKLLKSLGELHLEPNSVIYNTM 519



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 3/258 (1%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T+N L+  L +      A  + ++ K   +  +  ++  +I G C+AG+  K FRL   L
Sbjct: 169 TFNNLLSLLIRSNCFDIAWWVFNEFKRK-VVMDAYSFGIMIKGRCEAGDLMKGFRLLAML 227

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +  G S +VV Y  LI    K+G+ ++A  L   M+  G+  +  +  +L++ F +    
Sbjct: 228 EEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFKQGLQ 287

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            + F MY  M+ SG  P+ Y Y  +I   C    + +A  +F  M E  +    + YN  
Sbjct: 288 REGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVITYNXG 347

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             G C+      A++++ ++N+ GL PNI +Y+  I   C  GK   A  L NQ+   GL
Sbjct: 348 --GLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGL 405

Query: 557 KPSVSLYNILYRAKNNIE 574
            P++  YN L    + +E
Sbjct: 406 SPTLVTYNTLIAGYSKVE 423


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/498 (46%), Positives = 317/498 (63%), Gaps = 25/498 (5%)

Query: 20  MAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
           MAK PPLKA SLFN +  QG+  T QS+  I+  LL     +  +  Q+L+L+I+S RI+
Sbjct: 1   MAKSPPLKALSLFNSSINQGINPTHQSVFFIVHYLLK---FNLKSEVQSLLLQILSNRIS 57

Query: 80  SSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           S  FT  SLL +LT+   S   P   S LYESII  +++S   + A+ YF+QM+D G+  
Sbjct: 58  SPFFTVSSLLENLTEPI-SIPCPKISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVF 116

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             N FN+LL  ++KS  F+K W  F+E + K+ELDVY++GI+IKGCCEAG   K FE+L 
Sbjct: 117 EPNIFNTLLDSLVKSKCFEKLWFVFNEVKGKIELDVYTYGIMIKGCCEAGVFYKGFELLT 176

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            LE+MG SPNVVIYT+LIDGCCKNGD+ RAK+LF K+GE+ LVA Q+TYTVLI G FK G
Sbjct: 177 DLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFKKG 236

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           L+KDGFE +EKMQL+GV P+LYTYNC+I+E+CNEGK+ + ++LFDEM  R V  NVVTYN
Sbjct: 237 LRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYN 296

Query: 320 TLICGLCKEMRVQEAERLLDQMKMA---------------------GISPNVITYNKLID 358
           TLI GLC++ R+ EAE+L+DQMK A                     GISP+ +TY  L +
Sbjct: 297 TLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTN 356

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
                G+ +KAF  ++ ++  G  P V  Y VL+      GN K AS L R M E  + P
Sbjct: 357 AHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEP 416

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +EV Y  +I+ + ++ +  +A      M+     P+V +Y   I  LC  G  +EA  L 
Sbjct: 417 NEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILL 476

Query: 479 NSMWETKLEPNDVVYNMM 496
           N M  + LEP+  +YN++
Sbjct: 477 NKMRGSGLEPSVSIYNII 494


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/393 (47%), Positives = 267/393 (67%), Gaps = 1/393 (0%)

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++  C AGD+  A  +L +  + G +  +V   T+L++GCCK GD+  A+ +F ++  LG
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L   + TYT L+ G F +G ++ GF  +E+M+  GV P+LYTYNCLI E+C  G+     
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LFDEM  R +  NVV+YNTLI GLC+  ++ +A +LLD M+  G  P++IT+N L+DG+
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AG+   A   FNQ+K+ G  PS VTYN+LI  F +A +   A+  + +M+ERG+ P++
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILIDSF R + M KAFE+ + M+K+G   D +TYGVL+  LCM+GNMK+A KLF S
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  +EP++V+Y+MMI+GY +EG+SY+AL+L+ EM +KGL+PN ASY  TI VLC+D K
Sbjct: 309 MGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             EAE LL+ M++ GL+ S S+   L  AK  +
Sbjct: 369 CQEAEALLDDMVRAGLQTSESICQALLDAKARL 401



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 168/355 (47%), Gaps = 35/355 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG------------- 219
           LDV +   L+ GCC+ GD+ +A  V +++  +G +PN V YT+L+ G             
Sbjct: 36  LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95

Query: 220 -----------------C-----CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
                            C     C+ G+ ERA+ LF ++   G+V    +Y  LI GL +
Sbjct: 96  FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
           +G   D  +  + M+  G  PS+ T+N L+  Y   GK+S     F++M+      + VT
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN LI G C+   +  A R L  MK  G+ P  +TY  LID F       KAF +   ++
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G      TY VL+RA    GN K A  L + M E+G+ PS V Y ++I  + R     
Sbjct: 276 KAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSY 335

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           KA ++   M++ G  P+  +YG+ I  LC     +EA  L + M    L+ ++ +
Sbjct: 336 KALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESI 390



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 1/329 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A   F +M   G+ P   T+ +L+         +KG+  F E  R  VE ++Y++  LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C  G+  +A  + +++   G   NVV Y +LI G C++G +  A  L   +   G  
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +L+ G  K G   +   F+ +M+  G  PS  TYN LI  +C    ++   + 
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             +M+ R +    VTY  LI    +E  + +A  +L  M+ AG+  +  TY  L+   C 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A +LF  +   G  PS V Y+++I  + + G+S  A  L+ EM ++G+ P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           Y + I    + D  ++A  +   M ++G 
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDMVRAGL 384



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 5/339 (1%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           L   + N VT    Y +++  +      ++    F +M   GV P   T+N L+    ++
Sbjct: 66  LLGLAPNEVT----YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             F++    F E   + +  +V S+  LI G C  G L  A ++L+ +   G  P+++ +
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             L+DG  K G +  A   F ++   G   +  TY +LI G  +             M+ 
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P+  TY  LI  +  E  + + F++   M    +  +  TY  L+  LC E  +++
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A +L   M   G+ P+ + Y+ +I G+   G + KA +L  +++  G  P+  +Y + IR
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              K    + A  L+ +M   G+  SE     L+D+  R
Sbjct: 362 VLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKAR 400


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/371 (47%), Positives = 255/371 (68%), Gaps = 1/371 (0%)

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++  C AGD+  A  +L +  + G +  +V   T+L++GCCK GD+  A+ +F ++  LG
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L   + TYT L+ G F +G ++ GF  +E+M+  GV P+LYTYNCLI E+C  G+     
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LFDEM  R +  NVV+YNTLI GLC+  ++ +A +LLD M+  G  P++IT+N L+DG+
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AG+   A   FNQ+K+ G  PS VTYN+LI  F +A +   A+  + +M+ERG+ P++
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILIDSF R + M KAFE+ + M+K+G   D +TYGVL+  LCM+GNMK+A KLF S
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  +EP++V+Y+MMI+GY +EG+SY+AL+L+ EM +KGL+PN ASY  TI VLC+D K
Sbjct: 309 MGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368

Query: 541 WPEAEVLLNQM 551
             EAE LL+ M
Sbjct: 369 CQEAEALLDDM 379



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 141/289 (48%), Gaps = 1/289 (0%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDE-MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           T    +   C  G V     +     +  + A +V     L+ G CK   V EA R+ D+
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M + G++PN +TY  L+ G+   G+ +K F LF +++  G  P++ TYN LI  + + G 
Sbjct: 64  MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE 123

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L  EM  RGI  + V+Y  LI    R   +  A ++  +M+  G  P + T+ +
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ G    G M  A   FN M     +P+ V YNM+I G+C+  +  RA R L +M E+G
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L P   +Y+  I    ++    +A  +L  M K GL+     Y +L RA
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRA 292



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 1/325 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A   F +M   G+ P   T+ +L+         +KG+  F E  R  VE ++Y++  LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C  G+  +A  + +++   G   NVV Y +LI G C++G +  A  L   +   G  
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +L+ G  K G   +   F+ +M+  G  PS  TYN LI  +C    ++   + 
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             +M+ R +    VTY  LI    +E  + +A  +L  M+ AG+  +  TY  L+   C 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A +LF  +   G  PS V Y+++I  + + G+S  A  L+ EM ++G+ P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y + I    + D  ++A  +   M+
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 139/305 (45%), Gaps = 1/305 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++  +      ++    F +M   GV P   T+N L+    ++  F++    F E  
Sbjct: 76  YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +V S+  LI G C  G L  A ++L+ +   G  P+++ +  L+DG  K G + 
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F ++   G   +  TY +LI G  +             M+  G+ P+  TY  LI
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  E  + + F++   M    +  +  TY  L+  LC E  +++A +L   M   G+ 
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + Y+ +I G+   G + KA +L  +++  G  P+  +Y + IR   K    + A  L
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEAL 375

Query: 408 VREME 412
           + +ME
Sbjct: 376 LDDME 380


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/371 (47%), Positives = 255/371 (68%), Gaps = 1/371 (0%)

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++  C AGD+  A  +L +  + G +  +V   T+L++GCCK GD+  A+ +F ++  LG
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L   + TYT L+ G F +G ++ GF  +E+M+  GV P+LYTYNCLI E+C  G+     
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LFDEM  R +  NVV+YNTLI GLC+  ++ +A +LLD M+  G  P++IT+N L+DG+
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AG+   A   FNQ+K+ G  PS VTYN+LI  F +A +   A+  + +M+ERG+ P++
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILIDSF R + M KAFE+ + M+K+G   D +TYGVL+  LCM+GNMK+A KLF S
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  +EP++V+Y+MMI+GY +EG+SY+AL+L+ EM +KGL+PN ASY  TI VLC+D K
Sbjct: 309 MGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368

Query: 541 WPEAEVLLNQM 551
             EAE LL+ M
Sbjct: 369 CQEAEALLDDM 379



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 141/289 (48%), Gaps = 1/289 (0%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDE-MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           T    +   C  G V     +     +  + A +V     L+ G CK   V EA R+ D+
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M + G++PN +TY  L+ G+   G+ +K F LF +++  G  P++ TYN LI  + + G 
Sbjct: 64  MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE 123

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L  EM  RGI  + V+Y  LI    R   +  A ++  +M+  G  P + T+ +
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ G    G M  A   FN M     +P+ V YNM+I G+C+  +  RA R L +M E+G
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L P   +Y+  I    ++    +A  +L  M K GL+     Y +L RA
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRA 292



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 1/325 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A   F +M   G+ P   T+ +L+         +KG+  F E  R  VE ++Y++  LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C  G+  +A  + +++   G   NVV Y +LI G C++G +  A  L   +   G  
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +L+ G  K G   +   F+ +M+  G  PS  TYN LI  +C    ++   + 
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             +M+ R +    VTY  LI    +E  + +A  +L  M+ AG+  +  TY  L+   C 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A +LF  +   G  PS V Y+++I  + + G+S  A  L+ EM ++G+ P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y + I    + D  ++A  +   M+
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 5/319 (1%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           L   + N VT    Y +++  +      ++    F +M   GV P   T+N L+    ++
Sbjct: 66  LLGLAPNEVT----YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             F++    F E   + +  +V S+  LI G C  G L  A ++L+ +   G  P+++ +
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             L+DG  K G +  A   F ++   G   +  TY +LI G  +             M+ 
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P+  TY  LI  +  E  + + F++   M    +  +  TY  L+  LC E  +++
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A +L   M   G+ P+ + Y+ +I G+   G + KA +L  +++  G  P+  +Y + IR
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361

Query: 394 AFSKAGNSKMASDLVREME 412
              K    + A  L+ +ME
Sbjct: 362 VLCKDDKCQEAEALLDDME 380


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 263/392 (67%), Gaps = 1/392 (0%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           + ++    AG++  A  +L +  + G +  +V   T+L+ G C++GD+  A+ +F  +  
Sbjct: 7   VAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPR 66

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           LGL   + T+T LI G F +G ++ G   +EKM++ G+ P+LYTYN L+ E+C  G+   
Sbjct: 67  LGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFER 126

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              LF+EM  + +  NVV+YNTLI GLC+  ++++A +LL+ M+  GI P+V+T+N L+D
Sbjct: 127 ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD 186

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+  AG+   A    NQ++  G  PS VTYN LI  F +A +   A+    +M+ERG+ P
Sbjct: 187 GYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAP 246

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           ++VTYTILID+F R +DM+KAFEM++ M+K+G   DV TYGVL+H LCM+GNMK+A KLF
Sbjct: 247 TKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLF 306

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
            S+ E  L+  +V+Y+M+I+GY +EG+SY+A++L+ EM +KG VPN ASY  TI +LC D
Sbjct: 307 QSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCND 366

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           GK  EAE L++ M++ G++ S S+  +L  AK
Sbjct: 367 GKCSEAEALIDDMVRAGVQTSESVRQVLLNAK 398



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 35/368 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG------------- 219
           LDV +   L+ G C +GD+ +A  V + +  +G +PN V +T+LI G             
Sbjct: 36  LDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLAL 95

Query: 220 ----------------------CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
                                  C+ G+ ERA++LF ++   G+     +Y  LI GL +
Sbjct: 96  FEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR 155

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
               KD  +  E M+  G+ PS+ T+N L+  Y   GK+S      ++MR      + VT
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN LI G C+   +  A R    MK  G++P  +TY  LID F    + DKAF +F  ++
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    V TY VL+ A    GN K A  L + + E+G+    V Y +LI  + R     
Sbjct: 276 KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSY 335

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           KA ++   M+K GF P+  +YG+ I  LC  G   EA  L + M    ++ ++ V  +++
Sbjct: 336 KAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLL 395

Query: 498 FGYCKEGN 505
               ++G+
Sbjct: 396 NAKARQGS 403



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 1/361 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +++  + +S    +A   F  M   G+ P   TF +L+         +KG   F + R  
Sbjct: 43  ALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIG 102

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +E ++Y++ IL+   C  G+  +A  +  ++   G + NVV Y +LI G C+   ++ A
Sbjct: 103 GIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDA 162

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L   +   G+  +  T+ +L+ G  K G   +   F  +M++ G  PS  TYN LI  
Sbjct: 163 TQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAG 222

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C    +    + F +M+ R +A   VTY  LI    +E  + +A  +   M+ AG+  +
Sbjct: 223 FCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVD 282

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V TY  L+   C  G    A +LF  +   G     V Y++LI  + + G+S  A  L+ 
Sbjct: 283 VRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIM 342

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM ++G  P+  +Y + I          +A  +   M ++G         VL++    +G
Sbjct: 343 EMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQG 402

Query: 470 N 470
           +
Sbjct: 403 S 403



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 5/335 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N VT    + ++I  +      ++ L  F +M   G+ P   T+N L+    ++  F+
Sbjct: 70  TPNEVT----FTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFE 125

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +  L F E   K +  +V S+  LI G C    +  A ++L  +   G  P+VV +  L+
Sbjct: 126 RARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLV 185

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  K G +  A     ++   G   +  TY  LI G  +          +  M+  G++
Sbjct: 186 DGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLA 245

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  LI  +  E  + + F++F  M    +  +V TY  L+  LC E  +++A +L
Sbjct: 246 PTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKL 305

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              +   G+    + Y+ LI G+   G + KA +L  +++  G  P+  +Y + IR    
Sbjct: 306 FQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCN 365

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            G    A  L+ +M   G+  SE    +L+++  R
Sbjct: 366 DGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKAR 400



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 1/193 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I    ++R   +A   F  M + G+ P   T+  L+    +    DK + +F    
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E+DV ++G+L+   C  G++  A ++   + E G     VIY  LI G  + G   
Sbjct: 276 KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSY 335

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  ++ + G V    +Y + I  L  +G   +     + M   GV  S      L+
Sbjct: 336 KAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLL 395

Query: 288 HEYCNEGKVSEGF 300
           +    +G  ++ F
Sbjct: 396 NAKARQGSPTDDF 408


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 256/394 (64%), Gaps = 1/394 (0%)

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++  C A ++  A  VL +  + G +  +V   T+L+ GCC++GD+  A+ +F  +  LG
Sbjct: 9   VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +   + TYT LI G F  G ++ GF    +M+  GV P+LYTYNCL+ E+C  G+     
Sbjct: 69  VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSAR 128

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LFDEM  + V  NVV+YN LI GLC+  ++++A +L + M+  GI P+++T+N LIDG+
Sbjct: 129 LLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGY 188

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AG+   A   FNQ+K+ G  PSVVTYN LI  F +A +   A     +M+ER + P++
Sbjct: 189 GKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTK 248

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILI +F + ++M++AFEM S M+K+G   DV +YGVL+H LCM+G M  A KLF S
Sbjct: 249 VTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQS 308

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    ++PN+V+Y+MMI+GY +EG+SY+ALRL+ EM + GL+PN+ASY  TI +LC +GK
Sbjct: 309 MDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGK 368

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             EAE L+  M   GL+ S S+  +L+ AK  + 
Sbjct: 369 CQEAEALIGDMEDAGLQTSESICRVLFDAKARLH 402



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 176/355 (49%), Gaps = 35/355 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG------------- 219
           LDV +   L+ GCC++GD+ +A  V + +  +G +PN V YT+LI G             
Sbjct: 36  LDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFAL 95

Query: 220 -----------------C-----CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
                            C     C+ G+ + A++LF ++   G+V    +Y +LI GL +
Sbjct: 96  VGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCR 155

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
           +G  KD  + +E M+  G+ PS+ T+N LI  Y   GK+S     F++M+   +  +VVT
Sbjct: 156 HGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVT 215

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN LI G C+   +  A R    MK   ++P  +TY  LI  F    E D+AF + ++++
Sbjct: 216 YNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEME 275

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    V +Y VL+ A    G    A  L + M+ +G+ P+ V Y ++I  + R     
Sbjct: 276 KAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSY 335

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           KA  +   M+KSG  P+V +Y + I  LC +G  +EA  L   M +  L+ ++ +
Sbjct: 336 KALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESI 390



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 159/329 (48%), Gaps = 1/329 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A   F  M   GV P   T+ +L+         + G+    E  R  VE ++Y++  L+
Sbjct: 56  EARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLV 115

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C  G+   A  + +++   G   NVV Y  LI G C++G ++ A  LF  +   G+ 
Sbjct: 116 GEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIH 175

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +LI G  K G   +   F+ +M+  G+ PS+ TYN LI  +C    ++   + 
Sbjct: 176 PSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRA 235

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F +M+ R +A   VTY  LI    KE  +  A  +L +M+ AG+  +V +Y  L+   C 
Sbjct: 236 FSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCM 295

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+   A +LF  + S G  P+ V Y+++I  + + G+S  A  L+ EM + G+ P+  +
Sbjct: 296 EGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           Y + I         ++A  +   M+ +G 
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIGDMEDAGL 384



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 5/335 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N VT    Y ++I  +      +       +M   GV P   T+N L+    ++  F 
Sbjct: 70  TPNEVT----YTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFK 125

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
              L F E   K V  +V S+ ILI G C  G L  A ++   +   G  P++V +  LI
Sbjct: 126 SARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLI 185

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  K G +  A   F ++   GL  +  TY  LI G  +          +  M+   ++
Sbjct: 186 DGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLA 245

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  LI  +  E ++   F++  EM    +  +V +Y  L+  LC E ++  A +L
Sbjct: 246 PTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKL 305

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              M   G+ PN + Y+ +I G+   G + KA RL  +++ +G  P+V +Y + IR    
Sbjct: 306 FQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCN 365

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            G  + A  L+ +ME+ G+  SE    +L D+  R
Sbjct: 366 EGKCQEAEALIGDMEDAGLQTSESICRVLFDAKAR 400



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 131/278 (47%), Gaps = 1/278 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIK 183
           A   F +M   GV     ++N L+  + +     D   LF +  R  +   + +F +LI 
Sbjct: 127 ARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLID 186

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G  +AG ++ A    NQ++  G  P+VV Y  LI G C+  DI  A   F  + E  L  
Sbjct: 187 GYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAP 246

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           T+ TYT+LI    K       FE   +M+  G+   + +Y  L+H  C EGK+    KLF
Sbjct: 247 TKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLF 306

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M  + V  N V Y+ +I G  +E    +A RL+ +M+ +G+ PNV +Y   I   C+ 
Sbjct: 307 QSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNE 366

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           G+  +A  L   ++  G   S     VL  A ++  +S
Sbjct: 367 GKCQEAEALIGDMEDAGLQTSESICRVLFDAKARLHSS 404


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 173/399 (43%), Positives = 257/399 (64%), Gaps = 1/399 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDIERAKMLFRK 235
           S   +++  C A ++  A  VL +  + G +  +V   T+L+  CC++GD+  A+ +F  
Sbjct: 4   STAAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDV 63

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +  LG+   + TYT LI G F  G ++ GF  + +M+ +GV P+LYTYNCLI E+C  G+
Sbjct: 64  MPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGE 123

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
                 LFDEM  + V  NVV+YN LI GLC+  ++++A +L + M+  GI P+++T+N 
Sbjct: 124 FKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNL 183

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG+  AG+   A   FNQ+K+ G  PSVVTYN LI  F +  +   A     +M+ERG
Sbjct: 184 LIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERG 243

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P++VTYTILI +F + ++M++AF M S M+K+G   DV +YGVL+H LCM+G M  A 
Sbjct: 244 LAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHAR 303

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           KLF SM    ++PN V+Y+MMI+GY +EG+SY+ALRL+ EM + GL+PN+ASY  TI +L
Sbjct: 304 KLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLL 363

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           C +GK  EAE L++ M   GL+ S ++  IL  AK  + 
Sbjct: 364 CNEGKCQEAEALIDDMEHAGLQTSETICRILLDAKARLH 402



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 156/335 (46%), Gaps = 5/335 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N VT    Y ++I+ +      +     F +M   GV P   T+N L+    ++  F 
Sbjct: 70  APNEVT----YTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFK 125

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
              L F E   K V  +V S+ ILI G C    L  A ++   +   G  P++V +  LI
Sbjct: 126 SARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLI 185

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  K G +  A   F ++   GL  +  TY  LICG  +          +  M+  G++
Sbjct: 186 DGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLA 245

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  LI  +  E ++   F +  EM    +  +V +Y  L+  LC E ++  A +L
Sbjct: 246 PTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKL 305

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              M + G+ PN + Y+ +I G+   G + KA RL  +++ NG  P+V +Y + IR    
Sbjct: 306 FQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCN 365

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            G  + A  L+ +ME  G+  SE    IL+D+  R
Sbjct: 366 EGKCQEAEALIDDMEHAGLQTSETICRILLDAKAR 400



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 159/329 (48%), Gaps = 1/329 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A   F  M   GV P   T+ +L+         + G+  F+E  R  VE ++Y++  LI
Sbjct: 56  EARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLI 115

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C  G+   A  + +++   G   NVV Y  LI G C++  ++ A  LF  +   G+ 
Sbjct: 116 GEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIR 175

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +LI G  K G   +   F+ +M+  G+ PS+ TYN LI  +C    ++   + 
Sbjct: 176 PSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRA 235

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F +M+ R +A   VTY  LI    KE  +  A  +L +M+ AG+  +V +Y  L+   C 
Sbjct: 236 FLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCM 295

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+   A +LF  +   G  P+ V Y+++I  + + G+S  A  L+ EM + G+ P+  +
Sbjct: 296 EGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVAS 355

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           Y + I         ++A  +   M+ +G 
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIDDMEHAGL 384


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 180/557 (32%), Positives = 282/557 (50%), Gaps = 18/557 (3%)

Query: 29  FSLFNWASRQGLQH----TPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRITSSSF 83
            +   WA  Q   H    TP    + L +L+  K+   +H+ A  L         T    
Sbjct: 57  LNFLTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTAHSLAADLA-------ATLPDP 109

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           T  SL  HL   F   S+P + S +++ ++ +  +     +AL   H     G  P   +
Sbjct: 110 TGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLS 169

Query: 144 FNSLLIFVIKSCS-----FDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           +N++L  +++  S     +D     F +  R  V  +VY++ ++I+G    GDL K    
Sbjct: 170 YNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGF 229

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           + ++E+ G SPNVV Y +LID  CK   ++ A  L R +   G+ A   +Y  +I GL  
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G   +  E  E+M+  G+ P   TYN L++ +C EG + +G  L  EM  + ++ NVVT
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y TLI  +CK   +  A  + DQM++ G+ PN  TY  LIDGFC  G  ++A+++ +++ 
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            +G SPSVVTYN L+  +   G  + A  ++R M ERG+ P  V+Y+ +I  F R  ++ 
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           KAF+M   M + G  PD  TY  LI GLC++  + EA  LF  M    L P++V Y  +I
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             YC +G   +ALRL  EM ++G +P+  +YS  I  L +  +   A+ LL ++      
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 558 PSVSLYNILYRAKNNIE 574
           P    YN L    +N E
Sbjct: 590 PDDVTYNTLIENCSNNE 606



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 280/573 (48%), Gaps = 35/573 (6%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSH--SHAAAQTL 69
           L +  +SR+  +P  KA +L + A+R G   T  S + +L  LL + SS+   +  A+ +
Sbjct: 137 LVVKSLSRLGFVP--KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 70  ILKIISGRITSSSFTPRSL-------------LCHLTQLFPSSSNPVTKSRLYESIIDAH 116
              ++   ++ + +T   +             L  + ++     +P   +  Y ++IDA 
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVT--YNTLIDAS 252

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
            K +   +A+     M   GV     ++NS++  +       +      E R K +  D 
Sbjct: 253 CKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDE 312

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  L+ G C+ G+L++   +L+++   G SPNVV YT+LI+  CK G++ RA  +F +
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   GL   + TYT LI G  + GL  + ++   +M ++G SPS+ TYN L+H YC  G+
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E   +   M  R +  +VV+Y+T+I G C+E  + +A ++ ++M   G+ P+ +TY+ 
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI G C   +  +AF LF ++   G  P  VTY  LI A+   G    A  L  EM +RG
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH------------ 463
             P  VTY++LI+   +    + A  +   +      PD  TY  LI             
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEG 612

Query: 464 ---GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
              G CMKG M EA ++F +M +   +PN  +YN+MI G+ + GN ++A  L  E+    
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
              +  +  + +  L ++G   E   LL  +L+
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILR 705



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 20/412 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++I+   K+    +A+  F QM   G+RP   T+ +L+    +    +
Sbjct: 344 SPNVVT----YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           + +   SE         V ++  L+ G C  G + +A  +L  + E G  P+VV Y+++I
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C+  ++ +A  +  ++ E G++    TY+ LI GL       + F+ + +M   G+ 
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P   TY  LI+ YC +G++S+  +L DEM  R    + VTY+ LI GL K+ R + A+RL
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRL 579

Query: 338 LDQMKMAGISPNVITYNKLID---------------GFCDAGETDKAFRLFNQLKSNGQS 382
           L ++      P+ +TYN LI+               GFC  G  ++A R+F  +      
Sbjct: 580 LLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHK 639

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+   YN++I   S+ GN   A +L  E+E        V    L+ +  R    ++   +
Sbjct: 640 PNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRL 699

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
              + +S    D     VL+     +GNM     +   M +  L P+  +++
Sbjct: 700 LQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/509 (33%), Positives = 263/509 (51%), Gaps = 17/509 (3%)

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFPSSSN---------PVTKSRL-------YESIIDA 115
           K ++  + S S +P+S L  L Q   S             +T+ RL       ++ +I A
Sbjct: 116 KCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRA 175

Query: 116 HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELD 174
             + +  D A   F  M + GV P+  TFN++L   +K    +  W+ ++E  R K++  
Sbjct: 176 CCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKST 235

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           VY+F I+I   C+ G L KA + +  +E +G  PNVV Y ++I G C  G +E A+M+  
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +   G+    +TY  LI G+ K G  ++     EKM+  G+ P+  TYN LI  YCN+G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + + F   DEM  R +   V TYN LI  L  E ++ EA+ ++  M  +GI P+ ITYN
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+G+C  G   KAF L +++ S G  P++VTY  LI   SK    K A DL  ++   
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G +P  + +  LID    + ++++AF +   M K    PD  TY  L+ G C +G ++EA
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +L   M    + P+ + YN +I GY K G+   A  +  EM   G  P + +Y++ I  
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           LC++ +   AE LL +M+  G+ P  S Y
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTY 624



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 219/389 (56%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +LI+ CCE    + AFE  + ++E G  P +  + +++    K    E   +L+ ++ 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
            L + +T +T+ ++I  L K G  K   +F   M+  GV P++ TYN +IH YC+ G+V 
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               + D M++R V  +  TY +LI G+CK  +++EA  +L++MK  G+ P  +TYN LI
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           DG+C+ G+  KAF   +++      P+V TYN+LI A    G    A  ++++M + GI 
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  +TY ILI+ + R  + +KAF ++  M   G  P + TY  LI+ L  +  MK A  L
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  +      P+ +++N +I G+C  GN  RA  LL EM+++ +VP+  +Y++ +   C+
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +GK  EA  LL +M + G++P    YN L
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTL 557



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 198/388 (51%), Gaps = 3/388 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGIL 181
           +A  +   M + GV+P   T+N+++         +   +     +NR  VE D Y++G L
Sbjct: 254 KAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR-GVEPDSYTYGSL 312

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G L +A  +L +++E+G  P  V Y +LIDG C  GD+ +A     ++    +
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + T  TY +LI  LF  G   +     + M  +G+ P   TYN LI+ YC  G   + F 
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFN 432

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L DEM  + +   +VTY +LI  L K  R++ A+ L +++   G SP++I +N LIDG C
Sbjct: 433 LHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHC 492

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G  D+AF L  ++      P  VTYN L++   + G  + A +L++EM+ RGI P  +
Sbjct: 493 ANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHI 552

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y  LI  + +  D+  AF +   M   GF+P + TY  LI GLC       A +L   M
Sbjct: 553 SYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEM 612

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRA 509
               + P+D  Y  +I G  K  +S  A
Sbjct: 613 VSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 35/325 (10%)

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           + S   ++ LI   C   +  + F+ FD M+ + V   + T+N ++    K  + +    
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF- 395
           L  +M    I   V T+N +I+  C  G+  KA      +++ G  P+VVTYN +I  + 
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282

Query: 396 ----------------------------------SKAGNSKMASDLVREMEERGITPSEV 421
                                              K G  + AS ++ +M+E G+ P+ V
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  LID +    D+ KAF     M +    P V TY +LIH L ++G M EA  +   M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            ++ + P+ + YN++I GYC+ GN+ +A  L  EM  KG+ P + +Y+S I VL +  + 
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A+ L  ++++ G  P + ++N L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNAL 487



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 1/299 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++ID +       +A  Y  +M+   + P  +T+N L+  +      D+   +     
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  ++ ILI G C  G+  KAF + +++   G  P +V YTSLI    K   ++
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF KI   G       +  LI G   NG     F   ++M    + P   TYN L+
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLM 523

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EGKV E  +L  EM+ R +  + ++YNTLI G  K   + +A  + D+M   G +
Sbjct: 524 QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFN 583

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           P ++TYN LI G C   + D A  L  ++ S G +P   TY  LI    K  +S  ASD
Sbjct: 584 PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 161/474 (33%), Positives = 250/474 (52%), Gaps = 3/474 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS---CSFDKG 160
           + S +++ ++ ++    + DQA+   +    SG  P   ++NS+L  +++S         
Sbjct: 140 SSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAE 199

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            ++    R +V  +VY++ ILI+G C  G+L K      ++E  G  PNVV Y +LID  
Sbjct: 200 EVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAY 259

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G I+ A  L + +   G+     +Y V+I GL + G  K+ +E  E+M   G +P  
Sbjct: 260 CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TYN L++ YC EG   +   +  EM    V+ +VVTY  LI  +CK   +  A    DQ
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M++ G+ PN  TY  LIDGF   G  ++A+R+ N++  +G SPSVVTYN  I        
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  +V+EM E+G+ P  V+Y+ +I  F R  ++++AF+M   M + G SPD  TY  
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC    + EA  L   M +  L P++  Y  +I  YC EG+  +AL L  EM  KG
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            +P+  +YS  I  L +  +  EA+ LL +++     PS   Y+ L    +NIE
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 613



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 242/476 (50%), Gaps = 51/476 (10%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCE 187
           F +M  +G  P   T+N+L+    K    D+ + L  S +   ++ ++ S+ ++I G C 
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G + +A+E+L ++   GF+P+ V Y +L++G CK G+  +A ++  ++   G+  +  T
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI  + K        EF+++M++ G+ P+  TY  LI  +  +G ++E +++ +EM 
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
               + +VVTYN  I G C   R++EA  ++ +M   G++P+V++Y+ +I GFC  GE D
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +AF++  ++   G SP  VTY+ LI+   +      A DL +EM + G+ P E TYT LI
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL---------------------- 465
           +++    D+ KA  ++  M   GF PD  TY VLI+GL                      
Sbjct: 537 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 596

Query: 466 ----------------------------CMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
                                       CMKG M EA ++F SM E   +P + VYN++I
Sbjct: 597 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 656

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            G+C+ GN  +A  L  EM   G VP+  +  + I  L ++G   E   ++   L+
Sbjct: 657 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 712



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 221/502 (44%), Gaps = 86/502 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++IDA+ K    D+A      M   G++P   ++N ++  + +  S  + W    E  
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 311

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    D  ++  L+ G C+ G+ ++A  +  ++   G SP+VV YT+LI+  CK  ++ 
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA   F ++   GL   + TYT LI G  + GL  + +    +M  +G SPS+ TYN  I
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 288 HE-----------------------------------YCNEGKVSEGFKLFDEMRHREVA 312
           H                                    +C +G++   F++  EM  + V+
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTY++LI GLC+  R+ EA  L  +M   G+ P+  TY  LI+ +C  G+ +KA  L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS--- 429
            +++   G  P  VTY+VLI   +K   ++ A  L+ ++      PS+VTY  LI++   
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 611

Query: 430 ------------FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                       F     M +A  ++  M +    P    Y V+IHG C  GN+ +A  L
Sbjct: 612 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 671

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEG----------NSYRALRL--------------- 512
           +  M  +   P+ V    +I    KEG          ++ R+ RL               
Sbjct: 672 YKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHK 731

Query: 513 ----------LGEMNEKGLVPN 524
                     L +M + GL+PN
Sbjct: 732 EGNMEAVLNVLTDMAKDGLLPN 753


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 166/518 (32%), Positives = 264/518 (50%), Gaps = 3/518 (0%)

Query: 58  MSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHL 117
           M+  SHA      L+++   I S  ++ R +   L          +    LY+ +I A  
Sbjct: 75  MAVISHAPNSKPSLQLLKETINSGVYSIREVFNELG--VARGVLGIKTYVLYDLLIRACC 132

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVY 176
           + +  D A   F  M   GV P  +  N +L   +KS   +K W+ ++E  R +++  V 
Sbjct: 133 ELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVV 192

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F I+I   C+ G L KA E +  +E +G  PNVV Y ++I G C  G +E A+M+F  +
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+    +TY   I G+ K G  ++     EKM+  G+ P+  TYN LI  YCN+G +
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              F   D+M    +   V TYN LI  L  + ++ EA+ ++ +M   G+ P+ +TYN L
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+G+C  G   KAF L +++ S G  P+ VTY  LI   SK G  K A DL  ++  +GI
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  + +  LID    + +M++AF M   M +    PD  T+  L+ G C +G ++ A +
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   M    ++P+ + YN +I GY K G+   A R+  EM   G  P + +Y++ I  LC
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLC 552

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           ++ +   AE LL +M+  G+ P+ + Y  L     N+E
Sbjct: 553 KNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 274/523 (52%), Gaps = 9/523 (1%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           +LL+++ S     A  L+ +++  RI     T R L   LT         V  S +++ +
Sbjct: 112 VLLARLPSPK--LALQLLKQVMGTRIA----TNRELFDELT--LSRDRLSVKSSIVFDLL 163

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKV 171
           +    + R +D+A   F+ M + G+ P+  T N +L   +K    +  W+ ++E  R ++
Sbjct: 164 VRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRI 223

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
              VY+F I++   C+ G L KA E +  +E +GF PNVV Y ++I G    G+IE A+ 
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +   +   G+    +TY  LI G+ K G  ++    ++KM   G+ P+  TYN LI  YC
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N+G +   F   DEM  + +  +V TYN L+  L  E R+ EA+ ++ +M+  GI P+ I
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN LI+G+   G   KAF L N++ S G  P+ VTY  LI   S+    K A DL  ++
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            ++G++P  + +  ++D    + ++E+AF +   M +    PD  T+  L+ G C +G +
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           +EA  L + M    ++P+ + YN +I GY + G+   A R+  EM   G  P + +Y++ 
Sbjct: 524 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 583

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           I  LC++ +   AE LL +M+  G+ P  S Y  L     N++
Sbjct: 584 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVD 626



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 180/332 (54%), Gaps = 1/332 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y S+I    K    ++A   F +M++ G+ P + T+N+L+         ++ + +  
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   K +   V ++ +L+      G + +A +++ ++ + G  P+ + Y  LI+G  + G
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 416

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + ++A  L  ++   G+  T  TYT LI  L +    K+  + +EK+   GVSP +  +N
Sbjct: 417 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 476

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++  +C  G V   F L  EM  + V  + VT+NTL+ G C+E +V+EA  LLD+MK  
Sbjct: 477 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 536

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI P+ I+YN LI G+   G+   AFR+ +++ S G +P+++TYN LI+   K     +A
Sbjct: 537 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 596

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            +L++EM  +GI+P + TY  LI+     D +
Sbjct: 597 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 274/523 (52%), Gaps = 9/523 (1%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           +LL+++ S     A  L+ +++  RI     T R L   LT         V  S +++ +
Sbjct: 134 VLLARLPSPK--LALQLLKQVMGTRIA----TNRELFDELT--LSRDRLSVKSSIVFDLL 185

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKV 171
           +    + R +D+A   F+ M + G+ P+  T N +L   +K    +  W+ ++E  R ++
Sbjct: 186 VRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRI 245

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
              VY+F I++   C+ G L KA E +  +E +GF PNVV Y ++I G    G+IE A+ 
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +   +   G+    +TY  LI G+ K G  ++    ++KM   G+ P+  TYN LI  YC
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N+G +   F   DEM  + +  +V TYN L+  L  E R+ EA+ ++ +M+  GI P+ I
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN LI+G+   G   KAF L N++ S G  P+ VTY  LI   S+    K A DL  ++
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            ++G++P  + +  ++D    + ++E+AF +   M +    PD  T+  L+ G C +G +
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           +EA  L + M    ++P+ + YN +I GY + G+   A R+  EM   G  P + +Y++ 
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 605

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           I  LC++ +   AE LL +M+  G+ P  S Y  L     N++
Sbjct: 606 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVD 648



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 180/332 (54%), Gaps = 1/332 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y S+I    K    ++A   F +M++ G+ P + T+N+L+         ++ + +  
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   K +   V ++ +L+      G + +A +++ ++ + G  P+ + Y  LI+G  + G
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 438

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + ++A  L  ++   G+  T  TYT LI  L +    K+  + +EK+   GVSP +  +N
Sbjct: 439 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 498

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++  +C  G V   F L  EM  + V  + VT+NTL+ G C+E +V+EA  LLD+MK  
Sbjct: 499 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 558

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI P+ I+YN LI G+   G+   AFR+ +++ S G +P+++TYN LI+   K     +A
Sbjct: 559 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 618

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            +L++EM  +GI+P + TY  LI+     D +
Sbjct: 619 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 164/477 (34%), Positives = 256/477 (53%), Gaps = 10/477 (2%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           + S +++ ++ ++ +  L D+AL   H     G  P   ++N++L   I+S    K  + 
Sbjct: 132 STSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRS----KRNIS 187

Query: 164 FSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           F+EN      + +V  +V+++ ILI+G C AG+L+ A    +++E+ G  PNVV Y +LI
Sbjct: 188 FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLI 247

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK   I+    L R +   GL     +Y V+I GL + G  K+      +M   G S
Sbjct: 248 DGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYS 307

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
               TYN LI  YC EG   +   +  EM    ++ +V+TY +LI  +CK   +  A   
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           LDQM++ G+ PN  TY  L+DGF   G  ++A+R+  ++  NG SPSVVTYN LI     
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AG    A  ++ +M+E+G+TP  V+Y+ ++  F RS D+++A  +   M   G  PD  T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G C +   KEA  LF+ M    L P++  Y  +I  YC EG+  +A++L  EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           EKG++P++ +YS  I  L +  +  EA+ LL ++      PS   Y+ L    +NIE
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 234/461 (50%), Gaps = 16/461 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID + K R  D        M   G+ P   ++N ++  + +     +     +E N
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +    LD  ++  LIKG C+ G+ ++A  +  ++   G SP+V+ YTSLI   CK G++ 
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA     ++   GL   + TYT L+ G  + G   + +   ++M  NG SPS+ TYN LI
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  GK+ +   + ++M+ + +  +VV+Y+T++ G C+   V EA R+  +M   GI 
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIK 482

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY+ LI GFC+   T +A  LF+++   G  P   TY  LI A+   G+ + A  L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL 542

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH---- 463
             EM E+G+ P  VTY++LI+   +     +A  +   +      P   TY  LI     
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 464 -----------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
                      G CMKG M EA ++F SM E   +P+   YN+MI G+C+ G+  +A  L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSL 662

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             EM + G + +  +  + +  L ++GK  E   ++  +L+
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 281/551 (50%), Gaps = 23/551 (4%)

Query: 41  QHTPQSISIILRLLLSKMSSHSHA---AAQTLIL-------------KIISGRITSSSFT 84
           +H PQ   ++L LL S + +H H+   A  +L +              +I   I S + T
Sbjct: 71  RHNPQ---LVLHLL-SHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCT 126

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
            R++   L             + +++ ++ A+ + +  ++AL  F+ + + G  P   T 
Sbjct: 127 NRTIFDELA--LARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETC 184

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N +L   +K       W+ ++E  R  +   +Y+F I+I   C+ G L KA E +  +E 
Sbjct: 185 NQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMET 244

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           +G  PNVV Y ++I G C  G  +RA+++F+ + + GL    +TY   I GL K G  ++
Sbjct: 245 LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEE 304

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                 KM   G+ P+  TYN LI  YCN+G + + +   DEM  + +  ++VTYN  I 
Sbjct: 305 ASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIH 364

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            L  E R+ +A+ ++ +M+  G+ P+ +T+N LI+G+C  G+  +AF L +++   G  P
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           ++VTY  LI    K    K A  L  ++++ G+ P  + +  LID    + ++++AF++ 
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M      PD  TY  L+ G C +G ++EA +L + M    ++P+ + YN +I GY K 
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G+   A R+  EM   G  P I +Y++ I  LC++ +   AE LL +M+  G+ P  S Y
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604

Query: 564 NILYRAKNNIE 574
             +  A   ++
Sbjct: 605 LSIIEAMETVD 615



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S I    K    ++A     +ML+ G+ P + T+N+L+         DK + +  E  
Sbjct: 289 YNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMI 348

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +   + ++ + I      G +  A  ++ ++ E G  P+ V +  LI+G C+ GD +
Sbjct: 349 SKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAK 408

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++   G+  T  TYT LI  L K    K+    + K+Q  G+ P +  +N LI
Sbjct: 409 RAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALI 468

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +   F+L  EM + +V  + +TYNTL+ G C+E +V+EA +LLD+MK  GI 
Sbjct: 469 DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ I+YN LI G+   G+   AFR+ +++ + G  P+++TYN LI+   K    + A +L
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDME 437
           ++EM  +GITP + TY  +I++    DD+E
Sbjct: 589 LKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 161/477 (33%), Positives = 254/477 (53%), Gaps = 10/477 (2%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           + S +++ ++ ++ +  L D+AL   H     G  P   ++N++L   I+S    K  + 
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS----KRNIS 187

Query: 164 FSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           F+EN        +V  +V+++ ILI+G C AG+++ A  + +++E  G  PNVV Y +LI
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK   I+    L R +   GL     +Y V+I GL + G  K+      +M   G S
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
               TYN LI  YC EG   +   +  EM    +  +V+TY +LI  +CK   +  A   
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           LDQM++ G+ PN  TY  L+DGF   G  ++A+R+  ++  NG SPSVVTYN LI     
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  ++ +M+E+G++P  V+Y+ ++  F RS D+++A  +   M + G  PD  T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G C +   KEA  L+  M    L P++  Y  +I  YC EG+  +AL+L  EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           EKG++P++ +YS  I  L +  +  EA+ LL ++      PS   Y+ L    +NIE
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 241/482 (50%), Gaps = 51/482 (10%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D AL  F +M   G  P   T+N+L+    K    D G+        K +E ++ S+ ++
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C  G + +   VL ++   G+S + V Y +LI G CK G+  +A ++  ++   GL
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +  TYT LI  + K G      EF ++M++ G+ P+  TY  L+  +  +G ++E ++
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +  EM     + +VVTYN LI G C   ++++A  +L+ MK  G+SP+V++Y+ ++ GFC
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            + + D+A R+  ++   G  P  +TY+ LI+ F +   +K A DL  EM   G+ P E 
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL---------------- 465
           TYT LI+++    D+EKA ++++ M + G  PDV TY VLI+GL                
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581

Query: 466 ----------------------------------CMKGNMKEASKLFNSMWETKLEPNDV 491
                                             CMKG M EA ++F SM     +P+  
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN+MI G+C+ G+  +A  L  EM + G + +  +  + +  L ++GK  E   ++  +
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701

Query: 552 LK 553
           L+
Sbjct: 702 LR 703



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 90/504 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID + K R  D        M   G+ P   ++N ++  + +     +     +E N
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R    LD  ++  LIKG C+ G+ ++A  +  ++   G +P+V+ YTSLI   CK G++ 
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA     ++   GL   + TYT L+ G  + G   + +    +M  NG SPS+ TYN LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  GK+ +   + ++M+ + ++ +VV+Y+T++ G C+   V EA R+  +M   GI 
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 348 PNVITYNKLIDGFCDA-----------------------------------GETDKAFRL 372
           P+ ITY+ LI GFC+                                    G+ +KA +L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS--- 429
            N++   G  P VVTY+VLI   +K   ++ A  L+ ++      PS+VTY  LI++   
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 430 ------------FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                       F     M +A +++  M      PD   Y ++IHG C  G++++A  L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 478 FNSMWETKL---------------------EPNDVVYNMMIFGYC--------------- 501
           +  M ++                       E N V+ +  +   C               
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH--VLRSCELSEAEQAKVLVEIN 720

Query: 502 -KEGNSYRALRLLGEMNEKGLVPN 524
            +EGN    L +L EM + G +PN
Sbjct: 721 HREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 86/400 (21%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+I +  K+   ++A+ +  QM   G+ P   T+ +L+    +    ++ +    E N
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                  V ++  LI G C  G +  A  VL  ++E G SP+VV Y++++ G C++ D++
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  + R++ E G+     TY+ LI G  +    K+  + YE+M   G+ P  +TY  LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL--------- 338
           + YC EG + +  +L +EM  + V  +VVTY+ LI GL K+ R +EA+RLL         
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 339 -------------------------------------DQM--KMAGIS--PNVITYNKLI 357
                                                DQ+   M G +  P+   YN +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG------------------ 399
            G C AG+  KA+ L+ ++  +G     VT   L++A  K G                  
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707

Query: 400 -----------------NSKMASDLVREMEERGITPSEVT 422
                            N  +  D++ EM + G  P+ ++
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 167/474 (35%), Positives = 248/474 (52%), Gaps = 4/474 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK---SCSFDKG 160
           + S +++ ++ +  +  L ++AL   +     G  P   ++N++L  VI+   S    +G
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            +F       V  +VY++ ILI+G C AG+L        ++E  G  PNVV Y ++ID  
Sbjct: 190 -IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   I  A  L R +   GL     +Y V+I GL + G  K+  E  E+M      P  
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            T+N LI+ YCN G   +   L  EM    ++ NVVTY TLI  +CK   +  A   LDQ
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G+ PN  TY  LIDGF   G   +A+++  ++  NG +P+++TYN LI      G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + AS L++EM ERG  P  V+Y+ +I  F R+ ++EKAF++   M   G SPDV TY  
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + E   LF  M    L P++V Y  +I  YC EG+  +ALRL  EM +KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             P+I +Y+  I    +  +  EA+ LL ++L     P+   YN L    NN+E
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 232/465 (49%), Gaps = 20/465 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +IIDA+ K R   +A      M   G+ P   ++N ++  + +     +      E +
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +   D  +F  LI G C  G+ ++A  +  ++ + G SPNVV YT+LI+  CK G++ 
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA     ++ + GL     TYT LI G  + G  K  ++  ++M  NG +P++ TYN LI
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G++ +   L  EM  R    +VV+Y+T+I G C+   +++A +L  +M   GIS
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V TY+ LI G C      +   LF ++ S G  P  VTY  LI A+   G+   A  L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI----- 462
             EM ++G +P  VTY +LI+ F +    ++A  +   +      P+  TY  LI     
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 463 ----------HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
                      G CMKG M EA ++  SM +   + N+ VYN++I G+ K GN  +A  L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             EM   G  P+  +  +    L  +GK    EV LNQ+L   LK
Sbjct: 661 YKEMLHSGFAPHSVTIMALAKSLYHEGK----EVELNQLLDYTLK 701



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 205/494 (41%), Gaps = 110/494 (22%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSSHSHAAAQTLILKII 74
           +AF L    + +GL     S ++++  L            L +MS   +   +     +I
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315

Query: 75  SGRITSSSFTPRSLLCHLTQLFPS-SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           +G     +F  ++L+ H   +    S N VT    Y ++I++  K+   ++A+ +  QM 
Sbjct: 316 NGYCNVGNFH-QALVLHAEMVKNGLSPNVVT----YTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE----LDVYSFGILIKGCCEAG 189
           D G+ P   T+ +L+    +     + +    E    VE      + ++  LI G C  G
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE---MVENGFTPTIITYNALINGHCILG 427

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +  A  +L ++ E GF P+VV Y+++I G C+N ++E+A  L  ++   G+     TY+
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GL K     +  + +++M   G+ P   TY  LI+ YC EG + +  +L DEM  +
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID----------- 358
             + ++VTYN LI G  K+ R +EA+RLL ++      PN ITYN LID           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 359 ----GFC-----------------------------------DAGETDKAFRLFNQLKSN 379
               GFC                                     G  +KA+ L+ ++  +
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 380 GQSPSVVTY-----------------------------------NVLIRAFSKAGNSKMA 404
           G +P  VT                                     VLI   SK GN    
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAV 727

Query: 405 SDLVREMEERGITP 418
            +++++M   G+ P
Sbjct: 728 FNVLKDMALSGLLP 741


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 160/461 (34%), Positives = 239/461 (51%), Gaps = 25/461 (5%)

Query: 128 YFHQ------------MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVEL- 173
           YFHQ            +L SG +P   TFN+++  F I       G +F + + C+  L 
Sbjct: 100 YFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCIN------GMIFKALDFCQNLLA 153

Query: 174 -----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                D +++G LI G  + G +  A  +L ++E+    PN+V+Y++LIDG CK+G +  
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  +IGE G++    TY  LI G    G  ++  +   KM    V P  YT+N LI 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C EG++ E   +   M  R    ++VTYN L+ G C    V EA  L ++M   G+ P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+ YN LIDG+C     D+A  LF +L +    P++ +YN LI     +G       L+
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM      P  VTY ILID+  +   + +A  +  +M K G  P++ TY  ++ G C++
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            N+  A  +FN M ++ LEP+ + YN++I GYCK      A+ L  EM  K L+P+IASY
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +S I  LC  G+ P  + LL++M   G  P V  YNIL  A
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDA 554



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 168/592 (28%), Positives = 263/592 (44%), Gaps = 47/592 (7%)

Query: 14  LNLISRMAKLPPLKAFS-LFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
            N + R+   PP   F  L     R G  H P +IS+  +L  SK  S S A    LI  
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMG--HYPTAISLFTQLQ-SKGISPSIATFTILINC 99

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
                 T+ +F+       L  +  S   P   +  + +II+    + +  +AL +   +
Sbjct: 100 YFHQSHTAFAFS------LLATILKSGYQPNLVT--FNTIINGFCINGMIFKALDFCQNL 151

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           L  G      T+ +L+  + K+           E  +  V+ ++  +  LI G C+ G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  + +Q+ E G   + V Y SLIDGCC  G  +    L  K+    +    +T+ +L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I  L K G   +       M   G  P + TYN L+  YC+   V E  +LF+ M  R +
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V+ YN LI G CK   V EA  L  ++    + P + +YN LIDG C++G      +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++  + Q P VVTYN+LI A  K G    A  ++  M ++G+ P+ VTY  ++D + 
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             +++  A ++++ M KSG  PD+  Y VLI+G C    + EA  LF  M    L P+  
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-------------- 537
            YN +I G C  G       LL EM + G  P++ +Y+  +   C+              
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571

Query: 538 -DGKWPE-------------------AEVLLNQMLKLGLKPSVSLYNILYRA 569
            +G WP+                   AE  L  +L  G  P+V  Y IL  A
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA 623



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 230/489 (47%), Gaps = 45/489 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----L 162
           +Y ++ID   K      AL    Q+ + G+   + T+NSL    I  C     W     L
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL----IDGCCSVGRWQEVTQL 252

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                R  V+ D Y+F ILI   C+ G + +A  VL  + + G  P++V Y +L++G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             ++  A+ LF ++ + GL      Y VLI G  K  +  +    ++++    + P++ +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   CN G++S   KL DEM       +VVTYN LI  LCKE R+ EA  +L  M 
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA---- 398
             G+ PN++TYN ++DG+C     + A  +FN++  +G  P ++ YNVLI  + K     
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492

Query: 399 -------------------------------GNSKMASDLVREMEERGITPSEVTYTILI 427
                                          G      +L+ EM + G +P  +TY IL+
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+F ++   +KA  ++  + + G  PD YT   ++  LC    +K A      +      
Sbjct: 553 DAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN   Y ++I   CK+G+   A+ LL +M +    P+  ++   IGVL Q  +  +AE L
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671

Query: 548 LNQMLKLGL 556
             +M+  GL
Sbjct: 672 REEMIARGL 680



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 189/384 (49%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C   +++ A    N++  +   P   ++  L+    + G    A  LF ++   G+  + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+T+LI   F        F     +  +G  P+L T+N +I+ +C  G + +       
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +  +    +  TY TLI GL K  +++ A  LL +M+ + + PN++ Y+ LIDG C  G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A  L +Q+   G     VTYN LI      G  +  + L+ +M    + P + T+ I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID+  +   + +A  + ++M K G  PD+ TY  L+ G C + N+ EA +LFN M +  
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           LEP+ + YN++I GYCK      A+ L  E+  K LVP IASY+S I  LC  G+    +
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            LL++M      P V  YNIL  A
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDA 414



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 35/347 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID + K+++ D+A+  F ++ +  + P   ++NSL+  +  S           E  
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DV ++ ILI   C+ G + +A  VL  + + G  PN+V Y +++DG C   ++ 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++ + GL      Y VLI G  K  +  +    +++M+   + P + +YN LI
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI---C--------------------- 323
              CN G++    +L DEM     + +V+TYN L+   C                     
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP 577

Query: 324 ----------GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
                      LCK  +++ AE  L  + M G SPNV TY  LI+  C  G   +A  L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           ++++ N + P  +T+ ++I    +   +  A  L  EM  RG+   E
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIE 684



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 48/104 (46%)

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           H  C   N+ +A   FN M      P   V++ ++    + G+   A+ L  ++  KG+ 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+IA+++  I           A  LL  +LK G +P++  +N +
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTI 131


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/454 (34%), Positives = 234/454 (51%), Gaps = 15/454 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G +P   TF++LL  +       +    F +  C+   +V +F  L+ G
Sbjct: 131 ALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQ-MCRP--NVVTFTTLMNG 187

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ E+  +  
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL+K+G   D    Y +MQ  G+ P L+TYNC+I  +C+ G+ SE  +L 
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R++  NVVTY+ LI    KE +  EAE L D+M   GI PN ITYN +IDGFC  
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D A  +F  + + G SP V T+N LI  +  A      ++L+ EM E G+     TY
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTY 427

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G +K+A ++F +M +
Sbjct: 428 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487

Query: 484 TKL-----------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +K+           EP+   YN++I G   EG    A  L  EM  +G+VPN  +YSS I
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  EA  + + M      P V  +N L
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 581



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 220/456 (48%), Gaps = 13/456 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+D   K   +  AL    +M + S ++P    +++++  + K          ++E 
Sbjct: 216 YGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM 275

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D++++  +I G C +G  ++A  +L ++ E   +PNVV Y++LI+   K    
Sbjct: 276 QEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ L+ ++   G++    TY  +I G  K          +  M   G SP ++T+N L
Sbjct: 336 FEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTL 395

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   ++ +G +L  EM    +  +  TYNTLI G C    +  A  L  QM  +G+
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            P+++T N L+DG CD G+   A  +F  ++            NG  P V TYN+LI   
Sbjct: 456 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L +EM  RGI P+ +TY+ +I+   +   +++A +M+  M    FSPDV
Sbjct: 516 INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDV 575

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  L+ G C  G + +  +LF  M    +  + + Y  +I G+ K GN   AL +  E
Sbjct: 576 VTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           M   G+ P+  +  S + VL    +   A  +L  +
Sbjct: 636 MISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 185/370 (50%), Gaps = 14/370 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++     NP   +  Y ++I+A++K R   +A   + +ML  G+ P + T+NS++   
Sbjct: 307 LQEMLERKINPNVVT--YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 152 IKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D    +F+         DV++F  LI G C A  ++   E+L+++ E G   + 
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             Y +LI G C  GD+  A  L +++   G+     T   L+ GL  NG  KD  E ++ 
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484

Query: 271 MQ-----------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           MQ            NGV P + TYN LI    NEGK  E  +L+ EM HR +  N +TY+
Sbjct: 485 MQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYS 544

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           ++I GLCK+ R+ EA ++ D M     SP+V+T+N L+ G+C AG  D    LF ++   
Sbjct: 545 SMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRR 604

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G     +TY  LI  F K GN   A D+ +EM   G+ P  +T   ++      +++++A
Sbjct: 605 GIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664

Query: 440 FEMYSLMQKS 449
             M   +Q S
Sbjct: 665 VAMLEDLQMS 674



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 5/275 (1%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +V+ +N L+  + +  R      L  +M+   I  +V ++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT++ L+           A DL  +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P+  TYG ++ G+C  G+   A 
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + ++PN V+Y+ +I G  K+G    A  L  EM EKG+ P++ +Y+  I  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W EA+ LL +ML+  + P+V  Y+ L  A
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 5/213 (2%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSV+ +N L+    +     +   L ++ME +
Sbjct: 47  KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK 106

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++ ILI  F     +  A   +  + K GF PDV T+  L+HGLC++  + EA
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF+ M      PN V +  ++ G C+EG    A+ LL  M E GL PN  +Y + +  
Sbjct: 167 LDLFHQMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222

Query: 535 LCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNIL 566
           +C+ G    A  LL +M ++  +KP+V +Y+ +
Sbjct: 223 MCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YN 494
           +E A +++S M +S   P V  +  L+  +           L+  M E K  P DV  +N
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKM-ERKQIPCDVYSFN 116

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I  +C       AL   G++ + G  P++ ++S+ +  LC + +  EA  L +QM + 
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRP 176

Query: 555 GLKPSVSLYNILYRAKNNIE 574
            +    +L N L R    +E
Sbjct: 177 NVVTFTTLMNGLCREGRVVE 196


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/474 (35%), Positives = 248/474 (52%), Gaps = 4/474 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK---SCSFDKG 160
           + S +++ ++ +  +  L ++AL   +     G  P   ++N++L  VI+   S    +G
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            +F       V  +VY++ ILI+G C AG+L        ++E  G  PNVV Y ++ID  
Sbjct: 190 -IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   I  A  L R +   GL     +Y V+I GL + G  K+  E  E+M      P  
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            T+N LI+ YCN G   +   L  EM    ++ NVVTY TLI  +CK   +  A   LDQ
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G+ PN  TY  LIDGF   G   +A+++  ++  NG +P+++TYN LI      G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + AS L++EM ERG  P  V+Y+ +I  F R+ ++EKAF++   M   G SPDV TY  
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + E   LF  M    L P++V Y  +I  YC EG+  +ALRL  EM +KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             P+I +Y+  I    +  +  EA+ LL ++L     P+   YN L    NN+E
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 232/465 (49%), Gaps = 20/465 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +IIDA+ K R   +A      M   G+ P   ++N ++  + +     +      E +
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +   D  +F  LI G C  G+ ++A  +  ++ + G SPNVV YT+LI+  CK G++ 
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA     ++ + GL     TYT LI G  + G  K  ++  ++M  NG +P++ TYN LI
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G++ +   L  EM  R    +VV+Y+T+I G C+   +++A +L  +M   GIS
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V TY+ LI G C      +   LF ++ S G  P  VTY  LI A+   G+   A  L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI----- 462
             EM ++G +P  VTY +LI+ F +    ++A  +   +      P+  TY  LI     
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 463 ----------HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
                      G CMKG M EA ++  SM +   + N+ VYN++I G+ K GN  +A  L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             EM   G  P+  +  +    L  +GK    EV LNQ+L   LK
Sbjct: 661 YKEMLHSGFAPHSVTIMALAKSLYHEGK----EVELNQLLDYTLK 701



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 205/494 (41%), Gaps = 110/494 (22%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSSHSHAAAQTLILKII 74
           +AF L    + +GL     S ++++  L            L +MS   +   +     +I
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315

Query: 75  SGRITSSSFTPRSLLCHLTQLFPS-SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           +G     +F  ++L+ H   +    S N VT    Y ++I++  K+   ++A+ +  QM 
Sbjct: 316 NGYCNVGNFH-QALVLHAEMVKNGLSPNVVT----YTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE----LDVYSFGILIKGCCEAG 189
           D G+ P   T+ +L+    +     + +    E    VE      + ++  LI G C  G
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE---MVENGFTPTIITYNALINGHCILG 427

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +  A  +L ++ E GF P+VV Y+++I G C+N ++E+A  L  ++   G+     TY+
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GL K     +  + +++M   G+ P   TY  LI+ YC EG + +  +L DEM  +
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID----------- 358
             + ++VTYN LI G  K+ R +EA+RLL ++      PN ITYN LID           
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 359 ----GFC-----------------------------------DAGETDKAFRLFNQLKSN 379
               GFC                                     G  +KA+ L+ ++  +
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 380 GQSPSVVTY-----------------------------------NVLIRAFSKAGNSKMA 404
           G +P  VT                                     VLI   SK GN    
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAV 727

Query: 405 SDLVREMEERGITP 418
            +++++M   G+ P
Sbjct: 728 FNVLKDMALSGLLP 741


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 244/455 (53%), Gaps = 3/455 (0%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGI 180
           +D+A   F+ M + GV P   T NSLL   +K    +  W+ ++E  R +++  VY+F I
Sbjct: 167 ADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNI 226

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+ G L KA + +  +E  G  PN+V Y +++ G C +G +E A  +   +    
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI G+ K G  ++  + +E+M   G+ PS   YN LI  +CN+G +    
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
              DEM  + ++  + TYN+LI  L  E R  EAE ++ +++  GISP+ ITYN LI+G+
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C      KAF L +++ ++G  P+  TY  L+   SK    K A DL +++   G+ P  
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           + +  LID    + +++ AFE+   M +    PD  T+  ++ G C +G ++EA +LF+ 
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    ++P+ + +N +I GY + G+   A R+  EM + G  P + +Y++ +  LC++ +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR--AKNNI 573
              AE LL +M+  G+ P  + Y  L    AK NI
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 200/425 (47%), Gaps = 40/425 (9%)

Query: 181 LIKGCCEAGDLNKAFEVLNQL----EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           L++     G  N   E+   L    + +GF  ++V +  LI  CC     + A   F  +
Sbjct: 119 LLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTM 177

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G++ T  T   L+    K    +  +  Y +M    +  S+YT+N +I+  C EGK+
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +       M    V  N+VTYNT++ G C   RV+ A+ +L  MK   I P+  TY  L
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD---------- 406
           I G C  G  ++A ++F ++   G  PS V YN LI  F   GN  MAS           
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357

Query: 407 -------------------------LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
                                    +++E++E+GI+P  +TY ILI+ + R  + +KAF 
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M  SG  P   TY  L+H L  K  MKEA  LF  +    + P+ +++N +I G+C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
              N   A  LL +M+   + P+  ++++ +   C++GK  EA  L ++M + G+KP   
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 562 LYNIL 566
            +N L
Sbjct: 538 SFNTL 542



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 128/297 (43%), Gaps = 36/297 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID        D A  Y  +ML  G+ P  +T+NSL+  +      D+      E 
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D  ++ ILI G C   +  KAF + +++   G  P    YTSL+    K   +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  LF+KI   G++     +  LI G   N   K  FE  + M    V P   T+N +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN-------------------------------- 314
           +  +C EGKV E  +LFDEM+ R +  +                                
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 315 ---VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
              V+TYN L+ GLCK      AE LL +M   G++P+  TY  LI+G       D+
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/461 (34%), Positives = 239/461 (51%), Gaps = 25/461 (5%)

Query: 128 YFHQ------------MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVEL- 173
           YFHQ            +L SG +P   TFN+++  F I       G +F + + C+  L 
Sbjct: 100 YFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCIN------GMIFKALDFCQNLLA 153

Query: 174 -----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                D +++G LI G  + G +  A  +L ++E+    PN+V+Y++LIDG CK+G +  
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  +IGE G++    TY  LI G    G  ++  +   KM    V P  YT+N LI 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C EG++ E   +   M  R    ++VTYN L+ G C    V EA  L ++M   G+ P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+ YN LIDG+C     D+A  LF +L +    P++ +YN LI     +G       L+
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM      P  VTY ILID+  +   + +A  +  +M K G  P++ TY  ++ G C++
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            N+  A  +FN M ++ LEP+ + YN++I GYCK      A+ L  EM  K L+P+IASY
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +S I  LC  G+ P  + LL++M   G  P V  YNIL  A
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDA 554



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/592 (28%), Positives = 263/592 (44%), Gaps = 47/592 (7%)

Query: 14  LNLISRMAKLPPLKAFS-LFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
            N + R+   PP   F  L     R G  H P +IS+  +L  SK  S S A    LI  
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMG--HYPTAISLFTQLQ-SKGISPSIATFTILINC 99

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
                 T+ +F+       L  +  S   P   +  + +II+    + +  +AL +   +
Sbjct: 100 YFHQSHTAFAFS------LLATILKSGYQPNLVT--FNTIINGFCINGMIFKALDFCQNL 151

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           L  G      T+ +L+  + K+           E  +  V+ ++  +  LI G C+ G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  + +Q+ E G   + V Y SLIDGCC  G  +    L  K+    +    +T+ +L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I  L K G   +       M   G  P + TYN L+  YC+   V E  +LF+ M  R +
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V+ YN LI G CK   V EA  L  ++    + P + +YN LIDG C++G      +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++  + Q P VVTYN+LI A  K G    A  ++  M ++G+ P+ VTY  ++D + 
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             +++  A ++++ M KSG  PD+  Y VLI+G C    + EA  LF  M    L P+  
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-------------- 537
            YN +I G C  G       LL EM + G  P++ +Y+  +   C+              
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571

Query: 538 -DGKWPE-------------------AEVLLNQMLKLGLKPSVSLYNILYRA 569
            +G WP+                   AE  L  +L  G  P+V  Y IL  A
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA 623



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 224/464 (48%), Gaps = 10/464 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----L 162
           +Y ++ID   K      AL    Q+ + G+   + T+NSL    I  C     W     L
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL----IDGCCSVGRWQEVTQL 252

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                R  V+ D Y+F ILI   C+ G + +A  VL  + + G  P++V Y +L++G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             ++  A+ LF ++ + GL      Y VLI G  K  +  +    ++++    + P++ +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   CN G++S   KL DEM       +VVTYN LI  LCKE R+ EA  +L  M 
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN++TYN ++DG+C     + A  +FN++  +G  P ++ YNVLI  + K     
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L +EM  + + P   +Y  LID       +    E+   M  SG SPDV TY +L+
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
              C      +A  LF  + E  + P+    + ++   CK      A   L  +   G  
Sbjct: 553 DAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           PN+ +Y+  I  LC+DG + EA +LL++M      P    + I+
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 189/384 (49%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C   +++ A    N++  +   P   ++  L+    + G    A  LF ++   G+  + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+T+LI   F        F     +  +G  P+L T+N +I+ +C  G + +       
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +  +    +  TY TLI GL K  +++ A  LL +M+ + + PN++ Y+ LIDG C  G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A  L +Q+   G     VTYN LI      G  +  + L+ +M    + P + T+ I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID+  +   + +A  + ++M K G  PD+ TY  L+ G C + N+ EA +LFN M +  
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           LEP+ + YN++I GYCK      A+ L  E+  K LVP IASY+S I  LC  G+    +
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            LL++M      P V  YNIL  A
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDA 414



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 35/347 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID + K+++ D+A+  F ++ +  + P   ++NSL+  +  S           E  
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DV ++ ILI   C+ G + +A  VL  + + G  PN+V Y +++DG C   ++ 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++ + GL      Y VLI G  K  +  +    +++M+   + P + +YN LI
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI---C--------------------- 323
              CN G++    +L DEM     + +V+TYN L+   C                     
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWP 577

Query: 324 ----------GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
                      LCK  +++ AE  L  + M G SPNV TY  LI+  C  G   +A  L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           ++++ N + P  +T+ ++I    +   +  A  L  EM  RG+   E
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIE 684



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 48/104 (46%)

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           H  C   N+ +A   FN M      P   V++ ++    + G+   A+ L  ++  KG+ 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+IA+++  I           A  LL  +LK G +P++  +N +
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTI 131


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/407 (36%), Positives = 220/407 (54%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R +V  +VY++ ILI+G C  G+L K      ++E  G  PNVV Y +LID  CK G I+
Sbjct: 3   RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L + +   G+     +Y V+I GL + G  K+ +E  E+M   G +P   TYN L+
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC EG   +   +  EM    V+ +VVTY  LI  +CK   +  A    DQM++ G+ 
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY  LIDGF   G  ++A+R+ N++  +G SPSVVTYN  I         + A  +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V+EM E+G+ P  V+Y+ +I  F R  ++++AF+M   M + G SPD  TY  LI GLC 
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA  L   M +  L P++  Y  +I  YC EG+  +AL L  EM  KG +P+  +
Sbjct: 303 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 362

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           YS  I  L +  +  EA+ LL +++     PS   Y+ L    +NIE
Sbjct: 363 YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 409



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 244/481 (50%), Gaps = 51/481 (10%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           + L  F +M  +G  P   T+N+L+    K    D+ + L  S +   ++ ++ S+ ++I
Sbjct: 28  KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 87

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  G + +A+E+L ++   GF+P+ V Y +L++G CK G+  +A ++  ++   G+ 
Sbjct: 88  NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 147

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  TYT LI  + K        EF+++M++ G+ P+  TY  LI  +  +G ++E +++
Sbjct: 148 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 207

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +EM     + +VVTYN  I G C   R++EA  ++ +M   G++P+V++Y+ +I GFC 
Sbjct: 208 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 267

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            GE D+AF++  ++   G SP  VTY+ LI+   +      A DL +EM + G+ P E T
Sbjct: 268 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 327

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL----------------- 465
           YT LI+++    D+ KA  ++  M   GF PD  TY VLI+GL                 
Sbjct: 328 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 387

Query: 466 ---------------------------------CMKGNMKEASKLFNSMWETKLEPNDVV 492
                                            CMKG M EA ++F SM E   +P + V
Sbjct: 388 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 447

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I G+C+ GN  +A  L  EM   G VP+  +  + I  L ++G   E   ++   L
Sbjct: 448 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507

Query: 553 K 553
           +
Sbjct: 508 R 508



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 145/261 (55%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    V+ NV TYN LI G C    +Q+      +M+  G  PNV+TYN LID +C  G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+AF L   + S G  P++++YNV+I    + G+ K A +++ EM  +G TP EVTY  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L++ + +  +  +A  +++ M ++G SP V TY  LI+ +C   N+  A + F+ M    
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L PN+  Y  +I G+ ++G    A R+L EM E G  P++ +Y++ I   C   +  EA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            ++ +M++ GL P V  Y+ +
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTI 261



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 22/321 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R Y ++ID   +  L ++A    ++M +SG  P   T+N+   F+   C  ++       
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA---FIHGHCVLERMEEALGV 242

Query: 167 NRCKVE----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +  VE     DV S+  +I G C  G+L++AF++  ++ E G SP+ V Y+SLI G C+
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
              +  A  L +++ ++GL   + TYT LI      G        +++M   G  P   T
Sbjct: 303 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 362

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI--C-------------GLCK 327
           Y+ LI+    + +  E  +L  ++ + E   + VTY+TLI  C             G C 
Sbjct: 363 YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCM 422

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           +  + EA+R+ + M      P    YN +I G C  G   KAF L+ ++  +G  P  VT
Sbjct: 423 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 482

Query: 388 YNVLIRAFSKAGNSKMASDLV 408
              LI+A  K G ++  S+++
Sbjct: 483 VITLIKALFKEGMNEEMSEVI 503


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 180/600 (30%), Positives = 287/600 (47%), Gaps = 73/600 (12%)

Query: 27  KAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS-------GRI 78
           +A  LF+  SR+  L   PQ  S I+ +L     +  +A A+ L+  +I         RI
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVL---TGAKLYAKARCLMRDLIQCLQNSRRSRI 108

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
             S F        L++L  S   P     ++  +I A  +  L ++AL+ +++M    V 
Sbjct: 109 CCSVFNV------LSRLESSKFTP----NVFGVLIIAFSEMGLVEEALWVYYKM---DVL 155

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           P     N +L  ++K   FD  W  + +   +    +V ++G LI GCC  GD  KAF +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            +++ E    P VVIYT LI G C    I  A+ +FR +   G++   +TY  ++ G  K
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 258 NGLQKDGFEFYEKMQLNG-----------------------------------VSPSLYT 282
               K   E Y++M  +G                                   V P+++ 
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YNCLI  YC  G +SE   L  E+   E+  +V TY+ LI GLC   R++EA+ LL +MK
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G  PN +TYN LIDG+C  G  +KA  + +Q+   G  P+++T++ LI  + KAG  +
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L  EM  +G+ P  V YT LID   +  + ++AF ++  MQ++G  P+V+T   LI
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 463 HGLCMKGNMKEASKLF-------------NSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
            GLC  G + +A KLF             N +  +   PN V+Y  +I G C +G  ++A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   +M   GL P++ +    I    +     +  +L   +LK+G+ P+ S+Y +L + 
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 14/220 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + ++ID + K+   + A+  + +M+  G+ P    + +L+    K  +  + +    E  
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVL-------------NQLEEMGFSPNVVIYT 214
              +  +V++   LI G C+ G ++ A ++              N+L+    SPN V+YT
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +LI G C +G I +A   F  +   GL     T  V+I G F+    +D       +   
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           G+ P+   Y  L   Y   G +    +  +++    + C+
Sbjct: 621 GIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCS 660


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 244/455 (53%), Gaps = 3/455 (0%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGI 180
           +D+A   F+ M + GV P   T NSLL   +K    +  W+ ++E  R +++  VY+F I
Sbjct: 167 ADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNI 226

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+ G L KA + +  +E  G  PN+V Y +++ G C +G +E A  +   +    
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI G+ K G  ++  + +E+M   G+ PS   YN LI  +CN+G +    
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
              DEM  + ++  + TYN+LI  L  E R  EAE ++ +++  GISP+ ITYN LI+G+
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C      KAF L +++ ++G  P+  TY  L+   SK    K A DL +++   G+ P  
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           + +  LID    + +++ AFE+   M +    PD  T+  ++ G C +G ++EA +LF+ 
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    ++P+ + +N +I GY + G+   A R+  EM + G  P + +Y++ +  LC++ +
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR--AKNNI 573
              AE LL +M+  G+ P  + Y  L    AK NI
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 200/425 (47%), Gaps = 40/425 (9%)

Query: 181 LIKGCCEAGDLNKAFEVLNQL----EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           L+K     G  N   E+   L    + +GF  ++V +  LI  CC     + A   F  +
Sbjct: 119 LLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTM 177

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G++ T  T   L+    K    +  +  Y +M    +  S+YT+N +I+  C EGK+
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +       M    V  N+VTYNT++ G C   RV+ A+ +L  MK   I P+  TY  L
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD---------- 406
           I G C  G  ++A ++F ++   G  PS V YN LI  F   GN  MAS           
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357

Query: 407 -------------------------LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
                                    +++E++E+GI+P  +TY ILI+ + R  + +KAF 
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M  SG  P   TY  L+H L  K  MKEA  LF  +    + P+ +++N +I G+C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
              N   A  LL +M+   + P+  ++++ +   C++GK  EA  L ++M + G+KP   
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 562 LYNIL 566
            +N L
Sbjct: 538 SFNTL 542



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 128/297 (43%), Gaps = 36/297 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID        D A  Y  +ML  G+ P  +T+NSL+  +      D+      E 
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D  ++ ILI G C   +  KAF + +++   G  P    YTSL+    K   +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  LF+KI   G++     +  LI G   N   K  FE  + M    V P   T+N +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN-------------------------------- 314
           +  +C EGKV E  +LFDEM+ R +  +                                
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 315 ---VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
              V+TYN L+ GLCK      AE LL +M   G++P+  TY  LI+G       D+
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 181/559 (32%), Positives = 284/559 (50%), Gaps = 38/559 (6%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS-----HAAAQTLILKI------ 73
           P  AF +F    R  L+    + + +L  L+   SSHS      A    + L I      
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNT 210

Query: 74  ----ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS-RLSDQALFY 128
               I G    + F       ++   +  S + VT    Y +I+DA  K  RL D A   
Sbjct: 211 FNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT----YNTILDALCKKGRLGD-ARDL 265

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--------DVYSFGI 180
              M   G+ P  NT+N   I V   C    GWL  + N   +EL        DV+++ +
Sbjct: 266 LMDMKSRGLLPNRNTYN---ILVYGYCKM--GWLKEAANV--IELMTQNNLLPDVWTYNM 318

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C  G + +AF++ +++E +   P+VV Y +LI+GC +   I  A  L  ++ E G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     T+ +++    K G   D      KM+ +G SP   TYN LI+ YC  G + E F
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +  DEM  + +  + VT NT++  LC+E +++EA +LL   +  G   + ++Y  LI G+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  D+A +L++++K     PS VTYN +I    + G ++ A   + E+ E G+ P E
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  ++  + R  D+EKAF+ ++ M ++ F PDV+T  +L+ GLCM+G +++A KLFN+
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618

Query: 481 MWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            W +K +  D V YN +I   CKEG    A  LL EM EK L P+  +Y++ I  L   G
Sbjct: 619 -WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677

Query: 540 KWPEAEVLLNQMLKLGLKP 558
           +  EAE  +++ML+ G  P
Sbjct: 678 RIREAEEFMSKMLEKGXLP 696



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 179/560 (31%), Positives = 289/560 (51%), Gaps = 25/560 (4%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKII 74
           LISR     P    S F WA +  L   P +    L  LL  + SH   + A++L+L  I
Sbjct: 62  LISR-----PNILISFFKWA-QTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFI 115

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +        T R    HL+ L  +S +      L ++ I A+++S     A   F +M  
Sbjct: 116 A--------TDRRHDLHLSILRLTSPSKA----LLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 135 SGVRPRSNTFNSLLIFVIK-----SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
             +RP   T N+LL  +++     S SF +   F    +  +  +V +F I+I G C   
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE-AFNDAIKLGIVPNVNTFNIVIYGYCLEN 222

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
               A E LN + +   SP+ V Y +++D  CK G +  A+ L   +   GL+  ++TY 
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G  K G  K+     E M  N + P ++TYN LI+  CNEG++ E FKL DEM + 
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++  +VV+YNTLI G  +  ++ EA +LL++M   G+ PN +T+N ++  +C  G+ D A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                +++ +G SP  VTYN LI  + KAGN   A   + EM  + +    VT   ++ +
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R   +E+A+++ S  +K G+  D  +YG LI G    GN+  A KL++ M E ++ P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN +I G C+ G + +A+  L E+ E GL+P+  +Y++ +   C++G   +A    N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           +M++   KP V   NIL R 
Sbjct: 583 KMVENSFKPDVFTCNILLRG 602



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 32/398 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+  L+     +A     +M + GV+P + T N ++ +  K    D      S   
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA----SNTI 406

Query: 169 CKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            K+E      D  ++  LI G C+AG++ +AF  ++++       + V   +++   C+ 
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +E A  L     + G    + +Y  LI G FK+G      + +++M+   + PS  TY
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           NC+I   C  GK  +     +E+    +  +  TYNT++ G C+E  V++A +  ++M  
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               P+V T N L+ G C  G  +KA +LFN   S G++   VTYN LI +  K G    
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD--------- 454
           A +L+ EMEE+ + P   TY  +I +   S  + +A E  S M + G  P          
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNE 706

Query: 455 --------------VYTYGVLIHGLCMKGNMKEASKLF 478
                            Y   I  LC +G  K+A ++F
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 24/348 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + K+    +A     +M    ++  S T N++L  + +    ++ +   S  R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +   +D  S+G LI G  + G++++A ++ ++++E    P+ V Y  +I G C+ G  E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A     ++ E GL+  + TY  ++ G  + G  +  F+F+ KM  N   P ++T N L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG + +  KLF+    +  A + VTYNTLI  LCKE R+ +A  LL +M+   + 
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS----------------------- 384
           P+  TYN +I    D+G   +A    +++   G  P                        
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSS 720

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            V Y+  I+     G  K A  +  E +++GIT  + TY  L+D  ++
Sbjct: 721 SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 28/248 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  II    +   ++QA+   +++L+SG+ P   T+N++L    +    +K + F +   
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN  K   DV++  IL++G C  G L KA ++ N     G + + V Y +LI   CK G 
Sbjct: 586 ENSFKP--DVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS------ 279
           ++ A  L  ++ E  L    +TY  +I  L  +G  ++  EF  KM   G  P       
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLD 703

Query: 280 -----------------LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
                               Y+  I E C EGK  +  ++F E + + +  +  TY  L+
Sbjct: 704 XNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763

Query: 323 CGLCKEMR 330
            GL K  +
Sbjct: 764 DGLIKRRK 771


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 171/525 (32%), Positives = 273/525 (52%), Gaps = 12/525 (2%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           PL     FNW+ R+   +   SI +I RLL    ++  +   ++++   + G    S   
Sbjct: 87  PLLVLRYFNWSRRE--LNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSI-- 142

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
             SL+ H   L   S      S + + ++ A++++  +   L  F +  D   +    + 
Sbjct: 143 --SLIFH--SLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSC 198

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N LL  ++K   F      + E  R K+  ++ +F  +I G C+ G LNKA +V++ ++ 
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIER---AKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            GF PNVV Y +LIDG CK G + +   A  + +++ E  +     T+ VLI G  K+  
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                + +E+MQ  G+ P++ TYN L++  CNEGK++E   L DEM    +  NV+TYN 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI G CK+  ++EA  L D +   G++PNVIT+N L+ G+C  G+ ++AF L   +   G
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P+  TYN LI  F + G  +   +L+ EM+ RG+    VTY ILI ++    + +KA 
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAA 498

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M   G  P   TY +L++G CM+GN++ A  L   M +     N V YN++I GY
Sbjct: 499 RLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           C++G    A  LL EM EKGL+PN  +Y      + + G  P+ E
Sbjct: 559 CRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/271 (37%), Positives = 157/271 (57%), Gaps = 3/271 (1%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           ++ EM  R+++ N++T+NT+I GLCK  ++ +A  ++D MK+ G  PNV+TYN LIDG+C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276

Query: 362 DAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             G   K ++   +  ++  N  SP+ VT+NVLI  F K  N   A  +  EM+ +G+ P
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + VTY  L++       + +A  +   M  S   P+V TY  LI+G C K  ++EA +LF
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELF 396

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           +++ +  L PN + +N ++ GYCK G    A  L   M EKG +PN ++Y+  I   C++
Sbjct: 397 DNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GK  E + LLN+M   G+K     YNIL  A
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISA 487


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 180/600 (30%), Positives = 286/600 (47%), Gaps = 73/600 (12%)

Query: 27  KAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS-------GRI 78
           +A  LF+  SR+  L   PQ  S I+ +L     +  +A A+ L+  +I         RI
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVL---TGAKLYAKARCLMRDLIQCLQKSRRSRI 108

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
             S F        L++L  S   P     ++  +I A  +  L ++AL+ +++M    V 
Sbjct: 109 CCSVFNV------LSRLESSKFTP----NVFGVLIIAFSEMGLVEEALWVYYKM---DVL 155

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           P     N +L  ++K   FD  W  + +   +    +V ++G LI GCC  GD  KAF +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            +++ E    P VVIYT LI G C    I  A+ +FR +   G++   +TY  ++ G  K
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 258 NGLQKDGFEFYEKMQLNG-----------------------------------VSPSLYT 282
               K   E Y +M  +G                                   V P+++ 
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YNCLI  YC  G +SE   L  E+   E+  +V TY+ LI GLC   R++EA+ LL +MK
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G  PN +TYN LIDG+C  G  +KA  + +Q+   G  P+++T++ LI  + KAG  +
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L  EM  +G+ P  V YT LID   +  + ++AF ++  MQ++G  P+V+T   LI
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 463 HGLCMKGNMKEASKLF-------------NSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
            GLC  G + +A KLF             N +  +   PN V+Y  +I G C +G  ++A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   +M   GL P++ +    I    +     +  +L   +LK+G+ P+ S+Y +L + 
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 108/535 (20%), Positives = 204/535 (38%), Gaps = 106/535 (19%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + ++ID + K+   + A+  + +M+  G+ P    + +L+    K  +  + +    E  
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVL-------------NQLEEMGFSPNVVIYT 214
              +  +V++   LI G C+ G ++ A ++              N+L+    SPN V+YT
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +LI G C +G I +A   F  +   GL     T  V+I G F+    +D       +   
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 275 GVSPSLYTYNCLIHEYCNEGKV-------SEGFKLFDE----------MRHREVACNVVT 317
           G+ P+   Y  L   Y   G +        EG +  D           +R R   C V  
Sbjct: 621 GIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTE 680

Query: 318 ----------------------YNTLI--------------CGLCKEMRVQEAERLLDQM 341
                                 ++T++               G   + R  +A +L  QM
Sbjct: 681 KKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQM 740

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +M    P+++T    +    D G  D    +   ++  G    +   N LI  +SK G  
Sbjct: 741 QMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEI 800

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L    +++ +T    T+T +I         E+A ++++ M+++            
Sbjct: 801 GTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKET------------ 844

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLE-PNDVVYNMMIF-----GYCKEGNS-YRALRLLG 514
                   N +      N   E+ L  PNDV +  ++      G  +EG   +R+++   
Sbjct: 845 --------NKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMK--- 893

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              +  L P I+ +   + +LC+ G   EA   +   LK+ ++P+  ++  L  A
Sbjct: 894 --EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGA 943



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 27/244 (11%)

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             + + +MQ++   P + T    +    + G +  G  +   +RHR +  ++   N+LI 
Sbjct: 733 ALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 792

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
              K   +  A RL D  +      +V T+  +I G    G+ ++A +LF ++K   +  
Sbjct: 793 MYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK-- 846

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
                    RA     N +  S LV         P++VT+  ++ +   +  +E+  + +
Sbjct: 847 ---------RARKNKRNGEXESSLV--------LPNDVTFMGVLMACSHAGLVEEGKQHF 889

Query: 444 SLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             M++     P +  +G ++  LC  G + EA +    M    + PN VV+  ++     
Sbjct: 890 RSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSL 946

Query: 503 EGNS 506
           +G+S
Sbjct: 947 QGDS 950



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 34/270 (12%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           NKA ++  Q++     P++V  T  +  C   G ++  + +   I   GL         L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE- 310
           I    K G        ++  Q   V+    T+  +I  +   G+  E  +LF EM+    
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 311 ---------------VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-GISPNVITYN 354
                          V  N VT+  ++        V+E ++    MK    + P +  + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS--------KMASD 406
            ++D  C AG   +A+    ++      P+ V +  L+ A S  G+S        K+ S+
Sbjct: 907 CMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGACSLQGDSNGNGNSNIKIXSE 963

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDM 436
             R++ E  + PS V   +++ +   +  M
Sbjct: 964 ARRQLLE--LEPSHVGDNVIMSNLYAAKGM 991


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 221/397 (55%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++   G  P++  Y ++++G CK GDI+ A  L 
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ +  + A    Y  +I GL K     D F+ + KM+  G+ P ++TYN LI   CN 
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  R++  NVVT+N+LI    KE ++ EAE+L D+M    I PN++TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+GFC     D+A ++F  + S    P VVTYN LI+ F KA   +   +L REM +
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  + VTY  LI    ++ D + A +++  M   G  PD+ TY +L+ GLC  G +++
Sbjct: 425 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  + ++K+EPN   YN+MI G CK G       L   ++ KG+ PN+  Y++ I 
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 544

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
             C+ G   EA+ L  +M + G  P    YN L RA+
Sbjct: 545 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 581



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 241/448 (53%), Gaps = 3/448 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +   +   +A+    QM++ G +P + TFN+L+  +F+    S     +     R
Sbjct: 156 SLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR 215

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D++++G ++ G C+ GD++ A  +L ++E+     NVVIY ++IDG CK   ++ 
Sbjct: 216 -GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF K+   G+     TY  LI  L   G   D       M    ++P++ T+N LI 
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KLFDEM  R +  N+VTYN+LI G C   R+ EA+++   M      P
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TYN LI GFC A   ++   LF ++   G   + VTYN LI+   +AG+  MA  + 
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M   G+ P  +TY+IL+D   +   +EKA  ++  +QKS   P++YTY ++I G+C  
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++   LF S+    ++PN ++Y  MI G+C++G    A  L  EM E G +P+   Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 574

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I    +DG    +  L+ +M   G 
Sbjct: 575 NTLIRARLRDGDKAASAELIKEMRSCGF 602



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 242/498 (48%), Gaps = 10/498 (2%)

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS---------DQALFYF 129
           T+  F  RSL+        S S      R +        + +LS         D A+  F
Sbjct: 10  TAKRFVHRSLVVRGNAATVSPSLSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALF 69

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
            +M+ S   P    F+ LL  + K   FD       +     +  + Y++ IL+   C  
Sbjct: 70  GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRR 129

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
             L  A  VL ++ ++G+ P++V  +SL++G C    I  A  L  ++ E+G      T+
Sbjct: 130 SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTF 189

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI GLF +    +     ++M   G  P L+TY  +++  C  G +     L  +M  
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 249

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++  NVV YNT+I GLCK   + +A  L ++M+  GI P+V TYN LI   C+ G    
Sbjct: 250 GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSD 309

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RL + +     +P+VVT+N LI AF+K G    A  L  EM +R I P+ VTY  LI+
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            F   D +++A ++++LM      PDV TY  LI G C    ++E  +LF  M +  L  
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N V YN +I G  + G+   A ++  +M   G+ P+I +YS  +  LC+ GK  +A V+ 
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489

Query: 549 NQMLKLGLKPSVSLYNIL 566
             + K  ++P++  YNI+
Sbjct: 490 EYLQKSKMEPNIYTYNIM 507



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 158/301 (52%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+MQ  G+  + YTY+ L++ +C   ++     +  +M       ++VT ++L+ G C  
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ EA  L+DQM   G  P+ +T+N LI G     +  +A  L +++ + G  P + TY
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 224

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             ++    K G+  +A  L+++ME+  I  + V Y  +ID   +   M+ AF++++ M+ 
Sbjct: 225 GTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET 284

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  PDV+TY  LI  LC  G   +AS+L + M E K+ PN V +N +I  + KEG    
Sbjct: 285 KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIE 344

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L  EM ++ + PNI +Y+S I   C   +  EA+ +   M+     P V  YN L +
Sbjct: 345 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIK 404

Query: 569 A 569
            
Sbjct: 405 G 405



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 15/308 (4%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           K  +++ EK+  NG+S               E K+ +   LF EM       +++ ++ L
Sbjct: 43  KTSYDYREKLSRNGLS---------------ELKLDDAVALFGEMVKSRPFPSIIEFSKL 87

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  + K  +      L +QM+  GI  N  TY+ L++ FC   +   A  +  ++   G 
Sbjct: 88  LSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGY 147

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P +VT + L+  +        A  LV +M E G  P  VT+  LI      +   +A  
Sbjct: 148 EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 207

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M   G  PD++TYG +++GLC +G++  A  L   M + K+E N V+YN +I G C
Sbjct: 208 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLC 267

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K  +   A  L  +M  KG+ P++ +Y+S I  LC  G+W +A  LL+ M++  + P+V 
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 562 LYNILYRA 569
            +N L  A
Sbjct: 328 TFNSLIDA 335



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D   K    ++AL  F  +  S + P   T+N ++  + K+   + GW LF S +
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V  +  +I G C  G   +A  +  +++E G  P+   Y +LI    ++GD  
Sbjct: 529 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            +  L +++   G V    T +++I  L    L+K   E
Sbjct: 589 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 627


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 174/560 (31%), Positives = 282/560 (50%), Gaps = 26/560 (4%)

Query: 28   AFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS--FT 84
            A   F+WA S++G  H   + + +L+ LL ++     A      L++   ++  S   FT
Sbjct: 827  ALGFFDWATSQEGYNHDTYTCNCLLQALL-RLKRPKDA------LQVYRNKLCCSPNMFT 879

Query: 85   PRSL---LCH---------LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
               L   LC          L +  P    P     L+  +I     +R  D AL  F +M
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVP-QNVILHNVVIKGLCSARKLDSALELFKEM 938

Query: 133  LDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
             +SG   P   T+++++  ++KS   D       +   K    +V ++  L+ G C+AG 
Sbjct: 939  EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGK 998

Query: 191  LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            L++A  +L ++   G SPN+V Y ++IDG CK G I+ A  L  ++ + G      TYTV
Sbjct: 999  LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            L+    K G  +D     E M   G  P+L+TYN L+  +C + +V    +L   M  + 
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               NVV+YNT+I GLCK  +V E   LL+QM      P+++T+N +ID  C     D A+
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-EERGITPSEVTYTILIDS 429
             LFN ++ +G +P++VTYN L+    K+     A  L+REM  ++G +P  +TY  +ID 
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238

Query: 430  FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
              +S  +++A++++  M   G +PD  TY ++I  LC    M EA+ +   M +   +P 
Sbjct: 1239 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPG 1298

Query: 490  DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
             + Y  +I G+CK GN  +AL +L  +  KG  P++ ++S  I  L + G+  +A  LL 
Sbjct: 1299 AITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLE 1358

Query: 550  QMLKLGLKPSVSLYNILYRA 569
             ML+ GL P    YN L + 
Sbjct: 1359 TMLRAGLVPDTVTYNTLLKG 1378



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 250/510 (49%), Gaps = 38/510 (7%)

Query: 63   HAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS 122
            H   Q +IL  +  +   S+    S L    ++  S S P      Y +I+D+ +KS   
Sbjct: 906  HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCP-PDVFTYSTIVDSLVKSGKV 964

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
            D A      M+  G  P   T++SLL  + K+   D+         R     ++ ++  +
Sbjct: 965  DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG----------------- 224
            I G C+ G +++A+ +L ++ + G  PNVV YT L+D  CK G                 
Sbjct: 1025 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 1084

Query: 225  ------------------DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                              ++ERA  L   + + G V    +Y  +I GL K     +G  
Sbjct: 1085 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 267  FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
              E+M  N   P + T+N +I   C   +V   ++LF+ ++      N+VTYN+L+ GLC
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 327  KEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            K  R  +AE LL +M +  G SP++ITYN +IDG C +   D+A++LF Q+ S+G +P  
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 386  VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            VTY+++I +  K      A++++  M + G  P  +TY  LID F ++ +++KA E+  L
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324

Query: 446  MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            +   G  PDV T+ + I  L  +G +++A +L  +M    L P+ V YN ++ G+C    
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384

Query: 506  SYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +  A+ L   M + G  P+ A+Y++ +G L
Sbjct: 1385 TEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 266/571 (46%), Gaps = 70/571 (12%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII--SG 76
           R  K+ P  A+ LF+  +R+GL+                    +HA     IL+ +  +G
Sbjct: 173 RAGKILP--AYELFDEMNRKGLK--------------------AHAGVHKSILRGLCDAG 210

Query: 77  RITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
           + + +    R +         S + P   S  Y ++I+   KS   D A+    +M+D+G
Sbjct: 211 QCSDAVLHFREM---------SKTCP-PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 260

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
             P   ++N++L    K+   +   WL           DV S+  +I G C+   +++A 
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V++++ + G  PNV+ Y +L+DG C+ GD++ A  L RK+ E G      TY  ++   
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR----EV 311
            +    +   +  + M   G  P    Y+ +I  +C  GK+ E   L ++M  R    +V
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440

Query: 312 AC-------------------------------NVVTYNTLICGLCKEMRVQEAERLLDQ 340
           AC                               +VV Y+ LI  LCK  R+ EAE  LD 
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M      P+V+TYN ++DG C +   + AF LF+++++ G  P VVTY+++I +F K  N
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++  M+E    P  VTY+ LI+   ++  ++KAF+++  M   G +P++ TY  
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC    +++A+++   M +    P+ + Y  +I G C       A R+L EM +KG
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +P+  +Y + +  L +       E LL +M
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 251/557 (45%), Gaps = 17/557 (3%)

Query: 23  LPPLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           + P  A   F WA +R G QH     + +L +L+    +H ++ A  L    I G+    
Sbjct: 104 IDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVK---AHQYSQAHDLFRSRIEGQWGGD 160

Query: 82  SFTPRSLLCHLT---------QLFPSSSNPVTKSR--LYESIIDAHLKSRLSDQALFYFH 130
           + T  +L+             +LF   +    K+   +++SI+     +     A+ +F 
Sbjct: 161 TVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFR 220

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
           +M  +   P S T+N+++  + KS   D       E        +V+S+  ++ G C+A 
Sbjct: 221 EMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +  A  +L Q+   G  P+VV YT++I+G CK   ++ A  +  K+ + G      TY 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G      E   KM   G  P+  TYN ++H +C    +    ++   M   
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               + + Y+T+I G CK  +++EA  LL+QM   G  P+V   + LID  C A   D A
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L         +P VV Y++LI A  KA     A   +  M +    P  VTY  ++D 
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +S  +  AF ++  M+ +G  PDV TY ++IH  C   N+  A K+   M E K  P+
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y+ +I G CK G   +A  +  EM   G  PN+ +Y++ I  LC+  K  +A  +L 
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639

Query: 550 QMLKLGLKPSVSLYNIL 566
            M K    P    Y  L
Sbjct: 640 IMRKQSCTPDSITYTCL 656



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 193/380 (50%), Gaps = 5/380 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y +++D   +    D A+    +M + G RP + T+N+++    +    ++         
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C    D  ++  +I G C+AG L +A ++L Q+   G  P+V   ++LID  CK   
Sbjct: 398 QTGCPP--DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I+ A+ L R    +        Y++LI  L K     +   + + M  N   P + TYN 
Sbjct: 456 IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS 515

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++   C   ++++ F LFD MR   V  +VVTY+ +I   CK+  +  A ++L++MK A 
Sbjct: 516 VVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+V+TY+ LI+G C AG  DKAF +F ++   G +P++VTYN LI    K    + A+
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAA 635

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +++  M ++  TP  +TYT LI+    +  +E+A+ +   M+  G  PD  TYG L+  L
Sbjct: 636 EMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695

Query: 466 CMKGNMKEASKLFNSMWETK 485
               N++   +L   M  T+
Sbjct: 696 QKTNNLELVEQLLKEMEATE 715



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G+   +     L++   K     +A  LFR   E        TY+ LI G  + G     
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           +E +++M   G+      +  ++   C+ G+ S+    F EM  +    + VTYNT+I G
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING 239

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L K  R+ +A RLL++M   G +PNV +YN ++ GFC A   + A  L  Q+ + G  P 
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VV+Y  +I    K      A  ++ +M +RG  P+ +TY  L+D F R  D++ A E+  
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G+ P+  TY  ++H  C + +M+ A ++   M +T   P+ + Y+ +I G+CK G
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  LL +M  +G  P++A  S+ I  LC+      A+ LL   + +   P V  Y+
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479

Query: 565 ILYRA 569
           IL  A
Sbjct: 480 ILIHA 484



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 212/447 (47%), Gaps = 27/447 (6%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y  ++DA  K   ++ A+     M++ G  P   T+NSLL    K    ++     S   
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K    +V S+  +I G C+A  +++   +L Q+      P++V + ++ID  CK   ++
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  LF  I E G      TY  L+ GL K+    +  +   E  +  G SP + TYN +
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I   C   +V   +KLF +M    +A + VTY+ +I  LCK   + EA  +L+ M   G 
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             P  ITY  LIDGFC  G  DKA  +   L S G  P VVT+++ I   SK G  + A +
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L+  M   G+ P  VTY  L+  F  +   E A +++ +M++ G  PD  TY  L+  L 
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 1415

Query: 467  MKGNMKE-ASKLFNSMWET----------KLEPN-----DVVYNMMI---FGYCKEGNSY 507
             K + K+  +++  SM +T          KLE +     DV     I   FG C  G+  
Sbjct: 1416 DKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKC--GSPQ 1473

Query: 508  RALRLLGEMNEKGLVPNIASYSSTIGV 534
             A ++   M+++    N+  +S+ +GV
Sbjct: 1474 DARKVFEGMDQR----NVVLWSAMLGV 1496



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 213/517 (41%), Gaps = 99/517 (19%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
            Y ++I    K+    + +    QML +   P   TFN+++  + K+   D  +  F+   
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185

Query: 166  ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNG 224
            E+ C   L  Y+   L+ G C++   ++A  +L ++  + G SP+++ Y ++IDG CK+ 
Sbjct: 1186 ESGCTPNLVTYNS--LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ++RA  LF ++   GL     TY+++I  L K     +     E M  NG  P   TY 
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             LI  +C  G + +  ++   +  +    +VVT++  I  L K  R+++A  LL+ M  A
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL------------- 391
            G+ P+ +TYN L+ GFCDA  T+ A  LF  ++  G  P   TY  L             
Sbjct: 1364 GLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 1423

Query: 392  ---------------------------------------IRAFSKAGNSKMASDLVREME 412
                                                   +  F K G+ + A  +   M+
Sbjct: 1424 LAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMD 1483

Query: 413  ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +R +    V ++ ++  +V     E+AF ++ +M   G  PD  T+  L+   C  G + 
Sbjct: 1484 QRNV----VLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLD 1539

Query: 473  EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
             A   F S+                                    + GL P +  +S  I
Sbjct: 1540 AAVDEFVSI----------------------------------SRDYGLEPGVDHFSCVI 1565

Query: 533  GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +L + G   EAE L   ML +  KPS + +N L  A
Sbjct: 1566 DLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSA 1599



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 231/553 (41%), Gaps = 101/553 (18%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y  +I A  K++   +A  +   M+ +   P   T+NS++  + KS   +  +L F   R
Sbjct: 478  YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               V  DV ++ I+I   C+  +L+ AF++L +++E    P+VV Y++LI+G CK G ++
Sbjct: 538  AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +A  +F+++   G      TY  LI GL K    +   E  E M+    +P   TY CLI
Sbjct: 598  KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-- 345
            +  CN  ++ E +++  EM+ +    + +TY TL+  L K   ++  E+LL +M+     
Sbjct: 658  NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEG 717

Query: 346  -------------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVL 391
                         I  +V+     +       +T    R+ +     GQ SP    Y V 
Sbjct: 718  QWNANGARLHRFVIRGDVLMMAMAVPMAALTSQT----RVLDSKDQQGQFSPRPHQYRVT 773

Query: 392  IRAFSKAG---------NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
              A ++ G         NS+ A +      ER       T    +   VR+ D    F  
Sbjct: 774  AVA-TQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFD 832

Query: 443  YSLMQKSGFSPDVY---------------------------------TYGVLIHGLCMKG 469
            ++  Q+ G++ D Y                                 T+ +LIHGLC  G
Sbjct: 833  WATSQE-GYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAG 891

Query: 470  NMKEASKLFNSMWETKLEPNDVVYNMMIFGYC---------------------------- 501
            ++  A +L   M    +  N +++N++I G C                            
Sbjct: 892  DIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTY 951

Query: 502  --------KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
                    K G    A RL+ +M  KG  PN+ +YSS +  LC+ GK  EA  LL +M +
Sbjct: 952  STIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 1011

Query: 554  LGLKPSVSLYNIL 566
             G  P++  YN +
Sbjct: 1012 SGCSPNIVTYNTI 1024



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 159/394 (40%), Gaps = 67/394 (17%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y ++ID   KS+  D+A   F QML  G+ P   T++ ++  + K       W F  E  
Sbjct: 1232 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK-------WRFMDEAN 1284

Query: 169  CKVEL--------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
              +EL           ++G LI G C+ G+L+KA E+L  L   G  P+VV ++  ID  
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344

Query: 221  CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
             K G + +A  L   +   GLV    TY  L+ G     L +D  + +E M+  G  P  
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 281  YTYNCLIHEYCNEGK------------VSEGFKLFDEMRHR-----------EVAC---- 313
             TY  L+    ++              V  GFKL  E+  +            + C    
Sbjct: 1405 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVD 1464

Query: 314  ---------------------NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
                                 NVV ++ ++       + ++A  L   M + G+ P+ +T
Sbjct: 1465 MFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVT 1524

Query: 353  YNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            +  L+   C AG  D A   F  +  + G  P V  ++ +I    + G    A DL+  M
Sbjct: 1525 FLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGM 1584

Query: 412  EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
              +   PS  T+  L+ ++    D E+A  +  L
Sbjct: 1585 PCK---PSAATWNCLLSAYKICGDFERALRVAEL 1615


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/454 (34%), Positives = 243/454 (53%), Gaps = 15/454 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G  P   TF++LL  +       +   FF +  CK   +V +F  L+ G
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ-ICKP--NVIAFTTLMNG 186

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ E+  +  
Sbjct: 187 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKP 246

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL+K+G Q D    + +MQ  G+SP+L+TYNC+I+ +C+ G+ SE  +L 
Sbjct: 247 NVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLL 306

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R+++ +VVT++ LI  L KE +  EAE L ++M   GI PN ITYN +IDGF   
Sbjct: 307 REMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQ 366

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D A R+F  + + G SP V+T+++LI  +  A        L+ EM  RG+  + +TY
Sbjct: 367 NRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITY 426

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T LI  F +  ++  A ++   M  SG  P+V T   L+ GLC  G +K+A ++F  M +
Sbjct: 427 TTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486

Query: 484 TKL-----------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +K+           EP+   YN++I G   EG    A  L  EM  +GLVP+  +Y+S I
Sbjct: 487 SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  EA  + + M   G  P V  +  L
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTL 580



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+D   K   +  AL    +M + S ++P    +++++  + K          FSE 
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  +++++  +I G C +G  ++A  +L ++ E   SP+VV ++ LI+   K G  
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ L+ ++   G++    TY  +I G  K          +  M   G SP + T++ L
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSIL 394

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   +V +G KL  EM  R +  N +TY TLI G C+   +  A  LL +M  +G+
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            PNV+T N L+DG C+ G+   A  +F  ++            N   P V TYN+LI   
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L  EM  RG+ P  +TY  +ID   +   +++A +M+  M   GFSPDV
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  LI+G C  G + +  ++F  M    +  N + Y  +I G+C+ GN   AL +  E
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQE 634

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           M   G+ P+  +  + +      G W + E+
Sbjct: 635 MISSGVYPDTITIRNML-----TGLWSKEEL 660



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 184/362 (50%), Gaps = 14/362 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++F    +P   +  +  +I+A +K     +A   +++ML  G+ P + T+NS++   
Sbjct: 306 LREMFERKMSPDVVT--FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 152 IKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D    +F+         DV +F ILI G C A  ++   ++L+++   G   N 
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + YT+LI G C+ G++  A  L +++   G+     T   L+ GL  NG  KD  E ++ 
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483

Query: 271 MQ-----------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           MQ            N V P + TYN LI    NEGK SE  +L++EM HR +  + +TYN
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           ++I GLCK+ R+ EA ++ D M   G SP+V+T+  LI+G+C  G       +F ++   
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   + +TY  LI  F + GN   A D+ +EM   G+ P  +T   ++      +++++A
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663

Query: 440 FE 441
            +
Sbjct: 664 VQ 665



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 188/414 (45%), Gaps = 47/414 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K      A   F +M + G+ P   T+N ++     S  + +      E 
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV +F +LI    + G   +A E+ N++   G  PN + Y S+IDG  K   +
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369

Query: 227 ERAKMLF-----------------------------------RKIGELGLVATQHTYTVL 251
           + A+ +F                                    ++   GLVA   TYT L
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH--- 308
           I G  + G      +  ++M  +GV P++ T N L+   CN GK+ +  ++F  M+    
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 309 --------REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
                    +V  +V TYN LICGL  E +  EAE L ++M   G+ P+ ITYN +IDG 
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C     D+A ++F+ + S G SP VVT+  LI  + K G      ++  EM  RGI  + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           +TY  LI  F +  ++  A +++  M  SG  PD  T   ++ GL  K  +K A
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 159/301 (52%), Gaps = 5/301 (1%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            + KM++  +  ++Y++  LI  +C+  K+      F ++       ++VT++TL+ GLC
Sbjct: 98  LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
            E RV EA     Q+      PNVI +  L++G C  G   +A  L +++  +G  P+ +
Sbjct: 158 VEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           TY  ++    K G++  A +L+R+MEE   I P+ V Y+ +ID   +      A  ++S 
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           MQ+ G SP+++TY  +I+G C  G   EA +L   M+E K+ P+ V ++++I    KEG 
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
            + A  L  EM  +G++PN  +Y+S I    +  +   AE +   M   G  P V  ++I
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 566 L 566
           L
Sbjct: 394 L 394



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 296 VSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           + +   LF  M R R + C V+ +  L+  + +  R      L  +M+M  I  N+ ++ 
Sbjct: 57  LDDAIDLFGYMVRSRPLPC-VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFT 115

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  FC   +   A   F ++   G  PS+VT++ L+           A     ++   
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI--- 172

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P+ + +T L++   R   + +A  +   M + G  P+  TYG ++ G+C  G+   A
Sbjct: 173 -CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231

Query: 475 SKLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             L   M E ++++PN V+Y+ +I G  K+G    A  L  EM EKG+ PN+ +Y+  I 
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C  G+W EA+ LL +M +  + P V  +++L  A
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA 327



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 32/244 (13%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    D A  LF  +  +   P V+ +  L+    +     +   L R+ME R
Sbjct: 46  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMR 105

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM------- 467
            I  +  ++TILI  F     +  A   +  + K GF P + T+  L+HGLC+       
Sbjct: 106 RIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA 165

Query: 468 ------------------------KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
                                   +G + EA  L + M E  L+PN + Y  ++ G CK 
Sbjct: 166 LHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 504 GNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           G++  AL LL +M E   + PN+  YS+ I  L +DG+  +A+ L ++M + G+ P++  
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 563 YNIL 566
           YN +
Sbjct: 286 YNCM 289



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 12/248 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL------------IF 150
           V  +  Y ++I    +    + AL    +M+ SGV P   T N+LL            + 
Sbjct: 420 VANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALE 479

Query: 151 VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           + K     K  L  S     VE DV ++ ILI G    G  ++A E+  ++   G  P+ 
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + Y S+IDG CK   ++ A  +F  +G  G      T+T LI G  K G   DG E + +
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCE 599

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G+  +  TY  LIH +C  G ++    +F EM    V  + +T   ++ GL  +  
Sbjct: 600 MGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 659

Query: 331 VQEAERLL 338
           ++ A + L
Sbjct: 660 LKRAVQCL 667


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 180/589 (30%), Positives = 298/589 (50%), Gaps = 39/589 (6%)

Query: 5   KQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHA 64
           K GE   + L   S +A LP + +           L   P  +S  L  +LS+ +   H 
Sbjct: 9   KPGEYLLILLKPYSSIASLPQILS-----------LDSEPVDLSAQLLSILSRPNWQKHP 57

Query: 65  AAQTLILKIISGRITSS---SFTPRSLLC------------HLTQLFPSSSNPVTKSRLY 109
           + + L+  +    ++S    +  P++ L             H    + S  N + ++RL 
Sbjct: 58  SLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117

Query: 110 ---ESIIDAHLKSRLSDQALFY----FHQMLDSG---VRPRSNTFNSLLIFVIKSCSFDK 159
              E I  + +KS  S + + +    F +M   G    +P    +N++L+ + K    D+
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 160 GWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
               + E  N  ++  ++Y+F  ++ G C+ G++ +A    +++ + G  P+   YTSLI
Sbjct: 178 MKTVYLELLNN-QISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLI 236

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C+N  ++ A  +F  + + G    + +YT LI GL + G   +  + +  M  +   
Sbjct: 237 LGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCC 296

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TY  LI+     G+  E   LF+EM+ +    NV TY  LI GLCKE ++ EA ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L +M   G+ P+V+TYN LIDG+C  G  D AF + + ++SN   P+  TYN LI    K
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
                 A  L+ +M ER ++PS +TY  LI    + +D+E A+ + SLM ++G  PD +T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y V I  LC +G ++EA  LF+S+    ++ N+V+Y  +I GYCK G    A  LL  M 
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +PN  +Y+  I  LC++ K  EA  L+ +ML +G+KP+V  Y IL
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/579 (29%), Positives = 275/579 (47%), Gaps = 37/579 (6%)

Query: 23  LPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLL-------------SKMSSHSHAAAQT 68
           L P  A S FNW A R G +H   S S +L +L+             S + S        
Sbjct: 79  LDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVL 138

Query: 69  LILKIISGRITSSSFTPR-SLLCHLTQLFPSS----------------SNPVTKS-RLYE 110
            +L++         F  + +L C+ T L   S                +N ++ +   + 
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFN 198

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW---LFFSEN 167
           ++++ + K     +A  Y  +++ +G+ P + T+ SL++   ++   D  +   L   + 
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C  + +  S+  LI G CEAG +N+A ++   + E    P V  YT LI     +G   
Sbjct: 259 GC--QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ E G     HTYTVLI GL K     +  +   +M   G+ PS+ TYN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC EG + + F++ D M       N  TYN LICGLCK+ +V +A  LL++M    +S
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LI G C   + + A+RL + +  NG  P   TY+V I    K G  + A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ++ +G+  +EV YT LID + +   ++ A+ +   M      P+ YTY VLI GLC 
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +  MKEAS L   M    ++P  V Y ++I    K+G    AL++   M   G  P++ +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ +      G   E + ++ +M + G+ P +  Y +L
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 230/479 (48%), Gaps = 23/479 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +ID   K    D+A     +M + G+ P   T+N+L+    K    D  +       
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C    +  ++  LI G C+   ++KA  +LN++ E   SP+++ Y SLI G CK  D
Sbjct: 397 SNSCGP--NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A  L   + E GLV  Q TY+V I  L K G  ++    ++ ++  GV  +   Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC  GK+   + L + M +     N  TYN LI GLCKE +++EA  L+ +M   G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P V+TY  LI      G  D A ++FN + S G  P V TY   + A+   G  +   
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D++ +M E GI P  VTYT+LID + R     +AF+    M  +G  P +Y   +LI  L
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 466 CMKGNMKE------------------ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             +  MKE                  A KLF  M E     +  +Y  +I G+C++    
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  L+  M E+G+ P+   Y+S +   C+ G + EA  L++ M++ GL P +  Y +L
Sbjct: 755 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/573 (24%), Positives = 241/573 (42%), Gaps = 70/573 (12%)

Query: 26  LKAFSLFNWASRQGLQHTPQSISIIL------------RLLLSKMSSHSHAAAQTLILKI 73
           ++A +LFN    +G +    + ++++            R +LS+MS      +      +
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           I G            +  L +   +S  P T  R Y  +I    K R   +A+   ++ML
Sbjct: 376 IDGYCKEGMIDDAFEILDLME--SNSCGPNT--RTYNELICGLCKKRKVHKAMALLNKML 431

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLN 192
           +  + P   T+NSL+    K    +  +   S  N   +  D +++ + I   C+ G + 
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  + + ++  G   N VIYT+LIDG CK G I+ A  L  ++     +   +TY VLI
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K    K+      KM   GV P++ TY  LI E   +G      K+F+ M      
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF-- 370
            +V TY   +     +  ++E + ++ +M   GI P+++TY  LIDG+   G T +AF  
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 371 ---------------------------------------------------RLFNQLKSN 379
                                                              +LF ++  +
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G +  V  Y  LI  F +    + A  LV  M+ERG++PSE  Y  L+D   +     +A
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             +   M ++G  P + +Y +L+ GL ++G+ ++A  +F+ +       ++V + ++I G
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
             K         L+  M EKG  PN  +YS  I
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 179/377 (47%), Gaps = 19/377 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K    D A     +ML+    P S T+N L+  + K     +     ++ 
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V+  V ++ ILI    + G  + A +V N +  +G+ P+V  YT+ +      G +
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E    +  K+ E G++    TYTVLI G  + GL    F+F + M   G  PSLY  + L
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690

Query: 287 IHEYCNEGKVSE------------------GFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           I    +E ++ E                    KLF++M       +V  Y  LI G C++
Sbjct: 691 IKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 750

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R++EA+ L+  MK  G+SP+   YN L+D  C  G   +A RL + +  NG  P + +Y
Sbjct: 751 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESY 810

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +L+      G+++ A  +   +   G    EV + +LID  ++ D +++  E+  +M++
Sbjct: 811 KLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 870

Query: 449 SGFSPDVYTYGVLIHGL 465
            G  P+  TY +LI GL
Sbjct: 871 KGCQPNPLTYSLLIEGL 887



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 3/167 (1%)

Query: 406 DLVREMEERG---ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           ++ R+M   G     P+   Y  ++ S  +   +++   +Y  +  +  SP++YT+  ++
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +G C  GN+ EA    + + +  L P+   Y  +I G+C+      A  +   M +KG  
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            N  SY++ I  LC+ G+  EA  L   M +    P+V  Y +L  A
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA 308


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 179/588 (30%), Positives = 297/588 (50%), Gaps = 37/588 (6%)

Query: 5   KQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHA 64
           K GE   + L   S +A LP + +           L   P  +S  L  +LS+ +   H 
Sbjct: 9   KPGEYLLILLKPYSSIASLPQILS-----------LDSEPVDLSAQLLSILSRPNWQKHP 57

Query: 65  AAQTLILKIISGRITSS---SFTPRSLLC------------HLTQLFPSSSNPVTKSRLY 109
           + + L+  +    ++S    +  P++ L             H    + S  N + ++RL 
Sbjct: 58  SLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117

Query: 110 ---ESIIDAHLKSRLSDQALFY----FHQMLDSG---VRPRSNTFNSLLIFVIKSCSFDK 159
              E I  + +KS  S + + +    F +M   G    +P    +N++L+ + K    D+
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               + E    ++  ++Y+F  ++ G C+ G++ +A    +++ + G  P+   YTSLI 
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLIL 237

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C+N  ++ A  +F  + + G    + +YT LI GL + G   +  + +  M  +   P
Sbjct: 238 GHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCP 297

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           ++ TY  LI+     G+  E   LF+EM+ +    NV TY  LI GLCKE ++ EA ++L
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKML 357

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ P+V+TYN LIDG+C  G  D AF + + ++SN   P+  TYN LI    K 
Sbjct: 358 SEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A  L+ +M ER ++PS +TY  LI    + +D+E A+ + SLM ++G  PD +TY
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            V I  LC +G ++EA  LF+S+    ++ N+V+Y  +I GYCK G    A  LL  M  
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +PN  +Y+  I  LC++ K  EA  L+ +ML +G+KP+V  Y IL
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/579 (29%), Positives = 275/579 (47%), Gaps = 37/579 (6%)

Query: 23  LPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLL-------------SKMSSHSHAAAQT 68
           L P  A S FNW A R G +H   S S +L +L+             S + S        
Sbjct: 79  LDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVL 138

Query: 69  LILKIISGRITSSSFTPR-SLLCHLTQLFPSS----------------SNPVTKS-RLYE 110
            +L++         F  + +L C+ T L   S                +N ++ +   + 
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFN 198

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW---LFFSEN 167
           ++++ + K     +A  Y  +++ +G+ P + T+ SL++   ++   D  +   L   + 
Sbjct: 199 AMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK 258

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C  + +  S+  LI G CEAG +N+A ++   + E    P V  YT LI     +G   
Sbjct: 259 GC--QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ E G     HTYTVLI GL K     +  +   +M   G+ PS+ TYN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC EG + + F++ D M       N  TYN LICGLCK+ +V +A  LL++M    +S
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LI G C   + + A+RL + +  NG  P   TY+V I    K G  + A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ++ +G+  +EV YT LID + +   ++ A+ +   M      P+ YTY VLI GLC 
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +  MKEAS L   M    ++P  V Y ++I    K+G    AL++   M   G  P++ +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ +      G   E + ++ +M + G+ P +  Y +L
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 230/490 (46%), Gaps = 34/490 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +ID   K    D+A     +M + G+ P   T+N+L+    K    D  +       
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C    +  ++  LI G C+   ++KA  +LN++ E   SP+++ Y SLI G CK  D
Sbjct: 397 SNSCGP--NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A  L   + E GLV  Q TY+V I  L K G  ++    ++ ++  GV  +   Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC  GK+   + L + M +     N  TYN LI GLCKE +++EA  L+ +M   G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P V+TY  LI      G  D A ++FN + S G  P V TY   + A+   G  +   
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D++ +M E GI P  VTYT+LID + R     +AF+    M  +G  P +Y   +LI  L
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 466 CMKGNMKE-----------------------------ASKLFNSMWETKLEPNDVVYNMM 496
             +  MKE                             A KLF  M E     +  +Y  +
Sbjct: 695 SHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGAL 754

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+C++     A  L+  M E+G+ P+   Y+S +   C+ G + EA  L++ M++ GL
Sbjct: 755 IAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGL 814

Query: 557 KPSVSLYNIL 566
            P +  Y +L
Sbjct: 815 LPLLESYKLL 824



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 174/379 (45%), Gaps = 11/379 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K    D A     +ML+    P S T+N L+  + K     +     ++ 
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V+  V ++ ILI    + G  + A +V N +  +G+ P+V  YT+ +      G +
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E    +  K+ E G++    TYTVLI G  + GL    F+F + M   G  PSLY  + L
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVT-YNTL-ICGLCKEMRVQEAERLLDQMKMA 344
           I    +E ++ E           E+  + V+  N++ I  + K +  + A +L ++M   
Sbjct: 691 IKNLSHENRMKE--------TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEH 742

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G + +V  Y  LI GFC     ++A  L + +K  G SPS   YN L+    K G    A
Sbjct: 743 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 802

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             LV  M E G+ P   +Y +L+         EKA  ++  +   G++ D   + VLI G
Sbjct: 803 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 862

Query: 465 LCMKGNMKEASKLFNSMWE 483
           L  +  + E S+L + M E
Sbjct: 863 LLKRDLVDECSELIDIMEE 881



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 125/535 (23%), Positives = 213/535 (39%), Gaps = 84/535 (15%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y  +I    K R   +A+   ++ML+  + P   T+NSL+    K    +  +   S
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N   +  D +++ + I   C+ G + +A  + + ++  G   N VIYT+LIDG CK G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ A  L  ++     +   +TY VLI GL K    K+      KM   GV P++ TY 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 285 CLIHEYCNEGKVSEGFKLFD-----------------------------------EMRHR 309
            LI E   +G      K+F+                                   +M   
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG----- 364
            +  ++VTY  LI G  +      A   L  M   G  P++   + LI            
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703

Query: 365 ------------------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
                                   E + A +LF ++  +G +  V  Y  LI  F +   
Sbjct: 704 RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 763

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV  M+ERG++PSE  Y  L+D   +     +A  +   M ++G  P + +Y +
Sbjct: 764 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 823

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ GL ++G+ ++A  +F+ +       ++V + ++I G  K         L+  M EK 
Sbjct: 824 LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883

Query: 521 LVPN----------IASYSSTIGVL---------CQDGKWPEAEVLLNQMLKLGL 556
                         +A+ +ST G L            G+  +   L+N ++ +GL
Sbjct: 884 ATAQADIACAALMRLAAANSTKGALEDHELRGLSVNHGELTQLSGLVNNLISVGL 938



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T  + +  F+  D+M+    +Y  +  +  SP++YT+  +++G C  GN+ EA    + +
Sbjct: 164 TILMSLSKFLLIDEMKT---VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKI 220

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  L P+   Y  +I G+C+      A  +   M +KG   N  SY++ I  LC+ G+ 
Sbjct: 221 VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRI 280

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            EA  L   M +    P+V  Y +L  A
Sbjct: 281 NEALKLFADMTEDNCCPTVRTYTVLIYA 308


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 284/563 (50%), Gaps = 38/563 (6%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS-----HAAAQTLILKI------ 73
           P  AF +F    R  L+    + + +L  L+   SSHS      A    + L I      
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNT 210

Query: 74  ----ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS-RLSDQALFY 128
               I G    + F       ++   +  S + VT    Y +I+D   K  RL D A   
Sbjct: 211 FNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT----YNTILDTLCKKGRLGD-ARDL 265

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--------DVYSFGI 180
              M   G+ P  NT+N   I V   C    GWL  + N   +EL        DV+++ +
Sbjct: 266 LMDMKSRGLLPNRNTYN---ILVYGYCKM--GWLKEAANV--IELMTQNNLLPDVWTYNM 318

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C  G + +AF++ +++E +   P+VV Y +LI+GC +   I  A  L  ++ E G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     T+ +++    K G   D      KM+ +G SP   TYN LI+ YC  G + E F
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +  DEM  + +  + VT NT++  LC+E +++EA +LL   +  G   + ++Y  LI G+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  D+A +L++++K     PS VTYN +I    + G ++ A   + E+ E G+ P E
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  ++  + R  D+EKAF+ ++ M ++ F PDV+T  +L+ GLCM+G +++A KLFN+
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618

Query: 481 MWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            W +K +  D V YN +I   CKEG    A  LL EM EK L P+  +Y++ I  L   G
Sbjct: 619 -WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677

Query: 540 KWPEAEVLLNQMLKLGLKPSVSL 562
           +  EAE  +++ML+ G  P   L
Sbjct: 678 RIREAEEFMSKMLEKGNLPDQVL 700



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 179/560 (31%), Positives = 289/560 (51%), Gaps = 25/560 (4%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKII 74
           LISR     P    S F WA +  L   P +    L  LL  + SH   + A++L+L  I
Sbjct: 62  LISR-----PNILISFFKWA-QTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFI 115

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +        T R    HL+ L  +S +      L ++ I A+++S     A   F +M  
Sbjct: 116 A--------TDRRHDLHLSILRLTSPSKA----LLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 135 SGVRPRSNTFNSLLIFVIK-----SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
             +RP   T N+LL  +++     S SF +   F    +  +  +V +F I+I G C   
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE-AFNDAIKLGIVPNVNTFNIVIYGYCLEN 222

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
               A E LN + +   SP+ V Y +++D  CK G +  A+ L   +   GL+  ++TY 
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G  K G  K+     E M  N + P ++TYN LI+  CNEG++ E FKL DEM + 
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++  +VV+YNTLI G  +  ++ EA +LL++M   G+ PN +T+N ++  +C  G+ D A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                +++ +G SP  VTYN LI  + KAGN   A   + EM  + +    VT   ++ +
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R   +E+A+++ S  +K G+  D  +YG LI G    GN+  A KL++ M E ++ P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN +I G C+ G + +A+  L E+ E GL+P+  +Y++ +   C++G   +A    N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           +M++   KP V   NIL R 
Sbjct: 583 KMVENSFKPDVFTCNILLRG 602



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 181/398 (45%), Gaps = 32/398 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+  L+     +A     +M + GV+P + T N ++ +  K    D      S   
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA----SNTI 406

Query: 169 CKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            K+E      D  ++  LI G C+AG++ +AF  ++++       + V   +++   C+ 
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +E A  L     + G    + +Y  LI G FK+G      + +++M+   + PS  TY
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           NC+I   C  GK  +     +E+    +  +  TYNT++ G C+E  V++A +  ++M  
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               P+V T N L+ G C  G  +KA +LFN   S G++   VTYN LI +  K G    
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD--------- 454
           A +L+ EMEE+ + P   TY  +I +   S  + +A E  S M + G  PD         
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNE 706

Query: 455 --------------VYTYGVLIHGLCMKGNMKEASKLF 478
                            Y   I  LC +G  K+A ++F
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 24/348 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + K+    +A     +M    ++  S T N++L  + +    ++ +   S  R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +   +D  S+G LI G  + G++++A ++ ++++E    P+ V Y  +I G C+ G  E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A     ++ E GL+  + TY  ++ G  + G  +  F+F+ KM  N   P ++T N L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG + +  KLF+    +  A + VTYNTLI  LCKE R+ +A  LL +M+   + 
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS----------------------- 384
           P+  TYN +I    D+G   +A    +++   G  P                        
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSS 720

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            V Y+  I+     G  K A  +  E +++GIT  + TY  L+D  ++
Sbjct: 721 SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 28/248 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  II    +   ++QA+   +++L+SG+ P   T+N++L    +    +K + F +   
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN  K   DV++  IL++G C  G L KA ++ N     G + + V Y +LI   CK G 
Sbjct: 586 ENSFKP--DVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS------ 279
           ++ A  L  ++ E  L    +TY  +I  L  +G  ++  EF  KM   G  P       
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLD 703

Query: 280 -----------------LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
                               Y+  I E C EGK  +  ++F E + + +  +  TY  L+
Sbjct: 704 KNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763

Query: 323 CGLCKEMR 330
            GL K  +
Sbjct: 764 DGLIKRRK 771


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 245/452 (54%), Gaps = 1/452 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+++ +  S+   +A+    QM  +G +P + TFN+L+  +       +          K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             + D+ ++G+++ G C+ GD + AF +LN++E+    P V+IYT++IDG CKN  ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF+++   G+     TY+ LI  L   G   D       M    ++P ++T++ LI  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +  EGK+ E  KL+DEM  R +  ++VTY++LI G C   R+ EA+++ + M      P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V++Y+ LI GFC A   D+   LF ++   G   + VTY  LI+   +AG+  MA ++ +
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM   G+ P+ +TY  L+D   ++  +EKA  ++  +Q+S   P +YTY ++I G+C  G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +++   LF ++    ++P+ V YN MI G+C++G+   A  L  EM E G +PN   Y+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           + I    +DG    +  L+ +M   G     S
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDAS 607



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 221/446 (49%), Gaps = 3/446 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGI 180
           D A+  F +M+ S   P    F+ LL  + K   FD   +   E    + +  + Y++ I
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV-VISLGEQMQNLGMPHNHYTYSI 121

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI   C    L  A  VL ++ ++G+ PN+V  +SL++G C +  I  A  L  ++   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 T+  LI GLF +    +     ++M   G  P L TY  +++  C  G     F
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L ++M   ++   V+ Y T+I GLCK   + +A  L  +M+  GI PNV+TY+ LI   
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C+ G    A RL + +     +P V T++ LI AF K G    A  L  EM +R I PS 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY+ LI+ F   D +++A +M+  M      PDV +Y  LI G C    + E  +LF  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L  N V Y  +I G  + G+   A  +  EM   G+ PNI +Y++ +  LC++GK
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A V+   + +  ++P++  YNI+
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIM 507



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 223/457 (48%), Gaps = 10/457 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + Q+F +   P T +  + ++I        + +A+    +M+  G +P   T+  ++  +
Sbjct: 174 VDQMFVTGYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D  ++  ++  + K+E  V  +  +I G C+   ++ A  +  ++E  G  PNV
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y+SLI   C  G    A  L   + E  +     T++ LI    K G   +  + Y++
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M    + PS+ TY+ LI+ +C   ++ E  ++F+ M  +    +VV+Y+TLI G CK  R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V E   L  +M   G+  N +TY  LI G   AG+ D A  +F ++ S+G  P+++TYN 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+    K G  + A  +   ++   + P+  TY I+I+   ++  +E  ++++  +   G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PDV  Y  +I G C KG+ +EA  LF  M E    PN   YN +I    ++G+   + 
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 511 RLLGEMNEKGLVPNIASYSSTIGV---LCQDGKWPEA 544
            L+ EM   G     A  +STIG+   +  DG+  ++
Sbjct: 592 ELIKEMRSCGF----AGDASTIGLVTNMLHDGRLDKS 624



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 195/411 (47%), Gaps = 35/411 (8%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A  +  ++ +    P+++ ++ L+    K    +    L  ++  LG+    +TY++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI    +            KM   G  P++ T + L++ YC+  ++SE   L D+M    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              N VT+NTLI GL    +  EA  L+D+M   G  P+++TY  +++G C  G+TD AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 371 -----------------------------------RLFNQLKSNGQSPSVVTYNVLIRAF 395
                                               LF ++++ G  P+VVTY+ LI   
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    AS L+ +M ER I P   T++ LID+FV+   + +A ++Y  M K    P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI+G CM   + EA ++F  M      P+ V Y+ +I G+CK       + L  E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M+++GLV N  +Y++ I  L Q G    A+ +  +M+  G+ P++  YN L
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 158/301 (52%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+MQ  G+  + YTY+ LI+ +C   ++     +  +M       N+VT ++L+ G C  
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ EA  L+DQM + G  PN +T+N LI G     +  +A  L +++ + G  P +VTY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTY 224

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            V++    K G++ +A  L+ +ME+  + P  + YT +ID   ++  M+ A  ++  M+ 
Sbjct: 225 GVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMET 284

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+V TY  LI  LC  G   +AS+L + M E K+ P+   ++ +I  + KEG    
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L  EM ++ + P+I +YSS I   C   +  EA+ +   M+     P V  Y+ L +
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIK 404

Query: 569 A 569
            
Sbjct: 405 G 405



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 15/308 (4%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           K  +++ EK+  NG+S               E K+ +   LF EM       +++ ++ L
Sbjct: 43  KTSYDYREKLSRNGLS---------------ELKLDDAVALFGEMVKSRPFPSIIEFSKL 87

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  + K  +      L +QM+  G+  N  TY+ LI+ FC   +   A  +  ++   G 
Sbjct: 88  LSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY 147

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P++VT + L+  +  +     A  LV +M   G  P+ VT+  LI      +   +A  
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVA 207

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M   G  PD+ TYGV+++GLC +G+   A  L N M + KLEP  ++Y  +I G C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLC 267

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K  +   AL L  EM  KG+ PN+ +YSS I  LC  G+W +A  LL+ M++  + P V 
Sbjct: 268 KNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 562 LYNILYRA 569
            ++ L  A
Sbjct: 328 TFSALIDA 335


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 150/464 (32%), Positives = 251/464 (54%), Gaps = 3/464 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +II+   K +  ++A+    +M  S   P S T+  L+  + K    ++      E  
Sbjct: 13  YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +E+DV  +  LI G C  G L++   + +++ E G SPNVV+Y+ LI+G CK G   
Sbjct: 73  RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   + E G+    +TYT +I GL K+G  +   + ++ M   G  PS  TYN LI
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLI 192

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-- 345
           +  C EG + + FK+F+ M  +     VV+YNTLI GLC   ++ EA +L   +   G  
Sbjct: 193 NGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNY 252

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+VIT+N +I G C  G  DKA  +++ +   G   ++ T ++LI  + K+G    A 
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAM 312

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L + + + G+ PS  TY+++ID F +   +  A  ++S M+ SG SP ++ Y  L+  L
Sbjct: 313 ELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASL 372

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C + ++++A +LF  M E+  EP+ + +N+MI G  K G+ + A  LL +M + GL P+ 
Sbjct: 373 CKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDA 432

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +YSS I  L + G+  EA+   + M+  G+ P   +Y+ L + 
Sbjct: 433 YTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 173/322 (53%), Gaps = 2/322 (0%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +Y  +I GL K    +   +   +M+ +   P+ +TY  L+   C EG+V E  +L  EM
Sbjct: 12  SYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           + + +  +VV Y+TLI G C +  +   + L D+M   GISPNV+ Y+ LI+GFC  G  
Sbjct: 72  KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLW 131

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  + + +   G  P V TY  +I    K G ++ A DL   M E+G  PS VTY +L
Sbjct: 132 REATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVL 191

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK- 485
           I+   +   +  AF+++  M + G   +V +Y  LI GLC  G + EA KLF+S+ E   
Sbjct: 192 INGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGN 251

Query: 486 -LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            +EP+ + +N +I G CKEG   +A+ +   M E+G   N+ +    IG   + G   +A
Sbjct: 252 YVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKA 311

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             L  ++ KLGL PS + Y+++
Sbjct: 312 MELWKRVHKLGLVPSSTTYSVM 333



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P++V Y ++I+G CK   +E+A  L  ++          TY +L+ GL K G  ++    
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             +M+  G+   +  Y+ LI  +C++G +  G  LFDEM  + ++ NVV Y+ LI G CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           +   +EA  +L  M   GI P+V TY  +I G C  G   KA  LF+ +   G+ PS VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YNVLI    K G    A  +   M E+G     V+Y  LI     +  +++A +++S + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 448 KSG--FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           + G    PDV T+  +I GLC +G + +A +++++M E     N    +++I  Y K G 
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             +A+ L   +++ GLVP+  +YS  I   C+      A+ L ++M   GL P++  YN 
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367

Query: 566 L 566
           L
Sbjct: 368 L 368



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 158/287 (55%), Gaps = 2/287 (0%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+   + P + +YN +I+  C E ++ +   L  EM       N  TY  L+ GLCKE R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V+EA RLL +MK  G+  +V+ Y+ LI GFC  G  D+   LF+++   G SP+VV Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F K G  + A+ ++  M ERGI P   TYT +I    +     KA +++ LM + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P   TY VLI+GLC +G + +A K+F +M E       V YN +I G C  G    A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 511 RLLGEMNEKG--LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +L   + E G  + P++ ++++ I  LC++G+  +A  + + M++ G
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 12/426 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I+   K  L  +A    H M + G++P   T+  ++  + K     K    F   
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  E    ++ +LI G C+ G +  AF++   + E G    VV Y +LI G C NG +
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236

Query: 227 ERAKMLFRKIGELGLVATQH--TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + A  LF  + E G        T+  +I GL K G      E Y+ M   G   +L+T +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI EY   G + +  +L+  +    +  +  TY+ +I G CK   +  A+ L  +MK++
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+SP +  YN L+   C     ++A RLF ++K +   P  +++N++I    KAG+   A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L+ +M++ G+TP   TY+  I+   +   ME+A   +  M  SG +PD + Y  LI G
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
             +   ++E   L   M +  +  +  + N ++   C        + LL         PN
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL---------PN 527

Query: 525 IASYSS 530
            +S SS
Sbjct: 528 FSSESS 533



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 1/290 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           + ++I    K    D+A+  +  M++ G      T + L+   IKS   DK   L+   +
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH 319

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +     ++ ++I G C+   LN A  + ++++  G SP +  Y +L+   CK   +E
Sbjct: 320 KLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLE 379

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A+ LF+++ E        ++ ++I G  K G      E    MQ  G++P  YTY+  I
Sbjct: 380 QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFI 439

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +     G++ E    FD M    +  +   Y++LI G      ++E   LL QM   G+ 
Sbjct: 440 NRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVI 499

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++   N ++   C++ E      L     S     + ++ + L+    K
Sbjct: 500 LDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQK 549


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 238/460 (51%), Gaps = 5/460 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           +ID   KSR  D+A+  F QM+D  + P   T+ +L+  + K     + +  F E R K 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIERA 229
               V ++  +I G C+ G +  A  + + +    GF P VV Y++LIDG C++ ++++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L  ++   G      TY  L+  L   G  K+ F   E+M  NG  P L T+  +I  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 290 YCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
            C EG++   F++ DEM   E  ++ +V+T+N+++ GLCKE R+ +A  +  +    G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY+ LIDG     + D+A +L  ++   G   + VTY+ ++    K G  + A  +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R+M + G  P  VTY  LID F +   + +A  +   M ++GF P V TY  L HGLC 
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIA 526
            G   EA ++ + M      PN + Y+ ++ G CK G    AL    +M    +V P++ 
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +YS+ I  LC+ GK  EA   L +M++ G  P V  ++IL
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSIL 460



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 223/455 (49%), Gaps = 22/455 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   +    D+      +M   G  P + T+N+L+  ++      + +    +  
Sbjct: 104 YSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL--EEMGFSPNVVIYTSLIDGCCKN 223
            N C  EL   +FG++IKG C+ G++  AF V++++   E G SP+V+ + S++DG CK 
Sbjct: 164 ANGCPPEL--ITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             I  A  +F++  E G      TY+ LI GL K     +  +   KM   G   +  TY
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + ++      G++ +   +  +MR      + VTYNTLI G  K  R++EA  LL +M  
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--- 400
           AG  P+V+TY  L  G C +G  D+A  + + + + G +P+ +TY+ ++    KAG    
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401

Query: 401 -----SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                 KMA D V       + P  + Y+ LID   ++  +++A+E    M ++G  PDV
Sbjct: 402 ALGYFEKMARDEV-------VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDV 454

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+ +LI+GLC  G +    +LF  M E    P+ V Y  ++   C+      A  L  +
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           M   GL P+ ++  + I  L +  +  +A+ + ++
Sbjct: 515 MRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 140/281 (49%), Gaps = 6/281 (2%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +N VT    Y +++D  LK    + A+    QM D+G  P + T+N+L+    K     +
Sbjct: 276 ANTVT----YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                 E         V ++  L  G C +G  ++A E+L+ +   G +PN + Y+S++D
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           G CK G +  A   F K+    +VA     Y+ LI GL K G   + +EF E+M   G  
Sbjct: 392 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P + T++ LI+  C+ G++  G +LF  M  R    ++VTY TL+  LC+  RV EA  L
Sbjct: 452 PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDL 511

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             QM+  G+SP+  T   +I G  +    + A R+ ++  S
Sbjct: 512 FQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I    K+     A  L ++M ++ I P  VTY  LID   +   +++A++++   +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRA 509
             P V TY  +I GLC  G ++ A  L++ M       P  V Y+ +I G C++    + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +LL EM  +G  PN  +Y++ +  L   G+  EA  LL QM   G  P +  + ++ + 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 247/464 (53%), Gaps = 3/464 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFF 164
           S  Y ++I+   KS   D A+    +M+D+G  P   ++N++L    K+   +   WL  
Sbjct: 44  SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 103

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                    DV S+  +I G C+   +++A  V++++ + G  PNV+ Y +L+DG C+ G
Sbjct: 104 QMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 163

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTY 283
           D++ A  L RK+ E G      TY  ++ GL          + +++M+ +G   P ++TY
Sbjct: 164 DLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTY 223

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + ++      GKV +  +L + M  +  + NVVTY++L+ GLCK  ++ EA  LL +M  
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           +G SPN++TYN +IDG C  G  D+A+ L  ++   G  P+VVTY VL+ AF K G ++ 
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  LV  M E+G  P+  TY  L+D F + D++E+A ++ S M + G  P+V +Y  +I 
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 403

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC    + E   L   M      P+ V +N +I   CK      A  L   + E G  P
Sbjct: 404 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
           N+ +Y+S +  LC+  ++ +AE LL +M  K G  P +  YN +
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/464 (32%), Positives = 245/464 (52%), Gaps = 3/464 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+      R  D AL  F +M +SG   P   T+++++  ++KS   D         
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM 246

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K    +V ++  L+ G C+AG L++A  +L ++   G SPN+V Y ++IDG CK G I
Sbjct: 247 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI 306

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  ++ + G      TYTVL+    K G  +D     E M   G  P+L+TYN L
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  +C + +V    +L   M  +    NVV+YNT+I GLCK  +V E   LL+QM     
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+++T+N +ID  C     D A+ LFN ++ +G +P++VTYN L+    K+     A  
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486

Query: 407 LVREM-EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           L+REM  ++G +P  +TY  +ID   +S  +++A++++  M   G +PD  TY ++I  L
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    M EA+ +   M +   +P  + Y  +I G+CK GN  +AL +L  +  KG  P++
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++S  I  L + G+  +A  LL  ML+ GL P    YN L + 
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 245/477 (51%), Gaps = 16/477 (3%)

Query: 90  CHLTQLFPS---SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           C L +   S   S N VT    Y S++    K+   D+A     +M  SG  P   T+N+
Sbjct: 240 CRLVEAMVSKGCSPNVVT----YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 147 LLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           ++    K    D+ +    E     C  + +V ++ +L+   C+ G    A  ++  + E
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGC--QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G+ PN+  Y SL+D  CK  ++ERA  L   + + G V    +Y  +I GL K     +
Sbjct: 354 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
           G    E+M  N   P + T+N +I   C   +V   ++LF+ ++      N+VTYN+L+ 
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473

Query: 324 GLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
           GLCK  R  +AE LL +M +  G SP++ITYN +IDG C +   D+A++LF Q+ S+G +
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  VTY+++I +  K      A++++  M + G  P  +TY  LID F ++ +++KA E+
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             L+   G  PDV T+ + I  L  +G +++A +L  +M    L P+ V YN ++ G+C 
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 653

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE--AEVLLNQMLKLGLK 557
              +  A+ L   M + G  P+ A+Y++ +G L     + +  AEV    M+  G K
Sbjct: 654 ASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEV-SKSMVDTGFK 709



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 237/461 (51%), Gaps = 3/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +++SI+     +     A+ +F +M  +   P S T+N+++  + KS   D       E 
Sbjct: 12  VHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                  +V+S+  ++ G C+A  +  A  +L Q+   G  P+VV YT++I+G CK   +
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  +  K+ + G      TY  L+ G  + G      E   KM   G  P+  TYN +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 287 IHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +H  C+  K+    +LF EM        +V TY+T++  L K  +V +A RL++ M   G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            SPNV+TY+ L+ G C AG+ D+A  L  ++  +G SP++VTYN +I    K G    A 
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ EM + G  P+ VTYT+L+D+F +    E A  +  +M + G+ P+++TY  L+   
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C K  ++ A +L +SM +    PN V YN +I G CK    +  + LL +M     VP+I
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++++ I  +C+  +   A  L N + + G  P++  YN L
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 193/363 (53%), Gaps = 2/363 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G   +  ++ S++ G C  G    A + FR++ +        TY  +I GL K+    D 
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDA 63

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               E+M  NG +P++++YN ++H +C   +V     L ++M  R    +VV+Y T+I G
Sbjct: 64  IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVING 123

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK  +V EA R++D+M   G  PNVITY  L+DGFC  G+ D A  L  ++   G  P+
Sbjct: 124 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 183

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV-TYTILIDSFVRSDDMEKAFEMY 443
            +TYN ++           A  L +EMEE G  P +V TY+ ++DS V+S  ++ A  + 
Sbjct: 184 AITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 243

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G SP+V TY  L+HGLC  G + EA+ L   M  +   PN V YN +I G+CK 
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 303

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A  LL EM + G  PN+ +Y+  +   C+ GK  +A  L+  M++ G  P++  Y
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363

Query: 564 NIL 566
           N L
Sbjct: 364 NSL 366



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 215/435 (49%), Gaps = 1/435 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G++  +    S+L  +  +       L F E       D  ++  +I G  ++  L+ A 
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAI 64

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            +L ++ + GF+PNV  Y +++ G CK   +E A  L  ++   G      +YT +I GL
Sbjct: 65  RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGL 124

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K     +     +KM   G  P++ TY  L+  +C  G +    +L  +M  R    N 
Sbjct: 125 CKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNA 184

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           +TYN ++ GLC   ++  A +L  +M+ +G   P+V TY+ ++D    +G+ D A RL  
Sbjct: 185 ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + S G SP+VVTY+ L+    KAG    A+ L++ M   G +P+ VTY  +ID   +  
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A+ +   M   G  P+V TY VL+   C  G  ++A  L   M E    PN   YN
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++  +CK+    RA +LL  M +KG VPN+ SY++ I  LC+  K  E  +LL QML  
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424

Query: 555 GLKPSVSLYNILYRA 569
              P +  +N +  A
Sbjct: 425 NCVPDIVTFNTIIDA 439



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 3/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++DA  K   ++ A+     M++ G  P   T+NSLL    K    ++     S   
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 387

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + +V S+  +I G C+A  +++   +L Q+      P++V + ++ID  CK   ++
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A  LF  I E G      TY  L+ GL K+    +  +   E  +  G SP + TYN +
Sbjct: 448 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C   +V   +KLF +M    +A + VTY+ +I  LCK   + EA  +L+ M   G 
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P  ITY  LIDGFC  G  DKA  +   L S G  P VVT+++ I   SK G  + A +
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M   G+ P  VTY  L+  F  +   E A +++ +M++ G  PD  TY  L+  L 
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687

Query: 467 MKGNMKE-ASKLFNSMWETKLEPN 489
            K + K+  +++  SM +T  + N
Sbjct: 688 DKKSYKDLLAEVSKSMVDTGFKLN 711



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 70/296 (23%)

Query: 341 MKMAGISPNVITYNKLIDGFCDAGET---------------------------------- 366
           M   G+  +   +  ++ G CDAG+                                   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A RL  ++  NG +P+V +YN ++  F KA   + A  L+ +M  RG  P  V+YT +
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+   + D +++A  +   M + G  P+V TYG L+ G C  G++  A +L   M E   
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 487 EPNDVVYNMMIFGYC------------------------------------KEGNSYRAL 510
            PN + YN ++ G C                                    K G    A 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           RL+  M  KG  PN+ +YSS +  LC+ GK  EA  LL +M + G  P++  YN +
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/398 (35%), Positives = 224/398 (56%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LI G C    +++A  ++ ++ E G  PNVV Y S+++G CK+GD   A  
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L RK+ E  + A   TY+ +I  L ++G        +++M+  G+  SL TYN L+   C
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK ++G +L  +M  R++  NV+T+N LI    KE ++QEA  L  +M   GISPN I
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L+DG+C      +A  + + +  N  SP +VT+  LI+ + K         L R++
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+  + VTY+IL+  F +S  +E A E++  M   G  PDV TYG+L+ GLC  G +
Sbjct: 372 SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKL 431

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++F  + ++K+  + V+Y ++I G CK G    A  L   +  KG+ PN+ +Y+  
Sbjct: 432 EKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 491

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+ G   EA +LL +M + G +P+   YN L RA
Sbjct: 492 ISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 241/434 (55%), Gaps = 5/434 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCE 187
           +++  G  P + TFN+L+  +       +  +  +   EN C  + +V ++  ++ G C+
Sbjct: 125 KVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC--QPNVVTYNSIVNGICK 182

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GD + A ++L +++E     +V  Y+++ID  C++G I+ A  LF+++   G+ ++  T
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ GL K G   DG +  + M    + P++ T+N LI  +  EGK+ E  +L+ EM 
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + ++ N +TYN+L+ G C + R+ EA  +LD M     SP+++T+  LI G+C     D
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +  +LF ++   G   + VTY++L++ F ++G  ++A +L +EM   G+ P  +TY IL+
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D    +  +EKA E++  +QKS  + D+  Y ++I G+C  G +++A  LF S+    ++
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN + Y +MI G CK+G+   A  LL +M E G  PN  +Y++ I    +DG    +  L
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKL 542

Query: 548 LNQMLKLGLKPSVS 561
           + +M   G     S
Sbjct: 543 IEEMKSCGFSADAS 556



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 223/427 (52%), Gaps = 4/427 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
           L+S++S +A+    +M+++G +P   T+NS++  + KS   S     L   + R  V+ D
Sbjct: 147 LESKVS-EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDER-NVKAD 204

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V+++  +I   C  G ++ A  +  ++E  G   ++V Y SL+ G CK G       L +
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLK 264

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +    ++    T+ VLI    K G  ++  E Y++M   G+SP+  TYN L+  YC + 
Sbjct: 265 DMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQN 324

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++SE   + D M     + ++VT+ +LI G CK  RV E  +L  ++   G+  N +TY+
Sbjct: 325 RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYS 384

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ GFC +G+ + A  LF ++ S G  P V+TY +L+      G  + A ++  ++++ 
Sbjct: 385 ILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 444

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +    V YTI+I+   +   +E A+ ++  +   G  P+V TY V+I GLC KG++ EA
Sbjct: 445 KMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           + L   M E   EPND  YN +I  + ++G+   + +L+ EM   G   + +S    I +
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 564

Query: 535 LCQDGKW 541
           L     W
Sbjct: 565 LSSAVWW 571



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 151/309 (48%)

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
           + D  + +++M  +   PSL  ++       +  + +       +M    +A N+ T N 
Sbjct: 46  EDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNI 105

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           +I   C+  +   A  +L ++   G  P+  T+N LI+G C   +  +A  L  ++  NG
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P+VVTYN ++    K+G++ +A DL+R+M+ER +     TY+ +IDS  R   ++ A 
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  M+  G    + TY  L+ GLC  G   +  +L   M   K+ PN + +N++I  +
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            KEG    A  L  EM  KG+ PN  +Y+S +   C   +  EA  +L+ M++    P +
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345

Query: 561 SLYNILYRA 569
             +  L + 
Sbjct: 346 VTFTSLIKG 354


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/566 (29%), Positives = 297/566 (52%), Gaps = 37/566 (6%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI 73
           L+  SR+ +LP L A  L +   R  ++ + Q+ + +L  L ++  S S  A+      I
Sbjct: 138 LSAYSRL-RLPHLAAQLLHSLRRRVRVRPSLQAANAVLSAL-ARSPSTSPQASLDAFRSI 195

Query: 74  ISGRITSSSFTPRSLLCHL----------------TQLFPSSSNPVTKSRLYESIIDAHL 117
           ++ R+  + +T  +LL H                  Q F  S + VT    Y ++++AH 
Sbjct: 196 VALRLHPNHYT-FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVT----YNTLLNAHC 250

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV------ 171
           +  +  +A     +M   GV P   T+N+L+     S     GW+  +    +       
Sbjct: 251 RKGMLGEARALLARMKKDGVAPTRPTYNTLV-----SAYARLGWIKQATKVVEAMTANGF 305

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAK 230
           E D++++ +L  G C+AG +++AF + +++E +G   P+VV Y +L D C K      A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ E G+ AT  T+ ++I GL K+G  +       KM  +G++P + TYN LIH +
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +++ + L DEM  R +  +  T NT++  LCKE R +EA+ LL      G  P+ 
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++Y  ++  +     ++ A RL++++     +PS+ TYN LI+  S+ G  K A D + E
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           + E+G+ P + TY I+I ++ +  D+E AF+ ++ M ++ F PDV T   L++GLC+ G 
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 471 MKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           + +A KLF S W  K +  DV+ YN +I   CK+G+   AL    +M  +GL P+  +Y+
Sbjct: 606 LDKALKLFES-WVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLG 555
             +  L + G+  EA+ +L+++ + G
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESG 690



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 36/426 (8%)

Query: 139 PRSNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   T+N+L     K  CS D   L        V+  + +  I+IKG C+ G+L  A   
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           LN++ + G +P+V+ Y +LI   CK G+I +A  L  ++   GL     T   ++  L K
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
               ++     +     G  P   +Y  ++  Y  E       +L+DEM  +++  ++ T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YNTLI GL +  R++EA   L+++   G+ P+  TYN +I  +C  G+ + AF+  N++ 
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            N   P VVT N L+      G    A  L     E+G     +TY  LI +  +  D++
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK----------LE 487
            A   ++ M+  G  PD +TY V++  L   G  +EA  + + + E+           L+
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLK 702

Query: 488 PNDV-------------------------VYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           P+ V                          Y  ++ G C  G    A  +L EM +KG+ 
Sbjct: 703 PSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762

Query: 523 PNIASY 528
            + ++Y
Sbjct: 763 VDSSTY 768



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 180/383 (46%), Gaps = 9/383 (2%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIK 183
           AL   ++M D G+ P   T+N+L+    K+ +  K +    E  R  ++LD ++   ++ 
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLY 458

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C+     +A  +L    + GF P+ V Y +++    K  + E A  L+ ++ E  L  
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           +  TY  LI GL + G  K+  +   ++   G+ P   TYN +IH YC EG +   F+  
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           ++M       +VVT NTL+ GLC   ++ +A +L +     G   +VITYN LI   C  
Sbjct: 579 NKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKD 638

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D A   F  +++ G  P   TYNV++ A S+AG ++ A +++ ++ E G      + 
Sbjct: 639 GDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSS 698

Query: 424 TIL----IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +L    +D      D +   E     Q S        Y  L++GLC  G  KEA  + +
Sbjct: 699 PLLKPSSVDEAESGKDAKTEEETVENPQDSASE----AYTKLVNGLCTSGQFKEAKAILD 754

Query: 480 SMWETKLEPNDVVYNMMIFGYCK 502
            M +  +  +   Y  ++ G  K
Sbjct: 755 EMMQKGMSVDSSTYITLMEGLVK 777


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 178/533 (33%), Positives = 272/533 (51%), Gaps = 58/533 (10%)

Query: 35  ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ 94
           +SR  +  + + IS +   LLS ++  +    QT IL  +SG     SF   S++  +  
Sbjct: 47  SSRSNIGQSSKPISRVQTPLLSFINYSTQE--QTQILLSVSG----DSFCANSIIVDIL- 99

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           ++  + N               L++RL  +A   F +  D G++    + N L+  ++K 
Sbjct: 100 VWAYAKN---------------LRTRLGFEA---FKRASDYGLKLSVTSCNPLMSGLVKV 141

Query: 155 CSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
               D  +++    R ++E  + SF I+I G C+ G LNKA +++  ++  G S NV+ Y
Sbjct: 142 GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITY 201

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            +LIDG CK G          KIG++                     + D     ++M+ 
Sbjct: 202 NTLIDGYCKMG----------KIGKM--------------------YKADAI--LKEMRA 229

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G+ P+  T+N LI  +C +  VS   K+F EM  + V  NVVTYN+LI GLC   +V E
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  L DQM  + + PN+IT+N L++GFC      +A  LF+ +   G +P+V TYN+LI 
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A+ K  N + A  L R M  +G+ P   TY  LI    R  D+E A  + S M       
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY +LI  LC KG MK+A +L + M    L+P+ + YN MI GYCKEGN   AL L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M + G + N+A+Y+  I   C+  K  +A  LLN+ML+ GL P+   Y I+
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 215/379 (56%), Gaps = 3/379 (0%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            FE   +  + G   +V     L+ G  K G+I   + +++++    +  T  ++ ++I 
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEMRHRE 310
           GL K G      +  E M++ GVS ++ TYN LI  YC  GK+ + +K   +  EMR   
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  N VT+N LI G CK+  V  A ++  +M   G+ PNV+TYN LI+G C+ G+ ++A 
Sbjct: 232 ICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L +Q+ ++   P+++T+N L+  F K    K A +L  +M ++GITP+  TY ILID++
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            + ++ME AF +Y +M   G  PDV TY  LI GLC KG+++ A  L + M    L+ + 
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL 411

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN++I   C +G   +ALRLL EM  KGL P+  +Y++ I   C++G    A  L +Q
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M K+G   +V+ YN+L + 
Sbjct: 472 MEKVGRLANVATYNVLIKG 490



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 164/332 (49%), Gaps = 39/332 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +ID   K +    A+  F +M   GV+P   T+NS                      
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS---------------------- 276

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                       LI G C  G +N+A  + +Q+      PN++ + +L++G CKN  +++
Sbjct: 277 ------------LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQ 324

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  + + G+     TY +LI    K+   +D F  Y  M   GV P + TYNCLI 
Sbjct: 325 AGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C +G +     L  EM  + +  +++TYN LI  LC +  +++A RLLD+M   G+ P
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +TYN +IDG+C  G    A  L +Q++  G+  +V TYNVLI+ F K    + A+ L+
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLL 504

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            EM E+G+ P+ +TY I+ +       MEK F
Sbjct: 505 NEMLEKGLIPNRMTYEIVTEEM-----MEKGF 531



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 3/259 (1%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N +  + L+    K +R +       +    G+  +V + N L+ G    GE      ++
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++      P+++++N++I    K G    A D++ +M+ RG++ + +TY  LID + + 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 434 DDMEKAFEMYSL---MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             + K ++  ++   M+  G  P+  T+ +LI G C   N+  A K+F  M    ++PN 
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I G C  G    A  L  +M    L PNI ++++ +   C++    +A  L + 
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M K G+ P+V+ YNIL  A
Sbjct: 332 MPKQGITPNVTTYNILIDA 350



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 1/191 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +IDA+ K    + A   +  ML  GV P  +T+N L+  + +    +      SE  
Sbjct: 344 YNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMD 403

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+ ++ ILI   C  G++ KA  +L+++   G  P+ + Y ++IDG CK G++ 
Sbjct: 404 TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ ++G +A   TY VLI G  K    +D      +M   G+ P+  TY  + 
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT 523

Query: 288 HEYCNEGKVSE 298
            E   +G V +
Sbjct: 524 EEMMEKGFVPD 534


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 244/452 (53%), Gaps = 1/452 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+++ +  S+   +A+    QM  +G +P + TFN+L+  +       +          K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             + D+ ++G+++ G C+ GD + AF +LN++E+    P V+IY ++IDG CK   ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF+++   G+     TY+ LI  L   G   D       M    ++P ++T++ LI  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +  EGK+ E  KL+DEM  R +  ++VTY++LI G C   R+ EA+++ + M      P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TYN LI GFC     ++   +F ++   G   + VTYN+LI+   +AG+  MA ++ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM   G+ P+ +TY  L+D   ++  +EKA  ++  +Q+S   P +YTY ++I G+C  G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +++   LF ++    ++P+ V YN MI G+C++G+   A  L  EM E G +PN   Y+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           + I    +DG    +  L+ +M   G     S
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDAS 607



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 238/498 (47%), Gaps = 10/498 (2%)

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS---------DQALFYF 129
           T+  F  RSL+        S S      R +        + +LS         D A+  F
Sbjct: 10  TAKRFVHRSLVVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALF 69

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
            +M+ S   P    F+ LL  + K   FD       +     +  + Y++ ILI   C  
Sbjct: 70  GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
             L  A  VL ++ ++G+ PN+V  +SL++G C +  I  A  L  ++   G      T+
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI GLF +    +     ++M   G  P L TY  +++  C  G     F L ++M  
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++   V+ YNT+I GLCK   + +A  L  +M+  GI PNV+TY+ LI   C+ G    
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RL + +     +P V T++ LI AF K G    A  L  EM +R I PS VTY+ LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            F   D +++A +M+  M      PDV TY  LI G C    ++E  ++F  M +  L  
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N V YN++I G  + G+   A  +  EM   G+ PNI +Y++ +  LC++GK  +A V+ 
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 549 NQMLKLGLKPSVSLYNIL 566
             + +  ++P++  YNI+
Sbjct: 490 EYLQRSKMEPTIYTYNIM 507



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K +  D AL  F +M   G+RP   T++SL+  +   C++    D   L 
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL---CNYGRWSDASRLL 314

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  DV++F  LI    + G L +A ++ +++ +    P++V Y+SLI+G C +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY  LI G  K    ++G E + +M   G+  +  TY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI      G      ++F EM    V  N++TYNTL+ GLCK  ++++A  + + ++ 
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P + TYN +I+G C AG+ +  + LF  L   G  P VV YN +I  F + G+ + 
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L +EM+E G  P+   Y  LI + +R  D E + E+   M+  GF+ D  T G++ +
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614

Query: 464 GL 465
            L
Sbjct: 615 ML 616



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 157/301 (52%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+MQ  G+  + YTY+ LI+ +C   ++     +  +M       N+VT ++L+ G C  
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ EA  L+DQM + G  PN +T+N LI G     +  +A  L +++ + G  P +VTY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            V++    K G++ +A +L+ +ME+  + P  + Y  +ID   +   M+ A  ++  M+ 
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+V TY  LI  LC  G   +AS+L + M E K+ P+   ++ +I  + KEG    
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L  EM ++ + P+I +YSS I   C   +  EA+ +   M+     P V  YN L +
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404

Query: 569 A 569
            
Sbjct: 405 G 405



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 15/308 (4%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           K  +++ EK+  NG+S               E K+ +   LF EM       +++ ++ L
Sbjct: 43  KTSYDYREKLSRNGLS---------------ELKLDDAVALFGEMVKSRPFPSIIEFSKL 87

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  + K  +      L +QM+  GI  N  TY+ LI+ FC   +   A  +  ++   G 
Sbjct: 88  LSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY 147

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P++VT + L+  +  +     A  LV +M   G  P+ VT+  LI      +   +A  
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M   G  PD+ TYGV+++GLC +G+   A  L N M + KLEP  ++YN +I G C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K  +   AL L  EM  KG+ PN+ +YSS I  LC  G+W +A  LL+ M++  + P V 
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 562 LYNILYRA 569
            ++ L  A
Sbjct: 328 TFSALIDA 335



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 1/155 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D   K+   ++A+  F  +  S + P   T+N ++  + K+   + GW  F    
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ DV ++  +I G C  G   +A  +  +++E G  PN   Y +LI    ++GD E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            +  L +++   G      T  ++   L    L K
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 244/452 (53%), Gaps = 1/452 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
            S+++ +  S+   +A+    QM  +G +P + TFN+L+  +       +          K
Sbjct: 770  SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 171  -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
              + D+ ++G+++ G C+ GD + AF +LN++E+    P V+IY ++IDG CK   ++ A
Sbjct: 830  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 230  KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
              LF+++   G+     TY+ LI  L   G   D       M    ++P ++T++ LI  
Sbjct: 890  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949

Query: 290  YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            +  EGK+ E  KL+DEM  R +  ++VTY++LI G C   R+ EA+++ + M      P+
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 350  VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            V+TYN LI GFC     ++   +F ++   G   + VTYN+LI+   +AG+  MA ++ +
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 410  EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            EM   G+ P+ +TY  L+D   ++  +EKA  ++  +Q+S   P +YTY ++I G+C  G
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129

Query: 470  NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
             +++   LF ++    ++P+ V YN MI G+C++G+   A  L  EM E G +PN   Y+
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 1189

Query: 530  STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            + I    +DG    +  L+ +M   G     S
Sbjct: 1190 TLIRARLRDGDREASAELIKEMRSCGFAGDAS 1221



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 247/463 (53%), Gaps = 9/463 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           +S+ V+   L E +    L+    + A+  F  M+ S   P    FN LL  ++K   +D
Sbjct: 146 ASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD 205

Query: 159 KGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              +  S  + K+E+     D+Y+F I+I   C    ++ A  +L ++ ++G+ P+ V  
Sbjct: 206 ---VVISLGK-KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 261

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            SL++G C+   +  A  L  K+ E+G       Y  +I  L K     D F+F+++++ 
Sbjct: 262 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 321

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P++ TY  L++  CN  + S+  +L  +M  +++  NV+TY+ L+    K  +V E
Sbjct: 322 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A+ L ++M    I P+++TY+ LI+G C     D+A ++F+ + S G    VV+YN LI 
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F KA   +    L REM +RG+  + VTY  LI  F ++ D++KA E +S M   G SP
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D++TY +L+ GLC  G +++A  +F  M + +++ + V Y  +I G CK G    A  L 
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             ++ KGL P+I +Y++ +  LC  G   E E L  +M + GL
Sbjct: 562 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 223/445 (50%), Gaps = 1/445 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
            D A+  F +M+ S   P    F+ LL  + K   FD       +     +  + Y++ IL
Sbjct: 677  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 736

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I   C    L  A  VL ++ ++G+ PN+V  +SL++G C +  I  A  L  ++   G 
Sbjct: 737  INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796

Query: 242  VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 T+  LI GLF +    +     ++M   G  P L TY  +++  C  G     F 
Sbjct: 797  QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856

Query: 302  LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            L ++M   ++   V+ YNT+I GLCK   + +A  L  +M+  GI PNV+TY+ LI   C
Sbjct: 857  LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916

Query: 362  DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            + G    A RL + +     +P V T++ LI AF K G    A  L  EM +R I PS V
Sbjct: 917  NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 976

Query: 422  TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            TY+ LI+ F   D +++A +M+  M      PDV TY  LI G C    ++E  ++F  M
Sbjct: 977  TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             +  L  N V YN++I G  + G+   A  +  EM   G+ PNI +Y++ +  LC++GK 
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 1096

Query: 542  PEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A V+   + +  ++P++  YNI+
Sbjct: 1097 EKAMVVFEYLQRSKMEPTIYTYNIM 1121



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 233/467 (49%), Gaps = 19/467 (4%)

Query: 103 VTKSRLYESIID------AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           + KSR + SI+D      A +K +  D  +    +M   G+R    TFN  ++     C 
Sbjct: 179 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN--IVINCFCCC 236

Query: 157 FDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           F       +     +   E D  + G L+ G C    ++ A  +++++ E+G+ P++V Y
Sbjct: 237 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 296

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            ++ID  CK   +  A   F++I   G+     TYT L+ GL  +    D       M  
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P++ TY+ L+  +   GKV E  +LF+EM    +  ++VTY++LI GLC   R+ E
Sbjct: 357 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A ++ D M   G   +V++YN LI+GFC A   +   +LF ++   G   + VTYN LI+
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 476

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F +AG+   A +   +M+  GI+P   TY IL+     + ++EKA  ++  MQK     
Sbjct: 477 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY  +I G+C  G ++EA  LF S+    L+P+ V Y  M+ G C +G  +    L 
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            +M ++GL+ N  + S        DG    +  L+ +ML  G  PS+
Sbjct: 597 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSL 635



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 53/514 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+   K++  +  +  F +M   G+   + T+N+L+    ++   DK   FFS+ +
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D++++ IL+ G C+ G+L KA  +   +++     ++V YT++I G CK G +E
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV----------- 276
            A  LF  +   GL     TYT ++ GL   GL  +    Y KM+  G+           
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 615

Query: 277 ----------------SPSL------------------------YTYN-CLIHEYCNEGK 295
                           +PSL                        Y Y   L     +E K
Sbjct: 616 ITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELK 675

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF EM       +++ ++ L+  + K  +      L +QM+  GI  N  TY+ 
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+ FC   +   A  +  ++   G  P++VT + L+  +  +     A  LV +M   G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+  LI      +   +A  +   M   G  PD+ TYGV+++GLC +G+   A 
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L N M + KLEP  ++YN +I G CK  +   AL L  EM  KG+ PN+ +YSS I  L
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C  G+W +A  LL+ M++  + P V  ++ L  A
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 7/362 (1%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
            +Y +IID   K +  D AL  F +M   G+RP   T++SL+  +   C++    D   L 
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL---CNYGRWSDASRLL 928

Query: 164  FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  K+  DV++F  LI    + G L +A ++ +++ +    P++V Y+SLI+G C +
Sbjct: 929  SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 988

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              ++ AK +F  +          TY  LI G  K    ++G E + +M   G+  +  TY
Sbjct: 989  DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
            N LI      G      ++F EM    V  N++TYNTL+ GLCK  ++++A  + + ++ 
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            + + P + TYN +I+G C AG+ +  + LF  L   G  P VV YN +I  F + G+ + 
Sbjct: 1109 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 1168

Query: 404  ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            A  L +EM+E G  P+   Y  LI + +R  D E + E+   M+  GF+ D  T G++ +
Sbjct: 1169 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228

Query: 464  GL 465
             L
Sbjct: 1229 ML 1230



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           LN A ++ + + +    P++V +  L+    K    +    L +K+  LG+    +T+ +
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +I   C  F+  L         KM   G  P   T   L++ +C   +VS+   L D+M 
Sbjct: 229 VINCFCCCFQVSL---ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 ++V YN +I  LCK  RV +A     +++  GI PNV+TY  L++G C++    
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RL + +     +P+V+TY+ L+ AF K G    A +L  EM    I P  VTY+ LI
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +     D +++A +M+ LM   G   DV +Y  LI+G C    +++  KLF  M +  L 
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN +I G+ + G+  +A     +M+  G+ P+I +Y+  +G LC +G+  +A V+
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
              M K  +   +  Y  + R 
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRG 547



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 157/301 (52%)

Query: 269  EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            E+MQ  G+  + YTY+ LI+ +C   ++     +  +M       N+VT ++L+ G C  
Sbjct: 719  EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778

Query: 329  MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             R+ EA  L+DQM + G  PN +T+N LI G     +  +A  L +++ + G  P +VTY
Sbjct: 779  KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 838

Query: 389  NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             V++    K G++ +A +L+ +ME+  + P  + Y  +ID   +   M+ A  ++  M+ 
Sbjct: 839  GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 898

Query: 449  SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
             G  P+V TY  LI  LC  G   +AS+L + M E K+ P+   ++ +I  + KEG    
Sbjct: 899  KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 958

Query: 509  ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            A +L  EM ++ + P+I +YSS I   C   +  EA+ +   M+     P V  YN L +
Sbjct: 959  AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 1018

Query: 569  A 569
             
Sbjct: 1019 G 1019



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+++   LF +M       ++V +N L+  + K  +      L  +M++ GI  ++ T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I+ FC   +   A  +  ++   G  P  VT   L+  F +      A  LV +M E 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  V Y  +IDS  ++  +  AF+ +  +++ G  P+V TY  L++GLC      +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L + M + K+ PN + Y+ ++  + K G    A  L  EM    + P+I +YSS I  
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC   +  EA  + + M+  G    V  YN L
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 439



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 116/240 (48%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +++++ +A  L   M  +   P+++ +N+L+       + D    L  +++  G    + 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N++I  F       +A  ++ +M + G  P  VT   L++ F R + +  A  +   M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G+ PD+  Y  +I  LC    + +A   F  +    + PN V Y  ++ G C     
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A RLL +M +K + PN+ +YS+ +    ++GK  EA+ L  +M+++ + P +  Y+ L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 1/155 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++D   K+   ++A+  F  +  S + P   T+N ++  + K+   + GW  F    
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 1142

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K V+ DV ++  +I G C  G   +A  +  +++E G  PN   Y +LI    ++GD E
Sbjct: 1143 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 1202

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             +  L +++   G      T  ++   L    L K
Sbjct: 1203 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 1237


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 167/506 (33%), Positives = 259/506 (51%), Gaps = 21/506 (4%)

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
           S + AAA  L   ++S      + +P ++L HL    PSS        L   ++ A    
Sbjct: 14  SPTSAAALALFKSVLSA---DKALSPLAVLPHLDGA-PSS--------LPNLLLTASAAV 61

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
           R    +L  + +M    +   + + + LL  +  + +F    LF    R ++ L   +F 
Sbjct: 62  RPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAF---ALFADMFRLRLPLCTTTFN 118

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           I+++  C AG   +A E+L Q+      PN V Y ++I G C  G ++ A  + R++ E 
Sbjct: 119 IMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRER 174

Query: 240 GLVA-TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVS 297
           G +A  Q+TY  +I G  K G   +  + +++M   G V P    YN LI  YC++GK+ 
Sbjct: 175 GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 234

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
                 D M  R VA  V TYN L+  L  + R  EA  L+++M   G++P+V TYN LI
Sbjct: 235 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           +G C  G   KA  +F  +   G   +VVTY  LI A SK G  +    L  E   RGI 
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 354

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  V Y  LI+S   S ++++AFE+   M+K   +PD  TY  L+ GLC+ G + EA KL
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            + M E  ++P+ V YN +I GY  +G+   ALR+  EM  KG  P + +Y++ I  LC+
Sbjct: 415 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +G+  +AE ++ +M++ G+ P  S Y
Sbjct: 475 NGQGDDAENMVKEMVENGITPDDSTY 500



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  + Y++G +
Sbjct: 132 RALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 187

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +++A +V +++   G   P  V+Y +LI G C  G ++ A +   ++ E G
Sbjct: 188 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 247

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +G   + +E  E+M   G++P ++TYN LI+ +C EG V +  
Sbjct: 248 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 307

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+ M  R V   VVTY  LI  L K+ +VQE ++L D+    GI P+++ YN LI+  
Sbjct: 308 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 367

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  D+AF +  +++    +P  VTYN L+R     G    A  L+ EM ERGI P  
Sbjct: 368 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 427

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI  +    D++ A  + + M   GF+P + TY  LI GLC  G   +A  +   
Sbjct: 428 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 487

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M E  + P+D  Y  +I G   E
Sbjct: 488 MVENGITPDDSTYISLIEGLTTE 510



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 25/444 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LP   AF+LF    R  L     + +I+LR L            L +M  
Sbjct: 83  TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 142

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    S GR+ ++      ++  + +    + N  T    Y ++I    K 
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAA----LDIMREMRERGGIAPNQYT----YGTVISGWCKV 194

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              D+A+  F +ML  G V+P +  +N+L+         D   L+      + V + V +
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +L+      G   +A+E++ ++   G +P+V  Y  LI+G CK G++++A  +F  + 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L K G  ++  + +++    G+ P L  YN LI+ +   G + 
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +A + VTYNTL+ GLC   RV EA +L+D+M   GI P+++TYN LI
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A R+ N++ + G +P+++TYN LI+   K G    A ++V+EM E GIT
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494

Query: 418 PSEVTYTILIDSFVRSDDMEKAFE 441
           P + TY  LI+     D  E+A +
Sbjct: 495 PDDSTYISLIEGLTTED--ERAID 516



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 44/333 (13%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N ++   C+ GK +   +L  +M       N VTYNT+I G C   RVQ A  ++ +M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 342 K-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAG 399
           +   GI+PN  TY  +I G+C  G  D+A ++F+++ + G+  P  V YN LI  +   G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A      M ERG+  +  TY +L+ +        +A+E+   M   G +PDV+TY 
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 460 VLIHGLCMKGNMK-----------------------------------EASKLFNSMWET 484
           +LI+G C +GN+K                                   E  KLF+     
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+ V+YN +I  +   GN  RA  ++GEM +K + P+  +Y++ +  LC  G+  EA
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 545 EVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             L+++M + G++P +  YN L   Y  K +++
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 168/538 (31%), Positives = 275/538 (51%), Gaps = 30/538 (5%)

Query: 32  FNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           F W  ++ G  H  +    +L LL       ++A     I  ++     ++ ++  ++  
Sbjct: 94  FKWTQKEFGAIHNVEQFCRLLHLL-------ANAKNYNKIRALLDSFAKNAHYSNSTIFH 146

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
            L+ L    S     S + + ++ A++K+   D AL  F +  D G R  + + N +L+ 
Sbjct: 147 SLSVL---GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 151 VIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           ++K          + E  R ++ ++V +F ++I G C+ G   KA +V+  ++  GFSP+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           V+ Y ++IDG CK G + +A  L +++    +   + T+ +LI G  ++       + +E
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +MQ  G+ P++ TYN LI+  C+ GK+ E   L D+M    +  NVVTYN LI G CK+ 
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            ++EA  +LD +   G++PNVIT+N LID +  AG  D AF L + +   G  P+V TYN
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI  F + GN K A  L +EME  G+    VTY IL+D+  +  +  KA  +   M + 
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV 503

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G +P   TY  LI G   +GN   A  +   M +     N V YN++I G+C +G    A
Sbjct: 504 GLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 563

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS--LYNI 565
            RLL EM EKGL+PN  +Y                ++L ++M++ G  P +   LYN+
Sbjct: 564 NRLLNEMLEKGLIPNRTTY----------------DILRDEMMEKGFIPDIDGHLYNV 605



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 223/422 (52%), Gaps = 35/422 (8%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+    + G+++ A E  ++  + GF  + +    ++    K G I   + +++++   
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +     T+ V+I GL K G  +   +  E M+  G SPS+ TYN +I  YC  GK+ + 
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM  + +  N +T+N LI G C++  V  A+++ ++M+  G+ PNV+TYN LI+G
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G+ D+A  L +++   G  P+VVTYN LI  F K    K A +++ ++ +RG+ P+
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK--- 476
            +T+  LID++ ++  M+ AF + S+M  +G  P+V TY  LI G C +GN+KEA K   
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 477 --------------------------------LFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                                           L + M+E  L P+ + YN +I GY +EG
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           NS  AL +   M +KG   NI +Y+  I   C  GK  EA  LLN+ML+ GL P+ + Y+
Sbjct: 524 NSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583

Query: 565 IL 566
           IL
Sbjct: 584 IL 585



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 184/357 (51%), Gaps = 3/357 (0%)

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV--LICGLFKNGLQKDGFEFYEKMQ 272
           +L+D   KN     +  +F  +  LG     ++  V  L+    KNG      E +++  
Sbjct: 128 ALLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAG 186

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G   S  + N ++     EG++     ++ EM  R +  NVVT++ +I GLCK  + Q
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  +++ MK  G SP+VITYN +IDG+C AG+  KA  L  ++ +    P+ +T+N+LI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F +  N   A  +  EM+ +G+ P+ VTY  LI+    +  +++A  +   M   G  
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY  LI+G C K  +KEA ++ + + +  L PN + +N +I  Y K G    A  L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              M + G+ PN+++Y+  I   C++G   EA  L  +M   GLK  +  YNIL  A
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/444 (35%), Positives = 242/444 (54%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           ++ +I  +++++     +   + M D G+ P   T ++LL  + +   F +   LF +  
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ D Y + +++K  CE  D NKA E++NQ E  G S ++V Y   I+G CK+  + 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  + R +GE GL A   TY  L+ GL +    + G E  ++M   G  PS    + LI
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G +   F+L +++    V  N+  YN++I  LCK  +++EAE L   M   G++
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY  LIDGF    + D AF  FN++   G S +V +YN +I    K G  KMA  L
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM ++G+ P+  TYT LI  + +   + KAF++Y  M   G +P+  T+  LI GLC 
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M EASKLF+ M E K+ PN+V YN++I G+C+EGN+ RA  LL EM +KGL P+  +
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y   I  LC  G+  EA+  +N +
Sbjct: 578 YRPLIAGLCSTGRVSEAKEFINDL 601



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 235/458 (51%), Gaps = 3/458 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+I++  K+   ++A   F  M + G+ P   T+  L+    +    D  + +F++ 
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C +   VYS+  +I   C+ G +  A  +  ++ + G  P V  YTSLI G CK+G +
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  L+ ++   G+     T+T LICGL +     +  + +++M    + P+  TYN L
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C EG  +  F+L DEM  + ++ +  TY  LI GLC   RV EA+  ++ +     
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             + + Y  L+ GFC  G   +A     ++   G    +V+Y VLI   +   N ++  +
Sbjct: 607 RLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFE 665

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+REM  +G+ P  V YTILID F++S +++KAFE + +M   G+ P+  TY  L++GL 
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + EA  LF  M   +  PN + Y   +    KEGN   AL+L   M  +G   N  
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTV 784

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +Y+  I   CQ GK+ EA  LL+ M+ +G+ P    Y+
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYS 822



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 239/505 (47%), Gaps = 73/505 (14%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAGDLNK 193
           GV P    +NS++  + K+   ++  L FS    R     DV ++ ILI G      L+ 
Sbjct: 360 GVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDV-TYTILIDGFGRRAKLDV 418

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AF   N++ E G S  V  Y S+I+  CK G ++ A++LF+++ + GL  T  TYT LI 
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  K+GL    F+ Y +M   G++P+  T+  LI   C   K++E  KLFDEM   ++  
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VTYN LI G C+E     A  LLD+M   G+SP+  TY  LI G C  G   +A    
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAG---------------------------------- 399
           N L    Q    + Y  L++ F K G                                  
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ 658

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
           N ++  +L+REM  +G+ P  V YTILID F++S +++KAFE + +M   G+ P+  TY 
Sbjct: 659 NDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYT 718

Query: 460 VLIHGL-----------------------------CM------KGNMKEASKLFNSMWET 484
            L++GL                             C       +GNM+ A +L N+M + 
Sbjct: 719 ALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQG 778

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
               N V YN++I GYC+ G    A +LL  M   G+VP+  +YS+ I   C+ G    A
Sbjct: 779 SF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAA 837

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             +   ML+ GLKP   ++N L  A
Sbjct: 838 MDMWECMLQRGLKPDRVVFNFLIHA 862



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 241/493 (48%), Gaps = 36/493 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   +    D A +YF++M++ G+     ++NS++    K        L F E  
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV 462

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++  V ++  LI G C+ G + KAF++ +++   G +PN V +T+LI G C+   + 
Sbjct: 463 DKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMA 522

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ EL ++  + TY VLI G  + G     FE  ++M   G+SP  YTY  LI
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLI 582

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA------------- 334
              C+ G+VSE  +  +++ H+    + + Y  L+ G CKE R++EA             
Sbjct: 583 AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQ 642

Query: 335 -----------------ER----LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
                            +R    LL +M   G+ P+ + Y  LIDGF  +G   KAF  +
Sbjct: 643 MDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFW 702

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G  P+ VTY  L+    KAG    A  L + M      P+ +TY   +D   + 
Sbjct: 703 YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKE 762

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +ME A ++++ M +  F+  V TY +LI G C  G  +EA+KL + M    + P+ + Y
Sbjct: 763 GNMENALQLHNAMLQGSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITY 821

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           +  I+ YCK GN   A+ +   M ++GL P+   ++  I   C +G+   A  L N M+ 
Sbjct: 822 STFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMML 881

Query: 554 LGLKPSVSLYNIL 566
            GLKP+ S Y+ L
Sbjct: 882 RGLKPTQSTYHSL 894



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 240/499 (48%), Gaps = 43/499 (8%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R   ++++A  + R   Q L  F  ++++GV+P    +  ++  + +   F+K     ++
Sbjct: 191 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ 250

Query: 167 ---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              N C   L + ++ + I G C++  + +A EV   L E G   ++V Y +L+ G C+ 
Sbjct: 251 AEGNGC--SLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRI 308

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            + E    +  ++ ELG V ++   + LI GL K G  +  FE   K+   GV P+L+ Y
Sbjct: 309 QEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI--------------------- 322
           N +I+  C  GK+ E   LF  M  R +  N VTY  LI                     
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428

Query: 323 CGL--------------CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           CG+              CK  +++ AE L  +M   G+ P V TY  LI G+C  G   K
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF+L++++   G +P+ VT+  LI    +      AS L  EM E  I P+EVTY +LI+
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R  +  +AFE+   M K G SPD YTY  LI GLC  G + EA +  N +       
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAEVL 547
           +++ Y  ++ G+CKEG    AL    EM  +GL  ++ SY+  I G L Q+ +      L
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE--L 666

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L +M   G++P   +Y IL
Sbjct: 667 LREMHGKGMQPDNVIYTIL 685



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 35/389 (8%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           +  LI    +N  +    ++   + + GL+    T + L+  L +    +   E ++ + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             GV P  Y Y  ++   C     ++  ++ ++      + ++VTYN  I GLCK  RV 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFC------------------------------- 361
           EA  +   +   G+  +++TY  L+ G C                               
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 362 ----DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
                 G  + AF L N++   G  P++  YN +I +  K G  + A  L   M ERG+ 
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P++VTYTILID F R   ++ AF  ++ M + G S  VY+Y  +I+  C  G MK A  L
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M +  L+P    Y  +I GYCK+G   +A +L  EM  KG+ PN  ++++ I  LCQ
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             K  EA  L ++M++L + P+   YN+L
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVL 546



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 4/258 (1%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA- 229
           +++D+ S+ +LI G     D    FE+L ++   G  P+ VIYT LIDG  K+G++++A 
Sbjct: 641 LQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAF 699

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           +  +  IGE G V    TYT L+ GLFK G   +    +++M +    P+  TY C +  
Sbjct: 700 EFWYIMIGE-GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDH 758

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
              EG +    +L + M     A N VTYN LI G C+  + QEA +LLD M   G+ P+
Sbjct: 759 LTKEGNMENALQLHNAMLQGSFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            ITY+  I  +C  G  D A  ++  +   G  P  V +N LI A    G    A  L  
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRN 877

Query: 410 EMEERGITPSEVTYTILI 427
           +M  RG+ P++ TY  L+
Sbjct: 878 DMMLRGLKPTQSTYHSLM 895


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/535 (32%), Positives = 270/535 (50%), Gaps = 26/535 (4%)

Query: 36  SRQGLQHTPQ-----SISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           SR+ L  +PQ       S    +  +  +S + AAA  L   ++S      + +P ++L 
Sbjct: 359 SRKTLLRSPQFHMAPPTSAAAAVAAAARASPTSAAALALFKSVLSA---DKALSPLAVLP 415

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           HL    PSS        L   ++ A    R    +L  + +M    +   + + + LL  
Sbjct: 416 HLDGA-PSS--------LPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSA 466

Query: 151 VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           +  + +F    LF    R ++ L   +F I+++  C AG   +A E+L Q+      PN 
Sbjct: 467 LPSAPAFA---LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNA 519

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA-TQHTYTVLICGLFKNGLQKDGFEFYE 269
           V Y ++I G C  G ++ A  + R++ E G +A  Q+TY  +I G  K G   +  + ++
Sbjct: 520 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 579

Query: 270 KMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +M   G V P    YN LI  YC++GK+       D M  R VA  V TYN L+  L  +
Sbjct: 580 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 639

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R  EA  L+++M   G++P+V TYN LI+G C  G   KA  +F  +   G   +VVTY
Sbjct: 640 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 699

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             LI A SK G  +    L  E   RGI P  V Y  LI+S   S ++++AFE+   M+K
Sbjct: 700 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 759

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              +PD  TY  L+ GLC+ G + EA KL + M E  ++P+ V YN +I GY  +G+   
Sbjct: 760 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 819

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           ALR+  EM  KG  P + +Y++ I  LC++G+  +AE ++ +M++ G+ P  S Y
Sbjct: 820 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  + Y++G +
Sbjct: 506 RALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 561

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +++A +V +++   G   P  V+Y +LI G C  G ++ A +   ++ E G
Sbjct: 562 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 621

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +G   + +E  E+M   G++P ++TYN LI+ +C EG V +  
Sbjct: 622 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 681

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+ M  R V   VVTY  LI  L K+ +VQE ++L D+    GI P+++ YN LI+  
Sbjct: 682 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 741

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  D+AF +  +++    +P  VTYN L+R     G    A  L+ EM ERGI P  
Sbjct: 742 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 801

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI  +    D++ A  + + M   GF+P + TY  LI GLC  G   +A  +   
Sbjct: 802 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M E  + P+D  Y  +I G   E
Sbjct: 862 MVENGITPDDSTYISLIEGLTTE 884



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 23/438 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LP   AF+LF    R  L     + +I+LR L            L +M  
Sbjct: 457 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 516

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    S GR+ ++      ++  + +    + N  T    Y ++I    K 
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAA----LDIMREMRERGGIAPNQYT----YGTVISGWCKV 568

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              D+A+  F +ML  G V+P +  +N+L+         D   L+      + V + V +
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +L+      G   +A+E++ ++   G +P+V  Y  LI+G CK G++++A  +F  + 
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L K G  ++  + +++    G+ P L  YN LI+ +   G + 
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 748

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +A + VTYNTL+ GLC   RV EA +L+D+M   GI P+++TYN LI
Sbjct: 749 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 808

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A R+ N++ + G +P+++TYN LI+   K G    A ++V+EM E GIT
Sbjct: 809 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868

Query: 418 PSEVTYTILIDSFVRSDD 435
           P + TY  LI+     D+
Sbjct: 869 PDDSTYISLIEGLTTEDE 886



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 44/333 (13%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N ++   C+ GK +   +L  +M       N VTYNT+I G C   RVQ A  ++ +M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 342 K-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAG 399
           +   GI+PN  TY  +I G+C  G  D+A ++F+++ + G+  P  V YN LI  +   G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A      M ERG+  +  TY +L+ +        +A+E+   M   G +PDV+TY 
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 460 VLIHGLCMKGNMK-----------------------------------EASKLFNSMWET 484
           +LI+G C +GN+K                                   E  KLF+     
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+ V+YN +I  +   GN  RA  ++GEM +K + P+  +Y++ +  LC  G+  EA
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 545 EVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             L+++M + G++P +  YN L   Y  K +++
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 241/471 (51%), Gaps = 36/471 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           +H+ML  GV+P    +N+++  + K  +  D   +       ++  D +++  +I G C 
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             DL+ A +V NQ+ + G  PN V Y++LI+G C +G +  A  L R++   G++ T HT
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            T  I  L   G  +D +  +  M+  G  P++YTY  LI   C  G +     LF  M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N VTYN LI  L +  R++ A  +L+ M   G SPN++TYN++I G+C  G+  
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------------------------- 400
           KA  + N +   G S ++VTYN +I+ +  +GN                           
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 401 ------SKMAS--DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                 SKM S   L  EM + G+ P+EVTYT LID + + + ++ A  +   M++SG  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY VLIHGL  + N   A +L   M E  + PN V Y  MI G CK G++  AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             +M E+G +PN+ +YSS I  L Q+GK  EAE L  ++ + GL P    Y
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 234/490 (47%), Gaps = 19/490 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++F S  +P T +  Y S+I  H +    D AL  F+QM   G  P + T+++L+  +
Sbjct: 238 MKKVFESEMSPDTFT--YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295

Query: 152 IKSCSFDKGWLFFSENRCKVELDVYSFGIL---------IKGCCEAGDLNKAFEVLNQLE 202
             S   ++ +    E        +   GIL         I   C+ G    A+ +   ++
Sbjct: 296 CDSGRVNEAFDLIRE--------MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  PNV  YT+LI G C +G ++ A  LF ++   G+     TY  LI  L +N   K
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             F     M  NG SP++ TYN +I  YC  G   +   + + M  R  + N+VTYNT+I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C       A R+LD M+  G  P+  +Y +LI GFC   + + AF LFN++  +G  
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+ VTY  LI  + K      A+ L+  M+  G  P+  TY +LI    + ++   A E+
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             +M + G  P+V TY  +I GLC  G+   A ++FN M E    PN + Y+ +I    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  L  E+   GL+P+  +Y   I      GK   A   L +M+K G +P++  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 563 YNILYRAKNN 572
           Y +L +   N
Sbjct: 708 YGVLIKGLKN 717



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 231/462 (50%), Gaps = 18/462 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++I     S L   A+  FH+M   GV P + T+N+L+  ++++      ++  +   
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C    ++ ++  +IKG C  GD  KA  V+N + + G S N+V Y ++I G C +G+
Sbjct: 418 RNGCSP--NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  +   + + G    + +YT LICG  K    +  F  + +M  +G+ P+  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC + K+     L + M+      NV TYN LI GL K+     AE L   M   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I PNV+TY  +IDG C  G T  A  +FN++   G  P+++TY+ LIRA  + G  + A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L  E+E  G+ P E+TY  +I++++ S  +E AF     M K+G  P ++TYGVLI GL
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-GEMNEKGLVPN 524
             K     A +   ++        DVV N   FGY  +     A+ ++  ++ E     +
Sbjct: 716 --KNEYLLADQRLAAL-------PDVVPNCS-FGY--QTTDQDAVSVMSAKLAELDPGLS 763

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   ++ +  L   G+W EA  LL  M+  GL P    YN L
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 192/459 (41%), Gaps = 35/459 (7%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N VT    Y +II  +  S  +  AL     M D G +P   ++  L+    K    +
Sbjct: 457 SANLVT----YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 159 KGWLFFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
             +  F+E      C  E+   ++  LI G C+   L+ A  +L  ++  G  PNV  Y 
Sbjct: 513 SAFGLFNEMVDDGLCPNEV---TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LI G  K  +   A+ L + + E G+     TYT +I GL KNG      E + KM   
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+L TY+ LI     EGKV E   LF E+    +  + +TY  +I       +V+ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGF--------------------CDAG----ETDKAF 370
              L +M  AG  P + TY  LI G                     C  G    + D   
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  +L       SV   N L+   S AG    A++L+  M  +G+ P +  Y  L+ S 
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +R  +++ A  ++  M   G    +  Y  LI  LC     KEA   F +M      P+D
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           VV  ++I G  ++G     +  L  M  +  +P+   Y+
Sbjct: 870 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 147/383 (38%), Gaps = 70/383 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K    D A      M  SG RP   T+N L+  + K  +F       +E  
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG-----AEEL 587

Query: 169 CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           CKV ++      V ++  +I G C+ G  + A E+ N++ E G  PN++ Y+SLI    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 223 NGDIERAKMLFRKIGELGLVA-----------------------------------TQHT 247
            G +E A+ LF ++   GL+                                    T  T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 248 YTVLICGLFKNGLQKD---------------GFEFYEK-------MQLNGVSP--SLYTY 283
           Y VLI GL    L  D               G++  ++        +L  + P  S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+      G+  E  +L   M  + +  +   YN+L+C L +   V  A  +   M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   ++  Y +LI   C      +A   F  +     +P  V   VLI    + G   +
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 404 ASDLVREMEERGITPSEVTYTIL 426
             + +  ME R   PS   YTIL
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTIL 910



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 35/353 (9%)

Query: 73  IISGRITSSSFTPRSLLCHLT---QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           +I G    ++F+    LC +     +FP   N VT    Y ++ID   K+  +  AL  F
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFP---NVVT----YTAMIDGLCKNGSTSLALEMF 623

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
           ++M++ G  P   T++SL+  + +    ++    F+E  R  +  D  ++  +I+    +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC--------------------CKNG---- 224
           G +  AF  L ++ + G  P +  Y  LI G                     C  G    
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 743

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D +   ++  K+ EL    +      L+  L   G   +  E    M   G+ P    YN
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+        V     +F  M  +    ++  Y  LIC LC+  R +EA    + M M 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +P+ +    LIDG    G  D      + +++    PS   Y +L R  SK
Sbjct: 864 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 241/471 (51%), Gaps = 36/471 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           +H+ML  GV+P    +N+++  + K  +  D   +       ++  D +++  +I G C 
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             DL+ A +V NQ+ + G  PN V Y++LI+G C +G +  A  L R++   G++ T HT
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            T  I  L   G  +D +  +  M+  G  P++YTY  LI   C  G +     LF  M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N VTYN LI  L +  R++ A  +L+ M   G SPN++TYN++I G+C  G+  
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------------------------- 400
           KA  + N +   G S ++VTYN +I+ +  +GN                           
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 401 ------SKMAS--DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                 SKM S   L  EM + G+ P+EVTYT LID + + + ++ A  +   M++SG  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY VLIHGL  + N   A +L   M E  + PN V Y  MI G CK G++  AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             +M E+G +PN+ +YSS I  L Q+GK  EAE L  ++ + GL P    Y
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 234/490 (47%), Gaps = 19/490 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++F S  +P T +  Y S+I  H +    D AL  F+QM   G  P + T+++L+  +
Sbjct: 238 MKKVFESEMSPDTFT--YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295

Query: 152 IKSCSFDKGWLFFSENRCKVELDVYSFGIL---------IKGCCEAGDLNKAFEVLNQLE 202
             S   ++ +    E        +   GIL         I   C+ G    A+ +   ++
Sbjct: 296 CDSGRVNEAFDLIRE--------MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  PNV  YT+LI G C +G ++ A  LF ++   G+     TY  LI  L +N   K
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             F     M  NG SP++ TYN +I  YC  G   +   + + M  R  + N+VTYNT+I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C       A R+LD M+  G  P+  +Y +LI GFC   + + AF LFN++  +G  
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+ VTY  LI  + K      A+ L+  M+  G  P+  TY +LI    + ++   A E+
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             +M + G  P+V TY  +I GLC  G+   A ++FN M E    PN + Y+ +I    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  L  E+   GL+P+  +Y   I      GK   A   L +M+K G +P++  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 563 YNILYRAKNN 572
           Y +L +   N
Sbjct: 708 YGVLIKGLKN 717



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 231/462 (50%), Gaps = 18/462 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++I     S +   A+  FH+M   GV P + T+N+L+  ++++      ++  +   
Sbjct: 358 YTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C    ++ ++  +IKG C  GD  KA  V+N + + G S N+V Y ++I G C +G+
Sbjct: 418 RNGCSP--NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  +   + + G    + +YT LICG  K    +  F  + +M  +G+ P+  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC + K+     L + M+      NV TYN LI GL K+     AE L   M   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I PNV+TY  +IDG C  G T  A  +FN++   G  P+++TY+ LIRA  + G  + A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L  E+E  G+ P E+TY  +I++++ S  +E AF     M K+G  P ++TYGVLI GL
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-GEMNEKGLVPN 524
             K     A +   ++        DVV N   FGY  +     A+ ++  ++ E     +
Sbjct: 716 --KNEYLLADQRLAAL-------PDVVPNCS-FGY--QTTDQDAVSVMSAKLAELDPGLS 763

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   ++ +  L   G+W EA  LL  M+  GL P    YN L
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 192/459 (41%), Gaps = 35/459 (7%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N VT    Y +II  +  S  +  AL     M D G +P   ++  L+    K    +
Sbjct: 457 SANLVT----YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 159 KGWLFFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
             +  F+E      C  E+   ++  LI G C+   L+ A  +L  ++  G  PNV  Y 
Sbjct: 513 SAFGLFNEMVDDGLCPNEV---TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LI G  K  +   A+ L + + E G+     TYT +I GL KNG      E + KM   
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+L TY+ LI     EGKV E   LF E+    +  + +TY  +I       +V+ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGF--------------------CDAG----ETDKAF 370
              L +M  AG  P + TY  LI G                     C  G    + D   
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  +L       SV   N L+   S AG    A++L+  M  +G+ P +  Y  L+ S 
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +R  +++ A  ++  M   G    +  Y  LI  LC     KEA   F +M      P+D
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           VV  ++I G  ++G     +  L  M  +  +P+   Y+
Sbjct: 870 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 147/383 (38%), Gaps = 70/383 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K    D A      M  SG RP   T+N L+  + K  +F       +E  
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG-----AEEL 587

Query: 169 CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           CKV ++      V ++  +I G C+ G  + A E+ N++ E G  PN++ Y+SLI    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 223 NGDIERAKMLFRKIGELGLVA-----------------------------------TQHT 247
            G +E A+ LF ++   GL+                                    T  T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 248 YTVLICGLFKNGLQKD---------------GFEFYEK-------MQLNGVSP--SLYTY 283
           Y VLI GL    L  D               G++  ++        +L  + P  S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+      G+  E  +L   M  + +  +   YN+L+C L +   V  A  +   M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   ++  Y +LI   C      +A   F  +     +P  V   VLI    + G   +
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 404 ASDLVREMEERGITPSEVTYTIL 426
             + +  ME R   PS   YTIL
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTIL 910



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 35/353 (9%)

Query: 73  IISGRITSSSFTPRSLLCHLT---QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           +I G    ++F+    LC +     +FP   N VT    Y ++ID   K+  +  AL  F
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFP---NVVT----YTAMIDGLCKNGSTSLALEMF 623

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
           ++M++ G  P   T++SL+  + +    ++    F+E  R  +  D  ++  +I+    +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC--------------------CKNG---- 224
           G +  AF  L ++ + G  P +  Y  LI G                     C  G    
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 743

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D +   ++  K+ EL    +      L+  L   G   +  E    M   G+ P    YN
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+        V     +F  M  +    ++  Y  LIC LC+  R +EA    + M M 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +P+ +    LIDG    G  D      + +++    PS   Y +L R  SK
Sbjct: 864 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 173/535 (32%), Positives = 270/535 (50%), Gaps = 26/535 (4%)

Query: 36  SRQGLQHTPQ-----SISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           SR+ L  +PQ       S    +  +  +S + AAA  L   ++S      + +P ++L 
Sbjct: 354 SRKTLLRSPQFHMAPPTSAAAAVAAAARASPTSAAALALFKSVLSA---DKALSPLAVLP 410

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           HL    PSS        L   ++ A    R    +L  + +M    +   + + + LL  
Sbjct: 411 HLDGA-PSS--------LPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSA 461

Query: 151 VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           +  + +F    LF    R ++ L   +F I+++  C AG   +A E+L Q+      PN 
Sbjct: 462 LPSAPAF---ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNA 514

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA-TQHTYTVLICGLFKNGLQKDGFEFYE 269
           V Y ++I G C  G ++ A  + R++ E G +A  Q+TY  +I G  K G   +  + ++
Sbjct: 515 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 574

Query: 270 KMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +M   G V P    YN LI  YC++GK+       D M  R VA  V TYN L+  L  +
Sbjct: 575 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 634

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R  EA  L+++M   G++P+V TYN LI+G C  G   KA  +F  +   G   +VVTY
Sbjct: 635 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 694

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             LI A SK G  +    L  E   RGI P  V Y  LI+S   S ++++AFE+   M+K
Sbjct: 695 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 754

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              +PD  TY  L+ GLC+ G + EA KL + M E  ++P+ V YN +I GY  +G+   
Sbjct: 755 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 814

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           ALR+  EM  KG  P + +Y++ I  LC++G+  +AE ++ +M++ G+ P  S Y
Sbjct: 815 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  + Y++G +
Sbjct: 501 RALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 556

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +++A +V +++   G   P  V+Y +LI G C  G ++ A +   ++ E G
Sbjct: 557 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 616

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +G   + +E  E+M   G++P ++TYN LI+ +C EG V +  
Sbjct: 617 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 676

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+ M  R V   VVTY  LI  L K+ +VQE ++L D+    GI P+++ YN LI+  
Sbjct: 677 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 736

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  D+AF +  +++    +P  VTYN L+R     G    A  L+ EM ERGI P  
Sbjct: 737 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 796

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI  +    D++ A  + + M   GF+P + TY  LI GLC  G   +A  +   
Sbjct: 797 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M E  + P+D  Y  +I G   E
Sbjct: 857 MVENGITPDDSTYISLIEGLTTE 879



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 23/438 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LP   AF+LF    R  L     + +I+LR L            L +M  
Sbjct: 452 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 511

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    S GR+ ++      ++  + +    + N  T    Y ++I    K 
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAA----LDIMREMRERGGIAPNQYT----YGTVISGWCKV 563

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              D+A+  F +ML  G V+P +  +N+L+         D   L+      + V + V +
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +L+      G   +A+E++ ++   G +P+V  Y  LI+G CK G++++A  +F  + 
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L K G  ++  + +++    G+ P L  YN LI+ +   G + 
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 743

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +A + VTYNTL+ GLC   RV EA +L+D+M   GI P+++TYN LI
Sbjct: 744 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A R+ N++ + G +P+++TYN LI+   K G    A ++V+EM E GIT
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863

Query: 418 PSEVTYTILIDSFVRSDD 435
           P + TY  LI+     D+
Sbjct: 864 PDDSTYISLIEGLTTEDE 881



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 44/333 (13%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N ++   C+ GK +   +L  +M       N VTYNT+I G C   RVQ A  ++ +M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 342 K-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAG 399
           +   GI+PN  TY  +I G+C  G  D+A ++F+++ + G+  P  V YN LI  +   G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A      M ERG+  +  TY +L+ +        +A+E+   M   G +PDV+TY 
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 460 VLIHGLCMKGNMK-----------------------------------EASKLFNSMWET 484
           +LI+G C +GN+K                                   E  KLF+     
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+ V+YN +I  +   GN  RA  ++GEM +K + P+  +Y++ +  LC  G+  EA
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 545 EVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             L+++M + G++P +  YN L   Y  K +++
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 243/484 (50%), Gaps = 37/484 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-------------------- 162
           D AL YF+ ML    RP    FN LL  ++K   +    +                    
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162

Query: 163 ----FFSENRCKV-------------ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
               FF   R  +             +L + +F  LI G C+ G   +A E+ + +   G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           + P+V  YT++I+G CK G+   A  LFRK+GE G      TY+ +I  L K+    +  
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           + +  M+  G+SP+++TYN LI   CN  +  E   + +EM    +  N+VT++ LI   
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CKE  V EA  +L  M   G+ PNV+TY+ L++G+    E  +A +LF+ + + G  P V
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            +YN+LI  + KA     A  L  EM  +G+TP  V+Y  LID   +   + +A +++  
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M  +G  PD+ TY +L+ G C +G + +A +LF +M  T L+PN V+YN++I   CK  N
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A +L  E+  +GL PN+  Y++ I  LC++G   EA      M + G  P+   YN+
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 566 LYRA 569
           + R 
Sbjct: 583 IIRG 586



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 227/420 (54%), Gaps = 1/420 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           + ++I+   K     QA+  F  M+  G +P  +T+ +++  + K   +     LF    
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG 254

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV ++  +I   C+   +N+A ++ + ++  G SPN+  Y SLI G C      
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++  L ++    T+++LI    K G   +     + M   GV P++ TY+ L+
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + Y  + +V E  KLFD M  +    +V +YN LI G CK  R+ EA++L ++M   G++
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++++YN LIDG C  G   +A  LF  + +NG  P + TY++L+  F K G    A  L
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M+   + P+ V Y ILID+  +S ++++A +++S +   G  P+V  Y  +I+GLC 
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G + EA + F +M E    PN+  YN++I G+ +  +  RA++L+GEM EKG V ++A+
Sbjct: 555 EGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 34/140 (24%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +IDA  KSR   +A   F ++   G++P                            
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQP---------------------------- 540

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +V  +  +I G C+ G L++A E    +EE G  PN   Y  +I G  ++ D  
Sbjct: 541 ------NVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDES 594

Query: 228 RAKMLFRKIGELGLVATQHT 247
           RA  L  ++ E G VA   T
Sbjct: 595 RAVQLIGEMREKGFVADVAT 614


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 241/471 (51%), Gaps = 36/471 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           +H+ML  GV+P    +N+++  + K  +  D   +       ++  D +++  +I G C 
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             DL+ A +V NQ+ + G  PN V Y++LI+G C +G +  A  L R++   G++ T HT
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            T  I  L   G  +D +  +  M+  G  P++YTY  LI   C  G +     LF  M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N VTYN LI  L +  R++ A  +L+ M   G SPN++TYN++I G+C  G+  
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------------------------- 400
           KA  + N +   G S ++VTYN +I+ +  +GN                           
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 401 ------SKMAS--DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                 SKM S   L  EM + G+ P+EVTYT LID + + + ++ A  +   M++SG  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY VLIHGL  + N   A +L   M E  + PN V Y  MI G CK G++  AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             +M E+G +PN+ +YSS I  L Q+GK  EAE L  ++ + GL P    Y
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 234/490 (47%), Gaps = 19/490 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++F S  +P T +  Y S+I  H +    D AL  F+QM   G  P + T+++L+  +
Sbjct: 238 MKKVFESEMSPDTFT--YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295

Query: 152 IKSCSFDKGWLFFSENRCKVELDVYSFGIL---------IKGCCEAGDLNKAFEVLNQLE 202
             S   ++ +    E        +   GIL         I   C+ G    A+ +   ++
Sbjct: 296 CDSGRVNEAFDLIRE--------MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  PNV  YT+LI G C +G ++ A  LF ++   G+     TY  LI  L +N   K
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             F     M  NG SP++ TYN +I  YC  G   +   + + M  R  + N+VTYNT+I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C       A R+LD M+  G  P+  +Y +LI GFC   + + AF LFN++  +G  
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+ VTY  LI  + K      A+ L+  M+  G  P+  TY +LI    + ++   A E+
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             +M + G  P+V TY  +I GLC  G+   A ++FN M E    PN + Y+ +I    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  L  E+   GL+P+  +Y   I      GK   A   L +M+K G +P++  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 563 YNILYRAKNN 572
           Y +L +   N
Sbjct: 708 YGVLIKGLKN 717



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 231/462 (50%), Gaps = 18/462 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++I     S L   A+  FH+M   GV P + T+N+L+  ++++      ++  +   
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C    ++ ++  +IKG C  GD  KA  V+N + + G S N+V Y ++I G C +G+
Sbjct: 418 RNGCSP--NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  +   + + G    + +YT LICG  K    +  F  + +M  +G+ P+  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC + K+     L + M+      NV TYN LI GL K+     AE L   M   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I PNV+TY  +IDG C  G T  A  +FN++   G  P+++TY+ LIRA  + G  + A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L  E+E  G+ P E+TY  +I++++ S  +E AF     M K+G  P ++TYGVLI GL
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-GEMNEKGLVPN 524
             K     A +   ++        DVV N   FGY  +     A+ ++  ++ E     +
Sbjct: 716 --KNEYLLADQRLAAL-------PDVVPNCS-FGY--QTTDQDAVSVMSAKLAELDPGLS 763

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   ++ +  L   G+W EA  LL  M+  GL P    YN L
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 192/459 (41%), Gaps = 35/459 (7%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N VT    Y +II  +  S  +  AL     M D G +P   ++  L+    K    +
Sbjct: 457 SANLVT----YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 159 KGWLFFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
             +  F+E      C  E+   ++  LI G C+   L+ A  +L  ++  G  PNV  Y 
Sbjct: 513 SAFGLFNEMVDDGLCPNEV---TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LI G  K  +   A+ L + + E G+     TYT +I GL KNG      E + KM   
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+L TY+ LI     EGKV E   LF E+    +  + +TY  +I       +V+ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGF--------------------CDAG----ETDKAF 370
              L +M  AG  P + TY  LI G                     C  G    + D   
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  +L       SV   N L+   S AG    A++L+  M  +G+ P +  Y  L+ S 
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +R  +++ A  ++  M   G    +  Y  LI  LC     KEA   F +M      P+D
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           VV  ++I G  ++G     +  L  M  +  +P+   Y+
Sbjct: 870 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 147/383 (38%), Gaps = 70/383 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K    D A      M  SG RP   T+N L+  + K  +F       +E  
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG-----AEEL 587

Query: 169 CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           CKV ++      V ++  +I G C+ G  + A E+ N++ E G  PN++ Y+SLI    +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 223 NGDIERAKMLFRKIGELGLVA-----------------------------------TQHT 247
            G +E A+ LF ++   GL+                                    T  T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 248 YTVLICGLFKNGLQKD---------------GFEFYEK-------MQLNGVSP--SLYTY 283
           Y VLI GL    L  D               G++  ++        +L  + P  S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+      G+  E  +L   M  + +  +   YN+L+C L +   V  A  +   M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   ++  Y +LI   C      +A   F  +     +P  V   VLI    + G   +
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 404 ASDLVREMEERGITPSEVTYTIL 426
             + +  ME R   PS   YTIL
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTIL 910



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 146/369 (39%), Gaps = 35/369 (9%)

Query: 73  IISGRITSSSFTPRSLLCHLT---QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           +I G    ++F+    LC +     +FP   N VT    Y ++ID   K+  +  AL  F
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFP---NVVT----YTAMIDGLCKNGSTSLALEMF 623

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
           ++M++ G  P   T++SL+  + +    ++    F+E  R  +  D  ++  +I+    +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC--------------------CKNG---- 224
           G +  AF  L ++ + G  P +  Y  LI G                     C  G    
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 743

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D +   ++  K+ EL    +      L+  L   G   +  E    M   G+ P    YN
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+        V     +F  M  +    ++  Y  LIC LC+  R +EA    + M M 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
             +P+ +    LIDG    G  D      + +++    PS   Y +L R  SK  + K  
Sbjct: 864 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHV 923

Query: 405 SDLVREMEE 413
           +  + +++ 
Sbjct: 924 AGCITKVKR 932


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 285/559 (50%), Gaps = 27/559 (4%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLS--KMSSHSHAAAQTLILKI-ISGRITS 80
           P  A   F+WAS+Q G  H   + + +   LL   ++    H      ILK      IT 
Sbjct: 4   PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCH------ILKNGWPPGITP 57

Query: 81  SSFTPRSLL------------CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           + FT   ++            C L +     S PV  + +Y  +I A  K+R + +AL Y
Sbjct: 58  NVFTYAVVIQGLCKSGDLDKACELLEEM-RESGPVPDAAIYNFVIHALCKARNTAKALDY 116

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F  M          T+  ++  + K+    +   +F++ + K  + + +++ +LI G C+
Sbjct: 117 FRSM---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              +++A+ +L +++E G +PNVV Y+++I G C+   ++ A  LFR++ E G +    T
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ GL +NGL  + +E  ++M+  G+ P  ++Y+ L+   C  GK+    K+F++  
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           + +   +VV Y+TLI GLCK  R+ EA +L ++M+     P+V+T+  L+DG C      
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A ++   ++    +P+V+TY+ LI    K G  + A ++ + M  RGI P+ VTY  LI
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
             F  ++ ++ A  +   M  +G  PD+ TY  LI GLC  G   EA++LF  M      
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 473

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + Y+ +I G+CK      A  L  +M ++ ++P++ ++S+ +   C  G   +AE L
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L +M+     P V  Y  L
Sbjct: 534 LEEMVASDCSPDVYTYTSL 552



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    +    D A   F QM+++G  P   T+N+LL  + ++   D+ +    E R
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ D +S+  L+ G C+ G ++ A +V          P+VV Y++LI G CK G ++
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ E        T+T L+ GL K    ++  +  E M+    +P++ TY+ LI
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V +  ++F  M  R +  NVVTYN+LI G C    V  A  L+++M   G  
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LIDG C  G   +A RLF  +K+   +P V+TY+ LI  F K     MA  L
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M ++ + P  VT++ L++ +  +  ++ A  +   M  S  SPDVYTY  L+ G C 
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M EA ++   M +   +PN V Y  +I  +C+ G    A RLL EM   G+ PN+ +
Sbjct: 559 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVIT 618

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y S IG  C  G   EA  +L ++
Sbjct: 619 YRSLIGGFCGTGDLEEARKILERL 642



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 234/461 (50%), Gaps = 5/461 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +I+   K     +A     +M +SG+ P   T+++++    +    D  +  F    
Sbjct: 164 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 223

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN C   L  Y+   L+ G C  G +++A+E+L+++ E G  P+   Y +L+ G CK G 
Sbjct: 224 ENGCMPNLVTYN--TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 281

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I+ A  +F              Y+ LI GL K G   +  + +EKM+ N   P + T+  
Sbjct: 282 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTA 341

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   ++ E  ++ + M  R    NV+TY++LI GLCK  +V++A+ +  +M + G
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I PNV+TYN LI GFC     D A  L  ++ + G  P ++TYN LI    K G +  A+
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  +M+ +   P  +TY+ LI  F + + ++ A  ++  M K    PDV T+  L+ G 
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G + +A +L   M  +   P+   Y  ++ G+CK G    A R+L  M ++G  PN+
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y++ I   C+ GK   A  LL +M+  G++P+V  Y  L
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 229/448 (51%), Gaps = 5/448 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--E 166
           Y ++I    K+   D+A   F +M ++   P   TF +L+  + K     +        E
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R     +V ++  LI G C+ G +  A EV  ++   G  PNVV Y SLI G C    +
Sbjct: 364 DR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A +L  ++   G +    TY  LI GL K G   +    +  M+    +P + TY+CL
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C   ++     LFD+M  + V  +VVT++TL+ G C    V +AERLL++M  +  
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP+V TY  L+DGFC  G   +A R+  ++   G  P+VVTY  LI AF +AG   +A  
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGL 465
           L+ EM   G+ P+ +TY  LI  F  + D+E+A ++   +++      D++ Y V++ GL
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPN 524
           C  G M  A +L  ++ ++   P   +Y  +I G C+     +A+ +L EM   +   PN
Sbjct: 663 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 722

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQML 552
             +Y + I  L ++G+  EA  L +++L
Sbjct: 723 AEAYEAVIQELAREGRHEEANALADELL 750



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 33/235 (14%)

Query: 365 ETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           + D A R F+   K  G   +V TYN L  A  +A        +++     GITP+  TY
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM-- 481
            ++I    +S D++KA E+   M++SG  PD   Y  +IH LC   N  +A   F SM  
Sbjct: 63  AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC 122

Query: 482 ------WETKLE------------------------PNDVVYNMMIFGYCKEGNSYRALR 511
                 W   ++                        PN+  YN++I G+CK    +RA  
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LL EM E GL PN+ +YS+ I   C+  K   A  L  QM++ G  P++  YN L
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 240/452 (53%), Gaps = 36/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           +  +IDA  ++   D A+     M + G++P   TFNS+L  + K   FDK   +F + +
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +C V  DV SF ILI G C  G++ +A +   ++++ G +P+VV ++ LI      G ++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFK------------------------------ 257
            A    R++  LGLV     YT++I G  +                              
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 258 NGLQK-----DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           NGL K     D  E   +M+  GV+P L T+  LIH YC +G   +  +LFD + H+ + 
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VV YN+LI G+C++  + +A  L D M    I PN +TY+ LID  C+ G+ ++AF  
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            +++ S G  P+++TYN +I+ + ++GN K     +++M +  I P  +T+  LI  +++
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
            ++M  AF ++++M+K    PD  TY ++I+G   +GNM+EA ++F  M  + +EP+   
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYT 614

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           Y  +I G+   GNS  A +L  EM  +G  P+
Sbjct: 615 YMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 265/569 (46%), Gaps = 82/569 (14%)

Query: 67  QTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
           Q+L+L++   R  S      SLL         +S+P  + ++++ +I  + +SR   +A 
Sbjct: 57  QSLLLRMSRRRGASRREIVSSLL---------ASSPTPQPQVFDLLIRTYTQSRKPREAF 107

Query: 127 FYFHQMLDSGV-----------------------------------RPRSNTFNSLLIFV 151
             F  +LD  V                                      + T N ++   
Sbjct: 108 EAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSY 167

Query: 152 IKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
            KS  FDK     SE   RC V  DV +  +LI     AGD++ A  +++ +   G  P 
Sbjct: 168 CKSLEFDKADTVISEMEKRC-VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPG 226

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +V + S++ G CK+   ++AK +FR + +  +     ++ +LI G  + G  ++  +FY+
Sbjct: 227 IVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYK 286

Query: 270 KMQLNGVSPSLYTYNCLI----------HE-------------------------YCNEG 294
           +MQ  GV+P + +++CLI          H                          +C  G
Sbjct: 287 EMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            +SE  ++ DEM       +VVTYNTL+ GLCK+ R+ +AE LL++MK  G++P++ T+ 
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G+C  G  +KA +LF+ L      P VV YN LI    + G+   A++L  +M  R
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I P+ VTY+ILIDS      +E+AF     M   G  P++ TY  +I G C  GN+K+ 
Sbjct: 467 EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG 526

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +    M +  + P+ + +N +I GY KE N + A  +   M ++ + P+  +Y+  I  
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             + G   EA  +  +M   G++P    Y
Sbjct: 587 FSEQGNMEEAGRVFKKMGASGIEPDRYTY 615


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 240/448 (53%), Gaps = 3/448 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +  S+    A+    QM++ G +P + TFN+L+  +F+    S +   L     +
Sbjct: 155 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS-EAVALVDQMVQ 213

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D+ ++G ++ G C+ GD++ A  +L ++E+     +VVIY ++IDG CK   I+ 
Sbjct: 214 RGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDD 273

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF K+   G+     TY  LI  L   G   D       M    ++P++ T++ LI 
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALID 333

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TYN LI GFC A   ++   LF ++   G   + VTYN LI+   +AG+  MA  + 
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M   G+ P  +TY+IL+D   +   +EKA  ++  +QKS   PD+YTY ++I G+C  
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++   LF S+    ++PN ++Y  MI G+C++G    A  L  EM E G +P+   Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 573

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I    +DG    +  L+ +M   G 
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGF 601



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/450 (33%), Positives = 236/450 (52%), Gaps = 7/450 (1%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGI 180
           AL    +M+  G  P   T +SLL     S           +    VE+    D  +F  
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ---MVEMGYKPDTVTFNT 190

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G       ++A  +++Q+ + G  P++V Y ++++G CK GDI+ A  L +K+ +  
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           + A    Y  +I GL K     D F  + KM+  G+ P ++TYN LI   CN G+ S+  
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L   M  R++  NVVT++ LI    KE ++ EAE+L D+M    I P++ TY+ LI+GF
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C     D+A  +F  + S    P+VVTYN LI+ F KA   +   +L REM +RG+  + 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI    ++ D + A +++  M   G  PD+ TY +L+ GLC  G +++A  +F  
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + ++K+EP+   YN+MI G CK G       L   ++ KG+ PN+  Y++ I   C+ G 
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
             EA+ L  +M + G  P    YN L RA+
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRAR 580



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 225/448 (50%), Gaps = 7/448 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSF 178
           D A+  F +M+ S   P    FN LL  + K   FD   L  S        ++  D+YS+
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFD---LVISLGERMQNLRISYDLYSY 118

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            ILI   C    L  A  VL ++ ++G+ P++V  +SL++G C +  I  A  L  ++ E
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           +G      T+  LI GLF +    +     ++M   G  P L TY  +++  C  G +  
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              L  +M   ++  +VV YNT+I GLCK   + +A  L ++M+  GI P+V TYN LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C+ G    A RL + +     +P+VVT++ LI AF K G    A  L  EM +R I P
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
              TY+ LI+ F   D +++A  M+ LM      P+V TY  LI G C    ++E  +LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  L  N V YN +I G  + G+   A ++  +M   G+ P+I +YS  +  LC+ 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           GK  +A V+   + K  ++P +  YNI+
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIM 506



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 181/362 (50%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K +  D A   F++M   G+RP   T+NSL+  +   C++    D   L 
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL---CNYGRWSDASRLL 313

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +    K+  +V +F  LI    + G L +A ++ +++ +    P++  Y+SLI+G C +
Sbjct: 314 SNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY  LI G  K    ++G E + +M   G+  +  TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI      G      K+F +M    V  +++TY+ L+ GLCK  ++++A  + + ++ 
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P++ TYN +I+G C AG+ +  + LF  L   G  P+V+ Y  +I  F + G  + 
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L REM+E G  P    Y  LI + +R  D   + E+   M+  GF  D  T  ++I+
Sbjct: 554 ADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613

Query: 464 GL 465
            L
Sbjct: 614 ML 615



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 139/275 (50%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF EM       ++V +N L+  + K  +      L ++M+   IS ++ +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+ FC   +   A  +  ++   G  P +VT + L+  +  +     A  LV +M E 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  VT+  LI      +   +A  +   M + G  PD+ TYG +++GLC +G++  A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M + K+E + V+YN +I G CK  +   A  L  +M  KG+ P++ +Y+S I  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC  G+W +A  LL+ M++  + P+V  ++ L  A
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDA 334



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D   K    ++AL  F  +  S + P   T+N ++  + K+   + GW LF S +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V  +  +I G C  G   +A  +  +++E G  P+   Y +LI    ++GD  
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 587

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            +  L +++   G V    T +++I  L    L+K   E
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/426 (33%), Positives = 241/426 (56%), Gaps = 3/426 (0%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           ++N LL+ + +    D+    ++E  N   V  ++Y+   ++    + G++ +A   +++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVP-NIYTLNTMVNAYSKMGNIVEANLYVSK 239

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + + G SP+   YTSLI G C+N D+  A  +F  +   G    + +YT +I GL + G 
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             +G   ++KM+ +   P++ TY  +IH      +  EG  LF+EMR R    NV TY  
Sbjct: 300 IDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++  +CKE ++ E+ R+L++M   G+ P+V+TYN LI G+C+ G  + A  +   ++SN 
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P+  TYN LI  FSK  +   A  L+ +M E  +TPS VTY  LI    ++   + A+
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           ++  L++++G  PD +TY V I  LC    M+EA  LFNS+ E  ++ N+V+Y  +I G+
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G    A+ LL  M+ +  +PN ++Y+S I  +C++GK  E   ++  M K+G+KP+V
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599

Query: 561 SLYNIL 566
           + Y IL
Sbjct: 600 ATYTIL 605



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 163/554 (29%), Positives = 280/554 (50%), Gaps = 10/554 (1%)

Query: 15  NLISRMAKLPPLKAFSLFNWAS--RQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           +L +    L P  A   FN     + G +HT +S S +L++L+    ++     + + + 
Sbjct: 89  SLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIP---NNLFGVGEKIRIS 145

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFH 130
           +I   ++      R LL  L Q+    ++   K   R Y  ++    +  + D+    + 
Sbjct: 146 MIKACVSVDDI--RFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYT 203

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +ML+  + P   T N+++    K  +  +  L+ S+  +  +  D +++  LI G C   
Sbjct: 204 EMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D+N A++V N +   G   N V YT++I G C+ G I+    LF+K+ E     T  TYT
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYT 323

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           V+I  LF N    +G + + +M+     P+++TY  ++   C E K+ E  ++ +EM  +
Sbjct: 324 VIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK 383

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +VVTYN LI G C+E R++ A  +L  M+     PN  TYN+LI GF       KA
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L +++  +  +PS+VTYN LI    KAG+   A  L+  ++E G+ P + TY++ ID+
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +S  ME+A ++++ +++ G   +   Y  LI G C  G + EA  L   M      PN
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN +I+G CKEG     L ++  M++ G+ P +A+Y+  I  + ++G +  A  + N
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623

Query: 550 QMLKLGLKPSVSLY 563
           QM+  G KP V  Y
Sbjct: 624 QMVSFGHKPDVYTY 637



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 212/425 (49%), Gaps = 1/425 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +II    ++   D+ +  F +M +    P   T+  ++  +  +    +G   F+E R
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMR 346

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  E +V+++ +++   C+   L+++  +LN++ E G  P+VV Y +LI G C+ G IE
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +        + TY  LICG  K            KM  + ++PSL TYN LI
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G     +KL D ++   +  +  TY+  I  LCK  R++EA  L + +K  GI 
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y  LIDG C AG+ D+A  L  ++ S    P+  TYN LI    K G  +    +
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V  M + G+ P+  TYTILI+  +R  D + A  +++ M   G  PDVYTY   IH  C 
Sbjct: 587 VENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCT 646

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN+KEA  +   M E  + P+ + Y ++I  Y + G +Y A  +L  M + G  P+   
Sbjct: 647 SGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPI 706

Query: 528 YSSTI 532
           +++ I
Sbjct: 707 WNNLI 711



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 188/390 (48%), Gaps = 4/390 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLE----EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +IK C    D+    + L Q+     ++ F  +V  Y  L+    +   I+  K ++ ++
Sbjct: 146 MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM 205

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +V   +T   ++    K G   +   +  K+   G+SP  +TY  LI  YC    V
Sbjct: 206 LNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDV 265

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +  +K+F+ M ++    N V+Y T+I GLC+  R+ E   L  +M+     P V TY  +
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVI 325

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I          +   LFN+++     P+V TY V++ A  K      +  ++ EM E+G+
Sbjct: 326 IHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            PS VTY  LI  +     +E A E+  LM+ +   P+  TY  LI G   + ++ +A  
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L + M E+KL P+ V YN +I   CK G+   A +LL  + E GLVP+  +YS  I  LC
Sbjct: 446 LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC 505

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  EA  L N + + G+K +  +Y  L
Sbjct: 506 KSKRMEEACDLFNSLKEKGIKANEVMYTAL 535



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           +++  F+  D+M++   +Y+ M      P++YT   +++     GN+ EA+   + +++ 
Sbjct: 187 MMLARFLMIDEMKR---VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQA 243

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L P+   Y  +I GYC+  +   A ++   M  KG   N  SY++ I  LC+ G+  E 
Sbjct: 244 GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEG 303

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             L  +M +    P+V  Y ++  A
Sbjct: 304 ISLFKKMREDDCYPTVRTYTVIIHA 328


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 277/547 (50%), Gaps = 19/547 (3%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSK--MSSHSHAAAQTLILKIISGRITSS 81
           P+ A   F WA RQ G + +  S S+IL +L     M S      + + +K+ +G I   
Sbjct: 61  PVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVV 120

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
           S +  S+             P  K  L + ++  ++K  L ++ L  F++M+  G+ P  
Sbjct: 121 SSSEVSM-------------PSVKLIL-DLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDV 166

Query: 142 NTFNSLL-IFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              N +L +   +  + D     ++    C +   V ++  ++   C+ G + +A ++L 
Sbjct: 167 KNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLF 226

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           Q++ MG SPN V Y  L++G   +G++E+AK L + +  LGL  + +TY  LI G  + G
Sbjct: 227 QMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKG 286

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             ++     E+M   G  P++ TYN +++  C  G+VS+  KL D M ++ +  ++V+YN
Sbjct: 287 QIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 346

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G  +   + EA  L  +++   ++P+V+TYN LIDG C  G+ D A RL +++  +
Sbjct: 347 TLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKH 406

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P V T+   +R F K GN  MA +L  EM  RG+ P    Y   I   ++  D  KA
Sbjct: 407 GPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 466

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F M   M   GF PD+ TY V I GL   GN+KEAS+L   M    L P+ V Y  +I  
Sbjct: 467 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 526

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +   G+  +A  L  EM  KG+ P++ +Y+  I      G+   A +   +M + G+ P+
Sbjct: 527 HLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 586

Query: 560 VSLYNIL 566
           V  YN L
Sbjct: 587 VITYNAL 593



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 180/348 (51%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           ++ +I+ A+ ++  + E G+  T  TY  ++    K G+ ++  +   +MQ  G SP+  
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN L++   + G++ +  +L  +M    +  +V TY+ LI G C++ +++EA RL ++M
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G  P V+TYN ++ G C  G    A +L + + +    P +V+YN LI  +++ GN 
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L  E+  R + PS VTY  LID   R  D++ A  +   M K G  PDV+T+   
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + G C  GN+  A +LF+ M    L+P+   Y   I G  K G+  +A  +  EM  +G 
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            P++ +Y+  I  L + G   EA  L+ +ML  GL P    Y  +  A
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 526



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +I     AG L KA  +  ++   G  P+VV YT LI      G ++ A + F
Sbjct: 516 DHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 575

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ E G+     TY  LI GL K       + F+ +MQ  G+SP+ YTY  LI+E CN 
Sbjct: 576 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNL 635

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           G   E  +L+ +M  RE+  +  T+ +L+  L K+ ++     L
Sbjct: 636 GHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHL 679


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 242/459 (52%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y+ +I+     + S +A     +M+D G++P   T+N+L+   ++    ++ +    E  
Sbjct: 279 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 338

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C +E ++  +  L+ G C+AG + KA E++ ++ E G  P+   Y+ LI+G C+  ++ 
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 398

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++ +  L  T  TY+V+I GL + G  +       +M +NG+ P+   Y  L+
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  EG+V E   + + MR + +  +V  YN+LI G CK  R++EA   L +M    + 
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY   IDG+  AGE + A R FN++ S G  P+V  Y  LI    K GN   A  +
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R +  R +     TY++LI    R+  M +AF ++S +Q+ G  P+ +TY  LI G C 
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +GN+ +AS+L   M    + P+ V YN++I G CK G   RA  L  ++  +GL PN  +
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ +   C+      A  LL +ML  G+ P   +YN++
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 246/502 (49%), Gaps = 37/502 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           ++ ++++   K+   ++AL    +M++ GV P S T++ L+    +  +  + +    E 
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + K+   V ++ ++I G C  G+L     +L ++   G  PN V+YT+L+    K G +
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467

Query: 227 ERAKMLFRKIGELGLVA-----------------------------------TQHTYTVL 251
           E ++M+  ++ E G++                                      HTY   
Sbjct: 468 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 527

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G  +    ++ +M   GV P++  Y  LI  +C EG V+E F +F  +  R V
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V TY+ LI GL +  ++ EA  +  +++  G+ PN  TYN LI G C  G  DKA +
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++   G +P +VTYN+LI    KAG  + A +L  ++E RG+TP+ VTY  ++D + 
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +S +   AF++   M   G  PD + Y V+++  C +   ++A  LF  M E     + V
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTV 766

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +N +I GYCK G    A  LL EM EK  +PN  +Y+S I   C+ G   EA+ L  +M
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826

Query: 552 LKLGLKPSVSLYNILYRAKNNI 573
            +  + P+   Y  L    +NI
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNI 848



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 246/490 (50%), Gaps = 43/490 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++ AH K    +++     +M + G+ P    +NSL+I   K+   ++   +  E 
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              ++  + +++G  I G  +AG++  A    N++   G  PNV IYT+LI+G CK G++
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +FR I    ++    TY+VLI GL +NG   + F  + ++Q  G+ P+ +TYN L
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C +G V +  +L +EM  + +  ++VTYN LI GLCK   ++ A+ L D ++  G+
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
           +PN +TY  ++DG+C +     AF+L  ++   G  P                       
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                      S V++N LI  + K+G  + A+ L+ EM E+   P+ VTYT LID   +
Sbjct: 753 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 812

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  M +A  ++  MQ+    P   TY  L+HG    GNM E S LF  M    +EP+ + 
Sbjct: 813 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 872

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS---STIGVLCQD----GKWPEAE 545
           Y +MI  YC+EGN   A +L  E+  KG+ P  + +     T  V+ +     G   EA 
Sbjct: 873 YYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGFRLGLPTCSVIARGFQIAGNMDEAA 931

Query: 546 VLLNQMLKLG 555
            +L  M+K G
Sbjct: 932 EVLRSMVKFG 941



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 2/442 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
             +M+ +G++P +  + +L+    K    ++  +     R +  L DV+ +  LI G C+
Sbjct: 439 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 498

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           A  + +A   L ++ E    PN   Y + IDG  K G++E A   F ++   G++     
Sbjct: 499 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 558

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI G  K G   + F  +  +    V   + TY+ LIH     GK+ E F +F E++
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  N  TYN+LI G CK+  V +A +LL++M + GI+P+++TYN LIDG C AGE +
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF+ ++  G +P+ VTY  ++  + K+ N   A  L+ EM  RG+ P    Y +++
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   + +  EKA +++  M + GF+  V ++  LI G C  G ++EA+ L   M E +  
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN V Y  +I   CK G    A RL  EM E+ ++P   +Y+S +      G   E   L
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
             +M+  G++P    Y ++  A
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDA 879



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 275/597 (46%), Gaps = 62/597 (10%)

Query: 25  PLKAFSLFNWAS-RQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +  + F W+  + G     Q + ++  L ++  +S+ +  A  LI  II      +S 
Sbjct: 78  PKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIR-----NSD 132

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           +P ++L  + + +  S N    S +++ ++D++ K     +A+  F    +   RP   +
Sbjct: 133 SPLAVLGSIVKCY-RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLS 191

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRC--KVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            NSLL  ++K    +  W  F +  C  KV  DVY++  +I   C+ G++  A  VL ++
Sbjct: 192 CNSLLGDLLKGNKVELFWKVF-DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM 250

Query: 202 EE----------------------------------------------------MGFSPN 209
            E                                                    +G  P 
Sbjct: 251 GEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 310

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
            + Y +LIDG  + GDIE+A  +  ++   G+ A    +  L+ G+ K G  +   E  +
Sbjct: 311 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M   GV P   TY+ LI  +C    ++  F+L DEM+ R++A  V+TY+ +I GLC+  
Sbjct: 371 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +Q    +L +M M G+ PN + Y  L+      G  +++  +  +++  G  P V  YN
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 490

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI  F KA   + A   + EM ER + P+  TY   ID + ++ +ME A   ++ M   
Sbjct: 491 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 550

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P+V  Y  LI G C +GN+ EA  +F  +   ++  +   Y+++I G  + G  + A
Sbjct: 551 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 610

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +  E+ EKGL+PN  +Y+S I   C+ G   +A  LL +M   G+ P +  YNIL
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNIL 667



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 214/416 (51%), Gaps = 8/416 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I+ H K     +A   F  +L   V     T++ L+  + ++    + +  FSE 
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K  L + +++  LI G C+ G+++KA ++L ++   G +P++V Y  LIDG CK G+I
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERAK LF  I   GL     TY  ++ G  K+      F+  E+M L GV P  + YN +
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C E K  +   LF EM  +  A + V++NTLI G CK  ++QEA  LL++M     
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 796

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY  LID  C AG   +A RL+ +++     P+  TY  L+  +   GN    S 
Sbjct: 797 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 856

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS------LMQKSGFSPDVYTYGV 460
           L  EM  +GI P ++TY ++ID++ R  ++ +A ++        +  KSGF   + T  V
Sbjct: 857 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSV 916

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           +  G  + GNM EA+++  SM +     N      ++ G     NS  +  LL +M
Sbjct: 917 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 53/363 (14%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           SPN VI+  L+D              +RK+G          + V    +F   L    FE
Sbjct: 151 SPNSVIFDMLMDS-------------YRKMG----------FLVEAVNVF---LGPKNFE 184

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F          PSL + N L+ +     KV   +K+FD M   +V  +V TY  +I   C
Sbjct: 185 F---------RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHC 235

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K   V++A+R+L +M   G    ++               D+A  L   +   G  P + 
Sbjct: 236 KVGNVKDAKRVLLEM---GEKARLL---------------DEAIELKRSMVDKGLVPDLY 277

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY++LI  F     S+ A  ++ EM + G+ P  +TY  LID F+R  D+E+AF +   M
Sbjct: 278 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 337

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G   ++  +  L++G+C  G M++A ++   M E  +EP+   Y+++I G+C+  N 
Sbjct: 338 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 397

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            RA  LL EM ++ L P + +YS  I  LC+ G       +L +M+  GLKP+  +Y  L
Sbjct: 398 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457

Query: 567 YRA 569
             A
Sbjct: 458 MTA 460


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 242/459 (52%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y+ +I+     + S +A     +M+D G++P   T+N+L+   ++    ++ +    E  
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C +E ++  +  L+ G C+AG + KA E++ ++ E G  P+   Y+ LI+G C+  ++ 
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 407

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++ +  L  T  TY+V+I GL + G  +       +M +NG+ P+   Y  L+
Sbjct: 408 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  EG+V E   + + MR + +  +V  YN+LI G CK  R++EA   L +M    + 
Sbjct: 468 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 527

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY   IDG+  AGE + A R FN++ S G  P+V  Y  LI    K GN   A  +
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 587

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R +  R +     TY++LI    R+  M +AF ++S +Q+ G  P+ +TY  LI G C 
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +GN+ +AS+L   M    + P+ V YN++I G CK G   RA  L  ++  +GL PN  +
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ +   C+      A  LL +ML  G+ P   +YN++
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 256/497 (51%), Gaps = 35/497 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++ AH K    +++     +M + G+ P    +NSL+I   K+   ++   +  E 
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              ++  + +++G  I G  +AG++  A    N++   G  PNV IYT+LI+G CK G++
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +FR I    ++    TY+VLI GL +NG   + F  + ++Q  G+ P+ +TYN L
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C +G V +  +L +EM  + +  ++VTYN LI GLCK   ++ A+ L D ++  G+
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
           +PN +TY  ++DG+C +     AF+L  ++   G  P                       
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                      S V++N LI  + K+G  + A+ L+ EM E+   P+ VTYT LID   +
Sbjct: 762 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  M +A  ++  MQ+    P   TY  L+HG    GNM E S LF  M    +EP+ + 
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y +MI  YC+EGN   A +L  E+  KG+  ++A+Y + I  LC+  ++ E   LLN++ 
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941

Query: 553 KLGLKPSVSLYNILYRA 569
           + G +  +   +++ R 
Sbjct: 942 ESGFRLGLPTCSVIARG 958



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 246/502 (49%), Gaps = 37/502 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           ++ ++++   K+   ++AL    +M++ GV P S T++ L+    +  +  + +    E 
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + K+   V ++ ++I G C  G+L     +L ++   G  PN V+YT+L+    K G +
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476

Query: 227 ERAKMLFRKIGELGLVA-----------------------------------TQHTYTVL 251
           E ++M+  ++ E G++                                      HTY   
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 536

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G  +    ++ +M   GV P++  Y  LI  +C EG V+E F +F  +  R V
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V TY+ LI GL +  ++ EA  +  +++  G+ PN  TYN LI G C  G  DKA +
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++   G +P +VTYN+LI    KAG  + A +L  ++E RG+TP+ VTY  ++D + 
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +S +   AF++   M   G  PD + Y V+++  C +   ++A  LF  M E     + V
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTV 775

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +N +I GYCK G    A  LL EM EK  +PN  +Y+S I   C+ G   EA+ L  +M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835

Query: 552 LKLGLKPSVSLYNILYRAKNNI 573
            +  + P+   Y  L    +NI
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNI 857



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 286/615 (46%), Gaps = 80/615 (13%)

Query: 25  PLKAFSLFNWAS-RQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +  + F W+  + G     Q + ++  L ++  +S+ +  A  LI  II      +S 
Sbjct: 69  PKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIR-----NSD 123

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           +P ++L  + + +  S N    S +++ ++D++ K     +A+  F    +   RP   +
Sbjct: 124 SPLAVLGSIVKCY-RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLS 182

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRC--KVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            NSLL  ++K    +  W  F +  C  KV  DVY++  +I   C+ G++  A  VL ++
Sbjct: 183 CNSLLGDLLKGNKVELFWKVF-DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM 241

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            E G SPN+V Y  +I G C+   ++ A  L R + + GLV   +TY +LI G       
Sbjct: 242 GEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 301

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++      +M   G+ P   TYN LI  +  +G + + F++ DEM    +  N++ +NTL
Sbjct: 302 REAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 361

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           + G+CK  ++++A  ++ +M   G+ P+  TY+ LI+G C      +AF L +++K    
Sbjct: 362 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           +P+V+TY+V+I    + GN +  + ++REM   G+ P+ V YT L+ +  +   +E++  
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481

Query: 442 MYSLMQKSGFSPDVY-----------------------------------TYGVLIHGLC 466
           +   M++ G  PDV+                                   TYG  I G  
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS 541

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS-------------------- 506
             G M+ A + FN M    + PN  +Y  +I G+CKEGN                     
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601

Query: 507 ---------------YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
                          + A  +  E+ EKGL+PN  +Y+S I   C+ G   +A  LL +M
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661

Query: 552 LKLGLKPSVSLYNIL 566
              G+ P +  YNIL
Sbjct: 662 CIKGINPDIVTYNIL 676



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 221/445 (49%), Gaps = 2/445 (0%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y ++I+ H K     +A   F  +L   V     T++ L+  + ++    + +  FSE 
Sbjct: 567  IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 168  RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + K  L + +++  LI G C+ G+++KA ++L ++   G +P++V Y  LIDG CK G+I
Sbjct: 627  QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            ERAK LF  I   GL     TY  ++ G  K+      F+  E+M L GV P  + YN +
Sbjct: 687  ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            ++  C E K  +   LF EM  +  A + V++NTLI G CK  ++QEA  LL++M     
Sbjct: 747  LNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             PN +TY  LID  C AG   +A RL+ +++     P+  TY  L+  +   GN    S 
Sbjct: 806  IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L  EM  +GI P ++TY ++ID++ R  ++ +A ++   +   G    V  Y  LI  LC
Sbjct: 866  LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             K    E  KL N + E+         +++  G+   GN   A  +L  M + G V N  
Sbjct: 926  KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQM 551
            S    +          +++ LL QM
Sbjct: 986  SLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 181/363 (49%), Gaps = 35/363 (9%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           SPN VI+  L+D              +RK+G          + V    +F   L    FE
Sbjct: 142 SPNSVIFDMLMDS-------------YRKMG----------FLVEAVNVF---LGPKNFE 175

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F          PSL + N L+ +     KV   +K+FD M   +V  +V TY  +I   C
Sbjct: 176 F---------RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHC 226

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K   V++A+R+L +M   G SPN++TYN +I G C A   D+A  L   +   G  P + 
Sbjct: 227 KVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLY 286

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY++LI  F     S+ A  ++ EM + G+ P  +TY  LID F+R  D+E+AF +   M
Sbjct: 287 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 346

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G   ++  +  L++G+C  G M++A ++   M E  +EP+   Y+++I G+C+  N 
Sbjct: 347 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 406

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            RA  LL EM ++ L P + +YS  I  LC+ G       +L +M+  GLKP+  +Y  L
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 466

Query: 567 YRA 569
             A
Sbjct: 467 MTA 469


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 174/563 (30%), Positives = 272/563 (48%), Gaps = 34/563 (6%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P KA   FN A  + +Q      +II  L+ SK+ SH+      L+  ++       S  
Sbjct: 43  PWKALEFFNAAPEKNIQLYS---AIIHVLVGSKLLSHARYLLNDLVQNLVK------SHK 93

Query: 85  PRSLLCHLTQLFPSSSNPVTKSR----LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           P     H  QL  S  + +  S+    +Y  +I    K  L ++AL  +H++   G    
Sbjct: 94  PY----HACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALT 146

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLN 199
               N LL  ++K+  F+  W  + E     +   V +FG LI GCC  GDL +A E+ +
Sbjct: 147 IQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFD 206

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++   G  P V++YT LI G C +  IE A+ + R + E+G+    +TY  L+ G  K  
Sbjct: 207 EMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLA 266

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             K     Y+ M   G+ P + T+  LI   C  G++     LF  M    V  N+  YN
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           +LI   CK   V EA  L  +++   +SP+V TY+ LI G C    T++A  +F ++   
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   + VTYN LI    K G    A ++  +M E G+ P+ +T++ LID + +  +++ A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             +YS M     SPDV TY  +I G C  G+MKEA KL++ M +  + PN    + ++ G
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDG 506

Query: 500 YCKEGNSYRALRLLGEMNE-------------KGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            CK+G    AL L  E  E             K  + N  +Y++ I  LCQDG++ +A  
Sbjct: 507 LCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVK 566

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L + M + GL+P   +Y ++ R 
Sbjct: 567 LFSDMRRYGLQPDEVIYVVMLRG 589


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 241/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL +FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TY+++I G CK+ R+  AE +   M   G SPN+IT+N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G      TYN LI  F   G+   A DL++EM   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+ +MQKS           G  PDV TY +LI 
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 237/527 (44%), Gaps = 83/527 (15%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 182 IK-----------------------------------GCCEAGDLNKAFEVLNQLEEMGF 206
           IK                                   G C    +++A +  +Q+ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG------------ 254
            PNVV +T+L++G C+ G I  A  L  ++ E GL  TQ TY  ++ G            
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 255 ------------------------LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                   L K+G   D    + +MQ  G+ P L+TYN +I  +
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+ S+  +L  EM  R+++ +VVTYN LI    KE +  EAE L D+M   GI PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITY+ +IDGFC     D A  +F  + + G SP+++T+N LI  +  A       +L+ E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G+     TY  LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 471 MKEASKLFNSMWETK-----------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +K+A ++F  M ++K           +EP+   YN++I G   EG    A  L  EM  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+VP+  +YSS I  LC+  +  EA  + + M      P+V  +  L
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ +F  LI G C A  ++   E+L+++ E G   +   Y +LI G    GD+ 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   GL     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           + D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  F 
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A  +   +   G SPN++ + +LIDG C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++ E GLVA   TY  LI G +  G      +  ++M  +G+ P + T + L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V TYN LI GL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F+ + S   SP+VVT+  LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI  + +TY  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ GL  K  +K A  +   +
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y+S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+  LI G        DG E   +M   G+     TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +   G ++    L  EM    +  ++VT +TL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            TY  LI G    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT+  L+           A D   +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C KG+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++ ILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
              F+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 172/537 (32%), Positives = 273/537 (50%), Gaps = 43/537 (8%)

Query: 32  FNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           F W+ ++  L H   S+ +  R+L S   +  ++  ++ + K +      S     S + 
Sbjct: 19  FTWSQKEFKLSH---SLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSV----SAIF 71

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           H   +  S  +    S L + ++ A +++    +    F +  D G +    + N LL  
Sbjct: 72  HAISM--SGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSG 129

Query: 151 VIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           ++K S + D  +++    + K+EL+V SF I++ G C+ G LN+A +V+  ++  G SPN
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPN 189

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           V+ Y +LIDG CK G          +IG++                     + D     +
Sbjct: 190 VITYNTLIDGYCKMG----------RIGKM--------------------YKADAI--LK 217

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M   G+ P+  TYN LI  +C +  VS   ++F EM+ + +  NVVTYN LI GLC + 
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +V EA  L DQM  + + PNV+T+N LI+GFC     ++A  LFN ++  G  P+ +TY 
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI A+ K G  + A  L   M +RGI P   TY  LI    R  D++ A  + + M   
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
             S DV TY +LI  LC KG  ++A KL + M+E  L P+ V YN ++ GYC+EGN   A
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L +   M  KG   N+ +++  I   C  G+  +A  LLN+ML+ GL P+ + Y I+
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/385 (37%), Positives = 225/385 (58%), Gaps = 13/385 (3%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCK---NGDIERA--KMLFRKIGELGLVATQHT 247
           + FE   +  + GF  +++    L+ G  K   NGD+E    +M+ RKI EL ++    +
Sbjct: 103 RGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKI-ELNVI----S 157

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFD 304
           + +++ GL K G      +  E M++ GVSP++ TYN LI  YC  G++ + +K   +  
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM  + +  N VTYN LI G CK+  V  A R+  +M+  G+ PNV+TYN LI+G C  G
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A  L +Q+ S+   P+VVT+NVLI  F K      A +L  +ME++G+ P+ +TYT
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID++ +   ME AF +Y++M   G  P+V TY  LI GLC KG++K A  L N M   
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           KL  + V YN++I   CK+G S +A++LL EM EKGL P+  +Y++ +   C++G    A
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
            ++  +M + G + +V  +N+L + 
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKG 482


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/462 (34%), Positives = 241/462 (52%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D   K+   D+AL    +M D+G  P   T+N L+  + K+    + +  F+E R
Sbjct: 82  YNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR 141

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  + D +++  LI G  + G   KA E+L ++E  G  P+V+ Y+SLI G  K+G+  
Sbjct: 142 ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETV 201

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  LF+++   G      T+T L+  L K G   D  E  ++M+  GV P + TYN LI
Sbjct: 202 KAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +   G + E + L DEM+      +VVTY+ LI GL K  ++ EA ++L +M+  G  
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITYN LI+G   AG  + A RLF+++KS G +P VVTY+ LI A  KA   + A  L
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EME  GI P   TY  +I    ++  ++ A  ++S M+  G SPDV TY   ++ L  
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G  KEA K+F  M E+ L P+   Y+ ++ G  K      A  LL E+ E+G   +   
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +   + +L   G   EA  LL      GL P  S YN L  A
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 143/427 (33%), Positives = 216/427 (50%), Gaps = 1/427 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   T+NSLL  + K+   ++  L F E    K   DV S+  LI     AG    A EV
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           + +++  G  PN+  Y +L+D   K G  + A  L  ++ + G V    TY  LI  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G   + F  + +M+  G  P  +TYN LI+     G+  +  +L +EM       +V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y++LI GL K+    +A +L  +MK  G  P+ IT+  L+D    AG  D A  L +++K
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  P VVTYN LI  F K G+   A +L+ EM+  G  P  VTY+ LI   +++  ++
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A ++   M+K G  PD  TY  LI+GL   G + +A +LF+ M      P+ V Y+ +I
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
               K      A  L  EM   G+ P++ +Y S I VL + G+  +A+ L ++M   GL 
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 558 PSVSLYN 564
           P V  YN
Sbjct: 427 PDVITYN 433



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 243/472 (51%), Gaps = 6/472 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
           FPS  N VT    Y S+++A  K+   ++A   F ++  +   P   +++ L+  + ++ 
Sbjct: 4   FPSP-NVVT----YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAG 58

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            ++      +E + K  + +++++  L+    +AG  ++A  +L ++ + G  P+V  Y 
Sbjct: 59  KWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYN 118

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LI    K G +  A  LF ++ E G V    TY  LI GL K G  +   E  E+M+ +
Sbjct: 119 CLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH 178

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P + TY+ LI     +G+  + FKLF EM+ R    + +T+  L+  L K  RV +A
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LLD+MK  G+ P V+TYN LI GF   G+  +A+ L +++K NG  P VVTY+ LI  
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KA     A  ++++ME+ G  P  +TY  LI+   ++  +  A  ++  M+  G +PD
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  LI  L     ++ A  LF  M    ++P+   Y  +I    K G    A RL  
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EM  KGL P++ +Y++ +  L + G++ EA  +   M + GL P V+ Y+ L
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDAL 470



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/395 (34%), Positives = 198/395 (50%), Gaps = 36/395 (9%)

Query: 205 GF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           GF SPNVV Y SL++   K G  E A++LF ++          +Y+ LI  L + G  + 
Sbjct: 3   GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62

Query: 264 GFEFYEKMQLNGVSPSLY-----------------------------------TYNCLIH 288
             E   +MQ  G  P+L+                                   TYNCLI 
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                G++SE F LF EMR R    +  TYN+LI GL K  R Q+A  LL++M+  G  P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TY+ LI G    GET KAF+LF ++K  G+ P  +T+  L+ A  KAG    A +L+
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM+ERG+ P  VTY  LI  F +  D+ +A+ +   M+++G  PDV TY  LI GL   
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             + EA ++   M +    P+ + YN +I G  K G    A RL   M  KG  P++ +Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           S+ I  L +  +   A VL  +M  +G++P +  Y
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTY 397



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+I    K   S +A+    +M   G  P   T++SL+  + K     K +  F E  
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R   + D  +F  L+    +AG ++ A E+L++++E G  P VV Y +LI G  K GD+ 
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++   G      TY+ LI GL K     +  +  +KM+  G  P   TYN LI
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +     G +++  +LFD M+ +    +VVTY+TLI  L K  RV+ A  L ++M+  GI 
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ TY  +I     AG+ D A RLF++++  G SP V+TYN  + +  + G  K A  +
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M+E G+ P   TY  L+    ++ +++ A  +   + + G + D   +   +  L  
Sbjct: 452 FEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTS 511

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN+ EA +L        L P    YN +I    K G    A   L ++ E+G  P+I S
Sbjct: 512 WGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS 571

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           YSS I  L Q G+   A  LL +M K GLK S   Y+ L R
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 183/393 (46%), Gaps = 36/393 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           + +++DA  K+   D AL    +M + GV+P   T+N+L+    K     + +    E  
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281

Query: 167 -NRCKVELDVYS---------------------------------FGILIKGCCEAGDLN 192
            N CK ++  YS                                 +  LI G  +AG LN
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  + ++++  G +P+VV Y++LI    K   +E A +LF ++  +G+     TY  +I
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M+  G+SP + TYN  ++     G+  E  K+F++M+   + 
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V TY+ L+ GL K   V +A  LL ++   G + + + +++ ++     G  D+A  L
Sbjct: 462 PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL 521

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                S G  P   +YN LI A +KAG    A + + +++E+G  P  V+Y+ LI +  +
Sbjct: 522 LQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +  ++ AFE+   M K G      +Y  L+  L
Sbjct: 582 TGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 1/292 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+   K+ L + A   F +M   G  P   T+++L+  + K+   +   + F E  
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D++++  +I    +AG ++ A  + +++   G SP+V+ Y + ++   + G  +
Sbjct: 387 SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + E GL+    TY  L+ GL K     D     +++   G +     ++  +
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               + G V E  +L      + +     +YN LI  L K  RV EA   L+ +K  G  
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGK 566

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           P++++Y+ LI      G+ D AF L  ++   G   S  +Y+ L+R     G
Sbjct: 567 PDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 241/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A ++L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TY+++I G CK+ R+  AE +   M   G SPN+IT+N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G      TYN LI  F   G+   A DL++EM   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+ +MQKS           G  PDV TY +LI 
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 237/527 (44%), Gaps = 83/527 (15%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 182 IK-----------------------------------GCCEAGDLNKAFEVLNQLEEMGF 206
           IK                                   G C    +++A  + +Q+ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG------------ 254
            PNVV +T+L++G C+ G I  A  L  ++ E GL  TQ TY  ++ G            
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 255 ------------------------LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                   L K+G   D    + +MQ  G+ P L+TYN +I  +
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+ S+  +L  EM  R+++ +VVTYN LI    KE +  EAE L D+M   GI PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITY+ +IDGFC     D A  +F  + + G SP+++T+N LI  +  A       +L+ E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G+     TY  LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 471 MKEASKLFNSMWETK-----------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +K+A ++F  M ++K           +EP+   YN++I G   EG    A  L  EM  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+VP+  +YSS I  LC+  +  EA  + + M      P+V  +  L
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ +F  LI G C A  ++   E+L+++ E G   +   Y +LI G    GD+ 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   GL     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           + D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  F 
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A  +   +   G SPN++ + +LIDG C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++ E GLVA   TY  LI G +  G      +  ++M  +G+ P + T + L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V TYN LI GL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F+ + S   SP+VVT+  LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI  + +TY  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ GL  K  +K A  +   +
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y+S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+  LI G        DG E   +M   G+     TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +   G ++    L  EM    +  ++VT +TL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            TY  LI G    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT+N L+           A +L  +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C  G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++TILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
             LF+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/454 (33%), Positives = 230/454 (50%), Gaps = 15/454 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G+ P   TF +LL  +       +    F +  C+   DV +F  L+ G
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-ICRP--DVLTFTTLMNG 191

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  P+ + Y + +DG CK GD   A  L RK+ E+  +  
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL K+G   D    + +MQ  G+ P++ TYNC+I  +C  G+ S   +L 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R+++ NVVTYN LI    KE +  EA  L D+M   GI PN ITYN +IDGFC  
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D A  +F  + + G SP V T+  LI  +  A       +L+ EM  RG+  + VTY
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G +K+A ++F +M +
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 484 TKL-----------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +K+           EP+ + YN++I G   EG    A  L  EM  +G+VP+  +YSS I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  EA  +   M      P+V  +N L
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 229/457 (50%), Gaps = 17/457 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    FN L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C    L  A     +L ++G  P+VV +T+L+ G C +  +  A  LF +I    +
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDV 182

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+T L+ GL + G   +     ++M  NG+ P   TY   +   C  G       
Sbjct: 183 L----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV Y+ +I GLCK+ R  ++  L  +M+  GI PN++TYN +I GF
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A RL  ++     SP+VVTYN LI AF K G    A++L  EM  RGI P+ 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  +ID F + D ++ A +M+ LM   G SPDV+T+  LI G C    + +  +L + 
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L  N V YN +I G+C  G+   AL L  +M   G+ P+I + ++ +  LC +GK
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 237/501 (47%), Gaps = 58/501 (11%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVEL 173
           L  R+S +AL  FHQ+     RP   TF +L+  + +     +         EN   ++ 
Sbjct: 163 LDHRVS-EALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN--GLQP 215

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKML 232
           D  ++G  + G C+ GD   A  +L ++EE+    PNVVIY+++IDG CK+G    +  L
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F ++ + G+     TY  +I G   +G         ++M    +SP++ TYN LI+ +  
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EGK  E  +L+DEM  R +  N +TYN++I G CK+ R+  AE +   M   G SP+V T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  LIDG+C A   D    L +++   G   + VTYN LI  F   G+   A DL ++M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVL 461
             G+ P  VT   L+D    +  ++ A EM+  MQKS           G  PDV TY +L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 462 I-----------------------------------HGLCMKGNMKEASKLFNSMWETKL 486
           I                                    GLC +  + EA+++F SM     
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN V +N +I GYCK G     L L  EM  +G+V +   Y + I    + G    A  
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 547 LLNQMLKLGLKP-SVSLYNIL 566
           +  +M+  G+ P ++++ N+L
Sbjct: 636 IFQEMISSGVYPDTITIRNML 656



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 18/451 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y + +D   K   +  AL    +M + S ++P    +++++  + K          F E 
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM 279

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  ++ ++  +I G C +G  + A  +L ++ E   SPNVV Y +LI+   K G  
Sbjct: 280 QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++   G++    TY  +I G  K        + +  M   G SP ++T+  L
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   ++ +G +L  EM  R +  N VTYNTLI G C    +  A  L  QM  +G+
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            P+++T N L+DG CD G+   A  +F  ++            NG  P V+TYN+LI   
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L  EM  RGI P  +TY+ +ID   +   +++A +M+  M    FSP+V
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  LI+G C  G + +  +LF  M    +  + ++Y  +I+G+ K GN   AL +  E
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           M   G+ P+  +  + +      G W + E+
Sbjct: 640 MISSGVYPDTITIRNML-----TGFWSKEEL 665



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 16/363 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++I+A +K     +A   + +ML  G+ P + T+NS++    K    D
Sbjct: 320 SPNVVT----YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 159 KGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
               +F+         DV++F  LI G C A  ++   E+L+++   G   N V Y +LI
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ----- 272
            G C  GD+  A  L +++   G+     T   L+ GL  NG  KD  E ++ MQ     
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 273 ------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
                  NGV P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLC
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K+ R+ EA ++   M     SPNV+T+N LI+G+C AG  D    LF ++   G     +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            Y  LI  F K GN   A D+ +EM   G+ P  +T   ++  F   +++E+A  M   +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675

Query: 447 QKS 449
           Q S
Sbjct: 676 QMS 678



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 202/444 (45%), Gaps = 23/444 (5%)

Query: 54  LLSKMSSHSHAAAQTLILK-IISGRITSSSFTPRSLLCHLTQ---LFPSSSNPVTKSRLY 109
           LL KM   SH     +I   II G       +    L    Q   +FP   N VT    Y
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP---NIVT----Y 291

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
             +I     S     A     +ML+  + P   T+N+L+   +K   F +    + E   
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 170 K-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           + +  +  ++  +I G C+   L+ A ++   +   G SP+V  +T+LIDG C    I+ 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L  ++   GLVA   TY  LI G    G      +  ++M  +GV P + T N L+ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 289 EYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAERL 337
             C+ GK+ +  ++F  M+  +           V  +V+TYN LICGL  E +  EAE L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M   GI P+ ITY+ +IDG C     D+A ++F  + S   SP+VVT+N LI  + K
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AG      +L  EM  RGI    + Y  LI  F +  ++  A +++  M  SG  PD  T
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651

Query: 458 YGVLIHGLCMKGNMKEASKLFNSM 481
              ++ G   K  ++ A  +   +
Sbjct: 652 IRNMLTGFWSKEELERAVAMLEDL 675



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 194/421 (46%), Gaps = 12/421 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K      +   F +M D G+ P   T+N ++     S  +        E 
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  +V ++  LI    + G   +A E+ +++   G  PN + Y S+IDG CK   +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+T LI G        DG E   +M   G+  +  TYN L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +C  G ++    L  +M    V  ++VT NTL+ GLC   ++++A  +   M+ +  
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V+TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+  LI+ + ++  ++   E++  M + G   D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             Y  LI+G    GN+  A  +F  M  + + P+ +    M+ G+  +    RA+ +L +
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 516 M 516
           +
Sbjct: 675 L 675



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 5/275 (1%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +V+ +N L+  + +  R      L  +M+   I  ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F +L   G  P VVT+  L+           A DL  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  +T+T L++   R   + +A  +   M ++G  PD  TYG  + G+C  G+   A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + ++PN V+Y+ +I G CK+G    +  L  EM +KG+ PNI +Y+  IG 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W  A+ LL +ML+  + P+V  YN L  A
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 63/139 (45%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A +++S M +S   P V  +  L+  +           L+  M   ++  +   + +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  +C       AL   G++ + GL P++ ++++ +  LC D +  EA  L +Q+ +  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 556 LKPSVSLYNILYRAKNNIE 574
           +    +L N L R    +E
Sbjct: 182 VLTFTTLMNGLCREGRVVE 200


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 264/520 (50%), Gaps = 15/520 (2%)

Query: 31  LFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
            F W+ ++  + +  ++   +L LL    +S  ++  ++ + K++     + S    SLL
Sbjct: 64  FFQWSQKEFRISYGLETTGKVLHLL---ANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLL 120

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
                       P   + + + ++ A++ +     A   F ++ D G +   N+ N LL 
Sbjct: 121 L-------GGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLS 173

Query: 150 FVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            ++K     +    + E  + +++ ++ +F I I G C+AG LNKA +V+  ++  GFSP
Sbjct: 174 ALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSP 233

Query: 209 NVVIYTSLIDGCCKNGD---IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           N+V Y +LIDG CK G    + RA  + +++    +   + T+  LI G  K+       
Sbjct: 234 NIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAK 293

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             +E+MQ  G+ P++ TYN LI+   N GK+ E   L+D+M    +  N+VT+N LI G 
Sbjct: 294 NAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CK+  ++EA +L D +    + PN IT+N +ID FC AG  ++ F L N +   G  P+V
Sbjct: 354 CKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TYN LI    +  N + A  L+ EME   +    VTY ILI  + +  +  KA ++   
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G  P+  TY  L+ G CM+GN+K A K+   M +     N V YN++I G+CK G 
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              A RLL EM EKGL PN  +Y      + + G  P+ E
Sbjct: 534 LEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIE 573



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 212/383 (55%), Gaps = 3/383 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +++ A EV  ++++ GF  ++     L+    K  +    + +++++ +  +     T+ 
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEM 306
           + I GL K G      +  E ++  G SP++ TYN LI  +C +G   + ++   +  EM
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
              ++  N +T+NTLI G CK+  V  A+   ++M+  G+ PN++TYN LI+G  + G+ 
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L++++   G  P++VT+N LI  F K    K A  L  ++ E+ + P+ +T+  +
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID+F ++  ME+ F +++ M   G  P+V TY  LI GLC   N++ A KL N M   +L
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           + + V YN++I G+CK+G   +A +LLGEM   G+ PN  +Y++ +   C +G    A  
Sbjct: 445 KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK 504

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           +  QM K G + +V  YN+L + 
Sbjct: 505 VRTQMEKEGKRANVVTYNVLIKG 527



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 38/291 (13%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N +  + L+      + +  A  +  +++  G   ++ + N L+       ET +   ++
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++      P++ T+N+ I    KAG    A D++ +++  G +P+ VTY  LID   + 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 434 DDMEKAFEMYSLMQK---SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
               K +   +++++   +   P+  T+  LI G C   N+  A   F  M    L+PN 
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 491 VVY-----------------------------------NMMIFGYCKEGNSYRALRLLGE 515
           V Y                                   N +I G+CK+     A +L  +
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + E+ LVPN  ++++ I   C+ G   E   L N ML  G+ P+VS YN L
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL 419



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 5/206 (2%)

Query: 372 LFNQLKSNGQSP--SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           +F+ L   G  P  + +  ++L+ A+        A ++ R +++ G   S  +   L+ +
Sbjct: 115 VFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSA 174

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            V+ ++  +   +Y  M K    P++ T+ + I+GLC  G + +A  +   +      PN
Sbjct: 175 LVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234

Query: 490 DVVYNMMIFGYCKEGNS---YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            V YN +I G+CK+G++   YRA  +L EM    + PN  ++++ I   C+D     A+ 
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN 294

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNN 572
              +M + GLKP++  YN L    +N
Sbjct: 295 AFEEMQRQGLKPNIVTYNSLINGLSN 320


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 154/454 (33%), Positives = 230/454 (50%), Gaps = 15/454 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G+ P   TF +LL  +       +    F +  C+   DV +F  L+ G
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-ICRP--DVLTFTTLMNG 191

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  P+ + Y + +DG CK GD   A  L RK+ E+  +  
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL K+G   D    + +MQ  G+ P++ TYNC+I  +C  G+ S   +L 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R+++ NVVTYN LI    KE +  EA  L D+M   GI PN ITYN +IDGFC  
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D A  +F  + + G SP V T+  LI  +  A       +L+ EM  RG+  + VTY
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G +K+A ++F +M +
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 484 TKL-----------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +K+           EP+ + YN++I G   EG    A  L  EM  +G+VP+  +YSS I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  EA  +   M      P+V  +N L
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 229/457 (50%), Gaps = 17/457 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    FN L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C    L  A     +L ++G  P+VV +T+L+ G C +  +  A  LF +I    +
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDV 182

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+T L+ GL + G   +     ++M  NG+ P   TY   +   C  G       
Sbjct: 183 L----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV Y+ +I GLCK+ R  ++  L  +M+  GI PN++TYN +I GF
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A RL  ++     SP+VVTYN LI AF K G    A++L  EM  RGI P+ 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  +ID F + D ++ A +M+ LM   G SPDV+T+  LI G C    + +  +L + 
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L  N V YN +I G+C  G+   AL L  +M   G+ P+I + ++ +  LC +GK
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 237/501 (47%), Gaps = 58/501 (11%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVEL 173
           L  R+S +AL  FHQ+     RP   TF +L+  + +     +         EN   ++ 
Sbjct: 163 LDHRVS-EALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN--GLQP 215

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKML 232
           D  ++G  + G C+ GD   A  +L ++EE+    PNVVIY+++IDG CK+G    +  L
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F ++ + G+     TY  +I G   +G         ++M    +SP++ TYN LI+ +  
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EGK  E  +L+DEM  R +  N +TYN++I G CK+ R+  AE +   M   G SP+V T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  LIDG+C A   D    L +++   G   + VTYN LI  F   G+   A DL ++M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVL 461
             G+ P  VT   L+D    +  ++ A EM+  MQKS           G  PDV TY +L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 462 I-----------------------------------HGLCMKGNMKEASKLFNSMWETKL 486
           I                                    GLC +  + EA+++F SM     
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN V +N +I GYCK G     L L  EM  +G+V +   Y + I    + G    A  
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 547 LLNQMLKLGLKP-SVSLYNIL 566
           +  +M+  G+ P ++++ N+L
Sbjct: 636 IFQEMISSGVYPDTITIRNML 656



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 18/451 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y + +D   K   +  AL    +M + S ++P    +++++  + K          F E 
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM 279

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  ++ ++  +I G C +G  + A  +L ++ E   SPNVV Y +LI+   K G  
Sbjct: 280 QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++   G++    TY  +I G  K        + +  M   G SP ++T+  L
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   ++ +G +L  EM  R +  N VTYNTLI G C    +  A  L  QM  +G+
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            P+++T N L+DG CD G+   A  +F  ++            NG  P V+TYN+LI   
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L  EM  RGI P  +TY+ +ID   +   +++A +M+  M    FSP+V
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  LI+G C  G + +  +LF  M    +  + ++Y  +I+G+ K GN   AL +  E
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           M   G+ P+  +  + +      G W + E+
Sbjct: 640 MISSGVYPDTITIRNML-----TGFWSKEEL 665



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 182/362 (50%), Gaps = 16/362 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++I+A +K     +A   + +ML  G+ P + T+NS++    K    D
Sbjct: 320 SPNVVT----YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 159 KGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
               +F+         DV++F  LI G C A  ++   E+L+++   G   N V Y +LI
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ----- 272
            G C  GD+  A  L +++   G+     T   L+ GL  NG  KD  E ++ MQ     
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 273 ------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
                  NGV P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLC
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K+ R+ EA ++   M     SPNV+T+N LI+G+C AG  D    LF ++   G     +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            Y  LI  F K GN   A D+ +EM   G+ P  +T   ++  F   +++E+A  M   +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675

Query: 447 QK 448
           Q+
Sbjct: 676 QR 677



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 205/450 (45%), Gaps = 23/450 (5%)

Query: 54  LLSKMSSHSHAAAQTLILK-IISGRITSSSFTPRSLLCHLTQ---LFPSSSNPVTKSRLY 109
           LL KM   SH     +I   II G       +    L    Q   +FP   N VT    Y
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP---NIVT----Y 291

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
             +I     S     A     +ML+  + P   T+N+L+   +K   F +    + E   
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 170 K-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           + +  +  ++  +I G C+   L+ A ++   +   G SP+V  +T+LIDG C    I+ 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L  ++   GLVA   TY  LI G    G      +  ++M  +GV P + T N L+ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 289 EYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAERL 337
             C+ GK+ +  ++F  M+  +           V  +V+TYN LICGL  E +  EAE L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M   GI P+ ITY+ +IDG C     D+A ++F  + S   SP+VVT+N LI  + K
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AG      +L  EM  RGI    + Y  LI  F +  ++  A +++  M  SG  PD  T
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
              ++ G   K  ++ A  +   +   +LE
Sbjct: 652 IRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 194/421 (46%), Gaps = 12/421 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K      +   F +M D G+ P   T+N ++     S  +        E 
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  +V ++  LI    + G   +A E+ +++   G  PN + Y S+IDG CK   +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+T LI G        DG E   +M   G+  +  TYN L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +C  G ++    L  +M    V  ++VT NTL+ GLC   ++++A  +   M+ +  
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V+TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+  LI+ + ++  ++   E++  M + G   D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             Y  LI+G    GN+  A  +F  M  + + P+ +    M+ G+  +    RA+ +L +
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 516 M 516
           +
Sbjct: 675 L 675



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 5/275 (1%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +V+ +N L+  + +  R      L  +M+   I  ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F +L   G  P VVT+  L+           A DL  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  +T+T L++   R   + +A  +   M ++G  PD  TYG  + G+C  G+   A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + ++PN V+Y+ +I G CK+G    +  L  EM +KG+ PNI +Y+  IG 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W  A+ LL +ML+  + P+V  YN L  A
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 63/139 (45%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A +++S M +S   P V  +  L+  +           L+  M   ++  +   + +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  +C       AL   G++ + GL P++ ++++ +  LC D +  EA  L +Q+ +  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 556 LKPSVSLYNILYRAKNNIE 574
           +    +L N L R    +E
Sbjct: 182 VLTFTTLMNGLCREGRVVE 200


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 225/396 (56%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +   LI G C  G +++A  +++++ E GF P+ V Y  +++  CK+G+   A  LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           RK+ E  + A+   Y+++I  L K+G   D    + +M++ G+   + TY+ LI   CN+
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK  +G K+  EM  R +  +VVT++ LI    KE ++ EA+ L ++M   GI+P+ ITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LIDGFC      +A ++F+ + S G  P +VTY++LI ++ KA        L RE+  
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P+ +TY  L+  F +S  +  A E++  M   G  P V TYG+L+ GLC  G + +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F  M ++++     +YN++I G C       A  L   +++KG+ P++ +Y+  IG
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G   EA++L  +M + G  P    YNIL RA
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 230/474 (48%), Gaps = 16/474 (3%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K RL   I+D  +     + A+  F  M+ S   P    FN L   V ++  +D    F 
Sbjct: 39  KERLRNGIVDIKV-----NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGF- 92

Query: 165 SENRCK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               CK      +E D+Y+  I+I   C    L  AF VL +  ++G+ P+ + +++L++
Sbjct: 93  ----CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C  G +  A  L  ++ E+       T + LI GL   G   +     ++M   G  P
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TY  +++  C  G  +    LF +M  R +  +VV Y+ +I  LCK+    +A  L 
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           ++M+M GI  +V+TY+ LI G C+ G+ D   ++  ++      P VVT++ LI  F K 
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A +L  EM  RGI P  +TY  LID F + + + +A +M+ LM   G  PD+ TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LI+  C    + +  +LF  +    L PN + YN ++ G+C+ G    A  L  EM  
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +G+ P++ +Y   +  LC +G+  +A  +  +M K  +   + +YNI+     N
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 212/421 (50%), Gaps = 4/421 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDV 175
           LK R+S +AL    +M++ G +P   T+  +L  + KS +      LF       ++  V
Sbjct: 187 LKGRVS-EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER-AKMLFR 234
             + I+I   C+ G  + A  + N++E  G   +VV Y+SLI G C +G  +  AKML  
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            IG   ++    T++ LI    K G   +  E Y +M   G++P   TYN LI  +C E 
Sbjct: 306 MIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + E  ++FD M  +    ++VTY+ LI   CK  RV +  RL  ++   G+ PN ITYN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ GFC +G+ + A  LF ++ S G  PSVVTY +L+      G    A ++  +M++ 
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +T     Y I+I     +  ++ A+ ++  +   G  PDV TY V+I GLC KG++ EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E    P+D  YN++I  +        ++ L+ EM   G   + ++    I +
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604

Query: 535 L 535
           L
Sbjct: 605 L 605



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           + ++ID  +K     +A   +++M+  G+ P + T+NSL+  F  ++C  +   +F    
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               E D+ ++ ILI   C+A  ++    +  ++   G  PN + Y +L+ G C++G + 
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF+++   G+  +  TY +L+ GL  NG      E +EKMQ + ++  +  YN +I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  CN  KV + + LF  +  + V  +VVTYN +I GLCK+  + EA+ L  +MK  G +
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           P+  TYN LI           +  L  ++K  G S    T  ++I   S
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    +    D A   F QM+++G  P   T+N+LL  + ++   D+ +    E R
Sbjct: 80  YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 139

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ D +S+  L+ G C+ G ++ A +V          P+VV Y++LI G CK G ++
Sbjct: 140 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLD 199

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ E        T+T L+ GL K    ++  +  E M+    +P++ TY+ LI
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 259

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V +  ++F  M  R +  NVVTYN+LI G C    V  A  L+++M   G  
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LIDG C  G   +A RLF  +K+   +P V+TY+ LI  F K     MA  L
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 379

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M ++ + P  VT++ L++ +  +  ++ A  +   M  S  SPDVYTY  L+ G C 
Sbjct: 380 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 439

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M EA ++   M +   +PN V Y  +I  +C+ G    A +LL EM   G+ PN+ +
Sbjct: 440 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVIT 499

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y S IG  C  G   EA  +L ++
Sbjct: 500 YRSLIGGFCGTGDLEEARKMLERL 523



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 234/461 (50%), Gaps = 5/461 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +I+   K     +A     +M +SG+ P   T+++++    +    D  +  F    
Sbjct: 45  YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 104

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN C   L  Y+   L+ G C  G +++A+E+L+++ E G  P+   Y +L+ G CK G 
Sbjct: 105 ENGCMPNLVTYN--TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I+ A  +F              Y+ LI GL K G   +  + +EKM+ N   P + T+  
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   ++ E  ++ + M  R    NV+TY++LI GLCK  +V++A+ +  +M + G
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I PNV+TYN LI GFC     D A  L  ++ + G  P ++TYN LI    K G +  A+
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  +M+ +   P  +TY+ LI  F + + ++ A  ++  M K    PDV T+  L+ G 
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G + +A +L   M  +   P+   Y  ++ G+CK G    A R+L  M ++G  PN+
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y++ I   C+ GK   A  LL +M+  G++P+V  Y  L
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 232/459 (50%), Gaps = 1/459 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CK 170
           +ID   K+    +A  YF +M   G  P   T+N L+    K     + +L   E +   
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  +V ++  +I G C    ++ A+++  Q+ E G  PN+V Y +L+ G C+NG ++ A 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ E GL   + +Y  L+ GL K G      + +E        P +  Y+ LI   
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G++ E  KLF++MR      +VVT+  L+ GLCK  R+QEA+++L+ M+    +PNV
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITY+ LIDG C  G+   A  +F ++   G  P+VVTYN LI  F        A  L+ E
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M   G  P  +TY  LID   ++    +A  ++  M+    +PDV TY  LI G C    
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +  A  LF+ M +  + P+ V ++ ++ GYC  G    A RLL EM      P++ +Y+S
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   C+ G+  EA  +L +M K G +P+V  Y  L  A
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 471



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 208/403 (51%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           + E +V ++ I+I G C+A  L +A     ++++ G  PN   Y  LI+G CK   + RA
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            +L +++ E GL     TY+ +I G  +       ++ + +M  NG  P+L TYN L+  
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C  G + E ++L DEMR R +  +  +Y+TL+ GLCK  ++  A ++ +        P+
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+ Y+ LI G C  G  D+A +LF +++ N   P VVT+  L+    K    + A  ++ 
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            ME+R  TP+ +TY+ LID   ++  +  A E++  M   G  P+V TY  LIHG CM  
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A  L   M  T   P+ + YN +I G CK G +  A RL G+M  K   P++ +YS
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             IG  C+  +   A  L + MLK  + P V  ++ L     N
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 404



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 229/448 (51%), Gaps = 5/448 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--E 166
           Y ++I    K+   D+A   F +M ++   P   TF +L+  + K     +        E
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R     +V ++  LI G C+ G +  A EV  ++   G  PNVV Y SLI G C    +
Sbjct: 245 DR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A +L  ++   G +    TY  LI GL K G   +    +  M+    +P + TY+CL
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C   ++     LFD+M  + V  +VVT++TL+ G C    V +AERLL++M  +  
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP+V TY  L+DGFC  G   +A R+  ++   G  P+VVTY  LI AF +AG   +A  
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGL 465
           L+ EM   G+ P+ +TY  LI  F  + D+E+A +M   +++      D++ Y V++ GL
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPN 524
           C  G M  A +L  ++ ++   P   +Y  +I G C+     +A+ +L EM   +   PN
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 603

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQML 552
             +Y + I  L ++G+  EA  L +++L
Sbjct: 604 AEAYEAVIQELAREGRHEEANALADELL 631


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 248/442 (56%)

Query: 125  ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
            A+  F +M   G+   + T+  L+  + K+           + +   + DV+++G++I  
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDA 1094

Query: 185  CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
             C+ G   +A ++ +++   G  P+VV+Y+SL+DG C+ G ++ A   F+++   G+ A 
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154

Query: 245  QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             +TY  LI GL + GL K+   F   M   G SP  +T+  LI   C EGKV E  ++ +
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214

Query: 305  EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
             MRH+    +++TYNTL+ GLC   ++++A +L + +   GI  NV +YN LI+G+C   
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274

Query: 365  ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
            + D+AFR F +++  G  PS VTYN LI A  ++G  + A  L  EM+  G      TY 
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334

Query: 425  ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            +L+D   ++  +E+A +++  ++K+   P++  + +L+ G+C  G ++EA K F+ + + 
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394

Query: 485  KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
             LEP+ + YN++I G C +G    A++LL +M EKG +P+  +++  I  L ++ +  EA
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454

Query: 545  EVLLNQMLKLGLKPSVSLYNIL 566
              LL +M      P  ++ ++L
Sbjct: 1455 IQLLEEMRNRNFSPDEAVTSML 1476



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 238/514 (46%), Gaps = 70/514 (13%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
            + A+  F + L S   P ++TFN LL  V K   +   +  + + N   ++ D+Y+  IL
Sbjct: 928  NDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNIL 987

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I  CC    +   F V     + GF P+ V  T+L+ G      I  A  LF ++ + GL
Sbjct: 988  IHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGL 1047

Query: 242  VATQHTYTVLICG----------------------------------LFKNGLQKDGFEF 267
            +    TY +LI G                                  L K+G+  +  + 
Sbjct: 1048 LGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDM 1107

Query: 268  YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC---- 323
            + +M   G+ P +  Y+ L+   C  G++ E  + F EM  R ++ +V TYN+LI     
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 324  -------------------------------GLCKEMRVQEAERLLDQMKMAGISPNVIT 352
                                           GLCKE +V EA+++L+ M+  G  P+++T
Sbjct: 1168 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILT 1227

Query: 353  YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            YN L++G C  G+ + A +LF  L   G   +V +YN+LI  + K      A     EM 
Sbjct: 1228 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR 1287

Query: 413  ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             +G+ PS VTY  LI +  +S  +  A +++  MQ  G    + TY VL+ GLC  G+++
Sbjct: 1288 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLE 1347

Query: 473  EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            EA  LF S+ +T+ +PN  V+++++ G C+ G    A +   E+++ GL P+  +Y+  I
Sbjct: 1348 EAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILI 1407

Query: 533  GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              LC  G   EA  LL QM + G  P    +N++
Sbjct: 1408 NGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
            Y  ++D   K+   ++A+  F  +  +  +P    F+ LL  + ++   ++ W  F E +
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  +E D  ++ ILI G C  G L++A ++L Q+EE G  P+ + +  +I    K  +I 
Sbjct: 1393 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 1452

Query: 228  RAKMLFRKIGELGLVATQHTYTVLIC 253
             A  L  ++        +   ++L+C
Sbjct: 1453 EAIQLLEEMRNRNFSPDEAVTSMLLC 1478


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 225/396 (56%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +   LI G C  G +++A  +++++ E GF P+ V Y  +++  CK+G+   A  LF
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           RK+ E  + A+   Y+++I  L K+G   D    + +M++ G+   + TY+ LI   CN+
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK  +G K+  EM  R +  +VVT++ LI    KE ++ EA+ L ++M   GI+P+ ITY
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 382

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LIDGFC      +A ++F+ + S G  P +VTY++LI ++ KA        L RE+  
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 442

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P+ +TY  L+  F +S  +  A E++  M   G  P V TYG+L+ GLC  G + +
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 502

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F  M ++++     +YN++I G C       A  L   +++KG+ P++ +Y+  IG
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 562

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G   EA++L  +M + G  P    YNIL RA
Sbjct: 563 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 598



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 230/474 (48%), Gaps = 16/474 (3%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K RL   I+D  +     + A+  F  M+ S   P    FN L   V ++  +D    F 
Sbjct: 68  KERLRNGIVDIKV-----NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGF- 121

Query: 165 SENRCK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               CK      +E D+Y+  I+I   C    L  AF VL +  ++G+ P+ + +++L++
Sbjct: 122 ----CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 177

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C  G +  A  L  ++ E+       T + LI GL   G   +     ++M   G  P
Sbjct: 178 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 237

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TY  +++  C  G  +    LF +M  R +  +VV Y+ +I  LCK+    +A  L 
Sbjct: 238 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 297

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           ++M+M GI  +V+TY+ LI G C+ G+ D   ++  ++      P VVT++ LI  F K 
Sbjct: 298 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 357

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A +L  EM  RGI P  +TY  LID F + + + +A +M+ LM   G  PD+ TY
Sbjct: 358 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 417

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LI+  C    + +  +LF  +    L PN + YN ++ G+C+ G    A  L  EM  
Sbjct: 418 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +G+ P++ +Y   +  LC +G+  +A  +  +M K  +   + +YNI+     N
Sbjct: 478 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 212/421 (50%), Gaps = 4/421 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDV 175
           LK R+S +AL    +M++ G +P   T+  +L  + KS +      LF       ++  V
Sbjct: 216 LKGRVS-EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 274

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER-AKMLFR 234
             + I+I   C+ G  + A  + N++E  G   +VV Y+SLI G C +G  +  AKML  
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 334

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            IG   ++    T++ LI    K G   +  E Y +M   G++P   TYN LI  +C E 
Sbjct: 335 MIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + E  ++FD M  +    ++VTY+ LI   CK  RV +  RL  ++   G+ PN ITYN
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ GFC +G+ + A  LF ++ S G  PSVVTY +L+      G    A ++  +M++ 
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +T     Y I+I     +  ++ A+ ++  +   G  PDV TY V+I GLC KG++ EA
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E    P+D  YN++I  +        ++ L+ EM   G   + ++    I +
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 633

Query: 535 L 535
           L
Sbjct: 634 L 634



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           + ++ID  +K     +A   +++M+  G+ P + T+NSL+  F  ++C  +   +F    
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               E D+ ++ ILI   C+A  ++    +  ++   G  PN + Y +L+ G C++G + 
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 466

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF+++   G+  +  TY +L+ GL  NG      E +EKMQ + ++  +  YN +I
Sbjct: 467 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 526

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  CN  KV + + LF  +  + V  +VVTYN +I GLCK+  + EA+ L  +MK  G +
Sbjct: 527 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 586

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           P+  TYN LI           +  L  ++K  G S    T  ++I   S
Sbjct: 587 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 168/552 (30%), Positives = 282/552 (51%), Gaps = 30/552 (5%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS--GRITSSS 82
           P +A  +FN   R G+Q T  + + +L  L+   SSHS   ++ +    I    +I ++S
Sbjct: 140 PHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNS 199

Query: 83  FTPRSLLCH---LTQLFPSSSNPVTKSR---------LYESIIDAHLKSRLSDQALFYFH 130
           F   ++L H   +   F  +   + K R          Y +I+D   K    ++A     
Sbjct: 200 F---NILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLL 256

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSFGILIKG 184
            M + G+ P   TFN   I V+  C    GWL  + N      +  V  D +++ ++I G
Sbjct: 257 DMKNKGLFPNRTTFN---ILVVGCCRL--GWLKEAANVIELMSQNSVVPDAWTYNVMISG 311

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G + +A  +  ++E +  SP+VV Y +LI+GC ++G  E    L  ++   G+   
Sbjct: 312 FCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPN 371

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY V++    K G   +  +   KM+ +G  P + TYN LI  +C  GK+ E F+L D
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM  + +  + VT NT++  LC+E ++ EA  LL   +  G   + ++Y  LI G+    
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           +  +A RL++++K     PS++TYN +I    + G +  A D + E+ E G+ P E+TY 
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            +I  + +   +EKAF+ ++ M +  F PDV T   L+ GLC +G +++A KLFN+ W +
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNT-WIS 610

Query: 485 KLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           K +  D V YN +I   CKE     A  LL EM EK L P+  +Y++ +G L   G+  +
Sbjct: 611 KGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKD 670

Query: 544 AEVLLNQMLKLG 555
           AE  ++++ + G
Sbjct: 671 AEEFISKIAEKG 682



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 262/498 (52%), Gaps = 13/498 (2%)

Query: 81  SSFTP--RSLLCHLTQLFPS-SSNPVTKSRLYESIID----AHLKSRLSDQALFYFHQML 133
           SSF P  +S   H   L P  ++NPV+   + + ++D    A++      QA   F++M 
Sbjct: 92  SSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMK 151

Query: 134 DSGVRPRSNTFNSLLIFVIK-----SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
             G++P   T N+LL  +++     S    K  +F    +  V+++  SF ILI G C  
Sbjct: 152 RLGMQPTLLTCNTLLNALVRFPSSHSIRLSKA-VFTDFIKIGVKINTNSFNILIHGSCME 210

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
               +A  VL ++ + G  P+ + Y +++DG CK G +  A+ L   +   GL   + T+
Sbjct: 211 NRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTF 270

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            +L+ G  + G  K+     E M  N V P  +TYN +I  +C +G+++E  +L +EM +
Sbjct: 271 NILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN 330

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            +++ +VVTYNTLI G  +    +E  +L+++M+  G+ PN +TYN ++  F   G+ D+
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
             +   +++ +G  P +VTYN LI    K G    A  L+ EM  +G+   +VT   ++ 
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           +  R   +++A ++    ++ G+  D  +YG LI G        +A +L++ M E ++ P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + + YN MI G C+ G + +A+  L E+ E GLVP+  +Y++ I   CQ+G+  +A    
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570

Query: 549 NQMLKLGLKPSVSLYNIL 566
           N+M++   KP V   N L
Sbjct: 571 NKMVEKNFKPDVVTCNTL 588



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 3/314 (0%)

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIH---EYCNEGKVSEGFKLFDEMRHREVACNV 315
           G      + + +M+  G+ P+L T N L++    + +   +     +F +     V  N 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            ++N LI G C E R  EA R+L +M+  G  P+ ITYN ++DG C  G  ++A  L   
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +K+ G  P+  T+N+L+    + G  K A++++  M +  + P   TY ++I  F +   
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A  +   M+    SPDV TY  LI+G    G+ +E  KL   M    ++PN V YN+
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           M+  + K+G      + + +M E G +P+I +Y++ I   C+ GK  EA  L+++M + G
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 556 LKPSVSLYNILYRA 569
           LK      N + RA
Sbjct: 438 LKMDDVTLNTMLRA 451


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 240/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TY+++I G CK+ R+  AE +   M   G SPN+IT+N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G      TYN LI  F   G+   A DL++EM   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+ +MQKS           G  PDV TY +LI 
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 237/527 (44%), Gaps = 83/527 (15%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 182 IK-----------------------------------GCCEAGDLNKAFEVLNQLEEMGF 206
           IK                                   G C    +++A  + +Q+ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG------------ 254
            PNVV +T+L++G C+ G I  A  L  ++ E GL  TQ TY  ++ G            
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 255 ------------------------LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                   L K+G   D    + +MQ  G+ P L+TYN +I  +
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+ S+  +L  EM  R+++ +VVTYN LI    KE +  EAE L D+M   GI PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITY+ +IDGFC     D A  +F  + + G SP+++T+N LI  +  A       +L+ E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G+     TY  LI  F    D+  A ++   M  SG  PD+ T   L+ GLC  G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 471 MKEASKLFNSMWETK-----------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +K+A ++F  M ++K           +EP+   YN++I G   EG    A  L  EM  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+VP+  +YSS I  LC+  +  EA  + + M      P+V  +  L
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ +F  LI G C A  ++   E+L+++ E G   +   Y +LI G    GD+ 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   GL     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           + D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  F 
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A  +   +   G SPN++ + +LIDG C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++ E GLVA   TY  LI G +  G      +  ++M  +G+ P + T + L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V TYN LI GL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F+ + S   SP+VVT+  LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI  + +TY  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ GL  K  +K A  +   +
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y+S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+  LI G        DG E   +M   G+     TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +   G ++    L  EM    +  ++VT +TL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            TY  LI G    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT+N L+           A +L  +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C KG+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++TILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
             LF+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 240/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TY+++I G CK+ R+  AE +   M   G SPN+IT+N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G      TYN LI  F   G+   A DL++EM   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+ +MQKS           G  PDV TY +LI 
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 225/457 (49%), Gaps = 13/457 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C    L  A     ++ ++G  P+VV +T+L+ G C    +  A  LF ++ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T+T L+ GL + G   +     ++M  +G+ P+  TY  ++   C +G       
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV Y+ +I  LCK+ R  +A+ L  +M+  GI P++ TYN +I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A +L  ++     SP VVTYN LI AF K G    A +L  EM  RGI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY+ +ID F + + ++ A  M+ LM   G SP++ T+  LI G C    + +  +L + 
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M ET L  +   YN +I G+   G+   AL LL EM   GL P+I +  + +  LC +GK
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ +F  LI G C A  ++   E+L+++ E G   +   Y +LI G    GD+ 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   GL     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           + D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  F 
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A  +   +   G SPN++ + +LIDG C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++ E GLVA   TY  LI G +  G      +  ++M  +G+ P + T + L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V TYN LI GL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F+ + S   SP+VVT+  LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI  + +TY  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ GL  K  +K A  +   +
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y+S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+  LI G        DG E   +M   G+     TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +   G ++    L  EM    +  ++VT +TL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            TY  LI G    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT+  L+           A +L  +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C KG+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++ ILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
             LF+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/437 (35%), Positives = 219/437 (50%), Gaps = 43/437 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD  +   ++KG C  G + KA E  +++   GFS N V Y  LI+G C+NG +  A  L
Sbjct: 105 LDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNL 164

Query: 233 FRKIGEL------GLVATQHT--YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            R I +       G     +   Y+++I  L +NG   +GFEFY +M  NGV P+ +TY 
Sbjct: 165 LRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYG 224

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI   C  GK  EGF L DEM  R +  +V  +  LI GLCK   + EA  + D+M   
Sbjct: 225 SLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR 284

Query: 345 GISPNVI-----------------------------------TYNKLIDGFCDAGETDKA 369
           G  PN++                                   TYN  I G+C  G    A
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 344

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            R+F+++   G  P++VTYN LI    KAG    A ++V+ M   G+TP  VT  IL+D 
Sbjct: 345 VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDG 404

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +S  +++A  +++ + +SG +PDV++Y +LIHG C    M EA  L   M    L P+
Sbjct: 405 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPH 464

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y+ +I G C+ G    A RLL EM+ KG +P+  +YS  +  L +     EA  L N
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFN 524

Query: 550 QMLKLGLKPSVSLYNIL 566
           QM+K GL+P V  Y I+
Sbjct: 525 QMIKRGLEPDVMCYTIM 541



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 222/456 (48%), Gaps = 34/456 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +ID   ++   D+   ++++M+ +GV P                            
Sbjct: 187 MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE-------------------------- 220

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                   +++G LI+G C  G   + F +++++   G   +V ++T LIDG CKNG + 
Sbjct: 221 --------FTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F ++   G      T T L+ G    G      E ++ +   G    ++TYN  I
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC  G+V +  ++FDEM    V  N+VTYN+LI  LCK   V  A  ++  M  +G++
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++T   L+DG C +   D+A  LFNQL  +G +P V +Y +LI     +     A +L
Sbjct: 393 PDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNL 452

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R+M  + + P  VTY+ LID   RS  +  A+ + + M   G  PD  TY +L+  L  
Sbjct: 453 LRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWK 512

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           K ++ EA  LFN M +  LEP+ + Y +MI GYCK      A+ L  EM+ K LVP+I +
Sbjct: 513 KQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVT 572

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           Y+     + + G        +N +  +   P V  Y
Sbjct: 573 YTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 171/351 (48%), Gaps = 8/351 (2%)

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  +  +F KI + G          ++ GL  NG      EF++++  NG S +  +Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHRE--------VACNVVTYNTLICGLCKEMRVQEAE 335
             LI+  C  G+V+E   L   +   +        V  NVV Y+ +I  LC+   V E  
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
              ++M   G+ PN  TY  LI G C  G+  + F L +++   G   SV  + VLI   
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G    A ++  EM  RG  P+ VT T L+  +    +++ A E++  + + GF  DV
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +TY V IHG C  G +++A ++F+ M    + PN V YN +I   CK G    A  ++  
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M+  GL P+I +    +  LC+  +  +A +L NQ+++ GL P V  Y IL
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 9/223 (4%)

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +NK +       +   A  LFNQ + N   +P ++T  ++I  F   G+   +  +  ++
Sbjct: 39  FNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIFGKI 98

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG     V    ++     +  + KA E +  +  +GFS +  +YG+LI+GLC  G +
Sbjct: 99  LKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRV 158

Query: 472 KEASKLFNSMWETK--------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            EA  L   + + K        ++ N V+Y+++I   C+ G          EM   G+ P
Sbjct: 159 NEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCP 218

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N  +Y S I  LC  GK+ E   L+++M++ GL  SV ++ +L
Sbjct: 219 NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 34/123 (27%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P+  +  Y  ++DA  K +  D+A+F F+QM+  G+ P                      
Sbjct: 496 PLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP---------------------- 533

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                       DV  + I+I G C++  +++A  +  ++      P++V YT L +   
Sbjct: 534 ------------DVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581

Query: 222 KNG 224
           K+G
Sbjct: 582 KSG 584


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 240/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TY+++I G CK+ R+  AE +   M   G SPN+IT+N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G      TYN LI  F   G+   A DL++EM   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+ +MQKS           G  PDV TY +LI 
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 224/457 (49%), Gaps = 13/457 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C    L  A     +L ++G  P+VV + +L+ G C    +  A  LF ++ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T+T L+ GL + G   +     ++M  +G+ P+  TY  ++   C +G       
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV Y+ +I  LCK+ R  +A+ L  +M+  GI P++ TYN +I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A +L  ++     SP VVTYN LI AF K G    A +L  EM  RGI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY+ +ID F + + ++ A  M+ LM   G SP++ T+  LI G C    + +  +L + 
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M ET L  +   YN +I G+   G+   AL LL EM   GL P+I +  + +  LC +GK
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ +F  LI G C A  ++   E+L+++ E G   +   Y +LI G    GD+ 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   GL     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           + D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  F 
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A  +   +   G SPN++ + +LIDG C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++ E GLVA   TY  LI G +  G      +  ++M  +G+ P + T + L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V TYN LI GL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F+ + S   SP+VVT+  LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI  + +TY  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ GL  K  +K A  +   +
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y+S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+  LI G        DG E   +M   G+     TYN L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +   G ++    L  EM    +  ++VT +TL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            TY  LI G    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F +L   G  P VVT+N L+           A +L  +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C KG+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++TILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
             LF+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 272/545 (49%), Gaps = 38/545 (6%)

Query: 23  LPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           L P  A + FNW   + G +H  QS   +L +L+   + +   A    IL I S   + +
Sbjct: 88  LDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVP--NGYLRIAENMRILMIKSTDSSEN 145

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
           +     +L  + +   +    +T  R Y  ++    +  + D+    + +MLD  V P  
Sbjct: 146 ALFVLEMLRSMNRRVDAFKFKLTL-RCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTP-- 202

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
                                           ++++   ++ G C+ G++ +A   ++++
Sbjct: 203 --------------------------------NIFTLNTMVNGYCKLGNVVEAELYVSKI 230

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            + G S +   YTSLI G C+N +++ A  +F  +   G +  + +YT LI G  +    
Sbjct: 231 VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV 290

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +  + + +M  +   P++ TY  +I   C  G+ +E   +F EM  +    NV TY  L
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           IC LC++    +A+++L+ M   G+ P+V+TYN LIDG+C  G +  A  + + ++SN  
Sbjct: 351 ICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNC 410

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           SP+  TYN LI  F +  N   A  L+ +M ER + P+ VTY ILI    +  D+  A++
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           + SLM +SG  PD +TY V I  LC +G ++EA  LF S+ E  ++ N+V+Y+ +I GYC
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYC 530

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G       LL +M   G VPN  +Y+S I   C++  + EA +L++ M+K  ++P+  
Sbjct: 531 KVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAAD 590

Query: 562 LYNIL 566
            Y IL
Sbjct: 591 TYTIL 595



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 216/462 (46%), Gaps = 40/462 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y S+I  + +++  D A   F  M + G      ++ +L+    ++   D+    FS   
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH 301

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E+ C   +  Y+  ++I   C+ G   +A  +  ++ E    PNV  YT LI   C++ +
Sbjct: 302 EDNCWPTVRTYT--VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + AK +   + E GL+ +  TY  LI G  K GL     E    M+ N  SP+  TYN 
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG--------------------- 324
           LI  +C    + +   L  +M  R++  NVVTYN LI G                     
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 325 --------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
                         LCK   V+EA  L + +K  GI  N + Y+ LIDG+C  G+     
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L +++ S G  P+ +TYN LI  + K  N K A  LV  M +R I P+  TYTILID+ 
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           ++ D+ ++A +M+  M  +G  PDV+ Y   IH  C  G +K+A  L   M    + P+ 
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           ++Y + I  Y + G+   A  +L  M+E G  P+  +YS  I
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 196/430 (45%), Gaps = 7/430 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N    +R Y  +I    + +   +A+   H+ML+  ++P   T+N L+    K     
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466

Query: 159 KGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             +   S  N   +  D +++ + I   C+ G + +A  +   L+E G   N VIY++LI
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK G +   + L  K+   G V    TY  LI G  K    K+     + M    + 
Sbjct: 527 DGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE 586

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  LI     + +  +   +FD+M       +V  Y   I   C   R+++AE L
Sbjct: 587 PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVL 646

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           + +M   GI P+ + Y   ID +   G  D AF +  ++   G  PS  TY+ LI+  S 
Sbjct: 647 ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSN 706

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A   +++S         G+  ++ +      +  R  D E   +++  M + G +P+  T
Sbjct: 707 AKPKEVSSSSELSDLSSGVASNDFS------NCWRRVDYEFTLDLFGKMAEHGCAPNANT 760

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG  I GLC  G ++ A +LF+ M E    PN+ +YN ++   C+ G    A+R L  M 
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820

Query: 518 EKGLVPNIAS 527
           E   +P++ S
Sbjct: 821 ENRHLPHLDS 830



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 210/524 (40%), Gaps = 100/524 (19%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++ID + K  LS  AL     M  +   P + T+N L++   +  +  K   L     
Sbjct: 382 YNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKML 441

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K++ +V ++ ILI G C+ GDL  A+++L+ + E G  P+   Y+  ID  CK G +E
Sbjct: 442 ERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVE 501

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  + E G+ A +  Y+ LI G  K G   DG    +KM   G  P+  TYN LI
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVAC---------------------------------- 313
             YC E    E   L D M  R++                                    
Sbjct: 562 DGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH 621

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI-------------------------- 346
            +V  Y   I   C   R+++AE L+ +M   GI                          
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681

Query: 347 ---------SPNVITYNKLIDGFCDAG---------------------------ETDKAF 370
                     P+  TY+ LI    +A                              D  F
Sbjct: 682 LKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEF 741

Query: 371 RL--FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
            L  F ++  +G +P+  TY   I    K G  ++A  L   M+E+G +P+E  Y  L+ 
Sbjct: 742 TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLG 801

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +     +A     +M ++   P + +  +L+ GL  +GN ++A ++F S  + +   
Sbjct: 802 CSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNY 861

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +++V+ ++I G  K+G S +   L G M  +G   +  +YS  I
Sbjct: 862 DEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLI 905



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 174/417 (41%), Gaps = 32/417 (7%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSR--LYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            +   R L+     LF S      K+   +Y ++ID + K        F   +ML +G  
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P S T+NSL+    K  +F +  L      +  +E    ++ ILI    +  + ++A ++
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            +Q+   G  P+V IYT+ I   C +G ++ A++L  K+   G++     YT+ I    +
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE----------------GKVSEGF- 300
            G     F   ++M   G  PS YTY+CLI    N                 G  S  F 
Sbjct: 672 FGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS 731

Query: 301 ------------KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                        LF +M     A N  TY   I GLCK   ++ A RL D MK  G SP
Sbjct: 732 NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N   YN L+   C  G   +A R  + +  N   P + +  +L+      GN + A  + 
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
               +      E+ + +LID  ++    +K  +++ +M+  G      TY +LI G 
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 132/384 (34%), Gaps = 75/384 (19%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R LL KM S            +I G     +F    LL  +  +      P   +  Y  
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI--MIKRDIEPAADT--YTI 594

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFFSEN 167
           +ID  LK    DQA   F QML +G  P    + +   F+   CS     D   L    N
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA---FIHAYCSHGRLKDAEVLICKMN 651

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI---------- 217
              +  D   + + I      G ++ AF +L ++ E+G  P+   Y+ LI          
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711

Query: 218 -------------------DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                                C +  D E    LF K+ E G     +TY   I GL K 
Sbjct: 712 VSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKV 771

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD---EMRH------- 308
           G  +     ++ M+  G SP+   YN L+   C  G   E  +  D   E RH       
Sbjct: 772 GCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSC 831

Query: 309 ----------------REVACNVV---------TYNTLICGLCKEMRVQEAERLLDQMKM 343
                           + V C+ +          +  LI GL K+    +   L   M+ 
Sbjct: 832 KLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMET 891

Query: 344 AGISPNVITYNKLIDGFCDAGETD 367
            G   +  TY+ LI+GF    E D
Sbjct: 892 QGCQIHPKTYSMLIEGFDGIQEID 915


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 157/471 (33%), Positives = 240/471 (50%), Gaps = 36/471 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           +H+ML  GV+P    +N+++  + K  +  D   +       ++  D +++  +I G C 
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             DL+ A +V NQ+ + G  PN V Y++LI+G C +G +  A  L R++   G++ T HT
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            T  I  L   G  +D +  +  M+  G  P++YTY  LI   C  G +     LF  M 
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N VTYN LI  L +  R++ A  +L+ M   G+  N++TYN++I G+C  G+  
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK 612

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------------------------- 400
           KA  + N +   G S ++VTYN +I+ +  +GN                           
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 401 ------SKMAS--DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                 SKM S   L  EM + G+ P+EVTYT LID + + + ++ A  +   M++SG  
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY VLIHGL  + N   A +L   M E  + PN V Y  MI G CK G++  AL +
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             +M E+G +PN+ +YSS I  L Q+GK  EAE L  ++ + GL P    Y
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 233/490 (47%), Gaps = 19/490 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++F S  +P T +  Y S+I  H +    D AL  F+QM   G  P + T+++L+  +
Sbjct: 408 MKKVFESEMSPDTFT--YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 465

Query: 152 IKSCSFDKGWLFFSENRCKVELDVYSFGIL---------IKGCCEAGDLNKAFEVLNQLE 202
             S   ++ +    E        +   GIL         I   C+ G    A+ +   ++
Sbjct: 466 CDSGRVNEAFDLIRE--------MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  PNV  YT+LI G C +G ++ A  LF ++   G+     TY  LI  L +N   K
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             F     M  NG+  ++ TYN +I  YC  G   +   + + M  R  + N+VTYNT+I
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 637

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C       A R+LD M+  G  P+  +Y +LI GFC   + + AF LFN++  +G  
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+ VTY  LI  + K      A+ L+  M+  G  P+  TY +LI    + ++   A E+
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             +M + G  P+V TY  +I GLC  G+   A ++FN M E    PN + Y+ +I    +
Sbjct: 758 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  L  E+   GL+P+  +Y   I      GK   A   L +M+K G +P++  
Sbjct: 818 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877

Query: 563 YNILYRAKNN 572
           Y +L +   N
Sbjct: 878 YGVLIKGLKN 887



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 231/460 (50%), Gaps = 14/460 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-EN 167
           Y ++I     S L   A+  FH+M   GV P + T+N+L+  ++++      ++  +   
Sbjct: 528 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 587

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  ++ ++  +IKG C  GD  KA  V+N + + G S N+V Y ++I G C +G+  
Sbjct: 588 RNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 647

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   + + G    + +YT LICG  K    +  F  + +M  +G+ P+  TY  LI
Sbjct: 648 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC + K+     L + M+      NV TYN LI GL K+     AE L   M   GI 
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  +IDG C  G T  A  +FN++   G  P+++TY+ LIRA  + G  + A +L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E+E  G+ P E+TY  +I++++ S  +E AF     M K+G  P ++TYGVLI GL  
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-- 885

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-GEMNEKGLVPNIA 526
           K     A +   ++        DVV N   FGY  +     A+ ++  ++ E     ++ 
Sbjct: 886 KNEYLLADQRLAAL-------PDVVPNCS-FGY--QTTDQDAVSVMSAKLAELDPGLSVQ 935

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++ +  L   G+W EA  LL  M+  GL P    YN L
Sbjct: 936 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 975



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 192/459 (41%), Gaps = 35/459 (7%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            S+N VT    Y +II  +  S  +  AL     M D G +P   ++  L+    K    +
Sbjct: 627  SANLVT----YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682

Query: 159  KGWLFFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
              +  F+E      C  E+   ++  LI G C+   L+ A  +L  ++  G  PNV  Y 
Sbjct: 683  SAFGLFNEMVDDGLCPNEV---TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 215  SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
             LI G  K  +   A+ L + + E G+     TYT +I GL KNG      E + KM   
Sbjct: 740  VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 275  GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
            G  P+L TY+ LI     EGKV E   LF E+    +  + +TY  +I       +V+ A
Sbjct: 800  GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 335  ERLLDQMKMAGISPNVITYNKLIDGF--------------------CDAG----ETDKAF 370
               L +M  AG  P + TY  LI G                     C  G    + D   
Sbjct: 860  FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 919

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
             +  +L       SV   N L+   S AG    A++L+  M  +G+ P +  Y  L+ S 
Sbjct: 920  VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 979

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +R  +++ A  ++  M   G    +  Y  LI  LC     KEA   F +M      P+D
Sbjct: 980  LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 1039

Query: 491  VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            VV  ++I G  ++G     +  L  M  +  +P+   Y+
Sbjct: 1040 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 1078



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 147/383 (38%), Gaps = 70/383 (18%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y ++ID + K    D A      M  SG RP   T+N L+  + K  +F       +E  
Sbjct: 703  YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG-----AEEL 757

Query: 169  CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            CKV ++      V ++  +I G C+ G  + A E+ N++ E G  PN++ Y+SLI    +
Sbjct: 758  CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817

Query: 223  NGDIERAKMLFRKIGELGLVA-----------------------------------TQHT 247
             G +E A+ LF ++   GL+                                    T  T
Sbjct: 818  EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877

Query: 248  YTVLICGLFKNGLQKD---------------GFEFYEK-------MQLNGVSP--SLYTY 283
            Y VLI GL    L  D               G++  ++        +L  + P  S+   
Sbjct: 878  YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
            N L+      G+  E  +L   M  + +  +   YN+L+C L +   V  A  +   M  
Sbjct: 938  NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             G   ++  Y +LI   C      +A   F  +     +P  V   VLI    + G   +
Sbjct: 998  QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 1057

Query: 404  ASDLVREMEERGITPSEVTYTIL 426
              + +  ME R   PS   YTIL
Sbjct: 1058 CMEFLHIMETRRYMPSFHIYTIL 1080



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 35/353 (9%)

Query: 73   IISGRITSSSFTPRSLLCHLT---QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
            +I G    ++F+    LC +     +FP   N VT    Y ++ID   K+  +  AL  F
Sbjct: 741  LIHGLTKQNNFSGAEELCKVMIEEGIFP---NVVT----YTAMIDGLCKNGSTSLALEMF 793

Query: 130  HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
            ++M++ G  P   T++SL+  + +    ++    F+E  R  +  D  ++  +I+    +
Sbjct: 794  NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 853

Query: 189  GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC--------------------CKNG---- 224
            G +  AF  L ++ + G  P +  Y  LI G                     C  G    
Sbjct: 854  GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 913

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            D +   ++  K+ EL    +      L+  L   G   +  E    M   G+ P    YN
Sbjct: 914  DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             L+        V     +F  M  +    ++  Y  LIC LC+  R +EA    + M M 
Sbjct: 974  SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 1033

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              +P+ +    LIDG    G  D      + +++    PS   Y +L R  SK
Sbjct: 1034 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/535 (31%), Positives = 268/535 (50%), Gaps = 26/535 (4%)

Query: 36  SRQGLQHTPQ-----SISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           SR+ L  +PQ       S    +  +  +S + AAA  L    +S      + +P ++L 
Sbjct: 25  SRKTLLRSPQFHMAPPTSAAAAVAAAARASPTSAAALALFKSALSA---DKALSPLAVLP 81

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           HL    PSS        L   ++ A    R    +L  + +M    +   + + + LL  
Sbjct: 82  HLDG-APSS--------LPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSA 132

Query: 151 VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           +  + +F    LF    R ++ L   +F I+++  C AG   +A E+L Q+      PN 
Sbjct: 133 LPSAPAF---ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNA 185

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA-TQHTYTVLICGLFKNGLQKDGFEFYE 269
           V Y ++I G C  G ++ A  + R++ E G +A  Q+TY  +I G  K G   +  + ++
Sbjct: 186 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 245

Query: 270 KMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +M   G V P    YN LI  YC++GK+       D M  R VA  V TYN L+  L  +
Sbjct: 246 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 305

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R  EA  L+++M   G++ +V TYN LI+G C  G   KA  +F  +   G   +VVTY
Sbjct: 306 GRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 365

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             LI A SK G  +    L  E   RGI P  V Y  LI+S   S ++++AFE+   M+K
Sbjct: 366 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 425

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              +PD  TY  L+ GLC+ G + EA KL + M +  ++P+ V YN +I GY  +G+   
Sbjct: 426 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           ALR+  EM  KG  P + +Y++ I  LC++G+  +AE ++ +M++ G+ P  S Y
Sbjct: 486 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 540



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  + Y++G +
Sbjct: 172 RALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 227

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +++A +V +++   G   P  V+Y +LI G C  G ++ A +   ++ E G
Sbjct: 228 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 287

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +G   + +E  E+M   G++  ++TYN LI+ +C EG V +  
Sbjct: 288 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKAL 347

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+ M  R V   VVTY +LI  L K+ +VQE ++L D+    GI P+++ YN LI+  
Sbjct: 348 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 407

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  D+AF +  +++    +P  VTYN L+R     G    A  L+ EM +RGI P  
Sbjct: 408 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 467

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI  +    D++ A  + + M   GF+P + TY  LI GLC  G   +A  +   
Sbjct: 468 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M E  + P+D  Y  +I G   E
Sbjct: 528 MVENGITPDDSTYISLIEGLTTE 550



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 223/444 (50%), Gaps = 25/444 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LP   AF+LF    R  L     + +I+LR L            L +M  
Sbjct: 123 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 182

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    S GR+ ++      ++  + +    + N  T    Y ++I    K 
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAA----LDIMREMRERGGIAPNQYT----YGTVISGWCKV 234

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              D+A+  F +ML  G V+P +  +N+L+         D   L+      + V + V +
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +L+      G   +A+E++ ++   G + +V  Y  LI+G CK G++++A  +F  + 
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L K G  ++  + +++    G+ P L  YN LI+ +   G + 
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +A + VTYNTL+ GLC   RV EA +L+D+M   GI P+++TYN LI
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A R+ N++ + G +P+++TYN LI+   K G    A ++V+EM E GIT
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534

Query: 418 PSEVTYTILIDSFVRSDDMEKAFE 441
           P + TY  LI+     D  E+A +
Sbjct: 535 PDDSTYISLIEGLTTED--ERAID 556



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 181/348 (52%), Gaps = 9/348 (2%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF  +  L L     T+ +++  L   G      E   +M      P+  TYN +I  +C
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 196

Query: 292 NEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPN 349
           + G+V     +  EMR R  +A N  TY T+I G CK  RV EA ++ D+M   G + P 
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + YN LI G+CD G+ D A    +++   G + +V TYN+L+ A    G    A +LV 
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +G+     TY ILI+   +  +++KA E++  M + G    V TY  LI+ L  KG
Sbjct: 317 EMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 376

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++E  KLF+      + P+ V+YN +I  +   GN  RA  ++GEM +K + P+  +Y+
Sbjct: 377 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 436

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           + +  LC  G+  EA  L+++M K G++P +  YN L   Y  K +++
Sbjct: 437 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/545 (30%), Positives = 273/545 (50%), Gaps = 27/545 (4%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A   F WA RQ G + +  + ++IL +L       S   A  ++ K++S ++     
Sbjct: 61  PAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRS---AYCVMEKVVSVKM----- 112

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                            N V    + + ++  + K  + ++ L  F++M+  G+ P    
Sbjct: 113 ----------------ENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKN 156

Query: 144 FNSLL-IFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            N +L +   +  S D     ++    C +   V ++  ++   C+ G + +A ++L Q+
Sbjct: 157 CNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQM 216

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           ++MG  PN V Y  L++G   +G++E+AK L +++  LGL  + +TY  LI G  + G  
Sbjct: 217 QKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQL 276

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +     E+M   G  P+L TYN +++  C  G+VS+  KL D M ++ +  ++V+YNTL
Sbjct: 277 DEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I G  +   + EA  L  +++  G+ P+V+TYN LIDG C  G+ D A RL +++  +G 
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P V T+ +L+R F K GN  MA +L  EM  RG+ P    Y   I   ++  D  KAF 
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           M   M   GF PD+ TY V I GL   GN+KEAS+L   M    L P+ V Y  +I  + 
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
             G+  +A  +  EM  KG+ P++ +Y+  I      G+   A +   +M + G+ P+V 
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 576

Query: 562 LYNIL 566
            YN L
Sbjct: 577 TYNAL 581



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 210/407 (51%), Gaps = 15/407 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y+ +I  + +    D+A     +ML  G  P   T+N+++  + K       W   S+ R
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK-------WGRVSDAR 315

Query: 169 CKVEL--------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             +++        D+ S+  LI G    G++ +AF +  +L   G  P+VV Y +LIDG 
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ GD++ A  L  ++ + G      T+T+L+ G  K G      E +++M   G+ P  
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           + Y   I      G  S+ F + +EM  R    +++TYN  I GL K   ++EA  L+ +
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G+ P+ +TY  +I     AG   KA  +F ++ S G  PSVVTY VLI +++  G 
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            K+A     EM E+G+ P+ +TY  LI+   +   M++A++ ++ MQ  G SP+ YTY +
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           LI+  C  G+ +EA +L+  M + +++P+   ++ ++    K+  S+
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSH 662



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 7/306 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   +    D A+    +M+  G  P   TF  L+    K  +       F E  
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR  ++ D +++   I G  + GD +KAF +  ++   GF P+++ Y   IDG  K G++
Sbjct: 428 NR-GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L +K+   GLV    TYT +I      G  +     + +M   G+ PS+ TY  L
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH Y   G++      F EM  + V  NV+TYN LI GLCK  ++ +A +   +M+  GI
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN  TY  LI+  C+ G   +A RL+  +      P   T++ L++      N    S 
Sbjct: 607 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL----NKDYKSH 662

Query: 407 LVREME 412
           +VR +E
Sbjct: 663 VVRHLE 668


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/404 (35%), Positives = 219/404 (54%), Gaps = 6/404 (1%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           LF    R ++ L   +F I+++  C AG   +A E+L Q+      PN V Y ++I G C
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 83

Query: 222 KNGDIERAKMLFRKIGELGLVA-TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPS 279
             G ++ A  + R++ E G +A  Q+TY  +I G  K G   +  + +++M   G V P 
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
              YN LI  YC++GK+       D M  R VA  V TYN L+  L  + R  EA  L++
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G++P+V TYN LI+G C  G   KA  +F  +   G   +VVTY  LI A SK G
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             +    L  E   RGI P  V Y  LI+S   S ++++AFE+   M+K   +PD  TY 
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ GLC+ G + EA KL + M +  ++P+ V YN +I GY  +G+   ALR+  EM  K
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 383

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G  P + +Y++ I  LC++G+  +AE ++ +M++ G+ P  S Y
Sbjct: 384 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 199/383 (51%), Gaps = 7/383 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  + Y++G +
Sbjct: 59  RALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 114

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +++A +V +++   G   P  V+Y +LI G C  G ++ A +   ++ E G
Sbjct: 115 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 174

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +G   + +E  E+M   G++P ++TYN LI+ +C EG V +  
Sbjct: 175 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 234

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+ M  R V   VVTY +LI  L K+ +VQE ++L D+    GI P+++ YN LI+  
Sbjct: 235 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 294

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  D+AF +  +++    +P  VTYN L+R     G    A  L+ EM +RGI P  
Sbjct: 295 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 354

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI  +    D++ A  + + M   GF+P + TY  LI GLC  G   +A  +   
Sbjct: 355 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M E  + P+D  Y  +I G   E
Sbjct: 415 MVENGITPDDSTYISLIEGLTTE 437



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 23/438 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LP   AF+LF    R  L     + +I+LR L            L +M  
Sbjct: 10  TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 69

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    S GR+ ++      ++  + +    + N  T    Y ++I    K 
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAAL----DIMREMRERGGIAPNQYT----YGTVISGWCKV 121

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              D+A+  F +ML  G V+P +  +N+L+         D   L+      + V + V +
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +L+      G   +A+E++ ++   G +P+V  Y  LI+G CK G++++A  +F  + 
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L K G  ++  + +++    G+ P L  YN LI+ +   G + 
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +A + VTYNTL+ GLC   RV EA +L+D+M   GI P+++TYN LI
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A R+ N++ + G +P+++TYN LI+   K G    A ++V+EM E GIT
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421

Query: 418 PSEVTYTILIDSFVRSDD 435
           P + TY  LI+     D+
Sbjct: 422 PDDSTYISLIEGLTTEDE 439



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 6/337 (1%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF  +  L L     T+ +++  L   G      E   +M      P+  TYN +I  +C
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 83

Query: 292 NEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPN 349
           + G+V     +  EMR R  +A N  TY T+I G CK  RV EA ++ D+M   G + P 
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + YN LI G+CD G+ D A    +++   G + +V TYN+L+ A    G    A +LV 
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +G+ P   TY ILI+   +  +++KA E++  M + G    V TY  LI+ L  KG
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++E  KLF+      + P+ V+YN +I  +   GN  RA  ++GEM +K + P+  +Y+
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +  LC  G+  EA  L+++M K G++P +  YN L
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 360



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 33/126 (26%)

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-------------------- 513
           A  LF  M+  +L      +N+M+   C  G   RAL LL                    
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCS 84

Query: 514 -----------GEMNEK-GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSV 560
                       EM E+ G+ PN  +Y + I   C+ G+  EA  + ++ML  G +KP  
Sbjct: 85  RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144

Query: 561 SLYNIL 566
            +YN L
Sbjct: 145 VMYNAL 150


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 268/537 (49%), Gaps = 17/537 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           K F  F +         P S S I  +  S +S+  H     +    +  R+   + TP 
Sbjct: 16  KKFHSFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPP 75

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS--DQALFYF---HQMLDSGVRPRS 141
           ++       F      + KS+ Y +++    +      +  LF+F   HQ++  G  P +
Sbjct: 76  AIE------FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLM--GYHPNT 127

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKV--ELDVYSFGILIKGCCEAGDLNKAFEVLN 199
            TF +L+  +       +  L F +N   +  +LD   +G LI G C+ G+   A ++L 
Sbjct: 128 ITFTTLIKGLCLKGQIHQA-LLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 186

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           +++     PNVV+Y+++IDG CK+  +  A  L+ ++   G+     TY+ LI G F  G
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             KD  + + KM L  + P +YT+N L+  +C +GK+ EG  +F  M  + +  NVVTY 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           +L+ G C    V +A+ +L  M   G++P++ +YN LIDGFC   + D+A  LF ++   
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P VVTYN LI    K G    A  LV EM +RG+ P  +TY+ ++D+  ++  ++KA
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             + + ++  G  P++YTY +LI GLC  G +++A  +F  +           Y +MI G
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +C +G    AL LL +M +   +P+  +Y   I  L    +  +AE  L +M+  GL
Sbjct: 487 FCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK-LREMITRGL 542



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 195/393 (49%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LIKG C  G +++A    + +  MGF  + V Y +LI G CK G+   A  L R++
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +      Y+ +I G+ K+    D F+ Y +M   G+SP++ TY+ LI  +   G++
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +   LF++M    +  +V T+N L+ G CK+ +++E + +   M   GI PNV+TY  L
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG+C   E +KA  +   +   G +P + +YN+LI  F K      A +L +EM  + I
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTY  LID   +   +  A ++   M   G  PD+ TY  ++  LC    + +A  
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   + +  + PN   Y ++I G CK G    A  +  ++  KG    + +Y+  I   C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             G + EA  LL++M      P    Y I+ R+
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS 521



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 190/363 (52%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           MG+ PN + +T+LI G C  G I +A +    +  +G    Q  Y  LI GL K G  + 
Sbjct: 121 MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             +   ++  N V P++  Y+ +I   C +  V++ F L+ EM  + ++ NVVTY+ LI 
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G     ++++A  L ++M +  I P+V T+N L+DGFC  G+  +   +F  +   G  P
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  L+  +        A  ++  M +RG+ P   +Y ILID F +   +++A  ++
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M      PDV TY  LI GLC  G +  A KL + M +  + P+ + Y+ ++   CK 
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               +A+ LL ++ ++G+ PN+ +Y+  I  LC+ G+  +A  +   +L  G   +V+ Y
Sbjct: 421 HQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTY 480

Query: 564 NIL 566
            ++
Sbjct: 481 TVM 483



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 16/377 (4%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGE-------------LG-LVATQHTYTVLICG 254
           N + Y+S+      N D+  A  LF ++               LG LV ++H +TVL   
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 255 --LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             +   G+    F F    QL G  P+  T+  LI   C +G++ +     D +      
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + V Y TLI GLCK    + A  LL ++    + PNV+ Y+ +IDG C     + AF L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           ++++ S G SP+VVTY+ LI  F   G  K A DL  +M    I P   T+ IL+D F +
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              M++   ++++M K G  P+V TY  L+ G C+   + +A  +  +M +  + P+   
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I G+CK      A+ L  EM+ K ++P++ +Y+S I  LC+ GK   A  L+++M 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 553 KLGLKPSVSLYNILYRA 569
             G+ P +  Y+ +  A
Sbjct: 400 DRGVPPDIITYSSILDA 416


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 136/398 (34%), Positives = 222/398 (55%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LI G C  G ++KA  +++++ E G  P++V Y S+++G C++GD   A  
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           + RK+ E  + A   TY+ +I  L ++G        +++M+  G+  S+ TYN L+   C
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK ++G  L  +M  RE+  NV+T+N L+    KE ++QEA  L  +M   GISPN+I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L+DG+C      +A  + + +  N  SP +VT+  LI+ +           + R +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+  + VTY+IL+  F +S  ++ A E++  M   G  PDV TYG+L+ GLC  G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++F  + ++K++   V+Y  +I G CK G    A  L   +  KG+ PN+ +Y+  
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+ G   EA +LL +M + G  P+   YN L RA
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 232/429 (54%), Gaps = 5/429 (1%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLN 192
           G  P + TFN+L+  +       K  +      EN C  + D+ ++  ++ G C +GD +
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC--QPDMVTYNSIVNGICRSGDTS 210

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            AF++L ++EE     +V  Y+++ID  C++G I+ A  LF+++   G+ ++  TY  L+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G   DG    + M    + P++ T+N L+  +  EGK+ E  +L+ EM  R ++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N++TYNTL+ G C + R+ EA  +LD M     SP+++T+  LI G+C     D   ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F  +   G   + VTY++L++ F ++G  K+A +L +EM   G+ P  +TY IL+D    
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  +EKA E++  +QKS     +  Y  +I G+C  G +++A  LF S+    ++PN + 
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y +MI G CK+G+   A  LL +M E G  PN  +Y++ I    +DG    +  L+ +M 
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

Query: 553 KLGLKPSVS 561
             G     S
Sbjct: 571 SCGFSADAS 579



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 217/416 (52%), Gaps = 7/416 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS----CSFDKGWLFFSENRCKVELDVYSFG 179
           +A+    +M+++G +P   T+NS++  + +S     +FD   L   E R  V+ DV+++ 
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD--MLRKMEER-NVKADVFTYS 232

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            +I   C  G ++ A  +  ++E  G   +VV Y SL+ G CK G      +L + +   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +V    T+ VL+    K G  ++  E Y++M   G+SP++ TYN L+  YC + ++SE 
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             + D M   + + ++VT+ +LI G C   RV +  ++   +   G+  N +TY+ L+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           FC +G+   A  LF ++ S+G  P V+TY +L+      G  + A ++  ++++  +   
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V YT +I+   +   +E A+ ++  +   G  P+V TY V+I GLC KG++ EA+ L  
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            M E    PND  YN +I  + ++G+   + +L+ EM   G   + +S    I +L
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 37/368 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID+  +    D A+  F +M   G++    T+NSL+  + K+  ++ G L   +  
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290

Query: 169 CK----------VELDVY--------------------------SFGILIKGCCEAGDLN 192
            +          V LDV+                          ++  L+ G C    L+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  +L+ +     SP++V +TSLI G C    ++    +FR I + GLVA   TY++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  ++G  K   E +++M  +GV P + TY  L+   C+ GK+ +  ++F++++  ++ 
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             +V Y T+I G+CK  +V++A  L   +   G+ PNV+TY  +I G C  G   +A  L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             +++ +G +P+  TYN LIRA  + G+   ++ L+ EM+  G +    +  ++ID  + 
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL- 589

Query: 433 SDDMEKAF 440
           S +++K+F
Sbjct: 590 SGELDKSF 597


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 274/568 (48%), Gaps = 63/568 (11%)

Query: 24  PPLKAFSLFNWASRQGLQHTPQSISIILRL--------LLSKMSSHSHAAAQTLILKII- 74
           PP +A        R+G       ++ +LRL        LLS + S   A +   +L  + 
Sbjct: 30  PPRRAAPFLAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALC 89

Query: 75  --SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
              G + ++ F        L ++    + P   S  Y +++ A    R + QA+     M
Sbjct: 90  RQGGCLDAALF--------LLRVMAHETRPTAVS--YTTLMRALCAERRTGQAVGLLRDM 139

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
             SGVRP                                  DV ++G LI+G C+A D++
Sbjct: 140 QASGVRP----------------------------------DVVTYGTLIRGLCDAADVD 165

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA E+L ++ E G  PNVV+Y+ L+ G CK G  E    +F ++   G+      YT LI
Sbjct: 166 KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLI 225

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G  K   +  +KM   G+ P++ TYN LI+  C EG V E   L + M  + VA
Sbjct: 226 DSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVA 285

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPNVITYNKLIDGFCDAGETDKAF 370
            + VTYNTLI GL   + + EA  LL++M      + PNV+T+N +I G C  G   +AF
Sbjct: 286 LDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAF 345

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++ + +  NG + ++VT+N+LI    +    K A +L+ EM   G+ P   TY+ILI+ F
Sbjct: 346 QVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGF 405

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPN 489
            +   +++A  + S M++ G  P++  Y  L+  LC +G M++A   F+ M +  KL+  
Sbjct: 406 CKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDV- 464

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y+ MI G C+  +   A   L  M ++GL+P+  +YS  I +    G    AE +L 
Sbjct: 465 -VAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK 523

Query: 550 QMLKLGLKPSVSLYNIL---YRAKNNIE 574
           QM   G  P V++++ L   Y AK + E
Sbjct: 524 QMTASGFVPDVAVFDSLIKGYGAKGDTE 551



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 177/372 (47%), Gaps = 19/372 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I++  K     +A+   + ML+ GV   + T+N+L+  +      D+      E  
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                VE +V +F  +I G C+ G + +AF+V + + E G + N+V +  LI G  +   
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +++A  L  ++   GL     TY++LI G  K            KM+ +G+ P L  Y  
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C +G + +    FDEM H+    +VV Y+T+I G C+    + AE  L  M   G
Sbjct: 436 LLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TY+ LI+ F ++G+   A R+  Q+ ++G  P V  ++ LI+ +   G+++   
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGV---- 460
           +L+REM  + I       + +    V ++      E  +L+Q   GF  +V    V    
Sbjct: 555 ELIREMTAKDIALDSKIISTIYTCLVANN------EGKALLQSVPGFDTEVSKGAVISSH 608

Query: 461 ----LIHGLCMK 468
               ++H LC K
Sbjct: 609 ELTNMLHKLCNK 620



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 6/202 (2%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +SS     S  Y  +I+   K    D+A     +M   G+ P    +  LL  + +    
Sbjct: 387 ASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMM 446

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           ++   FF E     +LDV ++  +I G C   D   A E L  + + G  P+ V Y+ LI
Sbjct: 447 EQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLI 506

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV- 276
           +    +GD+  A+ + +++   G V     +  LI G    G  +   E   +M    + 
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566

Query: 277 --SPSLYT-YNCLIHEYCNEGK 295
             S  + T Y CL+    NEGK
Sbjct: 567 LDSKIISTIYTCLVAN--NEGK 586


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 222/398 (55%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LIKG    G +++A  +++++ E G  P+VV Y S+++G C++GD   A  
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L RK+ E  + A   TY+ +I  L ++G        +++M+  G+  S+ TYN L+   C
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK ++G  L  +M  RE+  NV+T+N L+    KE ++QEA  L  +M   GISPN+I
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L+DG+C      +A  + + +  N  SP +VT+  LI+ +           + R +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+  + VTY+IL+  F +S  ++ A E++  M   G  PDV TYG+L+ GLC  G +
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++F  + ++K++   V+Y  +I G CK G    A  L   +  KG+ PN+ +Y+  
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+ G   EA +LL +M + G  P+   YN L RA
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 234/434 (53%), Gaps = 5/434 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCE 187
           +++  G  P + TFN+L+  +       +  +      EN C  + DV ++  ++ G C 
Sbjct: 138 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICR 195

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GD + A ++L ++EE     +V  Y+++ID  C++G I+ A  LF+++   G+ ++  T
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ GL K G   DG    + M    + P++ T+N L+  +  EGK+ E  +L+ EM 
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R ++ N++TYNTL+ G C + R+ EA  +LD M     SP+++T+  LI G+C     D
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
              ++F  +   G   + VTY++L++ F ++G  K+A +L +EM   G+ P  +TY IL+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D    +  +EKA E++  +QKS     +  Y  +I G+C  G +++A  LF S+    ++
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN + Y +MI G CK+G+   A  LL +M E G  PN  +Y++ I    +DG    +  L
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555

Query: 548 LNQMLKLGLKPSVS 561
           + +M   G     S
Sbjct: 556 IEEMKSCGFSADAS 569



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 3/414 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
           +A+    +M+++G +P   T+NS++  + +S   S     L   E R  V+ DV+++  +
Sbjct: 166 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 224

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G ++ A  +  ++E  G   +VV Y SL+ G CK G      +L + +    +
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    T+ VL+    K G  ++  E Y++M   G+SP++ TYN L+  YC + ++SE   
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M   + + ++VT+ +LI G C   RV +  ++   +   G+  N +TY+ L+ GFC
Sbjct: 345 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+   A  LF ++ S+G  P V+TY +L+      G  + A ++  ++++  +    V
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT +I+   +   +E A+ ++  +   G  P+V TY V+I GLC KG++ EA+ L   M
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            E    PND  YN +I  + ++G+   + +L+ EM   G   + +S    I +L
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 231/511 (45%), Gaps = 60/511 (11%)

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPS---------SSNPVTKSRLYESIIDAHLKSRL 121
           L++I   +  +      LLC ++  F S         + N   + RL   I+D       
Sbjct: 4   LRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIK----- 58

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK------VELDV 175
            D A+  F +M+ S   P    F+     + ++  F+    F     CK      +  ++
Sbjct: 59  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDF-----CKQLELNGIAHNI 113

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y+  I+I   C       A+ VL ++ ++G+ P+                          
Sbjct: 114 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT------------------------ 149

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
                      T+  LI GLF  G   +     ++M  NG  P + TYN +++  C  G 
Sbjct: 150 -----------TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 198

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
            S    L  +M  R V  +V TY+T+I  LC++  +  A  L  +M+  GI  +V+TYN 
Sbjct: 199 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 258

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+ G C AG+ +    L   + S    P+V+T+NVL+  F K G  + A++L +EM  RG
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I+P+ +TY  L+D +   + + +A  M  LM ++  SPD+ T+  LI G CM   + +  
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           K+F ++ +  L  N V Y++++ G+C+ G    A  L  EM   G++P++ +Y   +  L
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C +GK  +A  +   + K  +   + +Y  +
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 171/412 (41%), Gaps = 67/412 (16%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +N VT S L +    +  K +L+++    F +M+  GV P   T+  LL  +  +   +K
Sbjct: 391 ANAVTYSILVQGFCQSG-KIKLAEE---LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446

Query: 160 GWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               F +  + K++L +  +  +I+G C+ G +  A+ +   L   G  PNV+ YT +I 
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK G +  A +L RK+ E G      TY  LI    ++G      +  E+M+  G S 
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566

Query: 279 SLYTYNCLIH-----------EYCN-----------EGKVSEGFKLFDEMRHREVACNVV 316
              +   +I             YC            E   SE  +L      +   CN +
Sbjct: 567 DASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTI 626

Query: 317 TYNTLICGL-CKEMRVQEAERLLDQMKMAGI-------SPNVITYNKLIDGFCDAGETDK 368
           T +  +  +  + M   E  R L +++ + +          V+  N+L+    +  E D 
Sbjct: 627 TTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDL 686

Query: 369 AFRL------------FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
              L              +++  G+  +VVT                A +L +EM +RGI
Sbjct: 687 MVDLELPTDAVHYAHRAGRMRRPGRKMTVVT----------------AEELHKEMIQRGI 730

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            P+ +TY+ LID F + + +++A +M  LM   G S   Y    L+ GL  K
Sbjct: 731 APNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRY----LLAGLMRK 778


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 249/442 (56%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           A+  F +M + G+   + T+  L+  + K+           + +   + DV+++G++I  
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDS 155

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G   +A ++ +++   G  P+VV+Y+SL+DG C+ G ++ A   F+++   G+ A 
Sbjct: 156 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 215

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
            +TY  LI GL + GL K+   F   M   G SP  +T+  LI   C EGKV E  ++ +
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M H+    +++TYNTL+ GLC   ++++A +L + +   GI  NV +YN LI+G+C   
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+AFRLF +++  G  PS VTYN LI A  ++G  + A  L  EM+  G      TY 
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           +L+D   ++  +E+A +++  ++K+   P++  + +L+ G+C  G ++EA K F+ + + 
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            LEP+ + YN++I G C +G    A++LL +M EKG +P+  +++  I  L ++ +  EA
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             LL +M      P  ++ ++L
Sbjct: 516 IQLLEEMRNRNFSPDEAVTSML 537



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 201/433 (46%), Gaps = 69/433 (15%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG---------- 254
           GF P+ V  T+L+ G      I  A  LF ++ E GL     TY +LI G          
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 255 ------------------------LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                   L K+G+  +  + + +M   G+ P +  Y+ L+   
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC--------------------------- 323
           C  G++ E  + F EM  R ++ +V TYN+LI                            
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 324 --------GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
                   GLCKE +V EA+++L+ M   G  P+++TYN L++G C  G+ + A +LF  
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           L   G   +V +YN+LI  + K      A  L  EM  +G+ PS VTY  LI +  +S  
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  A +++  MQ  G    + TY VL+ GLC  G+++EA  LF S+ +T+ +PN  V+++
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G C+ G    A +   E+++ GL P+  +Y+  I  LC  G   EA  LL QM + G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491

Query: 556 LKPSVSLYNILYR 568
             P    +N++ +
Sbjct: 492 CLPDSITFNVIIQ 504



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 1/295 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P   T   L+     E  + +  +LFDEM  + +  +  TY  LI GLCK  +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +L ++MK      +V TY  +ID  C  G T +A  +F+++   G  P VV Y+ L+  
Sbjct: 132 IKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             + G  K A +  +EME RGI+    TY  LI    R+   ++     +LM   GFSPD
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
            +T+ +LI GLC +G + EA ++   M     EP+ + YN ++ G C  G    A +L  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + ++G+  N+ SY+  I   C+D K  EA  L  +M   GLKPS   YN L  A
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  ++D   K+   ++A+  F  +  +  +P    F+ LL  + ++   ++ W  F E +
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D  ++ ILI G C  G L++A ++L Q+EE G  P+ + +  +I    K  +I 
Sbjct: 454 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 513

Query: 228 RAKMLFRKIGELGLVATQHTYTVLIC 253
            A  L  ++        +   ++L+C
Sbjct: 514 EAIQLLEEMRNRNFSPDEAVTSMLLC 539


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 222/398 (55%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LIKG    G +++A  +++++ E G  P+VV Y S+++G C++GD   A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L RK+ E  + A   TY+ +I  L ++G        +++M+  G+  S+ TYN L+   C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK ++G  L  +M  RE+  NV+T+N L+    KE ++QEA  L  +M   GISPN+I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L+DG+C      +A  + + +  N  SP +VT+  LI+ +           + R +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+  + VTY+IL+  F +S  ++ A E++  M   G  PDV TYG+L+ GLC  G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++F  + ++K++   V+Y  +I G CK G    A  L   +  KG+ PN+ +Y+  
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+ G   EA +LL +M + G  P+   YN L RA
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 234/434 (53%), Gaps = 5/434 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCE 187
           +++  G  P + TFN+L+  +       +  +      EN C  + DV ++  ++ G C 
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICR 205

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GD + A ++L ++EE     +V  Y+++ID  C++G I+ A  LF+++   G+ ++  T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ GL K G   DG    + M    + P++ T+N L+  +  EGK+ E  +L+ EM 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R ++ N++TYNTL+ G C + R+ EA  +LD M     SP+++T+  LI G+C     D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
              ++F  +   G   + VTY++L++ F ++G  K+A +L +EM   G+ P  +TY IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D    +  +EKA E++  +QKS     +  Y  +I G+C  G +++A  LF S+    ++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN + Y +MI G CK+G+   A  LL +M E G  PN  +Y++ I    +DG    +  L
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 548 LNQMLKLGLKPSVS 561
           + +M   G     S
Sbjct: 566 IEEMKSCGFSADAS 579



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 3/414 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
           +A+    +M+++G +P   T+NS++  + +S   S     L   E R  V+ DV+++  +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 234

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G ++ A  +  ++E  G   +VV Y SL+ G CK G      +L + +    +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    T+ VL+    K G  ++  E Y++M   G+SP++ TYN L+  YC + ++SE   
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M   + + ++VT+ +LI G C   RV +  ++   +   G+  N +TY+ L+ GFC
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+   A  LF ++ S+G  P V+TY +L+      G  + A ++  ++++  +    V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT +I+   +   +E A+ ++  +   G  P+V TY V+I GLC KG++ EA+ L   M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            E    PND  YN +I  + ++G+   + +L+ EM   G   + +S    I +L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 230/506 (45%), Gaps = 50/506 (9%)

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPS---------SSNPVTKSRLYESIIDAHLKSRL 121
           L++I   +  +      LLC ++  F S         + N   + RL   I+D       
Sbjct: 14  LRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIK----- 68

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
            D A+  F +M+ S   P    F+     + ++  F+    F  +     +  ++Y+  I
Sbjct: 69  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C       A+ VL ++ ++G+ P+                               
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTT----------------------------- 159

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 T+  LI GLF  G   +     ++M  NG  P + TYN +++  C  G  S   
Sbjct: 160 ------TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  +M  R V  +V TY+T+I  LC++  +  A  L  +M+  GI  +V+TYN L+ G 
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG+ +    L   + S    P+V+T+NVL+  F K G  + A++L +EM  RGI+P+ 
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  L+D +   + + +A  M  LM ++  SPD+ T+  LI G CM   + +  K+F +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + +  L  N V Y++++ G+C+ G    A  L  EM   G++P++ +Y   +  LC +GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A  +   + K  +   + +Y  +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTI 479


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 241/466 (51%), Gaps = 36/466 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           + QML+SG++P   TFN+L+  + K     +  L  S+  +  +  DV+++  LI G C 
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             +L+ AF V +++ + G  PN V Y++LI+G C  G ++ A  +  ++ E G+  T +T
Sbjct: 288 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 347

Query: 248 YTV-----------------------------------LICGLFKNGLQKDGFEFYEKMQ 272
           YT+                                   LI GL + G  +     Y KM 
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ P+  TYN LI+E C  G+ S   K+F  M       N  TYN +I GLC    ++
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 467

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  L ++M   G  P V+TYN LI+G+   G  + A RL + +K NG  P   TYN L+
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             FSK G  + AS   +EM E G+ P+ V+YT LID   +   ++ A  +   M++ G +
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V +Y  +I+GL  +    EA K+ + M E  L PN + Y  +I G C+ G +  A ++
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             +M ++  +PN+ +YSS I  LCQ+GK  EAE+LL +M + GL P
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/479 (32%), Positives = 243/479 (50%), Gaps = 3/479 (0%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L+Q+F    +P   +  Y S+I  H ++R  D A   F +M+  G  P S T+++L+  +
Sbjct: 263 LSQIFQYDLSPDVFT--YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
                 D+      E   K +E  VY++ + I   C      +A E++ ++++ G  PNV
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             YT+LI G  + G +E A  L+ K+ + GLV    TY  LI  L   G      + +  
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+ +G   +  TYN +I   C  G + +   LF++M        VVTYNTLI G   +  
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V  A RLLD MK  G  P+  TYN+L+ GF   G+ + A   F ++   G +P+ V+Y  
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI   SK G   +A  L+  MEE G  P+  +Y  +I+   + +   +A ++   M + G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V TY  LI GLC  G  + A K+F+ M + K  PN   Y+ +I+G C+EG +  A 
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LL EM  KGL P+  +++S I      G+   A +LL +M+ +G KP+   Y++L + 
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 232/475 (48%), Gaps = 27/475 (5%)

Query: 119 SRLS--DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DV 175
           SRL   + A+  +H+ML  G+ P + T+N+L+  +     F      F        L + 
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  +IKG C  GD+ KA  +  ++ +MG  P VV Y +LI+G    G++  A  L   
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E G    + TY  L+ G  K G  +    ++++M   G++P+  +Y  LI  +  +GK
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V     L + M       NV +YN +I GL KE R  EAE++ D+M   G+ PNVITY  
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG C  G T  AF++F+ ++     P++ TY+ LI    + G +  A  L++EME +G
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL---CM----- 467
           + P EVT+T LID FV    ++ AF +   M   G  P+  TY VL+ GL   C+     
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEK 750

Query: 468 ----------------KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
                             N +  S L   M E   EP    Y+ ++ G C++G  Y A +
Sbjct: 751 VAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 810

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L+ +M E+G  P+   Y S +   C++ +   A  + + +   G +  +S+Y  L
Sbjct: 811 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 215/434 (49%), Gaps = 16/434 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLF--FSENRCKVELDVYSFG 179
           ++A+  F +ML  G  P   T+N+L+  ++ K    +   L     EN C  E D +++ 
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC--EPDEWTYN 524

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G  + G L  A     ++ E G +PN V YT+LIDG  K+G ++ A  L  ++ E+
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      +Y  +I GL K     +  +  +KM   G+ P++ TY  LI   C  G+    
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           FK+F +M  R+   N+ TY++LI GLC+E +  EAE LL +M+  G++P+ +T+  LIDG
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F   G  D AF L  ++   G  P+  TY+VL++   K             +EE+     
Sbjct: 705 FVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE---------CLLLEEKVAVQH 755

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           E  Y+       +  + E    + + M + G  P + TY  L+ GLC KG   EA +L  
Sbjct: 756 EAVYSF--SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 813

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M E    P+  +Y  ++  +CK      AL++   +  KG   +++ Y + I  LC+ G
Sbjct: 814 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 873

Query: 540 KWPEAEVLLNQMLK 553
           +  EA+ L + ML+
Sbjct: 874 QVEEAQALFDNMLE 887



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 227/475 (47%), Gaps = 25/475 (5%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P+     Y ++I+ +L     + A      M ++G  P   T+N L+    K    +   
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 162 LFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            +F E   C +  +  S+  LI G  + G ++ A  +L ++EEMG +PNV  Y ++I+G 
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            K      A+ +  K+ E GL+    TYT LI GL +NG  +  F+ +  M+     P+L
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY+ LI+  C EGK  E   L  EM  + +A + VT+ +LI G     R+  A  LL +
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 341 MKMAGISPNVITYNKLIDGF---C-----------------DAGETDKAFRLFNQLKSN- 379
           M   G  PN  TY+ L+ G    C                    E D  F + + L +  
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM 780

Query: 380 ---GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G  P++ TY+ L+    + G    A  LV++M+ERG  P    Y  L+ +  ++ ++
Sbjct: 781 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 840

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A +++  ++  GF   +  Y  LI  LC  G ++EA  LF++M E +   +++V+ ++
Sbjct: 841 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           + G  KEG     ++LL  M  K   PNI +Y      L + GK  E+E L +++
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 199/408 (48%), Gaps = 35/408 (8%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  Q+   G  P+++ + +LI+   K G +  A+++  +I +  L     TYT LI 
Sbjct: 224 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 283

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM------- 306
           G  +N      F  +++M   G  P+  TY+ LI+  CNEG+V E   + +EM       
Sbjct: 284 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 343

Query: 307 --------------------------RHREVAC--NVVTYNTLICGLCKEMRVQEAERLL 338
                                     R ++  C  NV TY  LI GL +  +++ A  L 
Sbjct: 344 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 403

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ PN +TYN LI+  C  G    A ++F+ ++ +G   +  TYN +I+     
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G+ + A  L  +M + G  P+ VTY  LI+ ++   ++  A  +  LM+++G  PD +TY
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G    G ++ AS  F  M E  L PN V Y  +I G+ K+G    AL LL  M E
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G  PN+ SY++ I  L ++ ++ EAE + ++M + GL P+V  Y  L
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 190/387 (49%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ++IK C    ++ +  + LN++  MGF  ++    +L+    K   +E A+ L++++   
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+  +  T+  LI  L K G  ++      ++    +SP ++TY  LI  +C    +   
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F +FD M       N VTY+TLI GLC E RV EA  +L++M   GI P V TY   I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C     ++A  L  ++K  G  P+V TY  LI   S+ G  ++A  L  +M + G+ P+
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY  LI+          A +++  M+  G   +  TY  +I GLC+ G++++A  LF 
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    P  V YN +I GY  +GN   A RLL  M E G  P+  +Y+  +    + G
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           K   A     +M++ GL P+   Y  L
Sbjct: 535 KLESASFYFQEMVECGLNPNPVSYTTL 561



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 202/437 (46%), Gaps = 46/437 (10%)

Query: 76  GRITSSSFTPRSLL-CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           G++ S+SF  + ++ C L      + NPV+    Y ++ID H K    D AL    +M +
Sbjct: 534 GKLESASFYFQEMVECGL------NPNPVS----YTTLIDGHSKDGKVDIALSLLERMEE 583

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK------VELDVYSFGILIKGCCEA 188
            G  P   ++N+++  + K   F +     +E  C       +  +V ++  LI G C  
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSE-----AEKICDKMAEQGLLPNVITYTTLIDGLCRN 638

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G    AF++ + +E+    PN+  Y+SLI G C+ G  + A++L +++   GL   + T+
Sbjct: 639 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTF 698

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI-----------------HEYC 291
           T LI G    G     F    +M   G  P+  TY+ L+                 HE  
Sbjct: 699 TSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV 758

Query: 292 NEGKVSE---GFKLFDEM--RHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
                 E    F++   +  R  E+ C   + TY+TL+ GLC++ R  EAE+L+  MK  
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 818

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P+   Y  L+   C   E D A ++F+ +++ G    +  Y  LI A  KAG  + A
Sbjct: 819 GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 878

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L   M E+     E+ +T+L+D  ++  +++   ++  +M+   F+P++ TY +L   
Sbjct: 879 QALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRE 938

Query: 465 LCMKGNMKEASKLFNSM 481
           L   G   E+  L + +
Sbjct: 939 LSRIGKSIESEPLADKL 955



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 117/296 (39%), Gaps = 64/296 (21%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           + S+ID  +     D A     +M+D G +P   T++ LL  + K C             
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEA 757

Query: 156 --SF---DKGWLF---------FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
             SF   +K   F          SE  C+  LD YS   L+ G C  G   +A +++  +
Sbjct: 758 VYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYS--TLVSGLCRKGRFYEAEQLVKDM 815

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           +E GF P+  IY SL+   CKN +++ A  +F  I   G       Y  LIC L      
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL------ 869

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
                                        C  G+V E   LFD M  +E   + + +  L
Sbjct: 870 -----------------------------CKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           + GL KE  +    +LL  M+    +PN+ TY  L       G++ ++  L ++LK
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLI--RAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           KA  +   +  +  + SV+ +   I  R F K   +   S L R + +R   P++    +
Sbjct: 116 KAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRIL 175

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I +    +++ +  +  + +   GF   +Y+   L+  L     ++ A  L+  M  + 
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+ + +N +I    K+G    A  +L ++ +  L P++ +Y+S I   C++     A 
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            + ++M+K G  P+   Y+ L
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTL 316


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/440 (32%), Positives = 239/440 (54%), Gaps = 1/440 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
           QM  +G+ P + T N L+         D G+   ++  +  ++  + +F  LI G C+AG
Sbjct: 116 QMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG 175

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +  +A E+ + +   G  P+V  YT++I+G CK G+   A  L +K+GE+G      TY+
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI  L K+ L  +  + +  M+  G+SP++ +Y  LI   C+  +  E   + +EM   
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  ++VT++ LI   CKE  V EA+ +L  M   G+ PNVITYN L+ G+    E  +A
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +LF+ + + G  P V +Y++LI  +        A  L  EM  +G+TP+ V+YT LI +
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +   + +A E++  M  +G+ PD+ TY VL+ G C +G + +A +LF +M  T L+PN
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V+Y ++I   CK GN   A +L  E+   GL P++  Y++ I  LC++G   EA     
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           +M + G  P+   YN++ R 
Sbjct: 536 KMEEDGCPPNEFSYNVIIRG 555



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 219/422 (51%), Gaps = 1/422 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G++P   TF +L+  + K+  F +    F +   +  + DVY++  +I G C+ G+   A
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             ++ ++ E+G  P+VV Y++LID  CK+  +  A  +F  +   G+  T  +YT LI G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L      K+      +M    + P + T++ LI  +C EG V E   +   M    V  N
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN+L+ G   +M V EA +L D M   G  P+V +Y+ LI+G+C     D+A +LFN
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++   G +P+ V+Y  LI AF + G  + A +L ++M   G  P   TY++L++ F +  
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            + KAF ++  MQ +   P++  Y +LI  +C  GN+  A KLF+ ++   L+P+  +Y 
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT 515

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G CKEG    AL    +M E G  PN  SY+  I    Q      A  L+ +M   
Sbjct: 516 TIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575

Query: 555 GL 556
           G 
Sbjct: 576 GF 577



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 220/417 (52%), Gaps = 1/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           + ++I+   K+    QAL  F  M+  G +P   T+ +++  + K   +     L     
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMG 223

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV ++  LI   C+   +N+A ++ + ++  G SP VV YTSLI G C     +
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++  L ++    T+++LI    K G   +     + M   GV P++ TYN L+
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y  + +V E  KLFD M  R    +V +Y+ LI G C   R+ EA++L ++M   G++
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN ++Y  LI  FC  G+  +A  LF  + +NG  P + TY+VL+  F K G    A  L
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M+   + P+ V YTILIDS  +S ++  A +++S +   G  PDV  Y  +I+GLC 
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +G + EA + F  M E    PN+  YN++I G+ +  +  RA++L+GEM +KG V +
Sbjct: 524 EGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 153/301 (50%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M+L G+SP+  T N LI+ +C    V  GF +  ++    +   ++T+ TLI GLCK 
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKA 174

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
               +A  L D M   G  P+V TY  +I+G C  GET  A  L  ++   G  P VVTY
Sbjct: 175 GEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTY 234

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           + LI +  K      A D+   M+ +GI+P+ V+YT LI         ++A  M + M  
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
               PD+ T+ +LI   C +GN+ EA  +  +M E  +EPN + YN ++ GY  +     
Sbjct: 295 LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVE 354

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L   M  +G  P++ SYS  I   C   +  EA+ L N+M+  GL P+   Y  L  
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 569 A 569
           A
Sbjct: 415 A 415



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 44/354 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++ID+  K RL ++AL  F  M   G+ P   ++ SL+  +   CSF + W     + 
Sbjct: 234 YSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL---CSFSR-WKEASAML 289

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL------- 216
                  +  D+ +F +LI   C+ G++ +A  VL  + EMG  PNV+ Y SL       
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349

Query: 217 ----------------------------IDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
                                       I+G C    I+ AK LF ++   GL     +Y
Sbjct: 350 MEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSY 409

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T LI    + G  ++  E ++ M  NG  P L TY+ L+  +C +G + + F+LF  M+ 
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N+V Y  LI  +CK   +  A +L  ++ + G+ P+V  Y  +I+G C  G  D+
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A   F +++ +G  P+  +YNV+IR F +  +   A  L+ EM ++G    E T
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 222/435 (51%), Gaps = 35/435 (8%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   V  D +S+GILI G  +AG LN A ++  +L   G +P+ V YTSLI G C     
Sbjct: 2   NERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ LF  +   G   +  TY V+I    K G+ ++  +  +KM  +G  P + TYN +
Sbjct: 62  DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C  G+V E   LF+EM       N  ++NT+I GLC++ ++ +A ++  +M+   I
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  +Y  LIDG   AG+ ++A++LF ++  +G +PS VTYNV+I     A     A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG------- 459
           L + M  +G  PS  T+ ILID+  +   M++AF +   M   G  PDV TY        
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 460 ----------------------------VLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
                                        LIHGLC  G +KEA ++ ++M  +   P+ V
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN ++ G+C+ G + RA  LL +M  +GL PN+ +Y++ +  LC+  + PEA  +  QM
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 552 LKLGLKPSVSLYNIL 566
              G  P++  Y  L
Sbjct: 422 KSSGCAPNLFTYTAL 436



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 243/492 (49%), Gaps = 42/492 (8%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           +PVT    Y  IIDA  K  + ++A     +M++ G  P   T+N+++  + KS   ++ 
Sbjct: 79  SPVT----YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            L F+E  R     +  S   +I G C+   +++A +V +++E     P+   Y  LIDG
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             K G +  A  LFR++ + G+  +  TY V+I G+       +  E ++ M+  G  PS
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
            +T+N LI  +C  GK+ E F+L   M       +VVTY+TLI GLC   RV +A  LL+
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M      P V+T N LI G C AG   +A  + + + S+GQSP VVTYN L+    +AG
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
            ++ A +L+ +M  RG+ P+ VTYT L+    +++ + +A  +++ M+ SG +P+++TY 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI G C  G +    KLF  M    + P+ VVY  +    CK G S RAL +L E  E 
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 520 -------------------------------------GLVPNIASYSSTIGVLCQDGKWP 542
                                                G +P     +S +  LC+ G+  
Sbjct: 495 LRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 554

Query: 543 EAEVLLNQMLKL 554
           EA  +L +++ L
Sbjct: 555 EARAVLEEIMDL 566



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 228/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +ID   K+   + A   F ++L SGV P +  + SL+  +  + SFD     F++ N
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R        ++ ++I   C+ G L +A +++ ++ E G  P+VV Y +++DG CK+G +E
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +LF ++  LG    + ++  +I GL +        + + +M+   + P  ++Y  LI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 GK++E +KLF  M    +  + VTYN +I G+C    + EA  L   M+  G  
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  T+N LID  C  G+ D+AFRL  ++  +G  P VVTY+ LI           A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M +R   P+ VT   LI    ++  +++A E+   M  SG SPDV TY  L+HG C 
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G  + A +L + M    L PN V Y  ++ G CK      A  +  +M   G  PN+ +
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I   C  G+      L  +M+  G+ P   +Y  L
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 147/331 (44%), Gaps = 70/331 (21%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R V+ +  +Y  LI GL K  ++ +A  L  ++  +G++P+ + Y  LI G C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A  LF  +   G  PS VTYNV+I A  K G  + A DL+++M E G  P  VTY  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSG----------------------------------- 450
           ++D   +S  +E+A  +++ M++ G                                   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG----------- 499
             PD ++YG+LI GL   G + EA KLF  M ++ + P+ V YN++I G           
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 500 ------------------------YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                                   +CK G    A RLL  M + G VP++ +YS+ I  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C   +  +A  LL  M+K   KP+V   N L
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 262/508 (51%), Gaps = 31/508 (6%)

Query: 32  FNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC 90
           F W  ++ G  H  +    +L LL       ++A     I  ++     ++ ++  ++  
Sbjct: 94  FKWTQKEFGAIHNVEQFCRLLHLL-------ANAKNYNKIRALLDSFAKNAHYSNSTIFH 146

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
            L+ L    S     S + + ++ A++K+   D AL  F +  D G R  + + N +L+ 
Sbjct: 147 SLSVL---GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 151 VIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           ++K          + E  R ++ ++V +F ++I G C+ G   KA +V+  ++  GFSP+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           V+ Y ++IDG CK G + +A  L +++    +   + T+ +LI G  ++       + +E
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +MQ  G+ P++ TYN LI+  C+ GK+ E   L D+M    +  NVVTYN LI G CK+ 
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            ++EA  +LD +   G++PNVIT+N LID +  AG  D AF L + +   G  P+V TYN
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM---YSLM 446
            LI  F + GN K A  L +EME  G+    VTY IL+D+  +  +  KA  +    +LM
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM 503

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +K G   ++ TY VLI G C KG ++EA++L N M E  L PN   Y++           
Sbjct: 504 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI----------- 552

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGV 534
                L  EM EKG +P+I  +   + +
Sbjct: 553 -----LRDEMMEKGFIPDIDGHLYNVSI 575



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 223/390 (57%), Gaps = 3/390 (0%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+    + G+++ A E  ++  + GF  + +    ++    K G I   + +++++   
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +     T+ V+I GL K G  +   +  E M+  G SPS+ TYN +I  YC  GK+ + 
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM  + +  N +T+N LI G C++  V  A+++ ++M+  G+ PNV+TYN LI+G
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G+ D+A  L +++   G  P+VVTYN LI  F K    K A +++ ++ +RG+ P+
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +T+  LID++ ++  M+ AF + S+M  +G  P+V TY  LI G C +GN+KEA KL  
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN---EKGLVPNIASYSSTIGVLC 536
            M    L+ + V YN+++   CK+G + +A+RLL EM    +KG   NI +Y+  I   C
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC 523

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             GK  EA  LLN+ML+ GL P+ + Y+IL
Sbjct: 524 NKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 184/357 (51%), Gaps = 3/357 (0%)

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV--LICGLFKNGLQKDGFEFYEKMQ 272
           +L+D   KN     +  +F  +  LG     ++  V  L+    KNG      E +++  
Sbjct: 128 ALLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAG 186

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G   S  + N ++     EG++     ++ EM  R +  NVVT++ +I GLCK  + Q
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  +++ MK  G SP+VITYN +IDG+C AG+  KA  L  ++ +    P+ +T+N+LI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F +  N   A  +  EM+ +G+ P+ VTY  LI+    +  +++A  +   M   G  
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY  LI+G C K  +KEA ++ + + +  L PN + +N +I  Y K G    A  L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              M + G+ PN+++Y+  I   C++G   EA  L  +M   GLK  +  YNIL  A
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 225/414 (54%), Gaps = 1/414 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G  P    +N++L+ +  +       L  S  R  V  +VY++ IL++  C  G   +A 
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 196 EVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            V+ + +   G +PNVV Y +L+   C+ G+++ A+ L   + E G+  +  T+  ++ G
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K G  +D  + +++M   G++P   +YN L+  YC  G + E   +F EM  + V  +
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+ +LI  +C+   ++ A  L+ QM+  G+  N  T+  LIDGFC  G  D A     
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++     PSVV YNVLI  + K G    A +L+ EME +G+ P  VTY+ ++  + +  
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D + AFE+   M K G  PD  TY  LI GLC +  + +A +LF  M +  L+P++  Y 
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            +I G+CKEGN  +AL L  EM +KG++P++ +YS  I  L +  +  EA+ LL
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 231/460 (50%), Gaps = 16/460 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +++ A  ++   D A      M + GVRP   TFN+++  + K+   +     F E  
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA 252

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  D  S+  L+ G C+AG L++A  V  ++ + G  P+VV +TSLI   C+ G++E
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLE 312

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++ E GL   + T+T LI G  +NG   D     ++M+   + PS+  YN LI
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC  G++ E  +L  EM  + +  +VVTY+T++ G CK      A  L  +M   G+ 
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY+ LI G C+      A  LF ++   G  P   TY  LI    K GN + A  L
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH---- 463
             EM ++G+ P  VTY++LID   +S   ++A  +   +      PD   Y  L+H    
Sbjct: 493 HDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRT 552

Query: 464 -----------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
                      G  MKG M +A K++ SM +   + +  VY+++I G+C+ GN  +AL  
Sbjct: 553 AEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSF 612

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
             ++   G  PN  S  S +  L ++G   EA+ ++ ++L
Sbjct: 613 HKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 206/363 (56%), Gaps = 2/363 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G++P+++ Y +++     +  +  A+ L   +   G+    +TY +L+  L   G +++ 
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 265 FEFY-EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                + M+  G +P++ TYN L+  +C  G+V    +L   MR   V  ++VT+NT++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  R+++A ++ D+M   G++P+ ++YN L+ G+C AG   +A  +F ++   G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            VVT+  LI A  +AGN + A  LV +M ERG+  +E T+T LID F R+  ++ A    
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M++    P V  Y VLI+G C  G M EA +L + M    ++P+ V Y+ ++ GYCK 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G++  A  L  +M +KG+VP+  +YSS I  LC++ +  +A  L  +ML+LGL+P    Y
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 564 NIL 566
             L
Sbjct: 474 TTL 476



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 224/452 (49%), Gaps = 17/452 (3%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGILIKGCCEAG 189
           ML  GV P   T+N L+  +      ++      ++        +V ++  L+   C AG
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +++ A  ++  + E G  P++V + ++++G CK G +E A+ +F ++   GL     +Y 
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  K G   +    + +M   GV P + T+  LIH  C  G +     L  +MR R
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N  T+  LI G C+   + +A   + +M+   I P+V+ YN LI+G+C  G  D+A
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L +++++ G  P VVTY+ ++  + K G++  A +L R+M ++G+ P  +TY+ LI  
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                 +  A E++  M + G  PD +TY  LI G C +GN+++A  L + M +  + P+
Sbjct: 445 LCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPD 504

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN------------IASYSSTIGVL-- 535
            V Y+++I G  K   +  A RLL ++  +  VP+             A + S + +L  
Sbjct: 505 VVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKG 564

Query: 536 -CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               G   +A+ +   ML    K   S+Y++L
Sbjct: 565 FSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 170/300 (56%), Gaps = 1/300 (0%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF-DEMRHREVACNVVTYNTLICGLCKEM 329
           M  +GV+P++YTYN L+   C  G+  E   +  D+MR    A NVVTYNTL+   C+  
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            V  AERL+  M+  G+ P+++T+N +++G C AG  + A ++F+++   G +P  V+YN
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            L+  + KAG    A  +  EM ++G+ P  VT+T LI +  R+ ++E+A  +   M++ 
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G   + +T+  LI G C  G + +A      M E +++P+ V YN++I GYCK G    A
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             L+ EM  KG+ P++ +YS+ +   C+ G    A  L  +MLK G+ P    Y+ L R 
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           DK +    +   K++  VYS  +LI G C  G++ KA     QL   GFSPN     SL+
Sbjct: 575 DKVYQSMLDRHWKLDGSVYS--VLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLV 632

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGV 276
            G  + G    A  + +++     +A   T   LI     +  +K+G  +++   +L   
Sbjct: 633 RGLFEEGMTVEADNVIQELLNCCSLADAETSKALI-----DLNRKEGVGYFQAQGELCMQ 687

Query: 277 SPSLYT--YNCLI 287
            P+L+   +NC++
Sbjct: 688 KPALFVEHWNCMM 700


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 222/398 (55%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LIKG    G +++A  +++++ E G  P+VV Y S+++G C++GD   A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L RK+ E  + A   TY+ +I  L ++G        +++M+  G+  S+ TYN L+   C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK ++G  L  +M  RE+  NV+T+N L+    KE ++QEA  L  +M   GISPN+I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L+DG+C      +A  + + +  N  SP +VT+  LI+ +           + R +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+  + VTY+IL+  F +S  ++ A E++  M   G  PDV TYG+L+ GLC  G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++F  + ++K++   V+Y  +I G CK G    A  L   +  KG+ PN+ +Y+  
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+ G   EA +LL +M + G  P+   YN L RA
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 231/429 (53%), Gaps = 5/429 (1%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLN 192
           G  P + TFN+L+  +       +  +      EN C  + DV ++  ++ G C +GD +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTS 210

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A ++L ++EE     +V  Y+++ID  C++G I+ A  LF+++   G+ ++  TY  L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G   DG    + M    + P++ T+N L+  +  EGK+ E  +L+ EM  R ++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N++TYNTL+ G C + R+ EA  +LD M     SP+++T+  LI G+C     D   ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F  +   G   + VTY++L++ F ++G  K+A +L +EM   G+ P  +TY IL+D    
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  +EKA E++  +QKS     +  Y  +I G+C  G +++A  LF S+    ++PN + 
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y +MI G CK+G+   A  LL +M E G  PN  +Y++ I    +DG    +  L+ +M 
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570

Query: 553 KLGLKPSVS 561
             G     S
Sbjct: 571 SCGFSADAS 579



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 3/414 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
           +A+    +M+++G +P   T+NS++  + +S   S     L   E R  V+ DV+++  +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 234

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G ++ A  +  ++E  G   +VV Y SL+ G CK G      +L + +    +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    T+ VL+    K G  ++  E Y++M   G+SP++ TYN L+  YC + ++SE   
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M   + + ++VT+ +LI G C   RV +  ++   +   G+  N +TY+ L+ GFC
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+   A  LF ++ S+G  P V+TY +L+      G  + A ++  ++++  +    V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT +I+   +   +E A+ ++  +   G  P+V TY V+I GLC KG++ EA+ L   M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            E    PND  YN +I  + ++G+   + +L+ EM   G   + +S    I +L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 230/506 (45%), Gaps = 50/506 (9%)

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPS---------SSNPVTKSRLYESIIDAHLKSRL 121
           L++I   +  +      LLC ++  F S         + N   + RL   I+D       
Sbjct: 14  LRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIK----- 68

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
            D A+  F +M+ S   P    F+     + ++  F+    F  +     +  ++Y+  I
Sbjct: 69  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C       A+ VL ++ ++G+ P+                               
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTT----------------------------- 159

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 T+  LI GLF  G   +     ++M  NG  P + TYN +++  C  G  S   
Sbjct: 160 ------TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  +M  R V  +V TY+T+I  LC++  +  A  L  +M+  GI  +V+TYN L+ G 
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG+ +    L   + S    P+V+T+NVL+  F K G  + A++L +EM  RGI+P+ 
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  L+D +   + + +A  M  LM ++  SPD+ T+  LI G CM   + +  K+F +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + +  L  N V Y++++ G+C+ G    A  L  EM   G++P++ +Y   +  LC +GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A  +   + K  +   + +Y  +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTI 479



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 37/368 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID+  +    D A+  F +M   G++    T+NSL+  + K+  ++ G L   +  
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290

Query: 169 CK----------VELDVY--------------------------SFGILIKGCCEAGDLN 192
            +          V LDV+                          ++  L+ G C    L+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  +L+ +     SP++V +TSLI G C    ++    +FR I + GLVA   TY++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  ++G  K   E +++M  +GV P + TY  L+   C+ GK+ +  ++F++++  ++ 
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             +V Y T+I G+CK  +V++A  L   +   G+ PNV+TY  +I G C  G   +A  L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             +++ +G +P+  TYN LIRA  + G+   ++ L+ EM+  G +    +  ++ID  + 
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL- 589

Query: 433 SDDMEKAF 440
           S +++K+F
Sbjct: 590 SGELDKSF 597


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/477 (32%), Positives = 245/477 (51%), Gaps = 36/477 (7%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVY 176
           K  + + A   + QML+SG++P   TFN+L+  + K     +  L  S+  +  +  DV+
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 234

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI G C   +L+ AF V +++ + G  PN V Y++LI+G C  G ++ A  +  ++
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294

Query: 237 GELGLVATQHTYTV-----------------------------------LICGLFKNGLQ 261
            E G+  T +TYT+                                   LI GL + G  
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +     Y KM   G+ P+  TYN LI+E C  G+ S   K+F  M       N  TYN +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLC    +++A  L ++M   G  P V+TYN LI+G+   G  + A RL + +K NG 
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 474

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P   TYN L+  FSK G  + AS   +EM E G+ P+ V+YT LID   +   ++ A  
Sbjct: 475 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALS 534

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M++ G +P+V +Y  +I+GL  +    EA K+ + M E  L PN + Y  +I G C
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           + G +  A ++  +M ++  +PN+ +YSS I  LCQ+GK  EAE+LL +M + GL P
Sbjct: 595 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 651



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 155/479 (32%), Positives = 244/479 (50%), Gaps = 3/479 (0%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L+Q+F    +P   +  Y S+I  H ++R  D A   F +M+  G  P S T+++L+  +
Sbjct: 221 LSQIFQYDLSPDVFT--YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
                 D+      E   K +E  VY++ + I   C      +A E++ ++++ G  PNV
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             YT+LI G  + G +E A  L+ K+ + GLV    TY  LI  L   G      + +  
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+ +G   +  TYN +I   C  G + +   LF++M        VVTYNTLI G   +  
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V  A RLLD MK  G  P+  TYN+L+ GF   G+ + A   F ++   G +P+ V+Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI   SK G   +A  L++ MEE G  P+  +Y  +I+   + +   +A ++   M + G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V TY  LI GLC  G  + A K+F+ M + K  PN   Y+ +I+G C+EG +  A 
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LL EM  KGL P+  +++S I      G+   A +LL +M+ +G KP+   Y++L + 
Sbjct: 639 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 200/408 (49%), Gaps = 35/408 (8%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  Q+   G  P+++ + +LI+   K G +  A+++  +I +  L     TYT LI 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM------- 306
           G  +N      F  +++M   G  P+  TY+ LI+  CNEG+V E   + +EM       
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 307 --------------------------RHREVAC--NVVTYNTLICGLCKEMRVQEAERLL 338
                                     R ++  C  NV TY  LI GL +  +++ A  L 
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ PN +TYN LI+  C  G    A ++F+ ++ +G   +  TYN +I+     
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G+ + A  L  +M + G  P+ VTY  LI+ ++   ++  A  +  LM+++G  PD +TY
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G    G ++ AS  F  M E  L PN V Y  +I G+ K+G    AL LL  M E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G  PN+ SY++ I  L ++ ++ EAE + ++M++ GL P+V  Y  L
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 182/350 (52%), Gaps = 3/350 (0%)

Query: 119 SRLS--DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DV 175
           SRL   + A+  +H+ML  G+ P + T+N+L+  +     F      F        L + 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  +IKG C  GD+ KA  +  ++ +MG  P VV Y +LI+G    G++  A  L   
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E G    + TY  L+ G  K G  +    ++++M   G++P+  +Y  LI  +  +GK
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V     L   M       NV +YN +I GL KE R  EAE++ D+M   G+ PNVITY  
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG C  G T  AF++F+ ++     P++ TY+ LI    + G +  A  L++EME +G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           + P EVT+T LID FV    ++ AF +   M   G  P+  TY VL+ GL
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 190/387 (49%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ++IK C    ++ +  + LN++  MGF  ++    +L+    K   +E A+ L++++   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+  +  T+  LI  L K G  ++      ++    +SP ++TY  LI  +C    +   
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F +FD M       N VTY+TLI GLC E RV EA  +L++M   GI P V TY   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C     ++A  L  ++K  G  P+V TY  LI   S+ G  ++A  L  +M + G+ P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY  LI+          A +++  M+  G   +  TY  +I GLC+ G++++A  LF 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    P  V YN +I GY  +GN   A RLL  M E G  P+  +Y+  +    + G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           K   A     +M++ GL P+   Y  L
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTAL 519



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 1/378 (0%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           ++N    +LN+L  +  F+P   I   +I  C    +I R      +I  +G   + ++ 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             L+  L K  + +     Y++M  +G+ PSL T+N LI+    +GKV E   +  ++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            +++ +V TY +LI G C+   +  A  + D+M   G  PN +TY+ LI+G C+ G  D+
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +  ++   G  P+V TY + I A     + + A +LV  M++RG  P+  TYT LI 
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R   +E A  +Y  M K G  P+  TY  LI+ LC+ G    A K+F+ M       
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N   YN +I G C  G+  +A+ L  +M + G +P + +Y++ I      G    A  LL
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 549 NQMLKLGLKPSVSLYNIL 566
           + M + G +P    YN L
Sbjct: 467 DLMKENGCEPDEWTYNEL 484



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 17/314 (5%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILR------------LLLSKMSSHSHAAAQTLILKIIS 75
           A  +F+W    G     Q+ + I++            +L  KM              +I+
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           G +T  +    + L  L +      +  T    Y  ++    K    + A FYF +M++ 
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWT----YNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G+ P   ++ +L+    K    D    L           +V S+  +I G  +    ++A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++ +++ E G  PNV+ YT+LIDG C+NG  + A  +F  + +   +   +TY+ LI G
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L + G   +     ++M+  G++P   T+  LI  +   G++   F L   M       N
Sbjct: 628 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687

Query: 315 VVTYNTLICGLCKE 328
             TY+ L+ GL KE
Sbjct: 688 YRTYSVLLKGLQKE 701



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLI--RAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           KA  +   +  +  + SV+ +   I  R F K   +   S L R + +R   P++    +
Sbjct: 74  KAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRIL 133

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I +    +++ +  +  + +   GF   +Y+   L+  L     ++ A  L+  M  + 
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+ + +N +I    K+G    A  +L ++ +  L P++ +Y+S I   C++     A 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            + ++M+K G  P+   Y+ L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTL 274


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 241/452 (53%), Gaps = 1/452 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           +  ++DA  ++  ++ A+     M+  G++P   T+NS+L  + +S  +DK W  F E +
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V  DV SF ILI G C  G++ +A ++  ++   G  P++V ++ LI    + G ++
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    R++   GLV     YT++I G  + GL  D     ++M   G  P + TYN L+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C E ++ +   L +EMR R V  ++ T+ TLI G C E ++ +A +L D M    + 
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN LIDG C  G+ DKA  L++ + S    P+ VTY++LI +  + G  + A   
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 493

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +GI P+ +TY  +I  + RS ++ K  +    M  +  SPD+ TY  LIHG   
Sbjct: 494 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 553

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +  M +A KL N M + K++P+ V YNM+I G+   GN   A  +  +M  KG+ P+  +
Sbjct: 554 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 613

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           Y S I      G   EA  L ++ML+ G  P 
Sbjct: 614 YMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 249/471 (52%), Gaps = 7/471 (1%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS----C 155
           S+P  + R+++ +I  + +SR   +A   F  +LD  V   +   N+LL  + ++     
Sbjct: 80  SSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHL 139

Query: 156 SFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           + D   L FS N    E++ Y+  I++   C+A + +K   V++++E+    P+VV +  
Sbjct: 140 AADAYRLVFSSNS---EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 196

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           ++D   + GD E A  L   +   GL     TY  ++ GL ++G+    +E +++M   G
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V+P + ++  LI  +C  G++ E  K++ EMRHR +  ++V+++ LI    +  ++  A 
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
             L +M+  G+ P+ + Y  +I GFC AG    A R+ +++   G  P VVTYN L+   
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A  L+ EM ERG+ P   T+T LI  +     ++KA +++  M      PD+
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI G+C +G++ +A+ L++ M   ++ PN V Y+++I  +C++G    A   L E
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  KG++PNI +Y+S I   C+ G   + +  L +M+   + P +  YN L
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 291/557 (52%), Gaps = 34/557 (6%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           +LP L A  L ++  R  ++ + Q+ + +L  L ++  S S  A+      +I+ R+  +
Sbjct: 150 RLPHLAAQLLHSFRRRGCVRPSLQAANAVLSAL-ARSPSTSPQASLDAFHSLIALRLHPN 208

Query: 82  SFTPRSLLCHL----------------TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
            +T  +LL H                  Q F  S + VT    Y ++++AH +  +  +A
Sbjct: 209 HYT-FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVT----YNTLLNAHCRKGMLGEA 263

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFG 179
                +M   G+ P   T+N+L+     S     GW+  + +  +       E D++++ 
Sbjct: 264 RTLLARMKKEGIVPTRATYNTLV-----SAYARLGWIKQATDVVEAMTAFGFEPDLWTYN 318

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           +L  G C+AG +++AF++ +++E++G  SP+VV Y +L+D C K      A  L  ++ E
Sbjct: 319 VLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMRE 378

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+ ++  T+ +++ GL + G  ++     E M   G++P + TYN LI   C  G V++
Sbjct: 379 KGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAK 438

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            F L DEM    +  +  T NTL+  LCKE R +EAE LL      G  P+ ++Y  ++ 
Sbjct: 439 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMA 498

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
            +    + + A  L++++     +PS+ TYN LI+  S  G    A D + E+ E G+ P
Sbjct: 499 AYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVP 558

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
            + TY I+I ++ +  D+EKAF+ ++ M ++ F PDV T   L++GLC+ G +++A KLF
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLF 618

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
            S  E   + + + YN +I   CK+ +   ALR   +M  +GL P++ +Y+  +  L + 
Sbjct: 619 ESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEA 678

Query: 539 GKWPEAEVLLNQMLKLG 555
           G+  EA+ +L+++ + G
Sbjct: 679 GRSVEAQKMLHKLNESG 695



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 245/524 (46%), Gaps = 47/524 (8%)

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTF 144
           R L  HL   FP+S+       L ++ +  + + RL   A    H     G VRP     
Sbjct: 123 RHLHRHLLASFPTSA-------LADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAA 175

Query: 145 NSLLIFVIKSCSFDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           N++L  + +S S         F S    ++  + Y+F +L+   C  G L  A   L+++
Sbjct: 176 NAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKM 235

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           +  G SP+ V Y +L++  C+ G +  A+ L  ++ + G+V T+ TY  L+    + G  
Sbjct: 236 QGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWI 295

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM--------------- 306
           K   +  E M   G  P L+TYN L    C  GKV E FKL DEM               
Sbjct: 296 KQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNT 355

Query: 307 ---------------------RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
                                R + V  ++VT+N ++ GLC+E +++EA   L+ M   G
Sbjct: 356 LVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG 415

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P+VITYN LID  C AG   KAF L +++  +G      T N L+    K    + A 
Sbjct: 416 LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAE 475

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+R   +RG  P EV+Y  ++ ++ +    E A  ++  M K   +P + TY  LI GL
Sbjct: 476 ELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G + EA    N + E  L P+D  YN++I  YCKEG+  +A +   +M E    P++
Sbjct: 536 STMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDV 595

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + ++ +  LC  G+  +A  L    ++ G K  V  YN L +A
Sbjct: 596 VTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQA 639



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 4/383 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           ++AL     M + G+ P   T+N+L+    K+ +  K ++   E  R  +++D ++   L
Sbjct: 402 EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTL 461

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+     +A E+L    + GF P+ V Y +++    K    E A  L+ ++ +  L
Sbjct: 462 LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKL 521

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +  TY  LI GL   G   +  +   ++   G+ P   TYN +IH YC EG + + F+
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
             ++M       +VVT NTL+ GLC   R+++A +L +     G   +VITYN LI   C
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALC 641

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              + D A R F  ++  G  P V TYNVL+ A S+AG S  A  ++ ++ E G      
Sbjct: 642 KDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRF 701

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFS--PDVYTYGVLIHGLCMKGNMKEASKLFN 479
            Y   I S V + +  K  E+ S ++  G +   D  +Y   I  LC+ G +KEA  + +
Sbjct: 702 FYPS-IKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLD 760

Query: 480 SMWETKLEPNDVVYNMMIFGYCK 502
            M +  +  ++  Y  ++ G  K
Sbjct: 761 EMMQKGMSVDNSTYITLMEGLIK 783



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 12/364 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++IDA  K+    +A     +M+ SG++  + T N+LL  + K   +++   L  +  
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPP 482

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +     D  S+G ++    +      A  + +++ +   +P++  Y +LI G    G + 
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLT 542

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A     ++ E+GLV    TY ++I    K G  +  F+F+ KM  N   P + T N L+
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G++ +  KLF+    +    +V+TYNTLI  LCK+  V  A R    M++ G+ 
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ 662

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ------SPSVVTYNVLIRAFSKAGNS 401
           P+V TYN L+    +AG + +A ++ ++L  +G+       PS+ +    + A     + 
Sbjct: 663 PDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSS---VEAVETGKDP 719

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           ++ SD+      +G    + +Y   I        +++A  +   M + G S D  TY  L
Sbjct: 720 EVKSDIESVGNTQG--DDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITL 777

Query: 462 IHGL 465
           + GL
Sbjct: 778 MEGL 781



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 43/289 (14%)

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           + P   LC   ++      P   +  Y ++I          +A+   +++++ G+ P   
Sbjct: 504 YKPEPALCLWDEMIKRKLTPSIST--YNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDT 561

Query: 143 TFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           T+N ++    K    +K + F +   EN  K   DV +   L+ G C  G L KA ++  
Sbjct: 562 TYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP--DVVTCNTLMNGLCLYGRLEKAMKLFE 619

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
              E G   +V+ Y +LI   CK+ D++ A   F  +   GL     TY VL+  L + G
Sbjct: 620 SWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAG 679

Query: 260 LQKDGFEFYEKMQLNG------VSPSLYT------------------------------Y 283
              +  +   K+  +G        PS+ +                              Y
Sbjct: 680 RSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESY 739

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           N  I E C  G++ E   + DEM  + ++ +  TY TL+ GL K  + Q
Sbjct: 740 NKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQ 788


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 239/473 (50%), Gaps = 17/473 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL +FHQM ++  RP   TF +L+  + +     +            ++   
Sbjct: 161 VEDRVS-EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    PNVVIY+++ID  CK+G    A+ LF 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G+     TY  +I G   +G   D  +  ++M    +SP + TYN LI+ +  EG
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L+DEM  R +  N +TYN++I G CK+ R+  AE +   M   G SP+V T+ 
Sbjct: 340 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 399

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C A   D    L +++   G   + VTYN LI  F   G+   A DL ++M   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 459

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIH 463
           G+ P  VT   L+D    +  ++ A EM+  MQKS           G  PDV TY +LI 
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL  +G   EA +L+  M    + P+ + Y+ MI G CK+     A ++   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           N+ ++++ I   C+ G+  +   L  +M + G+     +Y  L   +R   NI
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 632



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 226/457 (49%), Gaps = 13/457 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           + A+  F  ML S   P    F  L+  V++    D     + +  R ++  D+YSF IL
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C    L  A     ++ ++G  P+VV +T+L+ G C    +  A   F ++ E   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T+T L+ GL + G   +     ++M  +G+ P+  TY  ++   C +G       
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV Y+ +I  LCK+ R  +A+ L  +M+  GI P++ TYN +I GF
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A +L  ++     SP VVTYN LI AF K G    A++L  EM  RGI P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 360

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  +ID F + D ++ A +M+ LM   G SPDV+T+  LI G C    + +  +L + 
Sbjct: 361 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L  N V YN +I G+C  G+   AL L  +M   G+ P+I + ++ +  LC +GK
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 517



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 220/451 (48%), Gaps = 18/451 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+D   K   +  AL    +M + S + P    +++++  + K          F+E 
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D++++  +I G C +G  + A ++L ++ E   SP+VV Y +LI+   K G  
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++   G++    TY  +I G  K        + +  M   G SP ++T+  L
Sbjct: 342 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 401

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   ++ +G +L  EM  R +  N VTYNTLI G C    +  A  L  QM  +G+
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            P+++T N L+DG CD G+   A  +F  ++            NG  P V+TYN+LI   
Sbjct: 462 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L  EM  RGI P  +TY+ +ID   +   +++A +M+  M    FSP+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 581

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  LI+G C  G + +  +LF  M    +  + ++Y  +I+G+ K GN   AL +  E
Sbjct: 582 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 641

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           M   G+ P+  +  + +      G W + E+
Sbjct: 642 MISSGVYPDTITIRNML-----TGFWSKEEL 667



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 178/353 (50%), Gaps = 12/353 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I+A +K     +A   + +ML  G+ P + T+NS++    K    D    +F+   
Sbjct: 328 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV++F  LI G C A  ++   E+L+++   G   N V Y +LI G C  GD+ 
Sbjct: 388 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNGV 276
            A  L +++   G+     T   L+ GL  NG  KD  E ++ MQ            NGV
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI    NEGK  E  +L++EM HR +  + +TY+++I GLCK+ R+ EA +
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +   M     SPNV+T+N LI+G+C AG  D    LF ++   G     + Y  LI  F 
Sbjct: 568 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           K GN   A D+ +EM   G+ P  +T   ++  F   +++E+A  M   +Q S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 183/385 (47%), Gaps = 12/385 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I     S     A     +ML+  + P   T+N+L+   +K   F +    + E  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G C+   L+ A ++   +   G SP+V  +T+LIDG C    I+
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  ++   GLVA   TY  LI G    G      +  ++M  +GV P + T N L+
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAER 336
              C+ GK+ +  ++F  M+  +           V  +V+TYN LICGL  E +  EAE 
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M   GI P+ ITY+ +IDG C     D+A ++F  + S   SP+VVT+N LI  + 
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG      +L  EM  RGI    + Y  LI  F +  ++  A +++  M  SG  PD  
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM 481
           T   ++ G   K  ++ A  +   +
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 197/422 (46%), Gaps = 12/422 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K      A   F +M + G+ P   T+NS+++    S  +        E 
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV ++  LI    + G   +A E+ +++   G  PN + Y S+IDG CK   +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      T+T LI G        DG E   +M   G+  +  TYN L
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-- 344
           IH +C  G ++    L  +M    V  ++VT NTL+ GLC   ++++A  +   M+ +  
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 345 ---------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                    G+ P+V+TYN LI G  + G+  +A  L+ ++   G  P  +TY+ +I   
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A+ +   M  +  +P+ VT+  LI+ + ++  ++   E++  M + G   D 
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 616

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             Y  LI+G    GN+  A  +F  M  + + P+ +    M+ G+  +    RA+ +L +
Sbjct: 617 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676

Query: 516 MN 517
           + 
Sbjct: 677 LQ 678



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +VV +  L+  + +  R      L  +M+   I  ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI  FC   +   A   F ++   G  P VVT+  L+           A D   +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P   TYG ++ G+C KG+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+Y+ +I   CK+G    A  L  EM EKG+ P++ +Y+S I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  YN L  A
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 36/246 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF+ +  +   PSVV +  L+    +     +   L ++ME +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I     ++ ILI  F     +  A   +  + K G  PDV T+  L+HGLC++  + EA
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------------- 521
              F+ M+ET   PN V +  ++ G C+EG    A+ LL  M E GL             
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 522 -----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
                                  +PN+  YS+ I  LC+DG+  +A+ L  +M + G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 559 SVSLYN 564
            +  YN
Sbjct: 289 DLFTYN 294


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 160/547 (29%), Positives = 275/547 (50%), Gaps = 51/547 (9%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           L+     +P   + +L    SR G  H  Q      RL+LS   S S   A TL + + S
Sbjct: 113 LLDHRVPVPASASNALLAVLSRAGWPHLAQEA---YRLVLS---SDSEVNAYTLNIMVHS 166

Query: 76  GRITSSSFTPRSLLCHLTQ--LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
              T       +++  + +  +FP   + VT    +  +IDA  ++   D A+     M 
Sbjct: 167 YCKTLEFDGADTVISEMEKRCVFP---DVVT----HNVLIDARFRAGDVDAAIALVDSMA 219

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           + G++P   T+NS+L  + K   FDK   +F + ++C V  DV SF ILI G C  G++ 
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A +   +++    +P+VV ++ LI    + G+++ A    R++  LGLV     YT++I
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 253 CGLFK------------------------------NGLQK-----DGFEFYEKMQLNGVS 277
            G  +                              NGL K     D  +   +M+  GV+
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L T+  LIH YC +G      +LFD +  + +  +VVTYN+LI G+C++  + +A  L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            D M    I PN ITY+ LID  C+ G+ + AF   +++   G  P++ TYN +I+ + +
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +GN K     +++M +  + P  +T+  LI  +++ ++M  AF ++++M+K    PD  T
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT 579

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y ++I+G   +GNM++A ++F  M ++ +EP+   Y  +I G+   GNS +A +L  EM 
Sbjct: 580 YNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639

Query: 518 EKGLVPN 524
            +G  P+
Sbjct: 640 HRGFAPD 646



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 261/506 (51%), Gaps = 20/506 (3%)

Query: 67  QTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
           Q+L+L++   R  S      SLL         +S+P  + ++++ +I  + +SR   +A 
Sbjct: 57  QSLLLRMSRRRGASRREIVSSLL---------ASSPTPQPQVFDLLIRTYTQSRKPREAF 107

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFGI 180
             F  +LD  V   ++  N+LL  + ++     GW   ++   ++      E++ Y+  I
Sbjct: 108 EAFRLLLDHRVPVPASASNALLAVLSRA-----GWPHLAQEAYRLVLSSDSEVNAYTLNI 162

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++   C+  + + A  V++++E+    P+VV +  LID   + GD++ A  L   +   G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L     TY  ++ GL K+       E +  M    V+P + ++N LI  +C  G+V E  
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K + EM+HR V  +VV+++ LI    +   +  A   L +MK  G+ P+ + Y  +I GF
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG   +A R+ +++   G  P VVTYN L+    K      A  L+ EMEERG+TP  
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            T+T LI  + R  + E A +++  + +    PDV TY  LI G+C KG++ +A++L++ 
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M   ++ PN + Y+++I  +C++G    A   L EM +KG +PNI +Y+S I   C+ G 
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + +  L +M +  + P +  +N L
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTL 548



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 192/368 (52%), Gaps = 1/368 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILI 182
           +A+ ++ +M    V P   +F+ L+    +    D    +  E +   +  D   + ++I
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C AG +++A  V +++   G  P+VV Y +L++G CK   +  A+ L  ++ E G+ 
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               T+T LI G  + G  ++  + ++ +    + P + TYN LI   C +G +++  +L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           +D+M  RE+  N +TY+ LI   C++ +V++A   LD+M   G  PN+ TYN +I G+C 
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           +G   K  +   +++ +   P ++T+N LI  + K  N   A ++   ME+  + P  VT
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT 579

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y ++I+ F    +M+ A  ++  M  SG  PD YTY  LI+G    GN K+A +L + M 
Sbjct: 580 YNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639

Query: 483 ETKLEPND 490
                P+D
Sbjct: 640 HRGFAPDD 647


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 237/448 (52%), Gaps = 3/448 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +   +   +A+    QM     +P + TFN+L+  +F+    S     +     R
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D++++G ++ G C+ GD++ A  +L ++E+     +VVIYT++ID  C   ++  
Sbjct: 215 -GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G+     TY  LI  L   G   D       M    ++P++ T++ LI 
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TYN LI GFC A   ++   LF ++   G   + VTYN LI+   +AG+  MA  + 
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M   G+ P  +TY+IL+D   +   +EKA  ++  +QKS   PD+YTY ++I G+C  
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++   LF S+    ++PN ++Y  MI G+C++G    A  L  EM E G +PN  +Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I    +DG    +  L+ +M   G 
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGF 601



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 215/394 (54%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G       ++A  +++++   G  P++  Y ++++G CK GDI+ A  L +K+
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +  + A    YT +I  L       D    + +M   G+ P++ TYN LI   CN G+ 
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           S+  +L  +M  R++  NVVT++ LI    KE ++ EAE+L D+M    I P++ TY+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+GFC     D+A  +F  + S    P+VVTYN LI+ F KA   +   +L REM +RG+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + VTY  LI    ++ D + A +++  M   G  PD+ TY +L+ GLC  G +++A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  + ++K+EP+   YN+MI G CK G       L   ++ KG+ PN+  Y++ I   C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           + G   EA+ L  +M + G  P+   YN L RA+
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 219/448 (48%), Gaps = 7/448 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSF 178
           D A+  F +M+ S   P    FN LL  + K   FD   L  S        ++  D+YS+
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD---LVISLGERMQNLRISYDLYSY 118

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            ILI   C    L  A  VL ++ ++G+ P++V  +SL++G C    I  A  L  ++  
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           +       T+  LI GLF +    +     ++M   G  P L+TY  +++  C  G +  
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              L  +M   ++  +VV Y T+I  LC    V +A  L  +M   GI PNV+TYN LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C+ G    A RL + +     +P+VVT++ LI AF K G    A  L  EM +R I P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
              TY+ LI+ F   D +++A  M+ LM      P+V TY  LI G C    ++E  +LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  L  N V YN +I G  + G+   A ++  +M   G+ P+I +YS  +  LC+ 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           GK  +A V+   + K  ++P +  YNI+
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIM 506



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 221/454 (48%), Gaps = 4/454 (0%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + Q+F     P T +  + ++I        + +A+    +M+  G +P   T+ +++  +
Sbjct: 173 VDQMFVMEYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 152 IKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D    L     + K+E DV  +  +I   C   ++N A  +  +++  G  PNV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y SLI   C  G    A  L   + E  +     T++ LI    K G   +  + Y++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M    + P ++TY+ LI+ +C   ++ E   +F+ M  ++   NVVTYNTLI G CK  R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V+E   L  +M   G+  N +TYN LI G   AG+ D A ++F ++ S+G  P ++TY++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+    K G  + A  +   +++  + P   TY I+I+   ++  +E  ++++  +   G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V  Y  +I G C KG  +EA  LF  M E    PN   YN +I    ++G+   + 
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+ EM   G V + ++ S  I +L  DG+  ++
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 136/275 (49%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF EM       ++V +N L+  + K  +      L ++M+   IS ++ +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+ FC   +   A  +  ++   G  P +VT + L+  +        A  LV +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P+ VT+  LI      +   +A  +   M   G  PD++TYG +++GLC +G++  A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M + K+E + V+Y  +I   C   N   AL L  EM+ KG+ PN+ +Y+S I  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC  G+W +A  LL+ M++  + P+V  ++ L  A
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D   K    ++AL  F  +  S + P   T+N ++  + K+   + GW LF S +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V  +  +I G C  G   +A  +  +++E G  PN   Y +LI    ++GD  
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            +  L +++   G V    T +++I  L    L+K   E
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 223/442 (50%), Gaps = 7/442 (1%)

Query: 129 FHQMLDSGVR---PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGC 185
            H + D  VR   P + T   LL  ++KS   +K   F  +   K   D+ +F I I G 
Sbjct: 1   MHTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGL 60

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C A  +  A  V + + + GF PN + Y +L+ G C  G +  A+ L+ ++ + G     
Sbjct: 61  CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY  L+ G  K G   +  + ++     G  P + TYN LI+ +C   K+ E  ++   
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC-DAG 364
           M    +  +VVTYN+L+ GLCK  RV EA  L+      G SPNVITY+ LI G C +  
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 237

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             + A +L  ++  NG  P +V+YN LI   ++      A  L   +  +G  P   TY 
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           ILID  ++ D + +AFE++S + K G  PD  TY V I GLC  G +++A  +   M E 
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+ V +N +I G CKE     A  LL  M  KG  PN  S+++ I   C+ GKW +A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
                +MLK G+KP+V  YNIL
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNIL 439



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 180/544 (33%), Positives = 264/544 (48%), Gaps = 31/544 (5%)

Query: 46  SISIILR-LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR-SLLCHLTQLFPSSS--- 100
           ++ I+LR LL S     +H   + L++K   G    S+F    S LC  +++  + +   
Sbjct: 18  TVGILLRSLLKSGKIEKAHRFVEQLLVK---GLCDISTFNIYISGLCRASRIGDAQTVFD 74

Query: 101 ---------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
                    N +T + L   + +     R+SD    Y  +M+ +G  P   T+N+LL   
Sbjct: 75  GMRKHGFWPNRITYNALLSGLCNG---GRMSDAQALY-ERMIKAGYSPDVVTYNTLLHGF 130

Query: 152 IKSCSFDKGWLFF--SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
            K    D+    F  +  R  V  DV ++  LI G C+A  L++A  +L ++      P+
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVP-DVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ-KDGFEFY 268
           VV Y SL++G CKNG ++ A+ML   I + G      TY+ LI GL +   + +   +  
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           EKM LNG  P + +YN LIH    E  VSE  KLF  +  +     V TYN LI GL KE
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            RV EA  L   +   G+ P+ ITY   IDG C AG  + A  +   +   G  P VV++
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N +I    K      A  L+  ME +G +P+ +++  LI    R+   +KA   +  M K
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 449 SGFSPDVYTYGVLIHGLC---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            G  P V TY +L+ GLC    +G +KEA  LF++M E    P+ V Y+ +I G  K G 
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A RLLG M  KG +PN+ +Y+S I  LC   K  EA  L   M++ G  P    Y  
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 566 LYRA 569
           +  A
Sbjct: 547 IISA 550



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/445 (33%), Positives = 218/445 (48%), Gaps = 6/445 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+   D+A     +M+   + P   T+NSL+  + K+   D+  +   +  
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK- 216

Query: 169 CKVELDVYSFGILIKGCC-EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                +V ++  LI G C E   L  A ++L ++   G  P++V Y +LI G  +   + 
Sbjct: 217 -GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS 275

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  +   G      TY +LI GL K     + FE +  +  +G+ P   TY   I
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V +   +  +M  +    +VV++N +I GLCKE RV EAE LL  M+  G S
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA---GNSKMA 404
           PN I++N LI G C AG+  KA   F ++   G  P+VVTYN+L+    KA   G  K A
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L   M E+G  P  VTY+ LID   ++  ++ A  +   M+  G  P+VYTY  LI G
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    + EA +LF +M E    P+ + Y  +I   CK+    +AL L     E G+VP 
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLN 549
              Y S I  LC   +  EA  LL 
Sbjct: 576 SGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 220/404 (54%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V L+V+S+ ILI+G C AG+L        ++E     PNVV Y ++I   CK   I+ A 
Sbjct: 199 VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAF 258

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L R +G  GL     TY ++I GL + G  ++      +M   G +P   TYN L++ Y
Sbjct: 259 KLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGY 318

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G   +   L  EM    +  +VVTY +LI  +CK   +  A    DQM + G+ PN 
Sbjct: 319 CKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  LI+GF   G  D+A+R+++++  +G  P++VTYN L+     +G  + A  L+R 
Sbjct: 379 VTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ME +G++P  V+Y+ +I  F R  ++++AF+M + M + G SPD  TY  LI GLC +  
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA  LF  M    L P++  Y  +I GYCKEG+   AL L  EM +KG +P+  +Y+ 
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            I  L +  +  EA+ LL ++      P+   Y+ L  + ++IE
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIE 602



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 245/482 (50%), Gaps = 51/482 (10%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           +  L +F +M  +   P   T+N+++    K    D+ + L  S     +E ++ ++ ++
Sbjct: 220 EMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMV 279

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C  G + +   VL +++  GF+P+ V Y +L++G CK G+  +A +L  ++   GL
Sbjct: 280 INGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGL 339

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TYT LI  + K G      EF+++M + G+ P+  TY  LI+ +  +G + E ++
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           ++DEM        +VTYN L+ G C   R++EA  LL  M+  G+SP+V++Y+ +I GFC
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFC 459

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              E D+AF++  ++   G SP  +TY+ LI+   +      A DL +EM  + + P E 
Sbjct: 460 RYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEF 519

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL---------------- 465
           TYT LI+ + +  D+ +A  ++  M K GF PD  TY VLI+GL                
Sbjct: 520 TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579

Query: 466 ----------------------------------CMKGNMKEASKLFNSMWETKLEPNDV 491
                                             CMKG M EA ++F SM +   +PN+ 
Sbjct: 580 FYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEA 639

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN++I G+C++GN ++A +L  EM + G +P+  +  + +  L  +G   +  +++  +
Sbjct: 640 VYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDI 699

Query: 552 LK 553
           L+
Sbjct: 700 LR 701



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 212/390 (54%), Gaps = 1/390 (0%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK-NGDIERAKMLFRKI 236
           F +++K C     + KA  +++  +  GF P V+ Y +++D   +    +  A+ ++R++
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     +Y +LI G    G  + G  F+E+M+ N   P++ TYN +I  YC   ++
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E FKL   M    +  N++TYN +I GLC+  R++E   +L +M   G +P+ +TYN L
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ++G+C  G   +A  L +++  NG  P VVTY  LI    KAGN   A +   +M  RG+
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ VTYT LI+ F +   M++A+ ++  M +SGF P + TY  L++G C+ G M+EA  
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   M    L P+ V Y+ +I G+C+     RA ++  EM EKG+ P+  +YSS I  LC
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  EA  L  +ML   L P    Y  L
Sbjct: 495 EQRRLNEACDLFQEMLNKSLLPDEFTYTSL 524



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 147/327 (44%), Gaps = 16/327 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++ H  S   ++A+     M   G+ P   ++++++    +    D+ +   +E  
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  D  ++  LI+G CE   LN+A ++  ++      P+   YTSLI+G CK GD+ 
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-----FYEKMQLNGVSPSLYT 282
            A  L  ++ + G +    TY VLI GL K    ++        FY++   NG++     
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595

Query: 283 YNC----------LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +C          LI  +C +G ++E  ++F+ M  R    N   YN +I G C++  V 
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVH 655

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A +L  +M   G  P+ +T   L+      G  ++   +   +  + +         L+
Sbjct: 656 KAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALV 715

Query: 393 RAFSKAGNSKMASDLVREMEERGITPS 419
           +   K GN     +L+ EM + G  PS
Sbjct: 716 QINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 230/433 (53%), Gaps = 1/433 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIK 183
           A   F ++L  G  P + TF +L   +       + +LF  +        D  S+G LI 
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C+ G+   A ++L +++     PNVV+Y ++ID  CK   +  A  LF ++   G+  
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY+ LI G    G  KD  + + KM L  + P +YT+N L++ +C +GK+ EG  +F
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  + +  N VTYN+L+ G C    V +A+ + + M   G++P++ +Y+ +I+GFC  
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            + D+A  LF ++      P VVTY+ LI   SK+G    A  LV +M +RG+ P+  TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY 438

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             ++D+  ++  ++KA  + +  +  GF PD+ TY +LI GLC  G +++A K+F  +  
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLV 498

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
                +   Y +MI G+C EG    AL LL +M + G +P+  +Y   I  L +  +   
Sbjct: 499 KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558

Query: 544 AEVLLNQMLKLGL 556
           AE LL +M+  GL
Sbjct: 559 AEKLLREMIARGL 571



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 229/449 (51%), Gaps = 3/449 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGI 180
           D A+  F+++L     P +  FN +L  ++KS  +    L+ S+      ++ ++ +  I
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHY-HTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI   C+ G +  AF V  ++ +MG+ P+ + +T+L  G C  G I++A +   K+  LG
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
               Q +Y  LI GL K G  +   +  +++  N V P++  YN +I   C    V+E F
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LF EM  + ++ +VVTY+ LI G C   ++++A  L ++M +  I P+V T+N L++ F
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+  +   +F+ +   G  P+ VTYN L+  +        A  +   M + G+ P  
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            +Y+I+I+ F +    ++A  ++  M +    PDV TY  LI GL   G +  A +L + 
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  + PN   YN ++   CK     +A+ LL +  +KG  P+I++YS  I  LCQ GK
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +A  +   +L  G    V  Y I+ + 
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQG 514



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 188/380 (49%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D++ A  + N+L     +P    +  ++    K+        L +K+   G+        
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI    + GL    F  + K+   G  P   T+  L    C +G++ + F   D++   
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               + ++Y TLI GLCK    + A  LL ++    + PNV+ YN +ID  C     ++A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F LF+++ S G SP VVTY+ LI  F   G  K A DL  +M    I P   T+ IL+++
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +   M++   ++ +M K G  P+  TY  L+ G C+   + +A  +FN+M +  + P+
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y++MI G+CK      A+ L  EM+ K ++P++ +YSS I  L + G+   A  L++
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           QM   G+ P++  YN +  A
Sbjct: 425 QMHDRGVPPNICTYNSILDA 444



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 36/383 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID+  K +L ++A   F +M+  G+ P   T+++L+  F I     D   LF   
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++ DVY+F IL+   C+ G + +   V + + + G  PN V Y SL+DG C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +AK +F  + + G                                   V+P + +Y+ +
Sbjct: 347 NKAKSIFNTMAQGG-----------------------------------VNPDIQSYSIM 371

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +C   K  E   LF EM  + +  +VVTY++LI GL K  R+  A +L+DQM   G+
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN+ TYN ++D  C   + DKA  L  + K  G  P + TY++LI+   ++G  + A  
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  ++  +G       YTI+I  F       +A  + S M+ +G  PD  TY ++I  L 
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551

Query: 467 MKGNMKEASKLFNSMWETKLEPN 489
            K     A KL   M    L  N
Sbjct: 552 KKDENDMAEKLLREMIARGLPLN 574



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 123/267 (46%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F+ + +     N ++Y++          V +A  L +++     +P    +NK++     
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           +        L  +++  G  P++V  N+LI  F + G    A  +  ++ + G  P  +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +T L         +++AF  +  +   GF  D  +YG LIHGLC  G  + A  L   + 
Sbjct: 158 FTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++PN V+YN +I   CK      A  L  EM  KG+ P++ +YS+ I   C  GK  
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLK 277

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A  L N+M+   +KP V  +NIL  A
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNA 304


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 214/397 (53%), Gaps = 2/397 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E DV ++  +I G C+ G + +A E++ ++ E G +P+V  YT ++D  C+ G ++ A  
Sbjct: 7   EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF K+ E G  A    Y  LI GL K+   +  ++  E+M   G  P   TYN ++   C
Sbjct: 67  LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPN 349
             GKVSE  + FD M  R  + +VV YN L+  L KE +V EA  L   M MA   ++P+
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           +ITYN LIDGFC   +TD+A +LF  + + G  P  VTYN ++   ++  N   A ++ +
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M + G  P+  TY+I++    R  +M +  E+Y  M +  FSPDV     +I  LC   
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + +A K+   M +    P+ V YN+++ G CK     +A  L   M + G  P+I SYS
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +  LC+  K  +A VL ++M++  L P V  +NIL
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 403



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 240/473 (50%), Gaps = 38/473 (8%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M + G  P   T+++++  + K+    +      E   K V  DV ++ I++   C AG 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++A E+ +++ E G S N V Y +LI+G CK+ +IERA  L  ++   G      TY  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD--EMRH 308
           ++ GL + G   +  +F++ M   G SP +  YN L+     EGKV+E + LF   +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R+VA +++TYNTLI G C+  +  EA +L   +   G  P+ +TYN ++ G       D+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-------------- 414
           A  +F ++  +G +P+  TY++++    + GN     +L  EM E+              
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 415 ---------------------GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
                                G  P  VTY IL+D   +++ ++KA E++S M  +G +P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ +Y V+++GLC    + +A  LF+ M E KL P+ V +N+++ G CK G    A  LL
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             M+E  ++P+  + ++ +  LC+D +  EA  L   M++ G    V  +NI+
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIV 473



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 250/534 (46%), Gaps = 44/534 (8%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           IISG   +   T    L  + ++     NP   +  Y  I+D   ++   D+A   FH+M
Sbjct: 16  IISGLCKTGKVT--EALEMVEEMTEKGVNPDVAT--YTIIVDRLCRAGKVDEADELFHKM 71

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDL 191
           ++ G    +  +N+L+  + K  + ++ +    E   K  E D  ++  ++ G C  G +
Sbjct: 72  IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131

Query: 192 NKAFEVLNQLEEMGFSPNVV-------------------------------------IYT 214
           ++A +  + +   G+SP+VV                                      Y 
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +LIDG C+    + A  LF+ +   G +    TY  ++ GL +     +  E ++KM  +
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G +P+  TY+ ++  +C  G ++   +L++EM  +  + +V+  N +I  LCK  +V +A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            ++L++M   G  P+V+TYN L+DG C     DKA  LF+ +  NG +P +V+Y+V++  
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K      A  L   M ER + P  VT+ IL+D   ++  +++A ++  +M +    PD
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T   L+HGLC      EA +LF  M E     + + +N+++ G C+EG   +AL    
Sbjct: 432 GVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFK 491

Query: 515 EM--NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            M  ++    P++ +Y++ +  L + G+  +A     QM   G  P    YN L
Sbjct: 492 SMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTL 545



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 202/457 (44%), Gaps = 42/457 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y +I+    +     +A  +F  M   G  P    +N LL  + K     + W  F    
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             +R KV  D+ ++  LI G C     ++A ++   +   G+ P+ V Y S++ G  +  
Sbjct: 178 MADR-KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +++ A+ +F+K+ + G      TY++++ G  + G      E YE+M     SP +   N
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I   C   KV +  K+ +EM       +VVTYN L+ GLCK   V +A  L   M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P++++Y+ +++G C   +   A  LF+++      P VVT+N+L+    KAG    A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG-------------- 450
            DL+  M E  + P  VT T L+    R    ++A  ++  M + G              
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 451 -----------------------FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                                  FSPDV TY  L++ L   G + +A   F  M  +   
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           P+ V YN ++ G  K+G   +A RL   M EKG + +
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 185/388 (47%), Gaps = 42/388 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++ID   +   +D+A+  F  ++  G  P + T+NS+L+ + +  + D+    F    
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 249

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           ++ C      YS  I++ G C  G++ +  E+  ++ E  FSP+V++  ++ID  CK   
Sbjct: 250 DSGCAPNGATYS--IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +  ++ ++G V    TY +L+ GL K  L     E +  M  NG +P + +Y+ 
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +++  C   KV +   LFD M  R++  +VVT+N L+ GLCK  ++ EA+ LLD M    
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLF-------------------------------- 373
           + P+ +T   L+ G C    TD+A RLF                                
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487

Query: 374 ----NQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
               + +KS+G+ SP VVTY  L+ A  +AG    A D  ++M   G  P  V Y  L++
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
              +     +A  +   M++ GF  D +
Sbjct: 548 GLRKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 156/359 (43%), Gaps = 34/359 (9%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A  +F      G      + SI+L       S H         L++    +T   F+P 
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVL-------SGHCRVGNMARCLELYE-EMTEKRFSPD 291

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            LLC+                   ++ID   K++  D A     +M   G  P   T+N 
Sbjct: 292 VLLCN-------------------AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNI 332

Query: 147 LLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           LL  + K+   DK    FS   +N C    D+ S+ +++ G C+   ++ A  + +++ E
Sbjct: 333 LLDGLCKTNLVDKAHELFSTMVDNGCAP--DIVSYSVVLNGLCKTNKVHDARVLFDRMIE 390

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
               P+VV +  L+DG CK G ++ AK L   + E  ++    T T L+ GL ++    +
Sbjct: 391 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDE 450

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM--RHREVACNVVTYNTL 321
               ++ M   G    +  +N ++   C EGK+++    F  M     E + +VVTY TL
Sbjct: 451 AVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTL 510

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           +  L +  RV +A     QM  +G +P+ + YN L++G    G   +A RL   +K  G
Sbjct: 511 VNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+G  P  VTY+ +I    ++  + +A EM   M + G +PDV TY +++  LC  G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA +LF+ M E     N V YN +I G CK+ N  RA +LL EM  KG  P+  +Y++
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  LC+ GK  EA+   + M   G  P V  YN L  A
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA 159


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 242/457 (52%), Gaps = 8/457 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
           +S+LS  AL    +M+  G  P   T +SLL     S           +    VE+    
Sbjct: 131 RSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ---MVEMGYKP 186

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F  LI G       ++A  +++Q+ + G  P++V Y ++++G CK GDI+ A  L 
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ +  + A    Y  +I GL K     D    + +M   G+ P ++TY+ LI   CN 
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  R++  NVVT++ LI    KE ++ EAE+L D+M    I P++ TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + LI+GFC     D+A  +F  + S    P+VVTY+ LI+ F KA   +   +L REM +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  + VTYT LI  F ++ D + A  ++  M   G  P++ TY +L+ GLC  G + +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  +  + +EP+   YN+MI G CK G       L   ++ KG+ PN+ +Y++ I 
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
             C+ G   EA+ LL +M + G  P+   YN L RA+
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 241/453 (53%), Gaps = 3/453 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +  S+    A+    QM++ G +P + TF +L+  +F+    S +   L     +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS-EAVALVDQMVQ 216

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D+ ++G ++ G C+ GD++ A  +L ++E+     +VVIY ++IDG CK   ++ 
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G+     TY+ LI  L   G   D       M    ++P++ T++ LI 
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TY+ LI GFC A   ++   LF ++   G   + VTY  LI  F +A +   A  + 
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M   G+ P+ +TY IL+D   ++  + KA  ++  +Q+S   PD+YTY ++I G+C  
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++  +LF ++    + PN + YN MI G+C++G+   A  LL +M E G +PN  +Y
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           ++ I    +DG    +  L+ +M   G     S
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 227/456 (49%), Gaps = 6/456 (1%)

Query: 117 LKSRLSD-----QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-K 170
           L++RLSD      A+  F  M+ S   P    FN LL  V K   F+       + +   
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D+Y++ I I   C    L+ A  VL ++ ++G+ P++V  +SL++G C +  I  A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ E+G      T+T LI GLF +    +     ++M   G  P L TY  +++  
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +     L  +M   ++  +VV YNT+I GLCK   + +A  L  +M   GI P+V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY+ LI   C+ G    A RL + +     +P+VVT++ LI AF K G    A  L  E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M +R I P   TY+ LI+ F   D +++A  M+ LM      P+V TY  LI G C    
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++E  +LF  M +  L  N V Y  +I G+ +  +   A  +  +M   G+ PNI +Y+ 
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  LC++GK  +A V+   + +  ++P +  YNI+
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 188/362 (51%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K +  D AL  F +M + G+RP   T++SL+  +   C++    D   L 
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL---CNYGRWSDASRLL 316

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  +V +F  LI    + G L +A ++ +++ +    P++  Y+SLI+G C +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY+ LI G  K    ++G E + +M   G+  +  TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LIH +           +F +M    V  N++TYN L+ GLCK  ++ +A  + + ++ 
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P++ TYN +I+G C AG+ +  + LF  L   G SP+V+ YN +I  F + G+ + 
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+++M+E G  P+  TY  LI + +R  D E + E+   M+  GF+ D  T G++ +
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616

Query: 464 GL 465
            L
Sbjct: 617 ML 618



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 154/301 (51%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+MQ  G+S  LYTY+  I+ +C   ++S    +  +M       ++VT ++L+ G C  
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ +A  L+DQM   G  P+  T+  LI G     +  +A  L +Q+   G  P +VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             ++    K G+  +A  L+++ME+  I    V Y  +ID   +   M+ A  +++ M  
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  PDV+TY  LI  LC  G   +AS+L + M E K+ PN V ++ +I  + KEG    
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L  EM ++ + P+I +YSS I   C   +  EA+ +   M+     P+V  Y+ L +
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406

Query: 569 A 569
            
Sbjct: 407 G 407



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 142/275 (51%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           KV +   LF +M       ++V +N L+  + K  + +    L +QM+  GIS ++ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             I+ FC   +   A  +  ++   G  P +VT + L+  +  +     A  LV +M E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P   T+T LI      +   +A  +   M + G  PD+ TYG +++GLC +G++  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M + K+E + V+YN +I G CK  +   AL L  EM+ KG+ P++ +YSS I  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC  G+W +A  LL+ M++  + P+V  ++ L  A
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 36/190 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I    ++R  D A   F QM+  GV P   T+N LL  + K+    K  + F    
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495

Query: 168 RCKVELDVYSFGILIKG-----------------------------------CCEAGDLN 192
           R  +E D+Y++ I+I+G                                    C  G   
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  +L +++E G  PN   Y +LI    ++GD E +  L +++   G      T  ++ 
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615

Query: 253 CGLFKNGLQK 262
             L    L K
Sbjct: 616 NMLHDGRLDK 625


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 237/448 (52%), Gaps = 3/448 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +   +   +A+    QM     +P + TFN+L+  +F+    S     +     R
Sbjct: 139 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 198

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D++++G ++ G C+ GD++ A  +L ++E+     +VVIYT++ID  C   ++  
Sbjct: 199 -GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 257

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G+     TY  LI  L   G   D       M    ++P++ T++ LI 
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      P
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TYN LI GFC A   ++   LF ++   G   + VTYN LI+   +AG+  MA  + 
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M   G+ P  +TY+IL+D   +   +EKA  ++  +QKS   PD+YTY ++I G+C  
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++   LF S+    ++PN ++Y  MI G+C++G    A  L  EM E G +PN  +Y
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 557

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I    +DG    +  L+ +M   G 
Sbjct: 558 NTLIRARLRDGDKAASAELIKEMRSCGF 585



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 215/394 (54%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G       ++A  +++++   G  P++  Y ++++G CK GDI+ A  L +K+
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +  + A    YT +I  L       D    + +M   G+ P++ TYN LI   CN G+ 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           S+  +L  +M  R++  NVVT++ LI    KE ++ EAE+L D+M    I P++ TY+ L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+GFC     D+A  +F  + S    P+VVTYN LI+ F KA   +   +L REM +RG+
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + VTY  LI    ++ D + A +++  M   G  PD+ TY +L+ GLC  G +++A  
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 470

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  + ++K+EP+   YN+MI G CK G       L   ++ KG+ PN+  Y++ I   C
Sbjct: 471 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 530

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           + G   EA+ L  +M + G  P+   YN L RA+
Sbjct: 531 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 564



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 219/448 (48%), Gaps = 7/448 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSF 178
           D A+  F +M+ S   P    FN LL  + K   FD   L  S        ++  D+YS+
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD---LVISLGERMQNLRISYDLYSY 102

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            ILI   C    L  A  VL ++ ++G+ P++V  +SL++G C    I  A  L  ++  
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           +       T+  LI GLF +    +     ++M   G  P L+TY  +++  C  G +  
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              L  +M   ++  +VV Y T+I  LC    V +A  L  +M   GI PNV+TYN LI 
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C+ G    A RL + +     +P+VVT++ LI AF K G    A  L  EM +R I P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
              TY+ LI+ F   D +++A  M+ LM      P+V TY  LI G C    ++E  +LF
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  L  N V YN +I G  + G+   A ++  +M   G+ P+I +YS  +  LC+ 
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           GK  +A V+   + K  ++P +  YNI+
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIM 490



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 221/454 (48%), Gaps = 4/454 (0%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + Q+F     P T +  + ++I        + +A+    +M+  G +P   T+ +++  +
Sbjct: 157 VDQMFVMEYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 152 IKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D    L     + K+E DV  +  +I   C   ++N A  +  +++  G  PNV
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y SLI   C  G    A  L   + E  +     T++ LI    K G   +  + Y++
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M    + P ++TY+ LI+ +C   ++ E   +F+ M  ++   NVVTYNTLI G CK  R
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V+E   L  +M   G+  N +TYN LI G   AG+ D A ++F ++ S+G  P ++TY++
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+    K G  + A  +   +++  + P   TY I+I+   ++  +E  ++++  +   G
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V  Y  +I G C KG  +EA  LF  M E    PN   YN +I    ++G+   + 
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 574

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+ EM   G V + ++ S  I +L  DG+  ++
Sbjct: 575 ELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 607



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 136/275 (49%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF EM       ++V +N L+  + K  +      L ++M+   IS ++ +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+ FC   +   A  +  ++   G  P +VT + L+  +        A  LV +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P+ VT+  LI      +   +A  +   M   G  PD++TYG +++GLC +G++  A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M + K+E + V+Y  +I   C   N   AL L  EM+ KG+ PN+ +Y+S I  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC  G+W +A  LL+ M++  + P+V  ++ L  A
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 318



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D   K    ++AL  F  +  S + P   T+N ++  + K+   + GW LF S +
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V  +  +I G C  G   +A  +  +++E G  PN   Y +LI    ++GD  
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 571

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            +  L +++   G V    T +++I  L    L+K   E
Sbjct: 572 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 610


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 232/435 (53%), Gaps = 1/435 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIK 183
           A   F ++L  G  P + TF +L+  +       + +LF  +        D  S+G LI 
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C+ G+   A ++L +++     PNVV+Y ++ID  CK   +  A  LF ++   G+  
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY+ LI G    G   D  + + KM L  + P +YT+N L++ +C +GK+ EG  +F
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  + +  N VTYN+L+ G C    V +A+ + + M   G++P++ +Y+ +I+GFC  
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            + D+A  LF ++      P VVTY+ LI   SK+G    A  LV +M +RG+ P+  TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             ++D+  +   ++KA  + + ++  G  P++YTY +LI GLC  G +++A K+F  +  
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLV 498

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
                N   Y +MI G+C EG    AL LL +M + G +P+  +Y   I  L +  +   
Sbjct: 499 KGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558

Query: 544 AEVLLNQMLKLGLKP 558
           AE LL +M+  G++P
Sbjct: 559 AEKLLREMIARGVRP 573



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 198/370 (53%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++E  G  PN+V    LI+  C+ G I  A  +F KI ++G V    T+T LI GL   G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             +  F F++K+   G      +Y  LIH  C  G+      L   +    V  NVV YN
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           T+I  +CK   V EA  L  +M   GISP+V+TY+ LI GFC  G+ + A  LFN++   
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P V T+N+L+ AF K G  K    +   M ++GI P+ VTY  L+D +    ++ KA
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             +++ M + G +PD+ +Y ++I+G C      EA  LF  M    + P+ V Y+ +I G
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K G    AL+L+ +M+++G+ P I +Y+S +  LC+  +  +A  LL ++   G++P+
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469

Query: 560 VSLYNILYRA 569
           +  Y+IL + 
Sbjct: 470 MYTYSILIKG 479



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 188/380 (49%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D++ A  + N+L     +P    +  ++    K+        L +K+   G+        
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI    + GL    F  + K+   G  P   T+  LI   C +G++ + F   D++   
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               + ++Y TLI GLCK    + A  LL ++    + PNV+ YN +ID  C     ++A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F LF+++ S G SP VVTY+ LI  F   G    A DL  +M    I P   T+ IL+++
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +   M++   ++ +M K G  P+  TY  L+ G C+   + +A  +FN+M +  + P+
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y++MI G+CK      A+ L  EM+ K ++P++ +YSS I  L + G+   A  L++
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           QM   G+ P++  YN +  A
Sbjct: 425 QMHDRGVPPTIRTYNSILDA 444



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 183/385 (47%), Gaps = 36/385 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID+  K +L ++A   F +M+  G+ P   T+++L+  F I     D   LF   
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++ DVY+F IL+   C+ G + +   V + + + G  PN V Y SL+DG C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +AK +F  + +                                    GV+P + +Y+ +
Sbjct: 347 NKAKSIFNTMAQ-----------------------------------GGVNPDIQSYSIM 371

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +C   K  E   LF EM  + +  +VVTY++LI GL K  R+  A +L+DQM   G+
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P + TYN ++D  C   + DKA  L  +LK  G  P++ TY++LI+   ++G  + A  
Sbjct: 432 PPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARK 491

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   +  +G   +  TYTI+I  F       +A  + S M+ +G  PD  TY ++I  L 
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551

Query: 467 MKGNMKEASKLFNSMWETKLEPNDV 491
            K     A KL   M    + P  +
Sbjct: 552 KKDENDMAEKLLREMIARGVRPRQI 576



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 124/267 (46%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F+ + +     N ++Y++          V +A  L +++     +P    +NK++     
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           +        L  +++  G  P++V  N+LI  F + G    A  +  ++ + G  P  +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +T LI        +++AF  +  +   GF  D  +YG LIHGLC  G  + A  L   + 
Sbjct: 158 FTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++PN V+YN +I   CK      A  L  EM  KG+ P++ +YS+ I   C  GK  
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A  L N+M+   +KP V  +NIL  A
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNA 304


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 290/569 (50%), Gaps = 21/569 (3%)

Query: 16  LISRMAKLPPL-KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII 74
           LI  + K+  L KA  LF+  +  G++   Q+ + ++          +   A  L+++I 
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE---GYYKVQNMEKAYELLIEIK 434

Query: 75  SGRITSSSFTPRSL---LCHLTQLFPSSSNPVTKSRL----------YESIIDAHLKSRL 121
              +T++++   ++   LCH   L  + +N + +  +          Y +I+   +K   
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDL--TRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR 492

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
            ++A+     M D G+ P    +N+++I   K+   ++G  +  E   K ++ +VY++G 
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            I G C AG++  A     ++ + G +PN VI T LIDG CK+G+  +A   FR + + G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++    T++VLI GL KNG  ++    + ++   G+ P ++TY  LI   C EG +   F
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L D+M  + +  N+VTYN LI GLCK   + +A  L D +   G++ N +TY+ +I G+
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +    +AF+LF+ +K  G  P    Y  LI    KAGN++ A  L   M E GI  S 
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-ST 791

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             +  LID F +   + +A+++   M  +  +P+  TY +LI   C  GN+KEA +LF  
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  + PN + Y  ++ GY + G       L  EM  +G+ P+  ++S  +    ++G 
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGN 911

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           W +A  L++ ML  G+    +LY IL  A
Sbjct: 912 WIKALKLVDDMLSEGVNVCKNLYTILIDA 940



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 239/495 (48%), Gaps = 37/495 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID   + + S +      +M   G++P    + +L+   +K       +    E 
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM 363

Query: 168 RC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG------- 219
              K++L+ +++  LI G C+ GDL KA ++ +++  MG  P++  Y  LI+G       
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423

Query: 220 ----------------------------CCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                        C  GD+ RA  LF+++   GL      YT +
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + GL K G  ++  +    M+  G+SP ++ YN +I  +C  GK+ EG     EM  + +
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NV TY   I G C+   +Q AER   +M  +GI+PN +    LIDG+C  G T KAF 
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFA 603

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            F  +   G  P V T++VLI   SK G  + A  +  E+ ++G+ P   TYT LI +  
Sbjct: 604 KFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC 663

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  D++ AFE++  M K G +P++ TY  LI+GLC  G + +A +LF+ + E  L  N V
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+ +I GYCK  N   A +L   M   G+ P+   Y + I   C+ G   +A  L   M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783

Query: 552 LKLGLKPSVSLYNIL 566
           ++ G+  S   +N L
Sbjct: 784 VEEGI-ASTPAFNAL 797



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 275/593 (46%), Gaps = 54/593 (9%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           +I +   + P +    FNW + + +     S   IL L+L       +AA   ++ ++I 
Sbjct: 78  VIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAA--NVLERMID 135

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
            R          + C+      + S+  +   ++E +ID + K    ++A+  F      
Sbjct: 136 TRNPHVKILDSIIKCYKE---INGSSSSSSVVVFEILIDIYRKKGFLNEAVSVF------ 186

Query: 136 GVRPRSNTF-------NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
            +  ++N F       NSL   ++K    +  W  +      +  DVY++  LI   C  
Sbjct: 187 -LGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRV 245

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G + +   VL  +EE G  PN+V Y+ +I G C+ GD++ A  L R +   GL+   + Y
Sbjct: 246 GKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIY 305

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  +     +G    ++M   G+ P    Y  LI+ +  +  +   F++ +EM  
Sbjct: 306 ATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA 365

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF-------- 360
           R++  N  TY  LI GLCK   +++AE L  +M M GI P++ TYN LI+G+        
Sbjct: 366 RKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEK 425

Query: 361 ---------------------------CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
                                      C  G+  +A  LF ++ S G  P++V Y  +++
Sbjct: 426 AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVK 485

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              K G  + A  ++  M+++G++P    Y  +I  F ++  ME+       M   G  P
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +VYTYG  IHG C  G M+ A + F  M ++ + PNDV+   +I GYCK+GN+ +A    
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKF 605

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             M ++G++P++ ++S  I  L ++GK  EA  + +++L  GL P V  Y  L
Sbjct: 606 RCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSL 658



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 234/459 (50%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I    ++   D+AL     M + G+ P +  + +L+    +     +G     E  
Sbjct: 270 YSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMY 329

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D  ++  LI G  +  D+  AF+V  ++       N   Y +LI G CK GD+E
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A+ LF ++  +G+     TY  LI G +K    +  +E   +++   ++ + Y    ++
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C+ G ++   +LF EM    +  N+V Y T++ GL KE R +EA ++L  MK  G+S
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V  YN +I GFC AG+ ++      ++ + G  P+V TY   I  + +AG  + A   
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM + GI P++V  T LID + +  +  KAF  +  M   G  PDV T+ VLIHGL  
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA  +F+ + +  L P+   Y  +I   CKEG+   A  L  +M +KG+ PNI +
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I  LC+ G+  +A  L + + + GL  +   Y+ +
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 195/406 (48%), Gaps = 35/406 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
            +ID + K   + +A   F  MLD GV P   T + L+  + K+    +    FSE   K
Sbjct: 587 DLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK 646

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  DV+++  LI   C+ GDL  AFE+ + + + G +PN+V Y +LI+G CK G+I +A
Sbjct: 647 GLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKA 706

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY------ 283
           + LF  I E GL     TY+ +I G  K+    + F+ +  M+L GV P  + Y      
Sbjct: 707 RELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDG 766

Query: 284 ----------------------------NCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
                                       N LI  +   GK+ E ++L ++M    +  N 
Sbjct: 767 CCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY  LI   C    ++EAE+L  +M+   + PNV+TY  L+ G+   G   + F LF++
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + + G  P  + ++V++ A  K GN   A  LV +M   G+   +  YTILID+  + ++
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           + +  ++   ++K G    + T G L+      G   EA ++  SM
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 198/437 (45%), Gaps = 21/437 (4%)

Query: 139 PRSNTFNSLLIFVI--KSCSFD----KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           P  N  N  ++F++  ++   D     G+  +  +R     ++ +F IL    C +G   
Sbjct: 65  PLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFG 124

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  VL ++ +   +P+V I  S+I               +++I      ++   + +LI
Sbjct: 125 NAANVLERMIDTR-NPHVKILDSIIK-------------CYKEINGSSSSSSVVVFEILI 170

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
               K G   +    +   + N     L   N L  +     +V   +K++  M    V 
Sbjct: 171 DIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVP 230

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V TY  LI   C+  +V+E + +L  M+  G  PN++TY+ +I G C AG+ D+A  L
Sbjct: 231 -DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              + + G  P    Y  LI  F +   S     ++ EM   G+ P  V YT LI+ FV+
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D+  AF++   M       + +TY  LIHGLC  G++++A  LF+ M    ++P+   
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I GY K  N  +A  LL E+ ++ L  N     + +  LC  G    A  L  +M+
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 553 KLGLKPSVSLYNILYRA 569
             GLKP++ +Y  + + 
Sbjct: 470 SWGLKPNIVIYTTIVKG 486



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 165/328 (50%), Gaps = 3/328 (0%)

Query: 124 QALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           +A F  H  M   G+ P   T+N+L+  + K     K    F     K +  +  ++  +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C++ +L +AF++ + ++ +G  P+  +Y +LIDGCCK G+ E+A  LF  + E G+
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
            +T   +  LI G FK G   + ++  E M  N ++P+  TY  LI  +C  G + E  +
Sbjct: 789 ASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM+ R V  NV+TY +L+ G  +  R  E   L D+M   GI P+ + ++ ++D   
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   KA +L + + S G +     Y +LI A  K  N      ++ E+E++G   S  
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           T   L+  F R+   ++A  +   M +S
Sbjct: 968 TCGTLVCCFHRAGRTDEALRVLESMVRS 995


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 250/485 (51%), Gaps = 13/485 (2%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           S+ +    LC L+ L   S++P     L   ++ A   +R    +L  + Q+    V   
Sbjct: 29  SALSADRALCPLSVLPHLSASP----SLPHLLLTASAAARPHATSLRLYAQLKSLSVPIP 84

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
             + + LL  +  + +F    LF    R ++ L   +F I+++  C  G   +A E+L Q
Sbjct: 85  VASLHPLLSSLPSAPAF---ALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQ 141

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT-QHTYTVLICGLFKNG 259
           +      PN V Y ++I G C  G ++ A  + R++ E G +A  ++TY  LI G  K G
Sbjct: 142 MPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 260 LQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
             +D  + +++M   G V+PS   YN LI  YC+ GK+    +  ++M  R +A  V TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  L  + R  +A  +L++M+  G SP+V TYN LI+G+C  G   KA  +F ++  
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   + VTY  LI  FS+ G  +    L     ++GI P  V Y  LI+S     DME+
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A+E+ + M+K    PD  TY  L+ G C+ G + EA  L + M +  ++P+ V YN +I 
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY  +G+   ALR+  EM +KG  P + +Y++ I  LC+  +  +AE L+ +M+  G+ P
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497

Query: 559 SVSLY 563
             S Y
Sbjct: 498 DDSTY 502



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 231/503 (45%), Gaps = 34/503 (6%)

Query: 25  PLKAFSLFNWASRQG--------LQHTPQSISIILRLLLSKMSSHSHAAAQTLI--LKII 74
           P  A +LF  A            L H   S S+   LL +  ++  HA +  L   LK +
Sbjct: 20  PAAALALFKSALSADRALCPLSVLPHLSASPSLPHLLLTASAAARPHATSLRLYAQLKSL 79

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYE----------SIIDAHL-KSRLSD 123
           S  I  +S  P      L    PS+      + +Y           +I+  HL  +    
Sbjct: 80  SVPIPVASLHP------LLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPV 133

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGIL 181
           +AL    QM     RP + T+N+++                 E R +  +  D Y++  L
Sbjct: 134 RALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATL 189

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           I G C+ G +  A +V +++   G  +P+ V+Y +LI G C  G ++ A      + + G
Sbjct: 190 ISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRG 249

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY +L+  LF +    D +   E+MQ NG SP ++TYN LI+ YC EG   +  
Sbjct: 250 IAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKAL 309

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+EM  + V    VTY +LI    ++ +VQE +RL +     GI P+V+ YN LI+  
Sbjct: 310 EVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSH 369

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+ ++A+ +  +++     P  +TYN L+R F   G    A  L+ EM +RGI P  
Sbjct: 370 CTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDL 429

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+Y  LI  +    D++ A  +   M   GF+P + TY  LI GLC      +A  L   
Sbjct: 430 VSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKE 489

Query: 481 MWETKLEPNDVVYNMMIFGYCKE 503
           M    + P+D  Y  +I G   E
Sbjct: 490 MVAKGITPDDSTYISLIEGLTTE 512



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 165/333 (49%), Gaps = 44/333 (13%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N ++   C  GK     +L  +M       N VTYNT+I G C   RVQ A  ++ +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 342 K-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAG 399
           +   GI+P+  TY  LI G+C  G  + A ++F+++ + G+ +PS V YN LI  +   G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
              +A     +M +RGI  +  TY +L+ +         A+ +   MQK+GFSPDV+TY 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 460 VLIHGLCMKGNMK-----------------------------------EASKLFNSMWET 484
           +LI+G C +GN K                                   E  +LFN   + 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+ V+YN +I  +C  G+  RA  ++ EM +K + P+  +Y++ +   C  G+  EA
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 545 EVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             L+++M K G++P +  YN L   Y  K +I+
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIK 446



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 174/330 (52%), Gaps = 4/330 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I    K    + A+  F +ML  G V P +  +N+L+         D   L + E+
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVA-LQYRED 244

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             +  + + V ++ +L+         + A+ VL ++++ GFSP+V  Y  LI+G CK G+
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++A  +F ++ + G+ AT  TYT LI    + G  ++    +      G+ P +  YN 
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+ +C  G +   +++  EM  + +  + +TYNTL+ G C   R+ EA  L+D+M   G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I P++++YN LI G+   G+   A R+ +++   G +P+++TYN LI+   K      A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +L++EM  +GITP + TY  LI+     D+
Sbjct: 485 NLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 10/233 (4%)

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL  Q+K   +   V + + L+     A     AF LF  +          T+N+++R  
Sbjct: 71  RLYAQLKSLSVPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRHL 126

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE-MYSLMQKSGFSPD 454
              G    A +L+R+M      P+ VTY  +I  F     ++ A E M  + ++ G +PD
Sbjct: 127 CATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            YTY  LI G C  G M++A K+F+ M  + ++ P+ V+YN +I GYC  G    AL+  
Sbjct: 183 KYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYR 242

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M ++G+   +A+Y+  +  L  D +  +A  +L +M K G  P V  YNIL
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNIL 295


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 269/535 (50%), Gaps = 27/535 (5%)

Query: 59  SSHSHAAAQTLILKIISGRITSSSFTP------RSLLCHLTQ--LFPSS----------S 100
           S H  A A  ++L++ S  ++     P       SLL HL++  L P +          +
Sbjct: 90  SRHLLAVALPVVLRLHS--LSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHA 147

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
            P   +  Y ++I +  +     +AL Y   M+ SG RP + TFNSL++   ++   D  
Sbjct: 148 PPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVA 207

Query: 161 WLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
              F +   +    DV S+  LI+G CEAG +++A E+  ++++    P++ +Y +L+ G
Sbjct: 208 RDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKG 263

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C     E   ++ R++ ELG   +   Y  ++    +    K+  E  ++M   G++P 
Sbjct: 264 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 323

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + T   +I+ YC EG++S+  ++ + M+ R    NV TYN L+ G C E +V +A  LL+
Sbjct: 324 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 383

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M+  G++P+ +TYN LI G C  G  + AFRL   ++ +G      TYN LI A  K G
Sbjct: 384 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 443

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
            +  A  L   +E RGI P+ VT+  LI+   +S   + A++    M  +G +PD YTY 
Sbjct: 444 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503

Query: 460 VLIHGLC-MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             I  LC MKG+ +E       M +  ++P+ V Y ++I    KE N     R  GEM  
Sbjct: 504 SFIEHLCKMKGS-QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 562

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            G  P++ +Y++++   C +G+  EAE +L +M K G+      YN L     +I
Sbjct: 563 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 617



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 21/463 (4%)

Query: 111 SIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           ++I+A+ K  R+SD AL     M   G +P   T+N+L+          K     ++ R 
Sbjct: 329 AVINAYCKEGRMSD-ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C V  D  ++ +LI+G C  G +  AF +L  +E  G   +   Y +LI+  CK+G  ++
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  +   G+     T+  LI GL K+G     ++F EKM   G +P  YTY+  I 
Sbjct: 448 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 507

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C      EG     EM  ++V  + V Y  +I  L KE       R   +M  +G +P
Sbjct: 508 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 567

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TY   +  +C  G  ++A  +  ++  NG +   + YN L+   +  G +  A  ++
Sbjct: 568 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627

Query: 409 REMEERGITPSEVTYTILIDSFVR-----------------SDDMEKAFEMYSLMQKSGF 451
           ++M      P++ TY IL+   VR                 + ++   F ++ +M+K+ F
Sbjct: 628 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 687

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+  TY  ++ G    G  +EA+ L + M E  +  N+ +Y  ++  +CK      A  
Sbjct: 688 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 747

Query: 512 LLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAEVLLNQMLK 553
           L+  M + G +P + SY   + G++C+       E+ +N   K
Sbjct: 748 LVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWK 790



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 216/479 (45%), Gaps = 18/479 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y +++D   + R + +A     +M + G+ P   T  +++    K            
Sbjct: 289 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 348

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             + +  + +V+++  L++G C  G ++KA  +LN++   G +P+ V Y  LI G C +G
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  L R +   GL+A Q+TY  LI  L K+G        ++ ++  G+ P+  T+N
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+  C  GK    +K  ++M       +  TY++ I  LCK    QE    + +M   
Sbjct: 469 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 528

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P+ + Y  +I             R + ++ S+G +P VVTY   +RA+   G    A
Sbjct: 529 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 588

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH- 463
            +++ EM + G+T   + Y  L+D        + A  +   M      P+ +TY +L+  
Sbjct: 589 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 648

Query: 464 ----------------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
                           G+     + +   LF+ M + +  PN   Y+ ++ G+ ++G + 
Sbjct: 649 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 708

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  L+  M E  +  N   Y++ +   C+  ++ +A VL+  M++ G  P +  Y  L
Sbjct: 709 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 767



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 22/342 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFFS 165
           Y S I+   K + S + L +  +ML   V+P +  +  ++  ++K  ++    + W    
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C    DV ++   ++  C  G LN+A  VL ++ + G + + + Y +L+DG    G 
Sbjct: 562 SSGCNP--DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 619

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLI-----------------CGLFKNGLQKDGFEFY 268
            + A  + +++  +  V  Q TY +L+                  G++K     D F  +
Sbjct: 620 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 679

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M+ N   P+  TY+ ++  +  +G+  E   L   M+   ++ N   Y  L+   CK 
Sbjct: 680 DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKS 739

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R  +A  L+  M   G  P +++Y  L+ G    G+TDKA  +F   +    SP  + +
Sbjct: 740 KRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVW 799

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            V+I    K G+S ++ +++  +E     PS  TY +L +  
Sbjct: 800 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 18/269 (6%)

Query: 95  LFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           L   S N VT   + Y +++D H     +D A+    QM      P   T+  LL  ++ 
Sbjct: 592 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV- 650

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
                         R ++  DV    +   G  +A +L   F + + +++  F PN   Y
Sbjct: 651 --------------RMRLVEDV--LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 694

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           +S+++G  ++G  E A  L   + E  +   +  YT L+    K+    D +     M  
Sbjct: 695 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 754

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G  P L +Y  L+     EG+  +  ++F   R ++ + + + +  +I GL K+     
Sbjct: 755 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 814

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCD 362
           +  ++  ++     P+  TY  L +   D
Sbjct: 815 SREMIIMLERMNCRPSHQTYAMLTEELPD 843


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 233/454 (51%), Gaps = 15/454 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G  P   TFN+LL  +       +    F +  CK   +V +F  L+ G
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ-MCKP--NVVTFTTLMNG 191

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG-LVA 243
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ E+  ++ 
Sbjct: 192 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIP 251

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y  +I GL+K+G   D    + +MQ   + P + TYNC+I+ +C  G+ S+  +L 
Sbjct: 252 NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLL 311

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R++  +VVT++ LI    KE +  EAE L D+M    I P+ +TY+ +IDGFC  
Sbjct: 312 QEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQ 371

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D A  +F    + G SP ++T+N LI  + +A        L+ EM E G+  + +TY
Sbjct: 372 NRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 431

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T LI  F +  D+  A ++   M  SG  P+V T   L+ GLC  G +K+A ++F +M +
Sbjct: 432 TTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 484 TKL-----------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +K+           EP+   YN++I G   EG    A  L  EM  +G+VP+  +YSS I
Sbjct: 492 SKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  EA  + + M      P V  +N L
Sbjct: 552 DGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 585



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 222/457 (48%), Gaps = 17/457 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D A+  F  M+ S   P    F  L+  V++    D    L       ++  + YSF IL
Sbjct: 63  DDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTIL 122

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +K  C    L  A     ++ ++GF P VV + +L+ G C    I  A  LF ++ +  +
Sbjct: 123 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNV 182

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    T+T L+ GL + G   +     ++M  +G+ P+  TY  ++   C  G       
Sbjct: 183 V----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 302 LFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           L  +M     +  NVV YNT+I GL K+ R  +A  L  +M+   I P+++TYN +I+GF
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G    A +L  ++     +P VVT++ LI AF K G    A +L  EM  R I PS 
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY+ +ID F + + ++ A  M+ L    G SPD+ T+  LI G C    + +  KL + 
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  L  N + Y  +I G+C+ G+   A  LL EM   G+ PN+ + ++ +  LC +GK
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 541 WPEAEVLLNQMLKL-----------GLKPSVSLYNIL 566
             +A  +   M K            G++P V  YNIL
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNIL 515



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 18/451 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           Y +I+D   K   +  AL    +M + S + P    +N+++  + K     D   LF   
Sbjct: 220 YGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM 279

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              ++  D+ ++  +I G C +G  + A ++L ++ E   +P+VV +++LI+   K G  
Sbjct: 280 QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKF 339

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ L+ ++    ++ +  TY+ +I G  K          +      G SP + T+N L
Sbjct: 340 FEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTL 399

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC   +V +G KL  EM    +  N +TY TLI G C+   +  A+ LL +M  +G+
Sbjct: 400 IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGV 459

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAF 395
            PNV+T N L+DG CD G+   A  +F  ++            NG  P V TYN+LI   
Sbjct: 460 CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGL 519

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G    A +L  EM  RGI P  +TY+ +ID   +   +++A +M+  M    FSPDV
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDV 579

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  LI G C  G + +  +LF  M +  +  + + Y  +I+G+ K  N   AL +  E
Sbjct: 580 VTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQE 639

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           M   G+ P+  +  + +      G W + E+
Sbjct: 640 MISSGVYPDTITIRNML-----TGLWSKEEL 665



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 185/370 (50%), Gaps = 14/370 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++     NP   +  + ++I+A +K     +A   + +ML   + P + T++S++   
Sbjct: 311 LQEMLERKINPDVVT--FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 152 IKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D    +F+         D+ +F  LI G C A  ++   ++L+++ E G   N 
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + YT+LI G C+ GD+  A+ L +++   G+     T   L+ GL  NG  KD  E ++ 
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 271 MQ-----------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           MQ            NGV P + TYN LI    NEGK  E  +L++EM HR +  + +TY+
Sbjct: 489 MQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           ++I GLCK+ R+ EA ++ D M     SP+V+T+N LI G+C AG  D    LF ++   
Sbjct: 549 SMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQR 608

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G     +TY  LI  F K  N   A D+ +EM   G+ P  +T   ++      +++E+A
Sbjct: 609 GIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERA 668

Query: 440 FEMYSLMQKS 449
             M   +Q S
Sbjct: 669 VAMLEDLQMS 678



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 187/377 (49%), Gaps = 13/377 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
           +  R SD A     +ML+  + P   TF++L+   +K   F +    + E   + +    
Sbjct: 300 ISGRWSD-AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  +I G C+   L+ A  +       G SP+++ + +LI G C+   ++    L  +
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E GLVA   TYT LI G  + G      +  ++M  +GV P++ T N L+   C+ GK
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 296 VSEGFKLFDEMRHRE-----------VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           + +  ++F  M+  +           V  +V TYN LICGL  E +  EAE L ++M   
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI P+ ITY+ +IDG C     D+A ++F+ + S   SP VVT+N LI  + KAG     
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L  EM +RGI    +TY  LI  F + D+++ A +++  M  SG  PD  T   ++ G
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTG 658

Query: 465 LCMKGNMKEASKLFNSM 481
           L  K  ++ A  +   +
Sbjct: 659 LWSKEELERAVAMLEDL 675



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 227/517 (43%), Gaps = 24/517 (4%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI 73
           L+L  +M K   +   +L N   R+G     ++++++ R+L   +  +     Q     I
Sbjct: 171 LDLFHQMCKPNVVTFTTLMNGLCREG--RVVEAVALLDRMLEDGLQPN-----QITYGTI 223

Query: 74  ISGRIT-SSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           + G      + +  +LL  + ++    S+ +    +Y +IID   K      A   F +M
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEV----SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM 279

Query: 133 LDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
            +  + P   T+N ++  F I     D   L       K+  DV +F  LI    + G  
Sbjct: 280 QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKF 339

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            +A E+ +++      P+ V Y+S+IDG CK   ++ A+ +F      G      T+  L
Sbjct: 340 FEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTL 399

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  +     DG +   +M   G+  +  TY  LIH +C  G ++    L  EM    V
Sbjct: 400 IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGV 459

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-----------GISPNVITYNKLIDGF 360
             NVVT NTL+ GLC   ++++A  +   M+ +           G+ P+V TYN LI G 
Sbjct: 460 CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGL 519

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            + G+  +A  L+ ++   G  P  +TY+ +I    K      A+ +   M  +  +P  
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDV 579

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VT+  LI  + ++  ++   E++  M + G   D  TY  LI+G     N+  A  +F  
Sbjct: 580 VTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQE 639

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           M  + + P+ +    M+ G   +    RA+ +L ++ 
Sbjct: 640 MISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 5/275 (1%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF  M       +V+ +  L+  + +  R      L  +M+M  +  N  ++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+  FC   +   A   F ++   G  P+VVT+N L+           A DL  +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P+  TYG ++ G+C  G+   A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 476 KLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            L   M E + + PN V+YN +I G  K+G    A  L  EM EK + P+I +Y+  I  
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+W +AE LL +ML+  + P V  ++ L  A
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINA 332



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 5/213 (2%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    D A  LF  +  +   PSV+ +  L+    + G   +   L ++ME  
Sbjct: 51  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEML 110

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +  +  ++TIL+  F     +  A   +  + K GF P V T+  L+HGLC++  + EA
Sbjct: 111 RMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA 170

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF+ M     +PN V +  ++ G C+EG    A+ LL  M E GL PN  +Y + +  
Sbjct: 171 LDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226

Query: 535 LCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNIL 566
           +C+ G    A  LL +M ++  + P+V +YN +
Sbjct: 227 MCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTI 259



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 60/139 (43%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A +++  M +S   P V  +  L+  +   G       L   M   ++  N   + +
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++  +C       AL   G++ + G  P + ++++ +  LC + +  EA  L +QM K  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181

Query: 556 LKPSVSLYNILYRAKNNIE 574
           +    +L N L R    +E
Sbjct: 182 VVTFTTLMNGLCREGRVVE 200


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 230/440 (52%), Gaps = 2/440 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G  P    +N++L+  +   S      FF       V  +VY++ IL++  C  G   +A
Sbjct: 118 GYAPSVLAYNAVLL-ALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             VL  +   G  PN V Y +L+   C+ G+++RA+ L   + E GL     T+  ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + K G  +D  + +++M   G++P   +YN L+  YC  G   E   +F EM  + +  +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+ +LI  +CK   ++ A  L+ +M+  G+  N IT+  LIDGFC  G  D A     
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++     PSVV YN LI  +   G    A +LVREME +G+ P  VTY+ ++ ++ ++ 
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D   AF++   M ++G  PD  TY  LI  LC +  + +A  LF +M    L+P++V Y 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G+CKEGN  RAL L  EM + G++P++ +YS  I  L +  +  EA+ LL ++   
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 555 GLKPSVSLYNILYRAKNNIE 574
              P+   Y+ L R   N E
Sbjct: 537 EPVPANIKYDALMRCCRNAE 556



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 238/522 (45%), Gaps = 90/522 (17%)

Query: 121 LSDQAL----FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDV 175
           LSD +L     +F  ML  GV P   T+N L+  +       +      + R    + + 
Sbjct: 133 LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNA 192

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  L+   C AG++++A  +++ + E G  PN+V + S+++G CK G +E A+ +F +
Sbjct: 193 VTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDE 252

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + + GL     +Y  L+ G  K G   +    + +M   G+ P + T+  LIH  C  G 
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +     L  EMR R +  N +T+  LI G CK+  + +A   + +M+   I P+V+ YN 
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNA 372

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C  G  D+A  L  ++++ G  P VVTY+ ++ A+ K G++  A  L ++M E G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432

Query: 416 I-----------------------------------TPSEVTYTILIDSFVRSDDMEKAF 440
           +                                    P EVTYT LID   +  ++E+A 
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERAL 492

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGL----------------------------------- 465
            ++  M K+G  PDV TY VLI+GL                                   
Sbjct: 493 SLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCC 552

Query: 466 ---------------CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                          CMKG M EA K++ S+ +     +  VY+++I G+C+EGN  +AL
Sbjct: 553 RNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKAL 612

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
               +M + G  PN  S  S I  L + G   EA+ ++ Q+L
Sbjct: 613 SFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLL 654



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 222/467 (47%), Gaps = 16/467 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           + S+++   K+   + A   F +M+  G+ P   ++N+L+    K  CS +   +F    
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  DV +F  LI   C+AG+L +A  ++ ++ E G   N + +T+LIDG CK G ++
Sbjct: 290 RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLD 349

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +  R++ +  +  +   Y  LI G    G   +  E   +M+  GV P + TY+ ++
Sbjct: 350 DALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTIL 409

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G     F+L  +M    V  + +TY++LI  LC+E R+ +A  L   M   G+ 
Sbjct: 410 SAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQ 469

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TY  LIDG C  G  ++A  L +++   G  P VVTY+VLI   SK+  +K A  L
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529

Query: 408 VREMEERGITPSEVTYTIL---------------IDSFVRSDDMEKAFEMYSLMQKSGFS 452
           + ++      P+ + Y  L               +  F     M +A ++Y  +    ++
Sbjct: 530 LFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D   Y VLIHG C +GN+ +A      M +    PN      +I G  ++G    A ++
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           + ++     + +  +  + I +  ++G       +L+ M + GL PS
Sbjct: 650 IQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 243/492 (49%), Gaps = 42/492 (8%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           +PVT    Y  +IDA  K  + ++A     +M++ G  P   T+N+++  + KS   ++ 
Sbjct: 79  SPVT----YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            L F+E  R     +  S   +I G C+   +++A +V +++E     P+   Y  LIDG
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             K G +  A  LF+++ + G+  +  TY V+I G+       +  E ++ M+  G  PS
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
            +T+N LI  +C  GK+ E F+L   M       +VVTY+TLI GLC   RV +A  LL+
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M      P V+T N LI G C AG   +A  + + + S+GQSP VVTYN L+    +AG
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
            ++ A +L+ +M  RG+ P+ VTYT L+    +++ + +A  +++ M+ SG +P+++TY 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI G C  G +    KLF  M    + P+ VVY  +    CK G S RAL +L E  E 
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 520 -------------------------------------GLVPNIASYSSTIGVLCQDGKWP 542
                                                G +P     +S +  LC+ G+  
Sbjct: 495 LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 554

Query: 543 EAEVLLNQMLKL 554
           EA  +L +++ L
Sbjct: 555 EARAVLEEIMDL 566



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 220/435 (50%), Gaps = 35/435 (8%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   V  D +S+GILI G  +AG LN A  +  +L   G +P+ V YTSLI G C     
Sbjct: 2   NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ LF  +   G   +  TY V+I    K G+ ++  +  +KM  +G  P + TYN +
Sbjct: 62  DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C   +V E   LF+EM       N  ++NT+I GLC++ ++ +A ++  +M+   I
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  +Y  LIDG   AG+ ++A++LF ++  +G +PS VTYNV+I     A     A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG------- 459
           L + M  +G  PS  T+ ILID+  +   +++AF +   M   G  PDV TY        
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 460 ----------------------------VLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
                                        LIHGLC  G +KEA ++ ++M  +   P+ V
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN ++ G+C+ G + RA  LL +M  +GL PN+ +Y++ +  LC+  + PEA  +  QM
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 552 LKLGLKPSVSLYNIL 566
              G  P++  Y  L
Sbjct: 422 KSSGCAPNLFTYTAL 436



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 227/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +ID   K+   + A   F ++L SGV P +  + SL+  +  + SFD     F++ N
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R        ++ ++I   C+ G L +A +++ ++ E G  P+VV Y +++DG CK+  +E
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +LF ++  LG    + ++  +I GL +        + + +M+   + P  ++Y  LI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 GK++E +KLF  M    +  + VTYN +I G+C    + EA  L   M+  G  
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  T+N LID  C  G+ D+AFRL  ++  +G  P VVTY+ LI           A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M +R   P+ VT   LI    ++  +++A E+   M  SG SPDV TY  L+HG C 
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G  + A +L + M    L PN V Y  ++ G CK      A  +  +M   G  PN+ +
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I   C  G+      L  +M+  G+ P   +Y  L
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 147/331 (44%), Gaps = 70/331 (21%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R V+ +  +Y  LI GL K  ++ +A  L  ++  +G++P+ + Y  LI G C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A  LF  +   G  PS VTYNV+I A  K G  + A DL+++M E G  P  VTY  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSG----------------------------------- 450
           ++D   +S  +E+A  +++ M++ G                                   
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG----------- 499
             PD ++YG+LI GL   G + EA KLF  M ++ + P+ V YN++I G           
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 500 ------------------------YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                                   +CK G    A RLL  M + G VP++ +YS+ I  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C   +  +A  LL  M+K   KP+V   N L
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 239/459 (52%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++D   K + S +A   F  M  SG+ P   T+ +L+   IK  + ++      E  
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++L+V ++  +I G  +AG++ KA  + N++   G  P+   Y  LIDG  K+ D+ 
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMA 433

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  ++    L  +  TY+VLI GL  +   +   E  ++M  NGV P+++ Y  LI
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  E +     +L   M    V  ++  YN LI GLC+  +V+EA+ LL  M   GI 
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIK 553

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY   I+ +  +GE   A R F  + S+G  P+ V Y +LI+     GN+  A   
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            + M E+G+ P    Y+ +I S  ++   ++A  ++    K+G  PDV+ Y  LI G C 
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK 673

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G++++AS+L++ M    + PN VVYN +I G CK G   +A  L  E+ EK LVP++ +
Sbjct: 674 EGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVT 733

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS+ I   C+ G   EA  L ++M+  G+ P   +Y IL
Sbjct: 734 YSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 246/480 (51%), Gaps = 37/480 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           ++A   F   +  G  P     N+L+  ++K+      W ++ S    K+  DVY++  +
Sbjct: 189 NEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNV 248

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IK  C+ GD+ K   VL+++E+    PN+  Y + I G C+ G ++ A  + + + E GL
Sbjct: 249 IKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGL 307

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               HTYT+L+ G  K    K+    +E M  +G++P+ +TY  LI  +  EG + E  +
Sbjct: 308 GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALR 367

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + DEM  R +  NVVTYN +I G+ K   + +A  L ++M MAG+ P+  TYN LIDG+ 
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYL 427

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            + +  KA  L  ++K+   +PS  TY+VLI     + + + A++++ +M   G+ P+  
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL---- 477
            Y  LI ++V+    E A E+  +M  +G  PD++ Y  LI GLC    ++EA  L    
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 478 -------------------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                                          F  M  + + PN+V+Y ++I G+C  GN+
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             AL     M EKGL+P+I +YS+ I  L ++GK  EA  +  + LK G+ P V LYN L
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 168/632 (26%), Positives = 291/632 (46%), Gaps = 89/632 (14%)

Query: 27   KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
            KA SLFN     GL+    + ++++      + SH  A A  L+ ++ + ++T S FT  
Sbjct: 399  KAMSLFNEMLMAGLEPDTWTYNLLID---GYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 87   SL---LCH----------LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
             L   LCH          L Q+  +   P     +Y ++I A+++    + A+     M+
Sbjct: 456  VLISGLCHSSDLQKANEVLDQMIRNGVKP--NVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 134  DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG------------- 179
             +GV P    +N L+I + ++   ++  +   +   K ++ + +++G             
Sbjct: 514  ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 180  ----------------------ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                                  ILIKG C+ G+  +A      + E G  P++  Y+++I
Sbjct: 574  VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
                KNG  + A  +F K  + G+V     Y  LI G  K G  +   + Y++M  NG++
Sbjct: 634  HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            P++  YN LI+  C  G+V++  +LFDE+  +++  +VVTY+T+I G CK   + EA +L
Sbjct: 694  PNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753

Query: 338  LDQMKMAGISPNVITY----------------------------------NKLIDGFCDA 363
             D+M   GISP+   Y                                  N LID FC  
Sbjct: 754  FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH 813

Query: 364  GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            G+  +A  LF+ +     +P++VTY +LI A+ KA   + A  L  +ME R I P+ +TY
Sbjct: 814  GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 873

Query: 424  TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            T L+ S+ +  +  K   ++  M+  G + D   YGV+    C +G   EA KL N    
Sbjct: 874  TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933

Query: 484  TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
              ++  D V++ +IF  CKE      L LL EM ++ L  +  + ++ +    + G   E
Sbjct: 934  EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 993

Query: 544  AEVLLNQMLKLGLKP-SVSLYNILYRAKNNIE 574
            A  +L  M +LG  P S+SL + +   +++++
Sbjct: 994  ASKVLGVMQRLGWVPTSLSLTDSISTGRDDMK 1025



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 198/393 (50%), Gaps = 1/393 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++   +A  +   ++V   + E    P+V  YT++I   CK GD+ + KM+  ++ E  
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKE 271

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY   I GL + G   +  E  + M   G+ P  +TY  L+  +C + +  E  
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +F+ M    +  N  TY  LI G  KE  ++EA R+ D+M   G+  NV+TYN +I G 
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AGE  KA  LFN++   G  P   TYN+LI  + K+ +   A +L+ EM+ R +TPS 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY++LI     S D++KA E+   M ++G  P+V+ YG LI     +   + A +L   
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    + P+   YN +I G C+      A  LL +M EKG+ PN  +Y + I +  + G+
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
              AE     ML  G+ P+  +Y IL +   ++
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 231/453 (50%), Gaps = 8/453 (1%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            SS  V  + +Y  +I  H     + +AL  F  ML+ G+ P    +++++  + K+    
Sbjct: 584  SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 159  KGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            +   +F    +  V  DV+ +  LI G C+ GD+ KA ++ +++   G +PN+V+Y +LI
Sbjct: 644  EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            +G CK G++ +A+ LF +I E  LV    TY+ +I G  K+G   + F+ +++M   G+S
Sbjct: 704  NGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS 763

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            P  Y Y  LI     EG + +   LF E + + V  ++  +N+LI   CK  +V EA  L
Sbjct: 764  PDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEAREL 822

Query: 338  LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             D M    ++PN++TY  LID +  A   ++A +LF  +++    P+ +TY  L+ ++++
Sbjct: 823  FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 882

Query: 398  AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS---GFSPD 454
             GN      L ++ME RGI    + Y ++  ++ +     K+ E   L+ KS   G   +
Sbjct: 883  IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG---KSLEALKLLNKSLVEGIKLE 939

Query: 455  VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
               +  LI  LC +  +    +L + M + +L  +    N ++ G+ K GN   A ++LG
Sbjct: 940  DDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLG 999

Query: 515  EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
             M   G VP   S + +I     D K   ++VL
Sbjct: 1000 VMQRLGWVPTSLSLTDSISTGRDDMKSDISQVL 1032



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 147/295 (49%), Gaps = 1/295 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+L   N L+ +      +   +K++  M   ++  +V TY  +I   CK   V + 
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + +L +M+     PN+ TYN  I G C  G  D+A  +   +   G  P   TY +L+  
Sbjct: 262 KMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F K   SK A  +   M   G+ P+  TYT LID F++  ++E+A  +   M   G   +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  +I G+   G M +A  LFN M    LEP+   YN++I GY K  +  +A  LL 
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM  + L P+  +YS  I  LC      +A  +L+QM++ G+KP+V +Y  L +A
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/526 (31%), Positives = 256/526 (48%), Gaps = 58/526 (11%)

Query: 27  KAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS-------GRI 78
           +A  LF+  SR+  L   PQ  S I+ +L     +  +A A+ L+  +I         RI
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVL---TGAKLYAKARCLMRDLIQCLQNSRRSRI 108

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
             S F        L++L  S   P     ++  +I A  +  L ++AL+ +++M    V 
Sbjct: 109 CCSVFNV------LSRLESSKFTP----NVFGVLIIAFSEMGLVEEALWVYYKM---DVL 155

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P     N +L  ++K   FD  W                                  +V 
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMW----------------------------------KVY 181

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             +   G SPNVV Y +LIDGCC+ GD  +A  LF ++ E  +  T   YT+LI GL   
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
               +    +  M+ +G+ P+LYTYN ++  YC    V +  +L+ EM    +  NVVT+
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LI GLCK   +  A + L  M   G+ PN+  YN LIDG+C AG   +A  L ++++ 
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           +   P V TY++LI+        + A  L++EM+++G  P+ VTY  LID + +  +MEK
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+ S M + G  P++ T+  LI G C  G M+ A  L+  M    L P+ V Y  +I 
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           G+ K+GN+  A RL  EM E GL PN+ + S  I  LC+DG+  +A
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 222/497 (44%), Gaps = 59/497 (11%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVY 176
           +SR+S +A   F  M +SG+ P   T+N+++    K     K    + E      L +V 
Sbjct: 241 ESRIS-EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +FGILI G C+  ++  A + L  +   G  PN+ +Y  LIDG CK G++  A  L  +I
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +  ++    TY++LI GL      ++     ++M+  G  P+  TYN LI  YC EG +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  ++  +M  + +  N++T++TLI G CK  +++ A  L  +M + G+ P+V+ Y  L
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN---------SKMASD- 406
           IDG    G T +AFRL  +++  G  P+V T + LI    K G          +K  +D 
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT 539

Query: 407 -------LVREMEE---------RGIT------------------PSEVTYTIL------ 426
                  L R + +         RGI+                  P    +T L      
Sbjct: 540 TGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSN 599

Query: 427 --IDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +  +++S +  K    +  L++K+  S D ++    +    +K ++ E  ++   +  
Sbjct: 600 QTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVIN 659

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
              EP   +   +I  Y   GN   A  +  E+  K L+    S++S I     + +  +
Sbjct: 660 FGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRPNK 715

Query: 544 AEVLLNQMLKLGLKPSV 560
           A  L  QM    ++P +
Sbjct: 716 ALQLFRQMQMDDVQPDI 732



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 15/228 (6%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P ++    LI  Y   G V++   +FDE+  +    N++++ ++I       R  +A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKA 716

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +L  QM+M  + P+++T    +    D G  D    +   ++  G    +   N LI  
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSP 453
           +SK G    A           + P++VT+  ++ +   +  +E+  + +  M++     P
Sbjct: 777 YSKCGEIGTARRFSL------VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            +  +G ++  LC  G + EA +    M    + PN VV+  ++ G C
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL-GAC 874



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 41/344 (11%)

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
           P   +  +T+LF +++ P  K+ L+      HLK   S+Q L  + Q         SNT 
Sbjct: 568 PCICVIRVTKLFATNNQP--KAHLH-----THLKPPKSNQTLKRYLQ--------SSNTS 612

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
             LL F I             +N   +  D +S    +K C     L +  ++   +   
Sbjct: 613 KVLLFFRI----------LLRKNPSSI--DSFSLMFALKACTLKSSLVEGKQMHALVINF 660

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF P + + TSLI      G++  A  +F +I    L+    ++T +I     N      
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRPNKA 716

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + +MQ++ V P + T    +    + G +  G  +   +RHR +  ++   N+LI  
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSP 383
             K   +  A R       + + PN +T+  ++     AG  ++  + F  +K +    P
Sbjct: 777 YSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            +  +  ++    +AG    A + + +M  R   P+ V +  L+
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLL 871



 Score = 38.5 bits (88), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 13/212 (6%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           NKA ++  Q++     P++V  T  +  C   G ++  + +   I   GL         L
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR-E 310
           I     N   K G E     + + V P+  T+  ++    + G V EG + F  M+    
Sbjct: 774 I-----NMYSKCG-EIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYS 827

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +   +  +  ++  LC+   + EA   + +M    + PN + +  L+      G  DK  
Sbjct: 828 LRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGMWDKKM 884

Query: 371 RLFNQLKSNGQSP--SVVTYNVLIRAFSKAGN 400
            + NQ+K   + P  S +   + I+ F  A +
Sbjct: 885 LVRNQIKQR-RDPGCSSIEVGIDIKEFVAADD 915


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 280/576 (48%), Gaps = 42/576 (7%)

Query: 23  LPPLKAFSLFNWASRQ-GLQHTPQSIS-IILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           L P++A     + SR+   ++ P + + + +RLL S+    +   A+  ++K  S +   
Sbjct: 115 LVPVRALEFLLFLSREHSHKYGPDTFAKVAMRLLESRDRPAAVGRARIHMIKSCSNKAEM 174

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           +       L +L     S   P      Y +++    K  ++   +  +HQ+L  G++P 
Sbjct: 175 TQ-----ALNYLDMF--SQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 141 SNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              +NS++  + K  +  D   +     +  ++ D +++  +I G C   DL+ AFE+ N
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           +++E G  PN   Y++LI+G C +G +  A     ++   G++ T HT+T  I  L   G
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLI-------------HEYCNEG------------ 294
             +D ++ +  M+  G  P++YTY  LI             H    +G            
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALM 407

Query: 295 -------KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  ++     +F+ M       N  +YN LI G C     ++A  +L  M     +
Sbjct: 408 NVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT 467

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P ++TYN +I G+CD+G+TD A R+   +K+NG  P   +Y  LI  F K    ++AS +
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM +RG+ P+EVTYT LI  + + + ++ A  M   M++SG  P+V TY VLIHGL  
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           + N   A +L   M E K+ P+ V Y+ +I G C  G    AL +  +M + G +PN+ +
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           YSS I  L Q+G+  EAE + +++ K GL P    Y
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTY 683



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 232/483 (48%), Gaps = 8/483 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++F S   P T +  Y S+I  + ++R  D A   F++M + G  P + T+++L+  +
Sbjct: 251 INKVFKSGMKPDTFT--YTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGL 308

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
             S   ++   F SE  R  V   V++F   I   C+ G +  A+++   +++ G  PNV
Sbjct: 309 CNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNV 368

Query: 211 VIYTSLIDGCCKNGDIERAKM-LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
             YTSLI G      + R  + LF ++   G+V    TY  L+  L +N         + 
Sbjct: 369 YTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFN 424

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
            M  +G  P+  +YN LI  YC  G   +   +   M        +VTYN +I G C   
Sbjct: 425 MMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSG 484

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
               A R+L+ MK  G  P+  +Y +LI GFC   + + A  +FN++   G  P+ VTY 
Sbjct: 485 DTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYT 544

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI  + K      A+ ++  M+  G  P+  TY +LI    + ++   A E+  +M + 
Sbjct: 545 ALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEE 604

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
             SPDV TY  +I+GLC  G +  A ++FN M +    PN   Y+ +I    +EG    A
Sbjct: 605 KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +  E+ ++GL+P+  +Y   I V    GK   A   L +M+  G +P++  Y++L + 
Sbjct: 665 EEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724

Query: 570 KNN 572
             N
Sbjct: 725 LQN 727



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 225/479 (46%), Gaps = 51/479 (10%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL--------FFSENRCKVELDVYSFGILI 182
           ++L+S  RP +       I +IKSCS +K  +         FS+   K+ L  Y+  ++ 
Sbjct: 146 RLLESRDRPAA--VGRARIHMIKSCS-NKAEMTQALNYLDMFSQRGPKMGLFTYTTLLI- 201

Query: 183 KGCCEAGDLNKAFEVLNQLEEM---GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
               +   LN    V+++  ++   G  PN++IY S+I+  CK+G++  A+ +  K+ + 
Sbjct: 202 ----QLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKS 257

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+     TYT +I G  +N      FE + +M   G  P+  TY+ LI+  CN G+V+E 
Sbjct: 258 GMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEA 317

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
                EM    V   V T+   I  LC   R+++A ++   MK  G  PNV TY  LI G
Sbjct: 318 LDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377

Query: 360 --------------------------------FCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                                             +  E D A  +FN +  +G  P+  +
Sbjct: 378 QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSS 437

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN LIR +   G+++ A  ++  M +   TP+ VTY I+I  +  S D + A  +  LM+
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            +G  PD ++Y  LI G C    M+ AS +FN M +  L PN+V Y  +I GYCK+    
Sbjct: 498 ANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLD 557

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A R+L  M   G  PN+ +Y+  I  L +   +  AE L   ML+  + P V  Y+ +
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTV 616



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 215/510 (42%), Gaps = 55/510 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+    S   ++AL +  +M   GV P  +TF + ++ +      +  W  F + +
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMK 360

Query: 169 CK-VELDVYSFGILIKG--------------------------------CCEAGDLNKAF 195
            K  + +VY++  LI G                                  E  +++ A 
Sbjct: 361 KKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSAL 420

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V N + + G  PN   Y  LI G C  GD E+A  +   + +     T  TY ++I G 
Sbjct: 421 IVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGY 480

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
             +G         E M+ NG  P  ++Y  LI  +C   K+     +F+EM  R +  N 
Sbjct: 481 CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNE 540

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY  LI G CK+ ++  A R+L++MK +G  PNV TYN LI G         A  L   
Sbjct: 541 VTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 600

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +     SP VVTY+ +I      G   +A ++  +M + G  P+  TY+ LI +  +   
Sbjct: 601 MLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGR 660

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+A EM+S ++K G  PD  TY  +I    M G +  A      M     +P    Y++
Sbjct: 661 VEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDV 720

Query: 496 MIFGYCKEGNSYRALRLLG---------EMNEKGLVPNIAS-------------YSSTIG 533
           +I G   E   ++ + L           ++  K ++  ++S             Y + + 
Sbjct: 721 LIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLS 780

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
            L + G+W EA  L   M+     P+   Y
Sbjct: 781 RLSRSGRWFEANNLYRSMVSQSQCPNQDTY 810



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 3/295 (1%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G    L+TY  L+ +       S     + ++    +  N++ YN++I  LCK+  V++A
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           E +++++  +G+ P+  TY  +I G+C   + D AF +FN++   G  P+  TY+ LI  
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
              +G    A D + EM   G+ P+  T+T  I +      +E A++++  M+K G  P+
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           VYTY  LI G   +   + A  LF+ M    + PN V YN ++    +      AL +  
Sbjct: 368 VYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFN 424

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M + G +PN +SY+  I   C  G   +A  +L  MLK    P++  YNI+ + 
Sbjct: 425 MMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG 479



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 120/524 (22%), Positives = 202/524 (38%), Gaps = 131/524 (25%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y S+I      R+S  A+  FH+M   GV P + T+N+L+  ++++   D   + F+   
Sbjct: 371 YTSLISGQ---RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMG 427

Query: 166 ENRCKVELDVY---------------------------------SFGILIKGCCEAGDLN 192
           ++ C      Y                                 ++ I+IKG C++GD +
Sbjct: 428 KHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTD 487

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  VL  ++  G  P+   YT LI G CK   +E A  +F ++ + GL   + TYT LI
Sbjct: 488 VAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K+          E+M+ +G  P++ TYN LIH    +   S   +L   M   +++
Sbjct: 548 SGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS 607

Query: 313 CNVVTYNTLICGLC-----------------------------------KEMRVQEAERL 337
            +VVTY+T+I GLC                                   +E RV+EAE +
Sbjct: 608 PDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEM 667

Query: 338 LDQMKM-----------------------------------AGISPNVITYNKLIDGFCD 362
             ++K                                    AG  P + TY+ LI G  +
Sbjct: 668 FSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVT----------------------YNVLIRAFSKAGN 400
                K   L N   ++     ++                       Y+ L+   S++G 
Sbjct: 728 EMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGR 787

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A++L R M  +   P++ TY   + S +R+  ++ A +++  M        +  Y  
Sbjct: 788 WFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKE 847

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           LI  LC     KEA  +F  M    L  +++V+ ++I G    G
Sbjct: 848 LICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 33/381 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  + K    D A     +M  SG RP   T+N L+  + K  +F       +E  
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSG-----AEEL 597

Query: 169 CKVEL------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           CKV L      DV ++  +I G C  G +  A E+ N++ + G  PN+  Y+SLI    +
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E A+ +F ++ + GL+  + TY  +I     +G     F+F  +M   G  P+L T
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQT 717

Query: 283 YNCLIHEYCNEGKVSEGFKL--------FDEMRHREVACNVVT--------------YNT 320
           Y+ LI    NE    +   L        FD+    +   +V++              Y+ 
Sbjct: 718 YDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDA 777

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L+  L +  R  EA  L   M      PN  TY   +     A + D A  +F  +    
Sbjct: 778 LLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQR 837

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
               +  Y  LI    +    K A  +  +M  R +   E+ +TILI+  + +   +   
Sbjct: 838 CELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCM 897

Query: 441 EMYSLMQKSGFSPDVYTYGVL 461
           E   +M+ +  +P  +   +L
Sbjct: 898 EFLHIMETNRRNPSSHARTIL 918



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 31/346 (8%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +I G    ++F+    LC +      S + VT    Y ++I+    +     AL  F++M
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVT----YSTVINGLCNNGAIPLALEMFNKM 636

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           +  G  P  +T++SL+  + +    ++    FSE  +  +  D  ++  +I+ C  +G +
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK------------------------NGDIE 227
           ++AF+ L ++   G  P +  Y  LI G                           N D+ 
Sbjct: 697 DRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDV- 755

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
              +L  K+ EL    ++  Y  L+  L ++G   +    Y  M      P+  TY   +
Sbjct: 756 -ISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  KV     +F  M  +    ++  Y  LIC LC+  R +EA  + ++M    ++
Sbjct: 815 ISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALN 874

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            + I +  LI+G   AG  D      + +++N ++PS     +L R
Sbjct: 875 ADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAR 920


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 224/415 (53%), Gaps = 3/415 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P    +N++L+  +   S      F S   R  V  +VY++ IL++  C  G L +A
Sbjct: 113 GYAPSVPAYNAVLL-ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLIC 253
             V+  +   G +PN V Y +L+   C+ G+++ A+ +   + E G       T+  ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G  +   + +++M   G++P + +YN L+  YC  G + E   +F EM  R +  
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VVT+ +LI   CK   +++A  L+ QM+  G+  N +T+  LIDGFC  G  D A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++  G  PSVV YN LI  + K G   +A +L+REME + + P  VTY+ +I  + + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +++ AF++   M K G  PD  TY  LI GLC +  + +A +LF +M +  ++P++  Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
             +I G+CKEGN  +AL L  EM  KG++P++ +YS  I  L +  +  EA  LL
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 234/471 (49%), Gaps = 21/471 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSF 157
           + N VT    Y +++ A  ++   D A      M + G  +P   TFNS++  + K+   
Sbjct: 184 APNAVT----YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +     F E  R  +  DV S+  L+ G C+ G L+++  V +++ + G  P+VV +TSL
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I   CK G++E+A  L  ++ E GL   + T+T LI G  K G   D     E+M+  G+
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            PS+  YN LI+ YC  G++    +L  EM  + V  +VVTY+T+I G CK   +  A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L  +M   G+ P+ ITY+ LI G C+    + A  LF  +   G  P   TY  LI    
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K GN + A  L  EM  +G+ P  VTY++LI+   +S   ++A  +   +      PD  
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539

Query: 457 TYGVL---------------IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            Y  L               + G CMKG MKEA K++ SM +   + +  VY+++I G+C
Sbjct: 540 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 599

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + GN  +AL    +M   G  PN  S  S +  L ++G   EA+  +  +L
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 232/467 (49%), Gaps = 21/467 (4%)

Query: 121 LSDQAL----FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDV 175
           LSD +L     +   ML  GV P   T+N L+  +      ++      + R      + 
Sbjct: 128 LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNA 187

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++  L+   C AG+L+ A  V++ + E G + PN+V + S+++G CK G +E A+ +F 
Sbjct: 188 VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   GL     +Y  L+ G  K G   +    + +M   G+ P + T+  LIH  C  G
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + +   L  +MR R +  N VT+  LI G CK+  + +A   +++M+  GI P+V+ YN
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYN 367

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+G+C  G  D A  L  ++++    P VVTY+ +I  + K GN   A  L ++M ++
Sbjct: 368 ALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 427

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  +TY+ LI        +  A E++  M + G  PD +TY  LI G C +GN+++A
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP-NI-------- 525
             L + M    + P+ V Y+++I G  K   +  A RLL ++  +  VP NI        
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547

Query: 526 ---ASYSSTIGVL---CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A + S + +L   C  G   EA+ +   ML    K   S+Y+IL
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 167/305 (54%), Gaps = 1/305 (0%)

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
            F   M  +GV+P++YTYN L+   C  G++ E   +  +MR    A N VTYNTL+   
Sbjct: 138 RFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197

Query: 326 CKEMRVQEAERLLDQMKMAG-ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           C+   +  AER++  M+  G   PN++T+N +++G C AG  + A ++F+++   G +P 
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VV+YN L+  + K G    +  +  EM +RG+ P  VT+T LI +  ++ ++E+A  + +
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M++ G   +  T+  LI G C KG + +A      M +  ++P+ V YN +I GYCK G
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  L+ EM  K + P++ +YS+ I   C+ G    A  L  +MLK G+ P    Y+
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437

Query: 565 ILYRA 569
            L R 
Sbjct: 438 SLIRG 442



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 145/362 (40%), Gaps = 51/362 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++ID   K    D AL    +M   G++P    +N+L+    K    D       E  
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ DV ++  +I G C+ G+L+ AF++  ++ + G  P+ + Y+SLI G C+   + 
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  + +LG+   + TYT LI G  K G  +     +++M   GV P + TY+ LI
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510

Query: 288 --------------------HE------------------------------YCNEGKVS 297
                               HE                              +C +G + 
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 570

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  K++  M  R    +   Y+ LI G C+   V++A     QM  +G SPN  +   L+
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G  + G   +A      L +            LI    K GN     D++  M   G+ 
Sbjct: 631 RGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLL 690

Query: 418 PS 419
           PS
Sbjct: 691 PS 692



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 2/191 (1%)

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G +PSV  YN ++ A S A +   A   +  M   G+ P+  TY IL+ +      +E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIF 498
             +   M+ +G +P+  TY  L+   C  G +  A ++ + M E    +PN V +N M+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK G    A ++  EM  +GL P++ SY++ +   C+ G   E+  + ++M + GL P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 559 SVSLYNILYRA 569
            V  +  L  A
Sbjct: 292 DVVTFTSLIHA 302


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 132/393 (33%), Positives = 219/393 (55%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  L+ G      +  A ++ +++ +MG+ P+V+ Y+++I+G CK G    A  L +K+
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G       Y+ +I  L K+ L  +  EF  +M   G+SP++ TY+ ++H +CN G+ 
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +E   LF +M  R V  + VT+N L+ GL KE  + EA+ + + M   G+ PNV TYN L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG+C   + D+A +LFN +   G +PSV +YN+LI+   K+G    A  L+ EM  + +
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP  VTY+ L+  F +    + A ++   M+  G  PD+ TY +++ GLC +G++ EA +
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L  +M E+K+EPN  +Y ++I G C  G    A  L   +  KG+ P++ +Y+  I  L 
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   EA  L   M   G  P+   YN++ + 
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 37/401 (9%)

Query: 174 DVYSFGILIKGCCEAGD--LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           DVY+  ILI   C +     + AF VL  + ++G  PN V +++L+     NG   +AK+
Sbjct: 9   DVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLL-----NGLSSKAKI 63

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +                              D  + +++M   G  P + TY+ +I+  C
Sbjct: 64  I------------------------------DAVKLFDEMVKMGYEPDVITYSTIINGLC 93

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G  +   +L  +M  +    NVV Y+T+I  LCK+  + EA   L +M   GISPNV+
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY+ ++ GFC+ G +++A  LF Q+      P  VT+N+L+   SK G    A  +   M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E+G+ P+  TY  L+D +     M++A +++++M + G +P V +Y +LI G C  G +
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA  L   M    L P+ V Y+ ++ G+C++G    A +LL EM   GL+P++ +YS  
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +  LC+ G   EA  LL  M +  ++P++ +Y IL +   N
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCN 374



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 166/333 (49%), Gaps = 37/333 (11%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCN-------------------------------------E 293
           M L+ + P +YT   LI+ +C+                                     +
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            K+ +  KLFDEM       +V+TY+T+I GLCK      A +LL +M+  G  PNV+ Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + +ID  C      +A    +++ + G SP+VVTY+ ++  F   G S  A+ L ++M E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           R + P  VT+ IL+D   +   + +A  ++  M + G  P+V TY  L+ G C +  M E
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KLFN M      P+   YN++I G+CK G    A  LL EM+ K L P+  +YS+ + 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             CQDG+  +A+ LL +M   GL P +  Y+I+
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 5/331 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y SI+        S++A   F QM++  V P + TFN L+  + K     
Sbjct: 149 SPNVVT----YSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMIL 204

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +    F     K VE +V ++  L+ G C    +++A ++ N +   G +P+V  Y  LI
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G CK+G I+ AK L  ++    L     TY+ L+ G  ++G  +D  +  E+M+  G+ 
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL 324

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L TY+ ++   C +G + E F+L   M+  ++  N+  Y  LI G+C   +++ A  L
Sbjct: 325 PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              + + GI P+V+TY  +I G    G +++A  LF  +  +G  P+  TYNV+I+ F +
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILID 428
            G++  A  L+ EM  RG +    T+ +L D
Sbjct: 445 NGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 273/545 (50%), Gaps = 20/545 (3%)

Query: 28  AFSLFNWAS-RQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRITSSSFTP 85
           A   FN+    + + H+  S +I++  L+ S++   +++   TL+L+    +   S F  
Sbjct: 86  ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLD 145

Query: 86  RSLLCHLTQLFPSS---SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
               C  +     +    N V  SR++++++   L              M  + + P   
Sbjct: 146 SYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKL--------------MFANNLLPEVR 191

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T ++LL  ++K   F   W  F E+    V  D Y+   +++  CE  D  +A E +  +
Sbjct: 192 TLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWM 251

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           E  GF  ++V Y  LI G CK   +  A  + R +G  GL A   TY  L+ G  +    
Sbjct: 252 EANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQF 311

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           + G +  ++M   G SP+    + L+     +GK+ + ++L  ++       N+  YN L
Sbjct: 312 EAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNAL 371

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I  LCK   + +AE L   M +  + PN ITY+ LID FC +G  D A   F+++  +G 
Sbjct: 372 INSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI 431

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
             +V  YN LI    K G+   A  L  EM  +G+ P+  T+T LI  + +   ++KAF+
Sbjct: 432 GETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFK 491

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +Y+ M  +G +P+VYT+  LI GLC    M EAS+LF+ + E K++P +V YN++I GYC
Sbjct: 492 LYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYC 551

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           ++G   +A  LL +M++KGLVP+  +Y   I  LC  G+  +A+  ++ + K  +K +  
Sbjct: 552 RDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEM 611

Query: 562 LYNIL 566
            Y+ L
Sbjct: 612 CYSAL 616



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 233/459 (50%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID+  +S   D A+ YF +M+  G+      +NSL+    K          F E  
Sbjct: 403 YSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMT 462

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K VE    +F  LI G C+   + KAF++ N++ + G +PNV  +T+LI G C    + 
Sbjct: 463 NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMA 522

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ E  +  T+ TY VLI G  ++G     FE  E M   G+ P  YTY  LI
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ G+VS+     D++  + V  N + Y+ L+ G C+E R+ EA     +M   GI+
Sbjct: 583 SGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGIN 642

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +++ +  LIDG     +    F L   +   G  P  V Y  +I  +SK G+ K A + 
Sbjct: 643 MDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M      P+ VTYT L++   ++ +M++A  ++  MQ +   P+  TYG  +  L  
Sbjct: 703 WDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +GNMKEA  L ++M +  L  N V +N++I G+CK G  + A ++L EM E G+ P+  +
Sbjct: 763 EGNMKEAIGLHHAMLKGLL-ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVT 821

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS+ I   C+ G    +  L + ML  GL+P +  YN+L
Sbjct: 822 YSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLL 860



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 198/395 (50%), Gaps = 10/395 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  L+ G C         ++++++ E+GFSP     + L+DG  K G I+ A  L 
Sbjct: 294 DVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELV 353

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+G  G V     Y  LI  L K G        Y  M L  + P+  TY+ LI  +C  
Sbjct: 354 VKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRS 413

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++      FD M    +   V  YN+LI G CK   +  AE L  +M   G+ P   T+
Sbjct: 414 GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTF 473

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G+C   +  KAF+L+N++  NG +P+V T+  LI           AS+L  E+ E
Sbjct: 474 TSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           R I P+EVTY +LI+ + R   ++KAFE+   M + G  PD YTY  LI GLC  G + +
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A    + + +  ++ N++ Y+ ++ GYC+EG    AL    EM ++G+  ++  ++  I 
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI- 652

Query: 534 VLCQDG--KWPEAEV---LLNQMLKLGLKPSVSLY 563
               DG  K P+ +    LL  M   GL+P   +Y
Sbjct: 653 ----DGALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 205/418 (49%), Gaps = 35/418 (8%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  + G ++ A+E++ ++   GF PN+ +Y +LI+  CK GD+++A++L+  +  + 
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L     TY++LI    ++G       ++++M  +G+  ++Y YN LI+  C  G +S   
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAE 455

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LF EM ++ V     T+ +LI G CK+++VQ+A +L ++M   GI+PNV T+  LI G 
Sbjct: 456 SLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGL 515

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C   +  +A  LF++L      P+ VTYNVLI  + + G    A +L+ +M ++G+ P  
Sbjct: 516 CSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDT 575

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA------ 474
            TY  LI     +  + KA +    + K     +   Y  L+HG C +G + EA      
Sbjct: 576 YTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCE 635

Query: 475 -----------------------------SKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
                                          L   M +  L P++V+Y  MI  Y KEG+
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             +A      M  +   PN+ +Y++ +  LC+ G+   A +L  +M    + P+   Y
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITY 753



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 212/452 (46%), Gaps = 37/452 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y S+I+   K      A   F +M + GV P + TF SL+    K     K +  +++  
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +VY+F  LI G C    + +A E+ ++L E    P  V Y  LI+G C++G I+
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L   + + GLV   +TY  LI GL   G      +F + +    V  +   Y+ L+
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC EG++ E      EM  R +  ++V +  LI G  K+   +    LL  M   G+ 
Sbjct: 618 HGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLR 677

Query: 348 P-----------------------------------NVITYNKLIDGFCDAGETDKAFRL 372
           P                                   NV+TY  L++G C AGE D+A  L
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLL 737

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F ++++    P+ +TY   +   +K GN K A  L   M  +G+  + VT+ I+I  F +
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCK 796

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                +A ++ S M ++G  PD  TY  LI+  C  GN+  + KL+++M    LEP+ V 
Sbjct: 797 LGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVA 856

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           YN++I+G C  G   +A  L  +M  +G++P+
Sbjct: 857 YNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 192/418 (45%), Gaps = 37/418 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + S+I  + K     +A   +++M+D+G+ P   TF +L+  +  +    +    F E  
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K++    ++ +LI+G C  G ++KAFE+L  + + G  P+   Y  LI G C  G + 
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 228 RAKMLFR-------KIGELGLVATQHTY----------------------------TVLI 252
           +AK           K+ E+   A  H Y                             VLI
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K   +K  F+  + M   G+ P    Y  +I  Y  EG   + F+ +D M   E  
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF 712

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVVTY  L+ GLCK   +  A  L  +M+ A + PN ITY   +D     G   +A  L
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + +   G   + VT+N++IR F K G    A+ ++ EM E GI P  VTY+ LI  + R
Sbjct: 773 HHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           S ++  + +++  M   G  PD+  Y +LI+G C+ G + +A +L + M    + P++
Sbjct: 832 SGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN 889


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 217/388 (55%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ ++G+++ G C+ GD + AF +LN++E+    P V+IY ++IDG CK   ++ A  LF
Sbjct: 15  DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++   G+     TY+ LI  L   G   D       M    ++P ++T++ LI  +  E
Sbjct: 75  KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 134

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+ E  KL+DEM  R +  ++VTY++LI G C   R+ EA+++ + M      P+V+TY
Sbjct: 135 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 194

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI GFC     ++   +F ++   G   + VTYN+LI+   +AG+  MA ++ +EM  
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P+ +TY  L+D   ++  +EKA  ++  +Q+S   P +YTY ++I G+C  G +++
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 314

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
              LF ++    ++P+ V YN MI G+C++G+   A  L  EM E G +PN   Y++ I 
Sbjct: 315 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 374

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
              +DG    +  L+ +M   G     S
Sbjct: 375 ARLRDGDREASAELIKEMRSCGFAGDAS 402



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 205/374 (54%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +++++   G  P++V Y  +++G CK GD + A  L  K+ +  L      Y  +I GL 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K     D    +++M+  G+ P++ TY+ LI   CN G+ S+  +L  +M  R++  +V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T++ LI    KE ++ EAE+L D+M    I P+++TY+ LI+GFC     D+A ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            S    P VVTYN LI+ F K    +   ++ REM +RG+  + VTY ILI    ++ D 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A E++  M   G  P++ TY  L+ GLC  G +++A  +F  +  +K+EP    YN+M
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G CK G       L   ++ KG+ P++ +Y++ I   C+ G   EA+ L  +M + G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 557 KPSVSLYNILYRAK 570
            P+   YN L RA+
Sbjct: 363 LPNSGCYNTLIRAR 376



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K +  D AL  F +M   G+RP   T++SL+  +   C++    D   L 
Sbjct: 53  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL---CNYGRWSDASRLL 109

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  DV++F  LI    + G L +A ++ +++ +    P++V Y+SLI+G C +
Sbjct: 110 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 169

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY  LI G  K    ++G E + +M   G+  +  TY
Sbjct: 170 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI      G      ++F EM    V  N++TYNTL+ GLCK  ++++A  + + ++ 
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P + TYN +I+G C AG+ +  + LF  L   G  P VV YN +I  F + G+ + 
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 349

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L +EM+E G  P+   Y  LI + +R  D E + E+   M+  GF+ D  T G++ +
Sbjct: 350 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409

Query: 464 GL 465
            L
Sbjct: 410 ML 411



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 1/155 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D   K+   ++A+  F  +  S + P   T+N ++  + K+   + GW  F    
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 323

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ DV ++  +I G C  G   +A  +  +++E G  PN   Y +LI    ++GD E
Sbjct: 324 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 383

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            +  L +++   G      T  ++   L    L K
Sbjct: 384 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 418


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 17/456 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL------ 162
           Y +I+D   K    ++A      M ++G+ P  NTFN   I V   C    GWL      
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFN---ILVSGYCKL--GWLKEAAQV 304

Query: 163 --FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               ++N   V  DV+++ +LI G C+ G +++AF + +++E +   P+VV Y +LI+GC
Sbjct: 305 IDLMAQNN--VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
                  +   L  K+   G+     TY V++    K G   +      KM+ +G SP  
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC 422

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            T+N LI+ YC  G++SE F++ DEM  + +  N VT NT++  LC E ++ +A +LL  
Sbjct: 423 VTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS 482

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
               G   + ++Y  LI G+   G++ +A +L++++K     PS++TYN +I     +G 
Sbjct: 483 ASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGK 542

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +  + D + E+ E G+ P E TY  +I  + R   +EKAF+ ++ M K  F PD++T  +
Sbjct: 543 TDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNI 602

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           L+ GLC +G + +A KLFN+ W +K +  D V YN +I G CKE     A  LL EM EK
Sbjct: 603 LLRGLCTEGMLDKALKLFNT-WISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK 661

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            L P+  +Y++ +  L   G+  EAE  ++++++ G
Sbjct: 662 KLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 240/463 (51%), Gaps = 39/463 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---FF 164
           + ++ I A++       A   F++M    ++P   T N+L+  +++  S    +L    F
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF 200

Query: 165 SEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           S+  +  V+++  +F ILI GCC    L++A  ++ ++++    P+ V Y +++D  CK 
Sbjct: 201 SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKK 260

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A+ L                                      M+ NG+ P+  T+
Sbjct: 261 GKLNEARDLLLD-----------------------------------MKNNGLLPNRNTF 285

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+  YC  G + E  ++ D M    V  +V TYN LI GLCK+ ++ EA RL D+M+ 
Sbjct: 286 NILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMEN 345

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             + P+V+TYN LI+G  D   + K F L ++++  G  P+ VTYNV+++ + K G    
Sbjct: 346 LKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDN 405

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A + +R+MEE G +P  VT+  LI+ + ++  + +AF M   M + G   +  T   ++H
Sbjct: 406 AGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 465

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            LC +  + +A KL +S  +     ++V Y  +I GY K+G S  A++L  EM EK ++P
Sbjct: 466 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP 525

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +I +Y++ IG LC  GK  ++   LN++L+ GL P  + YN +
Sbjct: 526 SIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 180/390 (46%), Gaps = 24/390 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSEN 167
           Y ++I+       S +      +M   GV+P + T+N ++ + +K    D  G       
Sbjct: 355 YNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 414

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D  +F  LI G C+AG L++AF +++++   G   N V   +++   C    ++
Sbjct: 415 ESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD 474

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L     + G    + +Y  LI G FK+G   +  + +++M+   + PS+ TYN +I
Sbjct: 475 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMI 534

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ GK  +     +E+    +  +  TYNT+I G C+E +V++A +  ++M      
Sbjct: 535 GGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFK 594

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ T N L+ G C  G  DKA +LFN   S G++   VTYN +I    K    + A DL
Sbjct: 595 PDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDL 654

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG----------------- 450
           + EMEE+ + P   TY  ++ +   +  M++A E  S + + G                 
Sbjct: 655 LAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESS 714

Query: 451 ------FSPDVYTYGVLIHGLCMKGNMKEA 474
                   P+  T+   I+ LC +G  K+A
Sbjct: 715 SETSQESDPNSVTFSEQINELCTQGKYKDA 744



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 168/348 (48%), Gaps = 24/348 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           + ++I+ + K+    +A     +M   G++  S T N++L  +      D  + L  S +
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +    +D  S+G LI G  + G   +A ++ ++++E    P+++ Y ++I G C +G  +
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           ++     ++ E GLV  + TY  +I G  + G  +  F+F+ KM      P L+T N L+
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG + +  KLF+    +  A + VTYNT+I GLCKE R +EA  LL +M+   + 
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-----------------------SPS 384
           P+  TYN ++    DAG   +A    +++   G+                        P+
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            VT++  I      G  K A  +V+E  ++GIT  + TY  L++  ++
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 24/246 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I     S  +DQ++   +++L+SG+ P   T+N++++   +    +K + F ++  
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D+++  IL++G C  G L+KA ++ N     G + + V Y ++I G CK    E
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG------------ 275
            A  L  ++ E  L    +TY  ++  L   G  K+  EF  ++   G            
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKR 709

Query: 276 -----------VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                        P+  T++  I+E C +GK  +   +  E   + +  +  TY +L+ G
Sbjct: 710 KIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769

Query: 325 LCKEMR 330
           L K  +
Sbjct: 770 LIKRRK 775


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 224/415 (53%), Gaps = 3/415 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P    +N++L+  +   S      F S   R  V  +VY++ IL++  C  G L +A
Sbjct: 113 GYAPSVPAYNAVLL-ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLIC 253
             V+  +   G +PN V Y +L+   C+ G+++ A+ +   + E G       T+  ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G  +   + +++M   G++P + +YN L+  YC  G + E   +F EM  R +  
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VVT+ +LI   CK   +++A  L+ QM+  G+  N +T+  LIDGFC  G  D A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++  G  PSVV YN LI  + K G   +A +L+REME + + P  VTY+ +I  + + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +++ AF++   M K G  PD  TY  LI GLC +  + +A +LF +M +  ++P++  Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
             +I G+CKEGN  +AL L  EM  KG++P++ +YS  I  L +  +  EA  LL
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 234/471 (49%), Gaps = 21/471 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSF 157
           + N VT    Y +++ A  ++   D A      M + G  +P   TFNS++  + K+   
Sbjct: 184 APNAVT----YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +     F E  R  +  DV S+  L+ G C+ G L+++  V +++ + G  P+VV +TSL
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I   CK G++E+A  L  ++ E GL   + T+T LI G  K G   D     E+M+  G+
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            PS+  YN LI+ YC  G++    +L  EM  + V  +VVTY+T+I G CK   +  A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L  +M   G+ P+ ITY+ LI G C+    + A  LF  +   G  P   TY  LI    
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K GN + A  L  EM  +G+ P  VTY++LI+   +S   ++A  +   +      PD  
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539

Query: 457 TYGVL---------------IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            Y  L               + G CMKG MKEA K++ SM +   + +  VY+++I G+C
Sbjct: 540 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 599

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + GN  +AL    +M   G  PN  S  S +  L ++G   EA+  +  +L
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 232/467 (49%), Gaps = 21/467 (4%)

Query: 121 LSDQAL----FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDV 175
           LSD +L     +   ML  GV P   T+N L+  +      ++      + R      + 
Sbjct: 128 LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNA 187

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++  L+   C AG+L+ A  V++ + E G + PN+V + S+++G CK G +E A+ +F 
Sbjct: 188 VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   GL     +Y  L+ G  K G   +    + +M   G+ P + T+  LIH  C  G
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + +   L  +MR R +  N VT+  LI G CK+  + +A   +++M+  GI P+V+ YN
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYN 367

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+G+C  G  D A  L  ++++    P VVTY+ +I  + K GN   A  L ++M ++
Sbjct: 368 ALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 427

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  +TY+ LI        +  A E++  M + G  PD +TY  LI G C +GN+++A
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP-NI-------- 525
             L + M    + P+ V Y+++I G  K   +  A RLL ++  +  VP NI        
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547

Query: 526 ---ASYSSTIGVL---CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A + S + +L   C  G   EA+ +   ML    K   S+Y+IL
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 167/304 (54%), Gaps = 1/304 (0%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F   M  +GV+P++YTYN L+   C  G++ E   +  +MR    A N VTYNTL+   C
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 327 KEMRVQEAERLLDQMKMAG-ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           +   +  AER++  M+  G   PN++T+N +++G C AG  + A ++F+++   G +P V
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           V+YN L+  + K G    +  +  EM +RG+ P  VT+T LI +  ++ ++E+A  + + 
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M++ G   +  T+  LI G C KG + +A      M +  ++P+ V YN +I GYCK G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A  L+ EM  K + P++ +YS+ I   C+ G    A  L  +MLK G+ P    Y+ 
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 566 LYRA 569
           L R 
Sbjct: 439 LIRG 442



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 2/191 (1%)

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G +PSV  YN ++ A S A +   A   +  M   G+ P+  TY IL+ +      +E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIF 498
             +   M+ +G +P+  TY  L+   C  G +  A ++ + M E    +PN V +N M+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK G    A ++  EM  +GL P++ SY++ +   C+ G   E+  + ++M + GL P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 559 SVSLYNILYRA 569
            V  +  L  A
Sbjct: 292 DVVTFTSLIHA 302


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 290/558 (51%), Gaps = 36/558 (6%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           +LP L A  L ++  R  ++ + Q+ + +L  L ++  S S  A+  +   +I+ R+  +
Sbjct: 151 RLPHLAAQLLHSFRRRGHVRPSLQAANAVLSAL-ARSPSTSPQASLDVFRSLIALRLHPN 209

Query: 82  SFTPRSLLCHL----------------TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
            +T  +LL H                  Q F  S + VT    Y +++ AH +  +  +A
Sbjct: 210 HYT-FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVT----YNTLLKAHCRKGMLGEA 264

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFG 179
                +M   G+ P   T+N+L+     S     GW+  + N  +       E D++++ 
Sbjct: 265 RTLLARMKKEGIAPTRATYNTLV-----SAYARLGWIKQATNVVEAMTAFGFEPDLWTYN 319

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           +L  G C+AG +++AF++ +++E +   SP+VV Y +L+D C K      A  L  ++ +
Sbjct: 320 VLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRD 379

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+ ++  T+ +++ GL + G  ++     + M   G++P + TYN LI  YC    V++
Sbjct: 380 KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAK 439

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            F L DEM    +  +  T NTL+  LCKE R +EAE LL      G  P+ ++Y  ++ 
Sbjct: 440 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMA 499

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
            +    + + A  L++++     +PS+ TYN LI+     G    A D + E+ ++G+ P
Sbjct: 500 AYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVP 559

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
            + TY I+I ++ +  D+EKAF+ ++ M ++ F PDV T   L++GLC+ G +++A KLF
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLF 619

Query: 479 NSMWETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            S W  K +  DV+ YN +I   CK+G+   AL    +M  +GL P+  +Y+  +  L +
Sbjct: 620 ES-WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678

Query: 538 DGKWPEAEVLLNQMLKLG 555
            G+  EA+ +L+++ + G
Sbjct: 679 AGRSEEAQNMLHKLDESG 696



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 231/490 (47%), Gaps = 40/490 (8%)

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGW---LFFSENRCKVELDV 175
           RL   A    H     G VRP     N++L  + +S S        +F S    ++  + 
Sbjct: 151 RLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y+F +L+   C  G L  A   L+ ++  G SP+VV Y +L+   C+ G +  A+ L  +
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR 270

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + + G+  T+ TY  L+    + G  K      E M   G  P L+TYN L    C  GK
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330

Query: 296 VSEGFKLFDEMRHRE-VACNVVTYNTLI--C----------------------------- 323
           V E FKL DEM H   V+ +VVTYNTL+  C                             
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 324 ----GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
               GLC+E +++EA   L  M   G++P+VITYN LID +C A    KAF L +++  +
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G      T N L+    K    + A +L+R   +RG  P EV+Y  ++ ++ + +  E A
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             ++  M K   +P +YTY  LI GLC  G + EA    N + +  L P+D  YN++I  
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YCKEG+  +A +   +M E    P++ + ++ +  LC  GK  +A  L     + G K  
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVD 630

Query: 560 VSLYNILYRA 569
           V  YN L +A
Sbjct: 631 VITYNTLIQA 640



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 216/464 (46%), Gaps = 45/464 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++DA  K + S  AL    +M D GV+    T N   I V   C   +G L  +  R
Sbjct: 354 YNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN---IVVKGLCR--EGQLEEALGR 408

Query: 169 CK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            K      +  DV ++  LI   C+A ++ KAF +++++   G   +     +L+   CK
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
               E A+ L R   + G V  + +Y  ++   FK    +     +++M    ++PS+YT
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   C  GK++E     +E+  + +  +  TYN +I   CKE  +++A +  ++M 
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
                P+V+T N L++G C  G+ +KA +LF      G+   V+TYN LI+A  K G+  
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A     +ME RG+ P   TY +++ +   +   E+A  M   + +SG   + ++Y ++ 
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLI- 707

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
                K + +E         +T  +P        +   C+ G            N KG  
Sbjct: 708 -----KSSAEEV--------KTGKDPE-------VKSDCESGG-----------NAKG-- 734

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  SY+ ++  LC  G+  EA+ +L++M++ G+    S Y  L
Sbjct: 735 GDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITL 778



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 186/383 (48%), Gaps = 4/383 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           ++AL     M + G+ P   T+N+L+    K+ +  K ++   E  R  +++D ++   L
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+     +A E+L    + GF P+ V Y +++    K    E A  L+ ++ +  L
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             + +TY  LI GL   G   +  +   ++   G+ P   TYN +IH YC EG + + F+
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
             ++M       +VVT NTL+ GLC   ++++A +L +     G   +VITYN LI   C
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+ D A   F  +++ G  P   TYNV++ A S+AG S+ A +++ +++E G      
Sbjct: 643 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERF 702

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP--DVYTYGVLIHGLCMKGNMKEASKLFN 479
           +Y  LI S        K  E+ S  +  G +   D  +Y   +  LC+ G +KEA  + +
Sbjct: 703 SYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLD 761

Query: 480 SMWETKLEPNDVVYNMMIFGYCK 502
            M +  +  +   Y  ++ G  K
Sbjct: 762 EMMQKGMSVDSSTYITLMEGLIK 784



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 41/248 (16%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGI 180
           +A+   ++++  G+ P   T+N ++    K    +K + F +   EN  K   DV +   
Sbjct: 544 EAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP--DVVTCNT 601

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G C  G L KA ++     E G   +V+ Y +LI   CK+GD++ A   F  +   G
Sbjct: 602 LMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARG 661

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV---------------------SPS 279
           L     TY V++  L + G  ++      K+  +G                       P 
Sbjct: 662 LQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPE 721

Query: 280 LYT---------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           + +               YN  + E C  G++ E   + DEM  + ++ +  TY TL+ G
Sbjct: 722 VKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781

Query: 325 LCKEMRVQ 332
           L K  + Q
Sbjct: 782 LIKRQKRQ 789


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/448 (32%), Positives = 240/448 (53%), Gaps = 1/448 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           +  ++DA  ++  ++ A+     M+  G++P   T+NS+L  + +S  +DK W  F E +
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V  DV SF ILI G C  G++ +A ++  ++   G  P++V ++ LI    + G ++
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    R++   GLV     YT++I G  + GL  D     ++M   G  P + TYN L+
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C E ++ +   L +EMR R V  ++ T+ TLI G C E ++ +A +L D M    + 
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN LIDG C  G+ DKA  L++ + S    P+ VTY++LI +  + G  + A   
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +GI P+ +TY  +I  + RS ++ K  +    M  +  SPD+ TY  LIHG   
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +  M +A KL N M + K++P+ V YNM+I G+   GN   A  +  +M  KG+ P+  +
Sbjct: 493 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 552

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           Y S I      G   EA  L ++ML+ G
Sbjct: 553 YMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 249/471 (52%), Gaps = 7/471 (1%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS----C 155
           S+P  + R+++ +I  + +SR   +A   F  +LD  V   +   N+LL  + ++     
Sbjct: 19  SSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHL 78

Query: 156 SFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           + D   L FS N    E++ Y+  I++   C+A + +K   V++++E+    P+VV +  
Sbjct: 79  AADAYRLVFSSNS---EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 135

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           ++D   + GD E A  L   +   GL     TY  ++ GL ++G+    +E +++M   G
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V+P + ++  LI  +C  G++ E  K++ EMRHR +  ++V+++ LI    +  ++  A 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
             L +M+  G+ P+ + Y  +I GFC AG    A R+ +++   G  P VVTYN L+   
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K      A  L+ EM ERG+ P   T+T LI  +     ++KA +++  M      PD+
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI G+C +G++ +A+ L++ M   ++ PN V Y+++I  +C++G    A   L E
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  KG++PNI +Y+S I   C+ G   + +  L +M+   + P +  YN L
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 1/314 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    +Y  +I    ++ L   AL    +M+  G  P   T+N+LL  + K         
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             +E R + V  D+ +F  LI G C  G L+KA ++ + +      P++V Y +LIDG C
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + GD+++A  L+  +    +     TY++LI    + G  +D F F ++M   G+ P++ 
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN +I  YC  G VS+G K   +M   +V+ +++TYNTLI G  KE ++ +A +LL+ M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +   + P+V+TYN LI+GF   G   +A  +F ++ + G  P   TY  +I     AGNS
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566

Query: 402 KMASDLVREMEERG 415
           K A  L  EM +RG
Sbjct: 567 KEAFQLHDEMLQRG 580


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 248/470 (52%), Gaps = 9/470 (1%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P+    ++  ++ + +K +     +    QM  S +RP   T   L I +   C  ++  
Sbjct: 65  PLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYT---LTILINCLCHSNRDH 121

Query: 162 LFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           + F+ +      +  ++    +FG L+ G C    +  A ++ +++ +MGF+P+++ YT+
Sbjct: 122 VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTT 181

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           +I G CK G    A  L +K+ E G       Y  +I  L K+    +   F+ +M   G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + P++ TY+ ++H +CN G+++E   LF +M  R V  N VT+  L+ GLCKE  + EA 
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+ + M   G+ P+  TY+ L+DG+C   + D+A +LF+ +   G +PSV  YN+LI   
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K+     A  L+ EM +R +TP  VTY+ L+  F ++   + A +++  M   G  PD 
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY +L+ GLC  G++ EA +L  +M E+K+EP+  +YN++I G C  G    A  L   
Sbjct: 422 ITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSN 481

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
           +  KG+ P++ +Y+  I  L ++G   EA  +  +M+  G  P+   YN+
Sbjct: 482 LFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 234/491 (47%), Gaps = 13/491 (2%)

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSD-----QALFYFHQMLDSGVRPR 140
           RS L  + Q F +S+   T      SI +    S  ++      A+  F+Q+L  G+RP 
Sbjct: 10  RSFLFFIHQHFTTSTASTTNIS-PSSITNGGFCSNYNNLHSVADAVASFNQLL--GIRPL 66

Query: 141 SNT--FNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG--DLNKAF 195
                FN LL  ++K   +        + +   +  +VY+  ILI   C +    ++ AF
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
             L ++ ++G  P  V + +L++G C    I  A  LF +IG++G   +  TYT +I GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K G   +  +  +KM+  G  P +  YN +I   C + + +E    F EM  + +  NV
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY++++ G C   ++ EA  L  QM    + PN +T+  L+DG C  G   +A R+F  
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  NG  P   TY+ L+  +        A  L   M  +G  PS   Y ILI+   +S  
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A  + S M     +PD  TY  L+ G C  G  + A KLF  M    L P+ + Y++
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G CK G+   A RLL  M E  + P+I  Y+  I  +C  GK   A  L + +   G
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 556 LKPSVSLYNIL 566
           ++PSV  Y ++
Sbjct: 487 IQPSVVTYTVM 497



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 9/313 (2%)

Query: 89  LCHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
            C+L QL  ++S        N +  +  +  ++D   K  +  +A   F  M ++GV P 
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           + T+++L+         D+    F     K     V  + ILI G C++  LN+A  +L+
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS 375

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ +   +P+ V Y++L+ G C+ G  + A+ LF+++   GL+    TY++L+ GL K+G
Sbjct: 376 EMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHG 435

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              + F   + MQ + + P +  YN LI   CN GK+    +LF  +  + +  +VVTY 
Sbjct: 436 HLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYT 495

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I GL KE    EA  +  +M + G  PN  TYN  I GF   G+   A RL  ++   
Sbjct: 496 VMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGR 555

Query: 380 GQSPSVVTYNVLI 392
           G S    T+ +L+
Sbjct: 556 GFSADSSTFQMLL 568



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L++++     P T +  Y +++    ++     A   F +M   G+ P S T++ LL  +
Sbjct: 374 LSEMYDRDLTPDTVT--YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 152 IKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D+ + L  +    K+E  +  + ILI+G C  G L  A E+ + L   G  P+V
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V YT +I G  K G    A  +FRK+   G +    TY V I G  +NG   +     E+
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           M   G S    T+  L+    N+  +S 
Sbjct: 552 MVGRGFSADSSTFQMLLDLESNDEIISR 579


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/491 (32%), Positives = 251/491 (51%), Gaps = 14/491 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM---LDSGVRPRSNTFNSLL 148
           L    PS  + V+    Y +++ A  +    D+A      M        RP + ++  L+
Sbjct: 67  LLDALPSVRDAVS----YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122

Query: 149 IFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
             +      D+   L  S     V  DV ++G LI+G C+A +++KA E++ ++ E G  
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNVV+Y+SL+ G CK+G  E    +F ++ E G+      YT LI  L K G  K     
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
            + M   G+ P++ TYN LI+  C EG V E   +  +M  + VA +VVTYNTLI GL  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 328 EMRVQEAERLLDQMKMAG--ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            + + EA  LL++M      + PNV+T+N +I G CD G   +AF++   ++  G   ++
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN+LI    +    + A +L+ EM   G+ P   TY+ILI  F +   +++A ++ S 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M+  G  P+++ Y  L+  +C +G M+ A  LFN M +     + V Y+ MI G CK G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGD 481

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A  LL  + ++GL P+  +YS  I +  + G    A  +L QM   G  P V++++ 
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 566 L---YRAKNNI 573
           L   Y  K  I
Sbjct: 542 LIQGYSTKGEI 552



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 197/416 (47%), Gaps = 49/416 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSEN 167
           Y ++I     +   D+A+    +M +SG+ P    ++SLL    KS  + D G +F   +
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E DV  +  LI   C+ G   KA  V++ +   G  PNVV Y  LI+  CK G ++
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------NGVSPS 279
            A  + +K+ E G+     TY  LI GL       D  E  E M L        N V P+
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGL------SDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + T+N +I   C+ G++ + F++   M       N+VTYN LI GL +  +V++A  L+D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP---------------- 383
           +M   G+ P+  TY+ LI GFC   + D+A  L + ++  G  P                
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 384 ------------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                              VV Y+ +I    KAG+ K A +L++ + + G+TP  VTY+I
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +I+ F +S DME A  +   M  SGF PDV  +  LI G   KG + +  +L   M
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH---TYTVLI 252
           E  + L+ +    + V Y +++   C+ G  +RA  L R +      A +    +YTVL+
Sbjct: 63  EATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L  + L          M+  GV   + TY  LI   C+  +V +  +L  EM    + 
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV Y++L+ G CK  R ++  ++  +M   GI P+V+ Y  LID  C  G+  KA  +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + +   G  P+VVTYNVLI    K G+ K A  ++++M E+G+ P  VTY  LI     
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 433 SDDMEKAFEMYSLM--QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             +M++A  +   M   K+   P+V T+  +I GLC  G M++A ++   M ET    N 
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN++I G  +     +A+ L+ EM   GL P+  +YS  I   C+  +   AE LL+ 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 551 MLKLGLKPSVSLY 563
           M   G++P +  Y
Sbjct: 423 MRDRGIEPELFHY 435



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 4/330 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y  +I+   K     +A+    +M + GV P   T+N+L+  +      D+  WL     
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           R K  V+ +V +F  +I+G C+ G + +AF+V   +EE G   N+V Y  LI G  +   
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           + +A  L  ++  LGL     TY++LI G  K        +    M+  G+ P L+ Y  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C +G +     LF+EM +     +VV Y+T+I G CK   ++ A+ LL  +   G
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P+ +TY+ +I+ F  +G+ + A  +  Q+ ++G  P V  ++ LI+ +S  G      
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +L+REM  + I       + L  S V S++
Sbjct: 557 ELIREMITKNIALDSKIISTLSTSLVASNE 586



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS---PSVVTYN 389
           EA  LLD +       + ++YN ++   C  G  D+A  L   +         P+ V+Y 
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYT 119

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           VL+RA      +  A  L+R M   G+    VTY  LI     + +++KA E+   M +S
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P+V  Y  L+ G C  G  ++  K+F  M E  +EP+ V+Y  +I   CK G + +A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++  M  +GL PN+ +Y+  I  +C++G   EA  +L +M + G+ P V  YN L + 
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299

Query: 570 KNNI 573
            +++
Sbjct: 300 LSDV 303


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 223/410 (54%), Gaps = 4/410 (0%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           RP +++ N+LL  ++ +   D     F S  R +V  D+Y+F  +I G C  G L KA +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNG---DIERAKMLFRKIGELGLVATQHTYTVLIC 253
           V   ++  G +P+V  Y SLIDG CK G   ++    ML +++ E G+  T  T+ VLI 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  KN         +E+M+  G++ S+ TYN LI   C+EGKV EG KL +EM    ++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N +T+  ++ G CK+  + +A   +D M    + P+V+ Y  LIDG+   G+ + A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G SP+V TYN LI  FS++G+ + AS L+ EM+E+GI    VTY +LI +    
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++ KA ++   M + G  P+  TY  +I G C KGN+K A ++   M + +   N V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           N+ I  +C+ G    A  LL EM +K LVPN  +Y +    + + G  P+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 208/410 (50%), Gaps = 3/410 (0%)

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            +L   E+  +      S   L+ G   A  ++ A +          SP++  + ++I G
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISG 200

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE---FYEKMQLNGV 276
            C+ G + +A  + + I   GL  +  TY  LI G  K G   + +      ++M   G+
Sbjct: 201 LCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGI 260

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+  T+  LI+ YC     +   ++F+EM+ + +A +VVTYN+LI GLC E +V+E  +
Sbjct: 261 SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVK 320

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+++M+  G+SPN IT+  ++ GFC  G    A    + +      P VV Y +LI  + 
Sbjct: 321 LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYR 380

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G  + A  +   M ++GI+P+  TY  LI  F RS D   A  +   M++ G   DV 
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV 440

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY VLI  LC KG +++A KL + M E  LEPN + YN +I G+C +GN   A  +   M
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +     N+ +Y+  I   CQ GK  EA  LLN+ML   L P+   Y  +
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 186/364 (51%), Gaps = 3/364 (0%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+     +L+ G      ++ A+  FR      +    +T+  +I GL + G  +   + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEMRHREVACNVVTYNTLICG 324
            + ++  G++PS+ TYN LI  YC +G     +    L  EM    ++   VT+  LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            CK      A R+ ++MK  GI+ +V+TYN LI G C  G+ ++  +L  +++  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +T+  +++ F K G    A+D +  M ER + P  V YTILID + R   ME A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M K G SP+V TY  LI G    G+ + AS L + M E  +E + V YN++I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              +A++LL EM+E GL PN  +Y++ I   C  G    A  +  +M K   + +V  YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 565 ILYR 568
           +  +
Sbjct: 514 VFIK 517



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS  + N L+       +V    K F     R V+ ++ T+NT+I GLC+  ++++A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRA 394
              +K  G++P+V TYN LIDG+C  G     +    L  ++   G SP+ VT+ VLI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K  N+  A  +  EM+++GI  S VTY  LI        +E+  ++   M+  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T+G ++ G C KG M +A+   + M E  +EP+ V+Y ++I GY + G    A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M +KG+ PN+ +Y+  I    + G W  A  LL++M + G++  V  YN+L  A
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/491 (32%), Positives = 251/491 (51%), Gaps = 14/491 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM---LDSGVRPRSNTFNSLL 148
           L    PS  + V+    Y +++ A  +    D+A      M        RP + ++  L+
Sbjct: 67  LLDALPSVRDAVS----YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122

Query: 149 IFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
             +      D+   L  S     V  DV ++G LI+G C+A +++KA E++ ++ E G  
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNVV+Y+SL+ G CK+G  E    +F ++ E G+      YT LI  L K G  K     
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
            + M   G+ P++ TYN LI+  C EG V E   +  +M  + VA +VVTYNTLI GL  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 328 EMRVQEAERLLDQMKMAG--ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            + + EA  LL++M      + PNV+T+N +I G CD G   +AF++   ++  G   ++
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN+LI    +    + A +L+ EM   G+ P   TY+ILI  F +   +++A ++ S 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M+  G  P+++ Y  L+  +C +G M+ A  LFN M +     + V Y+ MI G CK G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGD 481

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A  LL  + ++GL P+  +YS  I +  + G    A  +L QM   G  P V++++ 
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 566 L---YRAKNNI 573
           L   Y  K  I
Sbjct: 542 LIQGYSTKGEI 552



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 197/416 (47%), Gaps = 49/416 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSEN 167
           Y ++I     +   D+A+    +M +SG+ P    ++SLL    KS  + D G +F   +
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E DV  +  LI   C+ G   KA  V++ +   G  PNVV Y  LI+  CK G ++
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------NGVSPS 279
            A  + +K+ E G+     TY  LI GL       D  E  E M L        N V P+
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGL------SDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + T+N +I   C+ G++ + F++   M       N+VTYN LI GL +  +V++A  L+D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP---------------- 383
           +M   G+ P+  TY+ LI GFC   + D+A  L + ++  G  P                
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 384 ------------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                              VV Y+ +I    KAG+ K A +L++ + + G+TP  VTY+I
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +I+ F +S DME A  +   M  SGF PDV  +  LI G   KG + +  +L   M
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH---TYTVLI 252
           E  + L+ +    + V Y +++   C+ G  +RA  L R +      A +    +YTVL+
Sbjct: 63  EATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L  + L          M+  GV   + TY  LI   C+  +V +  +L  EM    + 
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV Y++L+ G CK  R ++  ++  +M   GI P+V+ Y  LID  C  G+  KA  +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + +   G  P+VVTYNVLI    K G+ K A  ++++M E+G+ P  VTY  LI     
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 433 SDDMEKAFEMYSLM--QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             +M++A  +   M   K+   P+V T+  +I GLC  G M++A ++   M ET    N 
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN++I G  +     +A+ L+ EM   GL P+  +YS  I   C+  +   AE LL+ 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 551 MLKLGLKPSVSLY 563
           M   G++P +  Y
Sbjct: 423 MRDRGIEPELFHY 435



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 4/330 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y  +I+   K     +A+    +M + GV P   T+N+L+  +      D+  WL     
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           R K  V+ +V +F  +I+G C+ G + +AF+V   +EE G   N+V Y  LI G  +   
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           + +A  L  ++  LGL     TY++LI G  K        +    M+  G+ P L+ Y  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C +G +     LF+EM +     +VV Y+T+I G CK   ++ A+ LL  +   G
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P+ +TY+ +I+ F  +G+ + A  +  Q+ ++G  P V  ++ LI+ +S  G      
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +L+REM  + I       + L  S V S++
Sbjct: 557 ELIREMITKNIALDSKIISTLSTSLVASNE 586



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS---PSVVTYN 389
           EA  LLD +       + ++YN ++   C  G  D+A  L   +         P+ V+Y 
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYT 119

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           VL+RA      +  A  L+R M   G+    VTY  LI     + +++KA E+   M +S
Sbjct: 120 VLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES 179

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P+V  Y  L+ G C  G  ++  K+F  M E  +EP+ V+Y  +I   CK G + +A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++  M  +GL PN+ +Y+  I  +C++G   EA  +L +M + G+ P V  YN L + 
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299

Query: 570 KNNI 573
            +++
Sbjct: 300 LSDV 303


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 259/506 (51%), Gaps = 9/506 (1%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS------HAAAQTLILKIISGRITSS 81
           A+ ++N  +R G++    +++I++  L                  + +   I++     +
Sbjct: 169 AWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLIN 228

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           ++    LL    ++  S S    K  L  Y ++I+   K     +A   F++ML  G+ P
Sbjct: 229 AYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSP 288

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVL 198
            + T+N+LL+   ++ +F +    FS+   + V  D+ SF  LI      G L++A    
Sbjct: 289 DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYF 348

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             ++  G  P+ VIYT LI+G C+NG +  A  +  K+ E G       Y  ++ GL K 
Sbjct: 349 RDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKK 408

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            L  D    +++M   GV P   T+  LIH +C EG + +   LF  M  + +  ++VTY
Sbjct: 409 KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTY 468

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI G CK   +++A  L ++M    I PN I+Y  L++G+C+ G   +AFRL++++  
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P++VT N +I+ + ++G+   A + + +M   G+ P  +TY  LI+ FV+ + M+K
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK 588

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF + + M+  G  PDV TY V+++G C +G M+EA  +   M E  ++P+   Y  +I 
Sbjct: 589 AFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPN 524
           GY  + N   A R   EM ++G VP+
Sbjct: 649 GYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/596 (27%), Positives = 272/596 (45%), Gaps = 81/596 (13%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           L L ++ S   + AQTLIL++I     S      SL+         SS     + +++ +
Sbjct: 69  LNLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLI-------SMSSTCGVDNLVFDLL 121

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKV 171
           I +++++R  ++    F  +   G     N  NSLL  ++K    D  W  ++E  R  +
Sbjct: 122 IRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGI 181

Query: 172 ELDVYSFGI-----------------------------------LIKGCCEAGDLNKAFE 196
           EL+VY+  I                                   LI   C  G L +AFE
Sbjct: 182 ELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFE 241

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC--- 253
           V+N +   G  P +  Y ++I+G CK G   RAK +F ++  +GL     TY  L+    
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESC 301

Query: 254 ---------GLF-----------------------KNGLQKDGFEFYEKMQLNGVSPSLY 281
                     +F                       +NG       ++  M+ +G+ P   
Sbjct: 302 RNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  LI+ YC  G +SE  ++ D+M  +  A +VV YNT++ GLCK+  + +A  L D+M
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ P+  T+  LI G C  G   KA  LF  +      P +VTYN+LI  F K    
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A++L  EM  R I P+ ++Y IL++ +     + +AF ++  M + G  P + T   +
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTV 541

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G C  G++ +A +    M    + P+ + YN +I G+ K     +A  L+ +M  KGL
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            P++ +Y+  +   C+ G+  EAE++L +M++ G+ P  S Y  L   Y +++N++
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLK 657


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 224/444 (50%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           ++ +I  ++++R     L     M+D G+ P+  T + +L  +I+   F      F E  
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DVY +  +++  CE  D  +A EV+ ++E  G   +V  Y   I G CKN  + 
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +   GL A   TY  L+ GL K    + G E   +M   G  PS    + L+
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +G +   F L ++++   VA ++  YN LI  +CK+ ++ EAE L + M   G+ 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY+ LID FC  G+ D A     ++   G   +V  Y+ LI    K G  + A  L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM   G+ P+ V YT LI  + +  ++  AF +Y  M   G SP+ YT+  LI GLC 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M EA+KLF  M E  + PN+V YN++I G+CKEGN+ RA  LL EM EKGLVP+  +
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y   I  LC  G+  EA   +N +
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDL 591



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 246/504 (48%), Gaps = 46/504 (9%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R    +++  ++ R    AL  F +++ SG+RP    + +    V++S    K ++   E
Sbjct: 181 RTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTA----VVRSLCELKDFIRARE 236

Query: 167 NRCKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              ++E     L V ++ + I+G C+   + +A E+ N L   G   +V  Y +L+ G C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K  + E  + +  ++ E G V ++   + L+ GL K G     F+   K++  GV+PSL+
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN---------------------- 319
            YN LI+  C +GK+ E   LF+ M H+ +  N VTY+                      
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 320 -------------TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                        +LI G CK  +++ A+ L D+M   G+ PNV+ Y  LI G+C  GE 
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             AFRL++++   G SP+  T+  LI     A     A+ L  EM E  + P+EVTY +L
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+   +  +  +AFE+   M + G  PD YTY  LI GLC  G + EA +  N +   + 
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAE 545
           + N++ ++ ++ GYCKEG    AL    EM  +G+  ++  YS  I G+L Q  +    +
Sbjct: 597 KLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIID 656

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            LL QM   GL+P   LY  +  A
Sbjct: 657 -LLKQMHDQGLRPDNVLYTTMIDA 679



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 232/459 (50%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  H K      A   F +M+ +G++P    + SL+    K       +  + E  
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  + Y+F  LI G C A  + +A ++  ++ E    PN V Y  LI+G CK G+  
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++ E GLV   +TY  LI GL   G   +  EF   +Q      +   ++ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC EG++ +      EM  R VA ++V Y+ LI G+ ++   +    LL QM   G+ 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + Y  +ID    AG    AF L++ + S G  P+VVTY  LI    K G    A  L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM      P++ TY   +D      ++EKA +++ ++ + GF  +  TY +LI G C 
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCK 786

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA+++  +M ++ + P+ + Y+ +I+ YC+ G+   A++L   M  +G+ P+  +
Sbjct: 787 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVA 846

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I   C  G+  +A  L + M++ G+KP+ + YN L
Sbjct: 847 YNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 222/502 (44%), Gaps = 72/502 (14%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNK 193
           GV P    +N+L+  + K    D+    F+   ++     DV ++ ILI   C+ G L+ 
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV-TYSILIDSFCKRGKLDV 408

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A   L ++ E+G    V  Y+SLI G CK G +  AK LF ++   GL      YT LI 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  K G   + F  Y +M   G+SP+ YT+  LI   C+  +++E  KLF EM    V  
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VTYN LI G CKE     A  LLD+M   G+ P+  TY  LI G C  G   +A    
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 374 NQLK-----------------------------------SNGQSPSVVTYNVLIRAFSKA 398
           N L+                                     G +  +V Y+VLI    + 
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
            + +   DL+++M ++G+ P  V YT +ID+  ++ +++ AF ++ +M   G  P+V TY
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPND---------------------------- 490
             LI+GLC  G M +A  L   M  +   PN                             
Sbjct: 709 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 768

Query: 491 ------VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
                 V YN++I G+CK G    A  +L  M + G+ P+  SYS+ I   C+ G   EA
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             L   ML  G+ P    YN L
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFL 850



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 223/472 (47%), Gaps = 52/472 (11%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI---------LIKGCC 186
           G+R    T+ +L++ + K   F+ G    +E        +  FG          L+ G  
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNE--------MIEFGFVPSEAAVSNLVDGLR 331

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G++  AF+++N++++ G +P++ +Y +LI+  CK+G ++ A+ LF  +G  GL     
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY++LI    K G       F  KM   G+  ++Y Y+ LI  +C  GK+     LFDEM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  NVV Y +LI G CKE  +  A RL  +M   GISPN  T+  LI G C A   
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A +LF ++      P+ VTYNVLI    K GN+  A +L+ EM E+G+ P   TY  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 427 IDSFVRSDDMEKAFEMYSLMQKS-----------------------------------GF 451
           I     +  + +A E  + +Q                                     G 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           + D+  Y VLI+G+  + + +    L   M +  L P++V+Y  MI    K GN   A  
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           L   M  +G +PN+ +Y++ I  LC+ G   +AE+L  +ML     P+ + Y
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 743



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 179/433 (41%), Gaps = 76/433 (17%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+I  + K      A   +H+M   G+ P + TF +L+  +  +    +    F E 
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE- 520

Query: 168 RCKVELDV----YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              VE +V     ++ +LI+G C+ G+  +AFE+L+++ E G  P+   Y  LI G C  
Sbjct: 521 --MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 224 GDIERAKMLF-------RKIGELGLVATQH----------------------------TY 248
           G +  A+          +K+ E+   A  H                             Y
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           +VLI G+ +   ++   +  ++M   G+ P    Y  +I      G +   F L+D M  
Sbjct: 639 SVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMK-------------------------- 342
                NVVTY  LI GLCK   + +AE L  +M                           
Sbjct: 699 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 758

Query: 343 --------MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
                   + G   N +TYN LI GFC  G   +A  +   +  +G SP  ++Y+ +I  
Sbjct: 759 AIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + + G+ K A  L   M  RG+ P  V Y  LI     + ++ KAFE+   M + G  P+
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878

Query: 455 VYTYGVLIHGLCM 467
             TY  LIHG C+
Sbjct: 879 RATYNSLIHGTCL 891


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 240/456 (52%), Gaps = 1/456 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCK 170
           I+D  +   L+ Q L  F +M+ +   P     N +L I   K+       ++       
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +   V ++  ++   C+ G++ +A +++ +++E G  P+ V +  LI+G  K G++++AK
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L +++ + GL  + +TY  LICG  K GL  +    +E+M   GVSP++ ++N +++ +
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C EGK+S+  +   +M  + +  ++++YNTLI G C+   + EA  LLD+++   +S N+
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNI 412

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LIDG C  G+ + A +L   + + G  P VVTY VL+    K GN  MA +   E
Sbjct: 413 VTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDE 472

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M   G+ P +  YT  I   ++  D  KAF++   M   GF PDV TY V ++GLC  GN
Sbjct: 473 MLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN 532

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++EA +L   M      P+ V Y   +  + + G+      +  +M  +G  P + +Y+ 
Sbjct: 533 LEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTV 592

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I     +G+   A     +M + G+ P+V  YN+L
Sbjct: 593 LIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 197/379 (51%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L KA EV   + E G  P V  Y +++   CK G+++RA  L  K+ E G   ++ T+ V
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI GL K G  +      ++M   G+  S YTYN LI  YC +G + E   L++EM  R 
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           V+  V ++NT++ G CKE ++ +A + L  M    + P++I+YN LI GFC  G   +AF
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L ++L+    S ++VTYN LI    + G+ + A  L  +M  RGI P  VTYT+L++  
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +  +M  A E +  M   G +PD + Y   I G    G+  +A KL   M      P+ 
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDV 517

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN+ + G CK GN   A  LL +M   G VP+  +Y+S +    ++G   E   +   
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD 577

Query: 551 MLKLGLKPSVSLYNILYRA 569
           ML  G  P+V  Y +L  A
Sbjct: 578 MLSRGQTPTVVTYTVLIHA 596



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 7/231 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFF 164
           Y + I   LK   + +A     +ML  G  P   T+N   +FV   C      + G L  
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYN---VFVNGLCKLGNLEEAGELLQ 541

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              R     D  ++   +    E G L +  E+   +   G +P VV YT LI     NG
Sbjct: 542 KMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNG 601

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A   F ++ E G+V    TY VLI G  K        +F+ +MQ  G+ P+ YTY 
Sbjct: 602 RLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYT 661

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
            LI+E CN GK  E  +L+ +M  + +  +  T+  L+  L K+ +VQ  +
Sbjct: 662 ILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQ 712



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 109 YESIIDAH-LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y  +I AH L  RL D A+ YF +M + GV P   T+N L+    K    D+   FF E 
Sbjct: 590 YTVLIHAHALNGRL-DWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEM 648

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  + Y++ ILI   C  G   +A  +  Q+      P+   + +L+    K+  +
Sbjct: 649 QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV 708

Query: 227 ERAKML 232
           +  + +
Sbjct: 709 QAVQFI 714


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 231/439 (52%), Gaps = 4/439 (0%)

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           D G RP   T+N +L  + K   F + G ++       ++ DV ++GILI G C +GD++
Sbjct: 257 DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVD 316

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  V +++ + G   +  +Y SL+ G C+ G ++ A   +   G  GL     TY ++I
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMI 375

Query: 253 CGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            GLF +G+  +  E ++ ++ +    P   T+  LIH  C  G  ++ F +F+E R    
Sbjct: 376 KGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V +Y+++I GLC   R+ +A ++ ++M   G  PN   YN LI GFC    T  A R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +++++  NG SP+V+TYN LI    KA   + AS + REM E G TP   TY  LI    
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEPND 490
               ++ A  ++  +   G   DV  + +LIHGLC  G + EA  +F+ M E K   PN 
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN ++ G  + G   +A  L   + E GL P+I SY++ I  LC   +  E   LL++
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 551 MLKLGLKPSVSLYNILYRA 569
           +L  G+ P+V  +NIL RA
Sbjct: 676 VLSRGIIPTVITWNILVRA 694



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/584 (24%), Positives = 252/584 (43%), Gaps = 90/584 (15%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTP-RSLLCHLTQLFPS 98
           L   P  I  +L L+ S+  + +  A   L++       T  +F P + LL HL +   +
Sbjct: 6   LDPDPPPIHRLLELIKSEPDATAALAHLELLVS------TRPAFPPPQPLLFHLLRRLAT 59

Query: 99  SSNPVTK------------SRLYES----IIDAHLKSRLSDQALFYFHQMLDS-GVRPRS 141
           SS                  R  ES    ++ A  ++ + D AL  F  +    G  P  
Sbjct: 60  SSPSHLPRLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGI 119

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            + N+LL   +++  F     FF+       L   +FG  I                   
Sbjct: 120 RSHNALLDAFVRARRFSDADAFFAS------LSHGAFGRRI------------------- 154

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
                +PN+  Y  ++   C  GD++RA  LF  +    +   + TY+ L+CGL K    
Sbjct: 155 -----APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRL 209

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNT 320
               +  ++M  + V P +  YN L+      G+  +  +++D++ +      N+ TYN 
Sbjct: 210 DHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++ GLCK  R +E   + ++M    + P+VITY  LI G C +G+ D A R+++++   G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMA---------------------------SDLVREM-- 411
                  YN L++ F +AG  + A                           S +V E   
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389

Query: 412 ------EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
                 ++    P  VT+  LI    ++    KAF ++   + SG   DV++Y  +I+GL
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G + +A K++  M +   +PN  +YN +I G+C+   +  A+R+  +M + G  P +
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y++ I  LC+  K+ EA  +  +M++ G  P ++ Y  L R 
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 198/398 (49%), Gaps = 2/398 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   D A   + +++ +G+   +  +NSL+    ++    + W F+    
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIE 227
                ++ ++ I+IKG  ++G +++A E+ + LE ++   P+ V + +LI G C+NG   
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +F +    G      +Y+ +I GL   G   D  + YEKM  +G  P+ + YN LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   + S+  +++ +M     +  V+TYNTLI GLCK  + QEA  +  +M   G +
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ TY  LI G     + D A  ++ Q+   G    V+ +N+LI     AG    A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 408 VREM-EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
             +M E++   P+ VTY  L+D    +  ++KA  +++ + + G  PD+ +Y   I GLC
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
               + E  +L + +    + P  + +N+++    K G
Sbjct: 662 SCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 164/329 (49%), Gaps = 3/329 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           R Y  +I     S + D+A+  +  +  D    P + TF +L+  + ++   +K +  F 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E R    +LDV+S+  +I G C  G L  A +V  ++++ G  PN  IY +LI G C+  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
               A  ++ K+ + G   T  TY  LI GL K    ++      +M  NG +P + TY 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK-M 343
            LI    ++ K+ +   ++ ++ ++ +  +V+ +N LI GLC   +V EA  +   MK  
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               PN++TYN L+DG  + G  DKA  L+  +  +G  P +++YN  I+          
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVR 432
              L+ E+  RGI P+ +T+ IL+ + ++
Sbjct: 669 GIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 8/232 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y ++I    +   +  A+  + +M D+G  P   T+N+L+  + K+  + +     S
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA---SS 530

Query: 166 ENRCKVE----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             R  VE     D+ ++G LI+G      ++ A  +  Q+   G   +V+++  LI G C
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590

Query: 222 KNGDIERAKMLFRKIGEL-GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
             G ++ A  +F  + E         TY  L+ GL++ G        +  +  +G+ P +
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +YN  I   C+  ++ EG +L DE+  R +   V+T+N L+  + K   +Q
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 224/444 (50%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           ++ +I  ++++R     L     M+D G+ P+  T + +L  +I+   F      F E  
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DVY +  +++  CE  D  +A EV+ ++E  G   +V  Y   I G CKN  + 
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +   GL A   TY  L+ GL K    + G E   +M   G  PS    + L+
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +G +   F L ++++   VA ++  YN LI  +CK+ ++ EAE L + M   G+ 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY+ LID FC  G+ D A     ++   G   +V  Y+ LI    K G  + A  L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM   G+ P+ V YT LI  + +  ++  AF +Y  M   G SP+ YT+  LI GLC 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M EA+KLF  M E  + PN+V YN++I G+CKEGN+ RA  LL EM EKGLVP+  +
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y   I  LC  G+  EA   +N +
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDL 591



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/441 (33%), Positives = 224/441 (50%), Gaps = 12/441 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNK 193
           GV P    +N+L+  + K    D+    F+   ++     DV ++ ILI   C+ G L+ 
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV-TYSILIDSFCKRGKLDV 408

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A   L ++ E+G    V  Y+SLI G CK G +  AK LF ++   GL      YT LI 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  K G   + F  Y +M   G+SP+ YT+  LI   C+  +++E  KLF EM    V  
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VTYN LI G CKE     A  LLD+M   G+ P+  TY  LI G C  G   +A    
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 374 NQLKSNGQS--------PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           N L+   Q         P+VVTY  LI    K G    A  L REM      P++ TY  
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
            +D      ++EKA +++ ++ + GF  +  TY +LI G C  G ++EA+++  +M ++ 
Sbjct: 649 FLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + P+ + Y+ +I+ YC+ G+   A++L   M  +G+ P+  +Y+  I   C  G+  +A 
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L + M++ G+KP+ + YN L
Sbjct: 768 ELRDDMMRRGVKPNRATYNSL 788



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/438 (32%), Positives = 220/438 (50%), Gaps = 10/438 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y ++I++  K    D+A   F+ M   G+ P   T++ L+    K    D    F  + 
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++  VY +  LI G C+ G L  A  + +++   G  PNVVIYTSLI G CK G++
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++   G+    +T+T LI GL       +  + + +M    V P+  TYN L
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK---- 342
           I  +C EG     F+L DEM  + +  +  TY  LI GLC   RV EA   ++ ++    
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596

Query: 343 ----MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
               + G  PNV+TY  LI+G C  G  DKA  L  ++ ++   P+  TY   +   +  
Sbjct: 597 KLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSE 656

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           GN + A  L   + E G   + VTY ILI  F +   +++A E+   M  SG SPD  +Y
Sbjct: 657 GNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISY 715

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             +I+  C +G++KEA KL+ SM    + P+ V YN +I+G C  G   +A  L  +M  
Sbjct: 716 STIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR 775

Query: 519 KGLVPNIASYSSTIGVLC 536
           +G+ PN A+Y+S I   C
Sbjct: 776 RGVKPNRATYNSLIHGTC 793



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 243/511 (47%), Gaps = 53/511 (10%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R    +++  ++ R    AL  F +++ SG+RP    + +    V++S    K ++   E
Sbjct: 181 RTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTA----VVRSLCELKDFIRARE 236

Query: 167 NRCKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              ++E     L V ++ + I+G C+   + +A E+ N L   G   +V  Y +L+ G C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K  + E  + +  ++ E G V ++   + L+ GL K G     F+   K++  GV+PSL+
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN---------------------- 319
            YN LI+  C +GK+ E   LF+ M H+ +  N VTY+                      
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 320 -------------TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                        +LI G CK  +++ A+ L D+M   G+ PNV+ Y  LI G+C  GE 
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             AFRL++++   G SP+  T+  LI     A     A+ L  EM E  + P+EVTY +L
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW--ET 484
           I+   +  +  +AFE+   M + G  PD YTY  LI GLC  G + EA +  N +   + 
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596

Query: 485 KLE------PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           KL       PN V Y  +I G CK G   +A  L  EM     +PN  +Y+  +  L  +
Sbjct: 597 KLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSE 656

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G   +A + L+ +L  G   +   YNIL R 
Sbjct: 657 GNIEKA-IQLHDVLLEGFLANTVTYNILIRG 686



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 185/370 (50%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V+  + + G  P +   + +++G  +      A  LF +I   GL    + YT ++  L 
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +        E   +M+ +G   S+ TYN  I   C   +V E  ++ + + ++ +  +V 
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY TL+ GLCK    +  E ++++M   G  P+    + L+DG    G    AF L N++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K  G +PS+  YN LI +  K G    A  L   M  +G+ P++VTY+ILIDSF +   +
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A      M + G    VY Y  LI G C  G ++ A  LF+ M    L+PN V+Y  +
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I GYCKEG  + A RL  EM  KG+ PN  ++++ I  LC   +  EA  L  +M++  +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 557 KPSVSLYNIL 566
            P+   YN+L
Sbjct: 527 IPNEVTYNVL 536



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 194/430 (45%), Gaps = 54/430 (12%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           LFP   N VT    Y  +ID+  K    D AL +  +M + G++     ++SL+    K 
Sbjct: 386 LFP---NDVT----YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 155 CSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
                    F E   N  K  + +Y+   LI G C+ G+L+ AF + +++   G SPN  
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYT--SLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            +T+LI G C    +  A  LF ++ E  ++  + TY VLI G  K G     FE  ++M
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV------AC--NVVTYNTLIC 323
              G+ P  YTY  LI   C+ G+VSE  +  ++++  +        C  NVVTY  LI 
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALIN 616

Query: 324 GLCKEMRVQEAERLLDQMK----------------------------------MAGISPN 349
           GLCK   + +AE L  +M                                   + G   N
Sbjct: 617 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLAN 676

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +TYN LI GFC  G   +A  +   +  +G SP  ++Y+ +I  + + G+ K A  L  
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M  RG+ P  V Y  LI     + ++ KAFE+   M + G  P+  TY  LIHG C+  
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMS 796

Query: 470 NMKEASKLFN 479
           ++   +  F+
Sbjct: 797 SVSSTADYFS 806


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 169/587 (28%), Positives = 277/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 41  REGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFN-RA 99

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P + +  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 100 ASRAQGPRVL------------SPTSYT--YAILMDCCTRAHRPELALAFFGQLLRTGLR 145

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
             +   + LL    ++   D+    L           DV+S+ IL+K  C  G   +A +
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SP+VV Y ++IDG  K GD+ +A  LF+++ + G+     TY+ ++  
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M   GV P  +TYN LI+ Y + G+  E  ++F EMR + +  +
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VV  NTL+  LCK  +++EA  + D M M G +P+V +Y  +++G+   G       LF+
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P + T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G  PD Y Y  LI G C  G++ +A +L                 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P+ VVYNM++ GYC  G   +ALR+   M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN+  Y + +   C+ G+  E   L  +ML+ G+KPS  LYNI+
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F +M+  G+ P   T++S++  + K+ + DK   F  +  
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L D +++  LI G    G   +A  V  ++      P+VV   +L+   CK G I+
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +YT+++ G    G   D  + ++ M  +G++P +YT+N LI
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G+ 
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   Y+ LI GFC  G   KA  L +++ +NG    +V +  +I    K G    A ++
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G+ P  V Y +L+D +     MEKA  ++  M  +G  P+V  YG L++G C 
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  M +  ++P+ ++YN++I G  + G +  A     EM E G+  N  +
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  +  L ++  + EA  L  ++  + +K  +   N +
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 233/496 (46%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++ A  K+R  D+A  +  QM++ GV P + T+N+L+     +  + +    F E R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG--- 224
            +  L DV +   L+   C+ G + +A +V + +   G +P+V  YT +++G    G   
Sbjct: 319 RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378

Query: 225 ----------------DI----------------ERAKMLFRKIGELGLVATQHTYTVLI 252
                           DI                ++A ++F ++ + G+     TY  +I
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV P  Y Y+CLI  +C  G + +  +L  E+ +  + 
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V + ++I  LCK  RV +A+ + D     G+ P+ + YN L+DG+C  G+ +KA R+
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM ++GI PS + Y I+ID    
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + +  TY +++ GL       EA  LF  +    ++ + + 
Sbjct: 619 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 678

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++  GLVP   +YS  I  L ++G   EAE + + M 
Sbjct: 679 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQ 738

Query: 553 KLGLKPSVSLYNILYR 568
             G +P   L N + R
Sbjct: 739 NAGCEPDSRLLNHVVR 754



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+  V ++  +I   C 
Sbjct: 384 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G  P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +  +I  L K G   D    ++     G+ P    YN L+  YC  GK+ +  ++FD M 
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  NVV Y TL+ G CK  R+ E   L  +M   GI P+ I YN +IDG  +AG T 
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G + +  TY++++R   K      A  L +E+    +    +T   +I
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 683

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               ++  +E+A ++++ + +SG  P   TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 684 AGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCE 743

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           P+  + N ++    K+    RA   L +++E+
Sbjct: 744 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 207/444 (46%), Gaps = 3/444 (0%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFH 130
           + S  I  + +  +  L  +T LF           +Y    +I A+    + D+A+  F+
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C  G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA E+++++   G   ++V + S+I+  CK G +  A+ +F     +GL      Y 
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G    G  +     ++ M   G+ P++  Y  L++ YC  G++ EG  LF EM  +
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  + + YN +I GL +  R   A+    +M  +GI+ N  TY+ ++ G       D+A
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF +L++      ++T N +I    +    + A DL   +   G+ P  VTY+I+I +
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++   +E+A +M+S MQ +G  PD      ++  L  K  +  A    + + E      
Sbjct: 721 LLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 780

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
            +   +++  +  +G     +R L
Sbjct: 781 HLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ YTY  L+ + C      E     F ++    +  + +  + L+ G C+  R  EA
Sbjct: 109 LSPTSYTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +YN L+   C+ G++ +A  L   +   G   SP VV YN +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY+ ++ +  ++  M+KA      M   G 
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD +TY  LI+G    G  KEA ++F  M    + P+ V  N ++   CK G    A  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P +  +N+L +A  
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 572 N 572
           N
Sbjct: 408 N 408


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 219/417 (52%), Gaps = 1/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++   L++   D+A   F  M   GV P   +FN L+    ++   ++   F+ E R
Sbjct: 232 YNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR 291

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  DV SF  LI      G+++ A E L ++ E G  P+ VIYT +I G C+ G + 
Sbjct: 292 GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++   G +    TY  L+ GL K     D  E   +M+  GV P L T+  LI
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC +G + +  + FD +  + +  ++VTYNTLI G+C++  + +A  L D M    I 
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY+ LID  C+ G+ D AF   +++ + G  P+++TYN +I+ + ++GN       
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M    + P  +TY  LI  +V+   M +AF +  +M+     PD  TY ++I G  +
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSV 591

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            GNM+EA  ++  M    +EP+   Y  MI G+   GNS ++ +L  EM +KGL P+
Sbjct: 592 HGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 240/452 (53%), Gaps = 1/452 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           +  ++DA  ++   + A+     M+  G++P   T+NS+L  ++++  +DK   +F + +
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C V  DV SF +LI G C AG+L +A     ++     +P+VV ++ LI    + G+++
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    R++ E GL+     YT++I G  + GL  +     ++M   G  P + TYN L+
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C E ++S+  +L +EM+ R V  ++ T+ TLI G C++  +++A +  D +    + 
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN LIDG C  G+  KA  L++ + S    P+ VTY++LI +  + G    A   
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +GI P+ +TY  +I  + RS ++ K  +    M+     PD+ TY  LIHG   
Sbjct: 497 LDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVK 556

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G M EA  L   M    ++P+ V YNM+I G+   GN   A  +  +M  +G+ P+  +
Sbjct: 557 EGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYT 616

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           Y S I      G   ++  L ++ML+ GL P 
Sbjct: 617 YMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 247/474 (52%), Gaps = 11/474 (2%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           +S+P  + ++++ +I  + +SR   +A   F  +LD  V   +   N+LL  + ++    
Sbjct: 82  ASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRA---- 137

Query: 159 KGWLFFSENRCKV------ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
            GW   + +  ++      E++ Y+  I++   C+     +   V++++E+    P+VV 
Sbjct: 138 -GWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVT 196

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           +  ++D   + GD+E A  L   +   G+     TY  ++ GL +NG      E +  M 
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             GV+P + ++N LI  +C  G++ E  + + EMR R V  +VV+++ LI    +   + 
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
            A   L +M+  G+ P+ + Y  +I GFC AG   +A R+ +++ + G  P VVTYN L+
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               K      A +L+ EM+ERG+ P   T+T LI  + R  ++EKA + +  +      
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD+ TY  LI G+C +G++ +A++L++ M   ++ PN V Y+++I  +C++G    A   
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L EM  KG+VPNI +Y+S I   C+ G   + +  L +M    + P +  YN L
Sbjct: 497 LDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 213/433 (49%), Gaps = 36/433 (8%)

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E RC V  DV +  +++     AGD+  A  +++ +   G  P +V Y S++ G  +NG 
Sbjct: 186 EKRC-VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGR 244

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++A+ +FR +   G+     ++ +LI G  + G  ++   FY++M+   V+P + +++C
Sbjct: 245 WDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSC 304

Query: 286 LI------------HEY-----------------------CNEGKVSEGFKLFDEMRHRE 310
           LI             EY                       C  G + E  ++ DEM    
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +VVTYNTL+ GLCKE R+ +AE LL++MK  G+ P++ T+  LI G+C  G  +KA 
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + F+ +      P +VTYN LI    + G+   A++L  +M  R I P+ VTY+ILIDS 
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
                ++ AF     M   G  P++ TY  +I G C  GN+ +  +    M   K+ P+ 
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN +I GY KEG  + A  LL  M  + + P+  +Y+  I      G   EA+ +  +
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604

Query: 551 MLKLGLKPSVSLY 563
           M   G++P    Y
Sbjct: 605 MGARGIEPDRYTY 617


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 216/393 (54%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  L+ G C    +  A ++ +++ +MG  P+V+ Y+++I+G CK G+   A  L +K+
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G       Y  +I  L K+ L  +  +F+ +M   G+ P ++TY+ ++H +CN G+V
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +E   LF +M  R V  N VT+  LI GLCK+  + EA  + + M   G+ P+V TYN L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG+C   + D+A +LFN +   G +P+V +YN+LI    K+G    A  L+ EM  + +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP   TY+ L+  F +    ++A E+   M   G  P++ TY +++ GLC  G++ EA +
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L  +M E+K+EPN  +Y ++I G C  G    A  L   +  KG+ P + +Y+  I  L 
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   EA  L  +M   G  P+   YN++ + 
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 233/436 (53%), Gaps = 1/436 (0%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M   G++P   TFN+LL     K+   D   LF    +   E DV ++  +I G C+ G+
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
              A ++L ++EE G  PNVV Y ++ID  CK+  +  A   F ++ + G+     TY+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++ G    G   +    +++M    V P+  T+  LI   C +  +SE + +F+ M  + 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +V TYN L+ G C   ++ EA++L + M   G +PNV +YN LI+G C +G  D+A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L  ++     +P + TY+ L+R F + G  + A +L++EM   G+ P+ +TY+I++D  
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +++AFE+   MQ+S   P+++ Y +LI G+C  G ++ A +LF++++   ++P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V Y +MI G  K G S  A  L  EM   G +PN  +Y+  I    ++G  P A  L+ +
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 551 MLKLGLKPSVSLYNIL 566
           M+  G     S + +L
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 165/321 (51%), Gaps = 1/321 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI+         ++A   F QM++  V P   TF  L+  + K     + WL F    
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +E DVY++  L+ G C    +++A ++ N ++  G +PNV  Y  LI+G CK+G I+
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK L  ++    L     TY+ L+ G  + G  ++  E  ++M   G+ P+L TY+ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E F+L   M+  ++  N+  Y  LI G+C   +++ A  L   + + GI 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P V+TY  +I G    G +++A  LF ++  NG  P+  TYNV+I+ F + G++  A  L
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 408 VREMEERGITPSEVTYTILID 428
           + EM  +G +    T+ +L D
Sbjct: 418 IEEMVGKGFSADSSTFRMLSD 438


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 231/439 (52%), Gaps = 4/439 (0%)

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           D G RP   T+N +L  + K   F + G ++       ++ DV ++GILI G C +GD++
Sbjct: 257 DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVD 316

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  V +++ + G   +  +Y SL+ G C+ G ++ A   +   G  GL     TY ++I
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMI 375

Query: 253 CGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            GLF +G+  +  E ++ ++ +    P   T+  LIH  C  G  ++ F +F+E R    
Sbjct: 376 KGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V +Y+++I GLC   R+ +A ++ ++M   G  PN   YN LI GFC    T  A R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +++++  NG SP+V+TYN LI    KA   + AS + REM E G TP   TY  LI    
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEPND 490
               ++ A  ++  +   G   DV  + +LIHGLC  G + EA  +F+ M E K   PN 
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN ++ G  + G   +A  L   + E GL P+I SY++ I  LC   +  E   LL++
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 551 MLKLGLKPSVSLYNILYRA 569
           +L  G+ P+V  +NIL RA
Sbjct: 676 VLSRGIIPTVITWNILVRA 694



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 250/571 (43%), Gaps = 78/571 (13%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
           ++  P + + +  L L   +  +    Q L+  ++    TSS   P  L C L  L P  
Sbjct: 20  IKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSS---PSHLPC-LLNLLPRL 75

Query: 100 SNPVTKSRLYES----IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKS 154
            +   + R  ES    ++ A  ++ + D AL  F  +    G  P   + N+LL   +++
Sbjct: 76  RH---RPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRA 132

Query: 155 CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
             F     FF+       L   +FG  I                        +PN+  Y 
Sbjct: 133 RRFSDADAFFAS------LSHGAFGRRI------------------------APNLQTYN 162

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            ++   C  GD++RA  LF  +    +     TY+ L+CGL K        +  ++M  +
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRS 222

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQE 333
           GV P +  YN L+      G+  +  +++D++ +      N+ TYN ++ GLCK  R +E
Sbjct: 223 GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
              + ++M    + P+VITY  LI G C +G+ D A R+++++   G       YN L++
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342

Query: 394 AFSKAGNSKMA---------------------------SDLVREM--------EERGITP 418
            F +AG  + A                           S +V E         ++    P
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP 402

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             VT+  LI    ++    KAF ++   + SG   DV++Y  +I+GLC  G + +A K++
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +   +PN  +YN +I G+C+   +  A+R+  +M + G  P + +Y++ I  LC+ 
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K+ EA  +  +M++ G  P ++ Y  L R 
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRG 553



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 198/398 (49%), Gaps = 2/398 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   D A   + +++ +G+   +  +NSL+    ++    + W F+    
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIE 227
                ++ ++ I+IKG  ++G +++A E+ + LE ++   P+ V + +LI G C+NG   
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +F +    G      +Y+ +I GL   G   D  + YEKM  +G  P+ + YN LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   + S+  +++ +M     +  V+TYNTLI GLCK  + QEA  +  +M   G +
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ TY  LI G     + D A  ++ Q+   G    V+ +N+LI     AG    A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 408 VREM-EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
             +M E++   P+ VTY  L+D    +  ++KA  +++ + + G  PD+ +Y   I GLC
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
               + E  +L + +    + P  + +N+++    K G
Sbjct: 662 SCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 164/329 (49%), Gaps = 3/329 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           R Y  +I     S + D+A+  +  +  D    P + TF +L+  + ++   +K +  F 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E R    +LDV+S+  +I G C  G L  A +V  ++++ G  PN  IY +LI G C+  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
               A  ++ K+ + G   T  TY  LI GL K    ++      +M  NG +P + TY 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK-M 343
            LI    ++ K+ +   ++ ++ ++ +  +V+ +N LI GLC   +V EA  +   MK  
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               PN++TYN L+DG  + G  DKA  L+  +  +G  P +++YN  I+          
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVR 432
              L+ E+  RGI P+ +T+ IL+ + ++
Sbjct: 669 GIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 8/232 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y ++I    +   +  A+  + +M D+G  P   T+N+L+  + K+  + +     S
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA---SS 530

Query: 166 ENRCKVE----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             R  VE     D+ ++G LI+G      ++ A  +  Q+   G   +V+++  LI G C
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590

Query: 222 KNGDIERAKMLFRKIGEL-GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
             G ++ A  +F  + E         TY  L+ GL++ G        +  +  +G+ P +
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +YN  I   C+  ++ EG +L DE+  R +   V+T+N L+  + K   +Q
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 170/587 (28%), Positives = 280/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  +    SS +  +   L + + + R 
Sbjct: 39  REGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFN-RA 97

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P   S  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 98  ASRAQGPRVL------------SPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A +
Sbjct: 144 VDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SP+VV Y ++IDG  K GD+ +A  LF+++ + G+     TY+ ++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M   GV P+ +TYN LI+ Y + G+  E  ++F EMR + +  +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+N L+  LCK  +++EA  + D M M G +P+V +YN +++G+   G       LF+
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P + T+NVLI+A++  G    A  +  EM + G+ P+ +TYT +I +  R  
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G +PD Y Y  LI G C  G++ +A +L                 
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P  VVY+M++ GYC  G   +ALR+   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN   Y + +   C+ G+  E   L  +ML+ G+KPS  LYNI+
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 237/496 (47%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++ A  K+R  D+A  +  QM++ GV P + T+N+L+     +  + +    F E R
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-------- 219
            +  L DV +F +L+   C+ G + +A +V + +   G +P+V  Y  +++G        
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 220 ------------------CCKN---------GDIERAKMLFRKIGELGLVATQHTYTVLI 252
                             C  N         G +++A ++F ++ + G+     TYT +I
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y Y+CLI  +C  G + +  +L  E+ +  + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  RV +A+ + D     G+ P  + Y+ L+DG+C  G+ +KA R+
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+ V Y  L+  + K G       L REM ++GI PS + Y I+ID    
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + +  TY +++ GL       EA  LF  +    ++ + + 
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 676

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++  GLVP + +YS  I  L ++G   EAE + + M 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 553 KLGLKPSVSLYNILYR 568
             G +P   L N + R
Sbjct: 737 NAGCEPDSRLLNHVVR 752



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 227/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F +M+  G+ P   T++S++  + K+ + DK   F  +  
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L + +++  LI G    G   +A  V  ++      P+VV +  L+   CK G I+
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +Y +++ G    G   D  + ++ M  +G++P + T+N LI
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y N G + +   +F+EMR   V  NV+TY T+I  LC+  ++ +A    +QM   G++
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   Y+ LI GFC  G   KA  L +++ +NG    +V ++ +I    K G    A ++
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G+ P+ V Y++L+D +     MEKA  ++  M  +G  P+   YG L++G C 
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  M +  ++P+ ++YN++I G  + G +  A     EM E G+  N  +
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  +  L ++  + EA  L  ++  + +K  +   N +
Sbjct: 642 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 680



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 193/392 (49%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+ +V ++  +I   C 
Sbjct: 382 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G +P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVL 501

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++ +I  L K G   D    ++     G+ P+   Y+ L+  YC  GK+ +  ++FD M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N V Y TL+ G CK  R+ E   L  +M   GI P+ I YN +IDG  +AG T 
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G + +  TY++++R   K      A  L +E+    +    +T   +I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 681

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               ++  +E+A ++++ + +SG  P V TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           P+  + N ++    K+    RA   L +++E+
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 212/446 (47%), Gaps = 7/446 (1%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFP----SSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           + S  I  + +  +  L  +T LF         PV  +  +  +I A+    + D+A+  
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT--FNVLIKAYANCGMLDKAMII 416

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F++M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C 
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L KA E+++++   G   ++V+++S+I+  CK G +  A+ +F     +GL  T   
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y++L+ G    G  +     ++ M   G+ P+   Y  L++ YC  G++ EG  LF EM 
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  + + YN +I GL +  R   A+    +M  +GI+ N  TY+ ++ G       D
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF +L++      ++T N +I    +    + A DL   +   G+ P  VTY+I+I
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            + ++   +E+A +M+S MQ +G  PD      ++  L  K  +  A    + + E    
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLL 513
              +   +++  +  +G     +R L
Sbjct: 777 LEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  +++  N L+ G C+  R  EA
Sbjct: 107 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 165

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP VV YN +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTV 225

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY+ ++ +  ++  M+KA      M   G 
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ +TY  LI+G    G  KEA ++F  M    + P+ V +NM++   CK G    A  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P +  +N+L +A  
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405

Query: 572 N 572
           N
Sbjct: 406 N 406


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 255/480 (53%), Gaps = 19/480 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I  +      ++A      M  SGV P    +N+++  + K+   ++   +  E 
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + ++ D  +FG  I G  + G + +A +  +++ + G  PN  +YT LI+G  K G++
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +FR +  LG++    T +  I GL KNG  ++  + + +++  G+ P ++TY+ L
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C +G+V + F+L DEM  + +A N+  YN L+ GLCK   +Q A +L D M   G+
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY+ +IDG+C +    +AF LF+++ S G  P    YN L+    K G+ + A +
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L REM ++G   + +++  LID + +S  +++A +++  M      PD  TY  +I   C
Sbjct: 487 LFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545

Query: 467 MKGNMKEASKLFNSMWETKL-----------------EPNDVVYNMMIFGYCKEGNSYRA 509
             G M+EA+ LF  M E  L                 +P++V Y ++I+ +CKE N   A
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +L  E+  KG++     +   I  LC+     EA  LL++M +LGLKPS++  + L R+
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 665



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 247/493 (50%), Gaps = 37/493 (7%)

Query: 111 SIIDAHL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-R 168
           +II A L +++  ++A   F +M  +G++P  N  ++L+   ++    D+          
Sbjct: 14  TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 73

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C + +++ ++ +LI G C+ G + KA E+L  +  +G  PN   +  LI+G C+  ++ R
Sbjct: 74  CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGR 133

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  ++ +  LV +  +Y  +I GL          +  EKM  +G+ P++  Y+ LI 
Sbjct: 134 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 193

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y +EG++ E  +L D M    VA ++  YN +I  L K  +++EA   L +++  G+ P
Sbjct: 194 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 253

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +T+   I G+   G+  +A + F+++  +G  P+   Y VLI    KAGN   A  + 
Sbjct: 254 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 313

Query: 409 R-----------------------------------EMEERGITPSEVTYTILIDSFVRS 433
           R                                   E++E+G+ P   TY+ LI  F + 
Sbjct: 314 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 373

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++EKAFE++  M   G +P+++ Y  L+ GLC  G+++ A KLF+ M E  LEP+ V Y
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + MI GYCK  N   A  L  EM  KG+ P+   Y++ +   C++G   +A  L  +ML+
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493

Query: 554 LGLKPSVSLYNIL 566
            G   ++S   ++
Sbjct: 494 KGFATTLSFNTLI 506



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 221/436 (50%), Gaps = 1/436 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGD 190
           M + G+ P + T+  +   + ++   ++  L F E  +  ++ D  +   LI G    GD
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++   + + +   G   N++ Y  LI G CK G +E+A  + + +  LG      T+ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI G  +        E  ++M+   + PS  +Y  +I+  C+   +S   KL ++M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  NVV Y+TLI G   E R++EA RLLD M  +G++P++  YN +I     AG+ ++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
               +++  G  P  VT+   I  +SK G    A+    EM + G+ P+   YT+LI+  
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++ ++ +A  ++  +   G  PDV T    IHGL   G ++EA K+F+ + E  L P+ 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             Y+ +I G+CK+G   +A  L  EM  KG+ PNI  Y++ +  LC+ G    A  L + 
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 551 MLKLGLKPSVSLYNIL 566
           M + GL+P    Y+ +
Sbjct: 421 MPEKGLEPDSVTYSTM 436



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 244/479 (50%), Gaps = 29/479 (6%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +G++T ++     +L H   L P+  NP     LY  +I+ H K+    +AL  F  +  
Sbjct: 268 TGKMTEAAKYFDEMLDH--GLMPN--NP-----LYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
            GV P   T ++ +  ++K+    +    FSE + K +  DV+++  LI G C+ G++ K
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AFE+ +++   G +PN+ IY +L+DG CK+GDI+RA+ LF  + E GL     TY+ +I 
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  K+    + F  + +M   GV P  + YN L+H  C EG + +   LF EM  +  A 
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA- 497

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
             +++NTLI G CK  ++QEA +L  +M    I P+ +TY  +ID  C AG+ ++A  LF
Sbjct: 498 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++    Q  +++   V                L  +M  +G+ P EVTY ++I +  + 
Sbjct: 558 KEM----QERNLIVDTVFA--------------LFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D++ +AF++   +   G       + +LI  LC + ++ EASKL + M E  L+P+    
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + ++  + + G    A R+   +   GLVP+  +    +     D    +A  L+ Q++
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 160/515 (31%), Positives = 254/515 (49%), Gaps = 14/515 (2%)

Query: 58  MSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHL 117
           ++ H H AA  L++ I +  I     T R  LC L   F  SS+       Y  ++ +  
Sbjct: 3   INPHHHTAAANLLVPITTATIN----TQRVNLCPLKFFFVRSSSRSVAD--YNIVLQSLC 56

Query: 118 KSRLSDQALFYFH-QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDV 175
           ++  + +AL  F  +M   GV P   T+N+++  + KS     G   F E  +     DV
Sbjct: 57  RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDV 116

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  LI   C+AGDL +A  +   +   G  PNVV Y+ LI+G CK G I+ A+ L ++
Sbjct: 117 VTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 176

Query: 236 IGE--LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYC 291
           +      ++    TY   + GL K  +  +  E    ++     VSP   T++ LI   C
Sbjct: 177 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 236

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G+  E     D+M       NVVTYN L+ GLCK  +++ A  +++ M   G++P+VI
Sbjct: 237 KCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 294

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY+ L+D FC A   D+A  L + + S G +P+VVT+N +I    K+  S  A  +  ++
Sbjct: 295 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             R + P +VT+ ILI    ++ + E+A  ++  M      PDV T+G LI GLC  G +
Sbjct: 355 YNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           + A  + + M    + PN V YN+++ G CK G        L EM   G VP   +Y S 
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  LC+  +  +A  L++++   G  P    YNIL
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 211/440 (47%), Gaps = 7/440 (1%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML--DSGVRPRSNTFNSLLIFVIK-S 154
           SS   V     Y  +I+   K    D+A     +M      V P   T+NS L  + K S
Sbjct: 143 SSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 202

Query: 155 CSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
            + +   L  S  +   +V  D  +F  LI G C+ G  ++A    + +   G+ PNVV 
Sbjct: 203 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVT 260

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y +L++G CK   +ERA  +   + + G+     TY+VL+    K     +  E    M 
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G +P++ T+N +I   C   +  E F++  ++ +R +  + VT+N LI G CK    +
Sbjct: 321 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFE 380

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  L ++M    + P+V+T+  LIDG C AG+ + A  + + + + G  P+VVTYNVL+
Sbjct: 381 QASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               K+G  +   + + EM   G  P  +TY  L+ +  R+   + A ++ S ++  G+ 
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD  TY +L+ GL   G  ++A  +   M     +P+   +     G  + GN    + L
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560

Query: 513 LGEMNEKGLVPNIASYSSTI 532
           L  +  KG++P+  + SS +
Sbjct: 561 LRVVLAKGMLPDATTCSSIL 580



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 38/322 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  ++DA  K+   D+AL   H M   G  P   TFNS++  + KS    + +    +  
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVY 355

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR  V  D  +F ILI G C+AG+  +A  +  ++      P+V+ + +LIDG CK G +
Sbjct: 356 NRMLVP-DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A+ +   +G L                                   GV P++ TYN L
Sbjct: 415 EAARDILDLMGNL-----------------------------------GVPPNVVTYNVL 439

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H  C  G++ E  +  +EM         +TY +L+  LC+  R  +A +L+ ++K  G 
Sbjct: 440 VHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGW 499

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TYN L+DG   +G+T++A  +  ++   G  P   T+        ++GN     +
Sbjct: 500 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559

Query: 407 LVREMEERGITPSEVTYTILID 428
           L+R +  +G+ P   T + ++D
Sbjct: 560 LLRVVLAKGMLPDATTCSSILD 581


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 169/587 (28%), Positives = 277/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 41  REGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFN-RA 99

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P + +  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 100 ASRAQGPRVL------------SPTSYT--YAILMDCCTRAHRPELALAFFGQLLRTGLR 145

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
             +   + LL    ++   D+    L           DV+S+ IL+K  C  G   +A +
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SP+VV Y ++IDG  K GD+ +A  LF+++ + G+     TY+ ++  
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M   GV P  +TYN LI+ Y + G+  E  ++F EMR + +  +
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VV  NTL+  LCK  +++EA  + D M M G +P+V +Y  +++G+   G       LF+
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P + T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G  PD Y Y  LI G C  G++ +A +L                 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P+ VVYNM++ GYC  G   +ALR+   M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN+  Y + +   C+ G+  E   L  +ML+ G+KPS  LYNI+
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 225/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F +M+  G+ P   T++S++  + K+ + DK   F  +  
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L D +++  LI G    G   +A  V  ++      P+VV   +L+   CK G I+
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +YT+++ G    G   D  + ++ M  +G++P + T+N LI
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G+ 
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   Y+ LI GFC  G   KA  L +++ +NG    +V +  +I    K G    A ++
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G+ P  V Y +L+D +     MEKA  ++  M  +G  P+V  YG L++G C 
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  M +  ++P+ ++YN++I G  + G +  A     EM E G+  N  +
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  +  L ++  + EA  L  ++  + +K  +   N +
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 234/496 (47%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++ A  K+R  D+A  +  QM++ GV P + T+N+L+     +  + +    F E R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-------- 219
            +  L DV +   L+   C+ G + +A +V + +   G +P+V  YT +++G        
Sbjct: 319 RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378

Query: 220 ------------------CCKN---------GDIERAKMLFRKIGELGLVATQHTYTVLI 252
                             C  N         G +++A ++F ++ + G+     TY  +I
Sbjct: 379 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV P  Y Y+CLI  +C  G + +  +L  E+ +  + 
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V + ++I  LCK  RV +A+ + D     G+ P+ + YN L+DG+C  G+ +KA R+
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM ++GI PS + Y I+ID    
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + +  TY +++ GL       EA  LF  +    ++ + + 
Sbjct: 619 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 678

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++  GLVP   +YS  I  L ++G   EAE + + M 
Sbjct: 679 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 738

Query: 553 KLGLKPSVSLYNILYR 568
             G +P   L N + R
Sbjct: 739 NAGCEPDSRLLNHVVR 754



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+  V ++  +I   C 
Sbjct: 384 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G  P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +  +I  L K G   D    ++     G+ P    YN L+  YC  GK+ +  ++FD M 
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  NVV Y TL+ G CK  R+ E   L  +M   GI P+ I YN +IDG  +AG T 
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G + +  TY++++R   K      A  L +E+    +    +T   +I
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 683

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               ++  +E+A ++++ + +SG  P   TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 684 AGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 743

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           P+  + N ++    K+    RA   L +++E+
Sbjct: 744 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 209/446 (46%), Gaps = 7/446 (1%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFP----SSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           + S  I  + +  +  L  +T LF         PV  +  +  +I A+    + D+A+  
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT--FNVLIKAYANCGMLDKAMII 418

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F++M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C 
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L KA E+++++   G   ++V + S+I+  CK G +  A+ +F     +GL      
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 538

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y +L+ G    G  +     ++ M   G+ P++  Y  L++ YC  G++ EG  LF EM 
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  + + YN +I GL +  R   A+    +M  +GI+ N  TY+ ++ G       D
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF +L++      ++T N +I    +    + A DL   +   G+ P  VTY+I+I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            + ++   +E+A +M+S MQ +G  PD      ++  L  K  +  A    + + E    
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLL 513
              +   +++  +  +G     +R L
Sbjct: 779 LEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ YTY  L+ + C      E     F ++    +  + +  + L+ G C+  R  EA
Sbjct: 109 LSPTSYTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +YN L+   C+ G++ +A  L   +   G   SP VV YN +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY+ ++ +  ++  M+KA      M   G 
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD +TY  LI+G    G  KEA ++F  M    + P+ V  N ++   CK G    A  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P +  +N+L +A  
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407

Query: 572 N 572
           N
Sbjct: 408 N 408


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 223/410 (54%), Gaps = 4/410 (0%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           RP +++ N+LL  ++ +   D     F S  R +V  D+Y+F  +I G C  G L KA +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNG---DIERAKMLFRKIGELGLVATQHTYTVLIC 253
           V   ++  G +P+V  Y SLIDG CK G   ++    ML +++ E G+  T  T+ VLI 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  KN         +E+M+  G++ S+ TYN LI   C+EGKV EG KL +EM    ++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N +T+  ++ G CK+  + +A   +D M    + P+V+ YN LID +   G+ + A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G SP+V TYN LI  FS++G+ + AS L+ EM+E+GI    VTY +LI +    
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++ KA ++   M + G  P+  TY  +I G C KGN+K A ++   M + +   N V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           N+ I  +C+ G    A  LL EM +K LVPN  +Y +    + + G  P+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 209/410 (50%), Gaps = 3/410 (0%)

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            +L   E+  +      S   L+ G   A  ++ A +          SP++  + ++I G
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISG 200

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE---FYEKMQLNGV 276
            C+ G + +A  + + I   GL  +  TY  LI G  K G   + +      ++M   G+
Sbjct: 201 LCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGI 260

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+  T+  LI+ YC     +   ++F+EM+ + +A +VVTYN+LI GLC E +V+E  +
Sbjct: 261 SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVK 320

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+++M+  G+SPN IT+  ++ GFC  G    A    + +      P VV YN+LI  + 
Sbjct: 321 LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYR 380

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G  + A  +   M ++GI+P+  TY  LI  F RS D   A  +   M++ G   DV 
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV 440

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY VLI  LC KG +++A KL + M E  LEPN + YN +I G+C +GN   A  +   M
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +     N+ +Y+  I   CQ GK  EA  LLN+ML   L P+   Y  +
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 185/364 (50%), Gaps = 3/364 (0%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+     +L+ G      ++ A+  FR      +    +T+  +I GL + G  +   + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEMRHREVACNVVTYNTLICG 324
            + ++  G++PS+ TYN LI  YC +G     +    L  EM    ++   VT+  LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            CK      A R+ ++MK  GI+ +V+TYN LI G C  G+ ++  +L  +++  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +T+  +++ F K G    A+D +  M ER + P  V Y ILID + R   ME A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M K G SP+V TY  LI G    G+ + AS L + M E  +E + V YN++I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              +A++LL EM+E GL PN  +Y++ I   C  G    A  +  +M K   + +V  YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 565 ILYR 568
           +  +
Sbjct: 514 VFIK 517



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS  + N L+       +V    K F     R V+ ++ T+NT+I GLC+  ++++A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRA 394
              +K  G++P+V TYN LIDG+C  G     +    L  ++   G SP+ VT+ VLI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K  N+  A  +  EM+++GI  S VTY  LI        +E+  ++   M+  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T+G ++ G C KG M +A+   + M E  +EP+ V+YN++I  Y + G    A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M +KG+ PN+ +Y+  I    + G W  A  LL++M + G++  V  YN+L  A
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 160/503 (31%), Positives = 249/503 (49%), Gaps = 39/503 (7%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S+ P    R+  S+ DA L       A F +      G    + ++NSLL  +++    
Sbjct: 39  ASTTPRIVGRVVNSLKDAKLA-----LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKH 93

Query: 158 -DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS--------- 207
            + G LF SE     E DV S+ I+I G C AGDL+ A E+L +++  GF+         
Sbjct: 94  REAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPI 153

Query: 208 -----------------------PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                                  PNVV YT+LI    +   +E A  L  ++ E G    
Sbjct: 154 ITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPN 213

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY VL+  L K  +     +  +KM   G +P++ T+N L+  +C  G V +  KL  
Sbjct: 214 LVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG 273

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M  + +  NVVTY+ LI GLCK  +  EA+ +L++MK  G++P+  TY+ LI G C A 
Sbjct: 274 IMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKAD 333

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + ++A ++  ++  +G +P VV Y+ +I AF K+G    A   ++EM ++  +P  VTY 
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSG-FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            +ID   +   + +A  +   MQ+SG   PDV TY  +I+GLC    + EA KL + M +
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
               P+ V Y  +I G CK G    A  LL  M   G  PN+ +Y++ I  LC+  K  E
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           AE ++ +M   G  P++  YN +
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTM 536



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 226/448 (50%), Gaps = 5/448 (1%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL    +M  +G  P + T   ++  +  +   D          C  + +V ++  LI  
Sbjct: 131 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC--DPNVVTYTALIAA 188

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
              A  L +A ++L ++ E G  PN+V Y  L+D  CK   +  A+ + +K+ E G    
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             T+  L+ G  K G   D  +    M   G+ P++ TY+ LI   C   K  E  ++ +
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM+ R V  +  TY+ LI GLCK  +++EAE++L +M  +G +P+V+ Y+ +I  FC +G
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTY 423
           +  +A +   +++   +SP VVTYN +I    K G    A  ++ +M+E G + P  VTY
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + +I+   +SD + +A ++   M K+G +PDV TY  +I GLC  G ++EA  L   M  
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
               PN V Y  +I G CK      A R++ EM   G  PN+ +Y++ +  LC  G+  E
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 548

Query: 544 AEVLLNQML--KLGLKPSVSLYNILYRA 569
           A+ L+ +M   +    P  + Y  +  A
Sbjct: 549 AQQLVQRMKDGRAECSPDAATYRTIVNA 576



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 260/539 (48%), Gaps = 19/539 (3%)

Query: 28  AFSLFNWA--SRQGLQHTPQSISIILRLLLSKMSSHSHAAA--QTLIL-----KIISGRI 78
           A + F WA  S  G  HT  S + +L++L+ +   H  A    ++ +L      + S  I
Sbjct: 59  ALAFFRWAPASIPGFSHTAFSWNSLLQVLV-RCKKHREAGDLFRSELLASCEPDVCSYNI 117

Query: 79  TSSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
             S F     L    +L     S+     +  +  II A   +   D A+ +   M   G
Sbjct: 118 VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---G 174

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAF 195
             P   T+ +L+    ++   ++      E R +    ++ ++ +L+   C+   +  A 
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 234

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           +V+ ++ E GF+PNV+ + SL+DG CK G+++ A+ L   +   G+     TY+ LI GL
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K+    +  E  E+M+  GV+P  +TY+ LIH  C   K+ E  ++   M       +V
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 354

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           V Y+++I   CK  ++ EA++ L +M+    SP+V+TYN +IDG C  G+  +A  +  Q
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQ 414

Query: 376 LKSNGQS-PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ +G   P VVTY+ +I    K+     A  L+  M + G  P  VTYT +ID   +  
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +E+A  +   M+++G +P+V TY  LI GLC    + EA ++   M      PN V YN
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534

Query: 495 MMIFGYCKEGNSYRALRLLGEMNE--KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            M+ G C  G    A +L+  M +      P+ A+Y + +  L       EAE LL QM
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 144/278 (51%), Gaps = 4/278 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K+   ++A     +M  SG  P    ++S++    KS    +      E R
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDI 226
             +   DV ++  +I G C+ G + +A  +L Q++E G   P+VV Y+++I+G CK+  +
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ L  ++ + G      TYT +I GL K G  ++     + M+  G +P++ TY  L
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK--MA 344
           I   C   KV E  ++ +EMR+     N+VTYNT++ GLC   R++EA++L+ +MK   A
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRA 561

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
             SP+  TY  +++    +    +A +L  Q+KS   S
Sbjct: 562 ECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSS 599



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 121/239 (50%), Gaps = 4/239 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y SII A  KS    +A     +M      P   T+N+++  + K     +  +   + 
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                V  DV ++  +I G C++  L +A ++L+++ + G +P+VV YT++IDG CK G 
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A+ L + +   G      TYT LI GL K     +     E+M+  G  P+L TYN 
Sbjct: 476 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           +++  C  G++ E  +L   M+     C  +  TY T++  L     VQEAE+LL+QMK
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 223/410 (54%), Gaps = 4/410 (0%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           RP +++ N+LL  ++ +   D     F S  R +V  D+Y+F  +I G C  G L KA +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNG---DIERAKMLFRKIGELGLVATQHTYTVLIC 253
           V   ++  G +P+V  Y SLIDG CK G   ++    ML +++ E G+  T  T+ VLI 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  KN         +E+M+  G++ S+ TYN LI   C+EGKV EG KL +EM    ++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N +T+  ++ G CK+  + +A   +D M    + P+V+ YN LID +   G+ + A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G SP+V TYN LI  FS++G+ + AS L+ EM+E+GI    VTY +LI +    
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++ KA ++   M + G  P+  TY  +I G C KGN+K A ++   M + +   N V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           N+ I  +C+ G    A  LL EM +K LVPN  +Y +    + + G  P+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 209/410 (50%), Gaps = 3/410 (0%)

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            +L   E+  +      S   L+ G   A  ++ A +          SP++  + ++I G
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISG 200

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE---FYEKMQLNGV 276
            C+ G + +A  + + I   GL  +  TY  LI G  K G   + +      ++M   G+
Sbjct: 201 LCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGI 260

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+  T+  LI+ YC     +   ++F+EM+ + +A +VVTYN+LI GLC E +V+E  +
Sbjct: 261 SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVK 320

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+++M+  G+SPN IT+  ++ GFC  G    A    + +      P VV YN+LI  + 
Sbjct: 321 LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYR 380

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G  + A  +   M ++GI+P+  TY  LI  F RS D   A  +   M++ G   DV 
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV 440

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY VLI  LC KG +++A KL + M E  LEPN + YN +I G+C +GN   A  +   M
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +     N+ +Y+  I   CQ GK  EA  LLN+ML   L P+   Y  +
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 185/364 (50%), Gaps = 3/364 (0%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+     +L+ G      ++ A+  FR      +    +T+  +I GL + G  +   + 
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEMRHREVACNVVTYNTLICG 324
            + ++  G++PS+ TYN LI  YC +G     +    L  EM    ++   VT+  LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            CK      A R+ ++MK  GI+ +V+TYN LI G C  G+ ++  +L  +++  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +T+  +++ F K G    A+D +  M ER + P  V Y ILID + R   ME A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M K G SP+V TY  LI G    G+ + AS L + M E  +E + V YN++I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              +A++LL EM+E GL PN  +Y++ I   C  G    A  +  +M K   + +V  YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 565 ILYR 568
           +  +
Sbjct: 514 VFIK 517



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS  + N L+       +V    K F     R V+ ++ T+NT+I GLC+  ++++A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRA 394
              +K  G++P+V TYN LIDG+C  G     +    L  ++   G SP+ VT+ VLI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K  N+  A  +  EM+++GI  S VTY  LI        +E+  ++   M+  G SP+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T+G ++ G C KG M +A+   + M E  +EP+ V+YN++I  Y + G    A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M +KG+ PN+ +Y+  I    + G W  A  LL++M + G++  V  YN+L  A
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 222/421 (52%), Gaps = 4/421 (0%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N+ L  ++++   ++G+ F  +  C+ ++ D+ +   LI+G C+ G   KA  V+  LE+
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+V+ Y  LI G CK G+I  A  L  ++     V T +T    +C    +G  K+
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLC---DSGKLKE 230

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E  ++       P + TY  LI   C E  V +  KL DEMR +    +VVTYN LI 
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G+CKE R+ EA R L+ M   G  PNVIT+N ++   C  G    A +   ++   G SP
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           SVVT+N+LI    + G    A D++ +M + G TP+ ++Y  L+ +  +   ME+A E  
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            +M   G  PD+ TY  L+  LC  G +  A ++ N +      P  + YN +I G  K 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G +  A++LL EM  KGL P+I +YS+ +G L ++GK  EA    + + ++G+KP+   Y
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530

Query: 564 N 564
           N
Sbjct: 531 N 531



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 227/463 (49%), Gaps = 2/463 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    K+  + +A      + DSG  P   T+N L+    K+            +R  
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLL--DRMS 207

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV ++  +++  C++G L +A EVL++  +    P+V+ YT LI+  CK   + +A 
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY VLI G+ K G   +   F   M   G  P++ T+N ++   
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+  +  K   EM  +  + +VVT+N LI  LC++  +  A  +L++M   G +PN 
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+   C   + ++A    + + S G  P +VTYN L+ A  K G   +A +++ +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G +P  +TY  +ID   +    + A ++   M+  G  PD+ TY  L+ GL  +G 
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA   F+ + E  ++PN + YN ++ G CK   + RA+  L  M  +G  P   SY  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            I  L  +G   EA  LLN++   G+    S   ++ +   N+
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIPFNV 610



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 34/373 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+A  K     QA+    +M D G +P   T+N                       
Sbjct: 250 YTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN----------------------- 286

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      +LI G C+ G L++A   LN +   G  PNV+ +  ++   C  G    
Sbjct: 287 -----------VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD 335

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+    ++   G   +  T+ +LI  L + GL     +  EKM  +G +P+  +YN L+H
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C + K+    +  D M  R    ++VTYNTL+  LCK+ +V  A  +L+Q+   G SP
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +ITYN +IDG    G+TD A +L +++K  G  P ++TY+ L+   S+ G    A    
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            ++EE G+ P+ +TY  ++    ++    +A +  + M   G  P   +Y +LI GL  +
Sbjct: 516 HDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYE 575

Query: 469 GNMKEASKLFNSM 481
           G  KEA +L N +
Sbjct: 576 GLAKEALELLNEL 588



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 3/315 (0%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L +NG  ++GF+F E M   G  P +     LI   C  GK  +  ++ + +       +
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN LI G CK   +  A +LLD+M    +SP+V+TYN ++   CD+G+  +A  + +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +       P V+TY +LI A  K      A  L+ EM ++G  P  VTY +LI+   +  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A    + M   G  P+V T+ +++  +C  G   +A K    M      P+ V +N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I   C++G   RA+ +L +M + G  PN  SY+  +  LC+D K   A   L+ M+  
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 555 GLKPSVSLYNILYRA 569
           G  P +  YN L  A
Sbjct: 417 GCYPDIVTYNTLLTA 431



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y +++    +    D+A+ +FH + + GV+P + T+NS+++ + K+    +   F +   
Sbjct: 495 YSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMV 554

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
              CK      S+ ILI+G    G   +A E+LN+L   G
Sbjct: 555 ARGCKPT--ETSYMILIEGLAYEGLAKEALELLNELCSRG 592


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 217/399 (54%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D  +F  LI G C  G + +A E+ N++ + G  PNV+ YT++I+G CK G+   A 
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV 218

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F+K+ + G      TY+ +I  L K+ L  D  EF  +M   G+ P+++TYN ++H +
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           CN G+++E  +LF EM  R+V  N VT+  L+ GLCKE  V EA  + + M   G+ P++
Sbjct: 279 CNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDI 338

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN L+DG+C     ++A ++F  +   G +P   +YN+LI  + K+     A  L+ E
Sbjct: 339 STYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAE 398

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  + + P  VTY+ L+    +    ++A  ++  M   G  P++ TY +L+ G C  G+
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA KL  SM E KLEPN V Y ++I G    G    A  L  ++   G  P+I +Y+ 
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTV 518

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  L ++G   EA  L  +M   G  P+   YN++ + 
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 557



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 220/448 (49%), Gaps = 1/448 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++M+    RP    F   L    K   +       ++ +  +V  +VYS  IL
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ +  VL ++ ++G  P+ + + +LI+G C  G I+ A  LF ++ + G 
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +YT +I GL K G      + ++KM+ NG  P++ TY+ +I   C +  V++  +
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
              EM  R +  NV TYN+++ G C   ++ EA RL  +M    + PN +T+  L+DG C
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  +F  +   G  P + TYN L+  +        A  +   M  +G  P   
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y ILI+ + +S  M++A  + + M     +PD  TY  L+ GLC  G  KEA  LF  M
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 PN V Y +++ G+CK G+   AL+LL  M EK L PNI  Y+  I  +   GK 
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             A+ L +++   G +P +  Y ++ + 
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKG 522



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGI 180
           +A+  F++M+  G  P   ++ +++  + K+ +       F    +N CK   +V ++  
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKP--NVVTYST 238

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+   +N A E L+++ E G  PNV  Y S++ G C  G +  A  LF+++    
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++    T+T+L+ GL K G+  +    +E M   GV P + TYN L+  YC +  ++E  
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F+ M  +  A    +YN LI G CK  R+ EA+ LL +M    ++P+ +TY+ L+ G 
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G   +A  LF ++ S G  P++VTY +L+  F K G+   A  L++ M+E+ + P+ 
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V YTILI+    +  +E A E++S +   G  PD+ TY V+I GL  +G   EA  LF  
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           M +    PN   YN+MI G+ +  +S  A+RL+ EM  K    N++++   + +  QD
Sbjct: 539 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 4/211 (1%)

Query: 358 DGFCDAGE----TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           DGF          D A   F ++      PSVV +   + +F+K         L  +M+ 
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             +T +  +  ILI+   R + ++ +  +   M K G  PD  T+  LI+GLC +G +KE
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +LFN M +   EPN + Y  +I G CK GN+  A+ +  +M + G  PN+ +YS+ I 
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            LC+D    +A   L++M++ G+ P+V  YN
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYN 272


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 228/459 (49%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A   F  M      P   T+N+LL  + ++   ++    F E  
Sbjct: 13  YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 72

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            +   DV SF IL+ G C AG +  A E   ++++   SPNV+ Y+ LIDG CK   + +
Sbjct: 73  DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQ 131

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L   +   G      TYT+L+ GL K       +E   +M   G  P+L TYN L+H
Sbjct: 132 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 191

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C   +VS+   L  +M  R    NVVTY TLI GLCK  RV++A  +L  M   G +P
Sbjct: 192 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 251

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +++ YN LI+G C A + D++  L  +  S G  P VVTY+ +I    ++     A  L+
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             ++ RG  P  + Y+ LID   ++  +++AF++Y +M   G   DV TY  LI GLC  
Sbjct: 312 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  L   M      P+ + YN +I G C   +   A+ L+ EM      P+  +Y
Sbjct: 372 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 431

Query: 529 SSTIGVLCQDGKWPEAEV-LLNQMLKLGLKPSVSLYNIL 566
           +  I  +C+  +   A +    +M+  G+ P    Y+IL
Sbjct: 432 NILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 145/445 (32%), Positives = 213/445 (47%), Gaps = 5/445 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELD--VYSFGILIKGCCEAG 189
           M D G  P   T+NSL+  + K+   D+    F E+   VE    + ++  L+ G    G
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELF-EHMKSVECSPSMVTYNTLLDGLFRTG 59

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L +A  +  ++ +   S +V+ +  L+ G C+ G IE A   FRK+ +        TY+
Sbjct: 60  KLERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYS 117

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           VLI GL K        E  E M+  G SP + TY  L+   C E KV+  +++  EM   
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               N+VTYN+L+ GLC+  RV +A  L+  M   G +PNV+TY  LIDG C  G    A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             +   +   G +P ++ YN+LI    KA     +  L+R     GI P  VTY+ +I  
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             RS+ +++A  +   ++  G  PDV  Y  LI GLC  G + EA  L+  M     + +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y+ +I G CK G    A  LL  M   G  P+  +Y+S I  LC      EA  L+ 
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 550 QMLKLGLKPSVSLYNILYRAKNNIE 574
           +M +    PS   YNIL      +E
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRME 442



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 168/332 (50%), Gaps = 2/332 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++D   K      A     +MLD+G  P   T+NSLL  + ++           +  
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 210

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C+    +V ++G LI G C+ G +  A  +L  + + G +P+++IY  LI+G CK   ++
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  L R+    G+     TY+ +I GL ++    +       ++  G  P +  Y+ LI
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GKV E F L++ M       +VVTY+TLI GLCK  RV EA  LL +M   G  
Sbjct: 331 DGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 390

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS-D 406
           P+ +TYN LI G CD    D+A  L  +++ +  +PS VTYN+LI    +      A+ D
Sbjct: 391 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALD 450

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
             +EM + G+ P  +TY+IL++   +S D+ +
Sbjct: 451 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 482



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 200/444 (45%), Gaps = 78/444 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN---TFNSLLIFVIKSCSFDKGWLFFS 165
           Y +++D   ++   ++A+  F +MLD     RS+   +FN L+  + ++   +    FF 
Sbjct: 48  YNTLLDGLFRTGKLERAMALFQEMLDR----RSHDVISFNILVTGLCRAGKIETALEFFR 103

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +   +   +V ++ +LI G C+A  +++A E+L  ++  G SP+V+ YT L+DG CK   
Sbjct: 104 KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  + R++ + G V    TY  L+ GL +     D       M   G +P++ TY  
Sbjct: 164 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHRE----------------------------------- 310
           LI   C  G+V +   +  +M  +                                    
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +VVTY+++I GLC+  R+ EA RLL  +K  G  P+VI Y+ LIDG C AG+ D+AF
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------SKM------------------- 403
            L+  +  +G    VVTY+ LI    KAG         ++M                   
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 404 --------ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA-FEMYSLMQKSGFSPD 454
                   A +LV EME     PS VTY ILI    R + ++ A  + +  M  +G  PD
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 455 VYTYGVLIHGLCMKGNMKEASKLF 478
             TY +L+ GL    ++ E   L 
Sbjct: 464 HITYSILLEGLKKSKDLHELRHLV 487



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 7/243 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           +Y  +I+   K+   D+++    + +  G++P   T++S++  + +S   D+     L+ 
Sbjct: 255 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 314

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
               C  ++ +YS   LI G C+AG +++AF++   +   G   +VV Y++LIDG CK G
Sbjct: 315 KSRGCPPDVILYS--TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAG 372

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A +L  ++  +G   +  TY  LI GL       +  E  E+M+ +  +PS  TYN
Sbjct: 373 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 432

Query: 285 CLIHEYCNEGKV-SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL-LDQMK 342
            LIH  C   +V S     F EM    V  + +TY+ L+ GL K   + E   L LDQM 
Sbjct: 433 ILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMV 492

Query: 343 MAG 345
             G
Sbjct: 493 QLG 495


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/431 (33%), Positives = 223/431 (51%), Gaps = 1/431 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +++  G++P   TF +L+  + K   F +    F +   K  + DVY++  +I G C+ G
Sbjct: 153 KVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG 212

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A  +L ++EE G  PN+V Y++LID  C++  +  A  +F  +   G+     TYT
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYT 272

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GL K    K+      +M    + P + T+N L+  +C EGKVSE   +   M   
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM 332

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  NVVTY++L+ G      V EA +L   M   G  PN+ +YN LI+G+C A   D+A
Sbjct: 333 GVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEA 392

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +LFN++   G +P+ V+YN LI  F + G  + A DL R M   G  P   TY+IL+D 
Sbjct: 393 MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +   + KAF ++  MQ +   P++  Y +L+H +C  GN K+A KLF+ ++   L+P+
Sbjct: 453 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPH 512

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
             +Y  +I G CKEG    AL     M   G  P+  SY+  I  L Q      A +L+ 
Sbjct: 513 VQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVG 572

Query: 550 QMLKLGLKPSV 560
           +M   G    V
Sbjct: 573 EMRDRGFIADV 583



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 214/395 (54%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + +F  LI G C+ G+  +A E+ + +   G  P+V  Y ++I+G CK G+   A  L +
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E G      TY+ LI  L ++ L  +  + +  M+  G+SP ++TY  LI   C   
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +  E   L +EM    +  ++VT+N L+   CKE +V EA  +L  M   G+ PNV+TY+
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS 342

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ G+    +  +A +LF+ + + G  P++ +YN+LI  + KA     A  L  EM  +
Sbjct: 343 SLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ 402

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+TP+ V+Y  LI  F +   + +A +++  M  +G  PD++TY +L+ G C +G + +A
Sbjct: 403 GLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKA 462

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF +M  T L+PN V+Y +++   CK GN   A +L  E+  +GL P++  Y++ I  
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC++G   EA      M   G  P    YN++ R 
Sbjct: 523 LCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 237/460 (51%), Gaps = 2/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y+   DA    R  D AL  F+ ML     P    F  LL  ++K   +    +  S+  
Sbjct: 60  YQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQM 119

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             V L  ++Y+  I +   C+   ++  F VL ++ ++G  P +V +T+LI+G CK G+ 
Sbjct: 120 ELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEF 179

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  LF  +   G     +TY  +I GL K G         +KM+  G  P++ TY+ L
Sbjct: 180 AQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL 239

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C +  V+E   +F  M+ + ++ ++ TY +LI GLCK  R +EA  LL++M    I
Sbjct: 240 IDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI 299

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+++T+N L+D FC  G+  +A  +   +   G  P+VVTY+ L+  +S   +   A  
Sbjct: 300 MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARK 359

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M  +G  P+  +Y ILI+ + ++  +++A ++++ M   G +P+  +Y  LIHG C
Sbjct: 360 LFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFC 419

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++EA  LF +M      P+   Y++++ G+CK+G   +A RL   M    L PN+ 
Sbjct: 420 QLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 479

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            Y+  +  +C+ G   +A  L +++   GL+P V LY  +
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 194/370 (52%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           Q+E +G SPN+   +  ++  C+   ++    +  K+ +LGL  T  T+T LI GL K G
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E ++ M   G  P +YTYN +I+  C  G+ +    L  +M       N+VTY+
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI  LC++  V EA  +   MK  GISP++ TY  LI G C      +A  L N++ S 
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P +VT+NVL+  F K G    A  +++ M E G+ P+ VTY+ L+  +    D+ +A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +++ +M   G  P++++Y +LI+G C    + EA +LFN M    L PN+V YN +I G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +C+ G    A  L   M   G +P++ +YS  +   C+ G   +A  L   M    LKP+
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 560 VSLYNILYRA 569
           + +Y IL  A
Sbjct: 478 LVMYTILVHA 487


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 253/497 (50%), Gaps = 35/497 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I A+      ++A      M  SGV P    +N+++  + K+   ++   +  E 
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + ++ D  +FG  I G  + G + +A +  +++ + G  PN  +YT LI+G  K G++
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +FR++  LG++    T +  I GL KNG  ++  + + +++  G+ P ++TY+ L
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C +G+V + F+L DEM  + +A N+  YN L+ GLCK   +Q A +L D M   G+
Sbjct: 655 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY+ +IDG+C +    +AF LF+++ S G  P    YN L+    K G+ + A +
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 407 LVREMEERG----------------------------------ITPSEVTYTILIDSFVR 432
           L REM ++G                                  I P  VTYT +ID   +
Sbjct: 775 LFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ME+A  ++  MQ+     D  TY  L++G    G   E   LF  M    ++P++V 
Sbjct: 835 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 894

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y ++I+ +CKE N   A +L  E+  KG++     +   I  LC+     EA  LL++M 
Sbjct: 895 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 954

Query: 553 KLGLKPSVSLYNILYRA 569
           +LGLKPS++  N L R+
Sbjct: 955 ELGLKPSLAACNTLVRS 971



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 251/479 (52%), Gaps = 11/479 (2%)

Query: 75   SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
            +G++T ++     +L H   L P+  NP     LY  +I+ H K+    +AL  F ++  
Sbjct: 556  TGKMTEAAKYFDEMLDH--GLMPN--NP-----LYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 135  SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
             GV P   T ++ +  ++K+    +    FSE + K +  DV+++  LI G C+ G++ K
Sbjct: 607  LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 194  AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            AFE+ +++   G +PN+ IY +L+DG CK+GDI+RA+ LF  + E GL     TY+ +I 
Sbjct: 667  AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726

Query: 254  GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            G  K+    + F  + +M   GV P  + YN L+H  C EG + +   LF EM  +  A 
Sbjct: 727  GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA- 785

Query: 314  NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
              +++NTLI G CK  ++QEA +L  +M    I P+ +TY  +ID  C AG+ ++A  LF
Sbjct: 786  TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 845

Query: 374  NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +++        VTY  L+  ++K G S     L  +M  +G+ P EVTY ++I +  + 
Sbjct: 846  KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 905

Query: 434  DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D++ +AF++   +   G       + +LI  LC + ++ EASKL + M E  L+P+    
Sbjct: 906  DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 965

Query: 494  NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N ++  + + G    A R+   +   GLVP+  +    +     D    +A  L+ Q++
Sbjct: 966  NTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 278/613 (45%), Gaps = 80/613 (13%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P +    F W+  Q     PQ +     L +   +S     A  ++ ++I    +SSS  
Sbjct: 86  PKRLLDFFYWSQSQ--MGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSIL 143

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              L           S+PV    +++ +ID++ +  + D+A   F    +  +       
Sbjct: 144 DSVLFWFRNY---GGSSPV----VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC 196

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           NSLL  ++K    +  W  ++     K+  DVY++  L+   C+ GDL  A  VL +++E
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G +PN  IY+ +I+G C+ GDI+ A  L R +GE GLV   +TYT++  GL +     +
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
               +E+MQ  G+ P     + LI  +  EG + E  ++ D M    +  N++TYN LI 
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  ++++A  +L  M   G  PN  T+  LI+G+C      +A  L ++++     P
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S V+Y  +I       +  +A+ L+ +M   G+ P+ V Y+ILI ++     +E+A  + 
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 444 SLMQKSGFSPDVY-----------------------------------TYGVLIHGLCMK 468
             M  SG +PD++                                   T+G  I G    
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN----------------------- 505
           G M EA+K F+ M +  L PN+ +Y ++I G+ K GN                       
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 506 ------------SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
                          AL++  E+ EKGLVP++ +YSS I   C+ G+  +A  L ++M  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 554 LGLKPSVSLYNIL 566
            G+ P++ +YN L
Sbjct: 677 KGIAPNIFIYNAL 689



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 247/493 (50%), Gaps = 37/493 (7%)

Query: 111 SIIDAHL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-R 168
           +II A L +++  ++A   F +M  +G++P  N  ++L+   ++    D+          
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 361

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C + +++ ++ +LI G C+ G + KA E+L  +  +G  PN   +  LI+G C+  ++ R
Sbjct: 362 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGR 421

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  ++ +  LV +  +Y  +I GL          +  EKM  +G+ P++  Y+ LI 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y +EG++ E  +L D M    VA ++  YN +I  L K  +++EA   L +++  G+ P
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +T+   I G+   G+  +A + F+++  +G  P+   Y VLI    KAGN   A  + 
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 409 R-----------------------------------EMEERGITPSEVTYTILIDSFVRS 433
           R                                   E++E+G+ P   TY+ LI  F + 
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++EKAFE++  M   G +P+++ Y  L+ GLC  G+++ A KLF+ M E  LEP+ V Y
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + MI GYCK  N   A  L  EM  KG+ P+   Y++ +   C++G   +A  L  +ML+
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 554 LGLKPSVSLYNIL 566
            G   ++S   ++
Sbjct: 782 KGFATTLSFNTLI 794



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 229/460 (49%), Gaps = 1/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y  +I+   +    D+A+     M + G+ P + T+  +   + ++   ++  L F E 
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  ++ D  +   LI G    GD+++   + + +   G   N++ Y  LI G CK G +
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  + + +  LG      T+ +LI G  +        E  ++M+   + PS  +Y  +
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C+   +S   KL ++M    +  NVV Y+ LI     E R++EA RLLD M  +G+
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++  YN +I     AG+ ++A     +++  G  P  VT+   I  +SK G    A+ 
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              EM + G+ P+   YT+LI+   ++ ++ +A  ++  +   G  PDV T    IHGL 
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++EA K+F+ + E  L P+   Y+ +I G+CK+G   +A  L  EM  KG+ PNI 
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            Y++ +  LC+ G    A  L + M + GL+P    Y+ +
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 724



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 239/490 (48%), Gaps = 39/490 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +II    K+   ++A  Y  ++   G++P + TF + ++   K+    +   +F E  
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +       +Y+  +LI G  +AG+L +A  +  +L  +G  P+V   ++ I G  KNG 
Sbjct: 571 DHGLMPNNPLYT--VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +F ++ E GLV    TY+ LI G  K G  +  FE +++M L G++P+++ YN 
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C  G +    KLFD M  + +  + VTY+T+I G CK   V EA  L  +M   G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748

Query: 346 ISPN----------------------------------VITYNKLIDGFCDAGETDKAFR 371
           + P+                                   +++N LIDG+C + +  +A +
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 808

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF ++ +    P  VTY  +I    KAG  + A+ L +EM+ER +    VTYT L+  + 
Sbjct: 809 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 868

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +     + F ++  M   G  PD  TYG++I+  C + N+ EA KL + +    +     
Sbjct: 869 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 928

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +++++I   CK  +   A +LL EM E GL P++A+ ++ +    + GK  EA  +   +
Sbjct: 929 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGV 988

Query: 552 LKLGLKPSVS 561
             LGL P  +
Sbjct: 989 KSLGLVPDTT 998



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 202/417 (48%), Gaps = 21/417 (5%)

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           + ++S+++  V   + SF IL    C +     A  VL Q+    +S + ++ + L    
Sbjct: 92  FFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLF--- 148

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
                       FR  G     ++   + +LI    + G+  +    +   + + +  SL
Sbjct: 149 -----------WFRNYGG----SSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISL 193

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
              N L+ +    G +   +K+++ M   ++  +V TY  L+  LCK   ++ A+R+L +
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G++PN   Y+ +I+G C  G+ D+A  L   +   G  P+  TY ++     +A  
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A     EM++ G+ P     + LID F+R  D+++   +  +M   G   ++ TY V
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LIHGLC  G M++A+++   M     +PN   + ++I GYC+E N  RAL LL EM ++ 
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           LVP+  SY + I  LC       A  LL +M   GLKP+V +Y+IL   Y ++  IE
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/490 (31%), Positives = 240/490 (48%), Gaps = 38/490 (7%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVY 176
           K  + D A   + +ML+SG+RP   TFN+++  + K     +  L  S   R     + +
Sbjct: 179 KFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAF 238

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI G C   +L+ AF + +++ + G  PN V Y++LI+G C  G +E A  +  ++
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298

Query: 237 GELGLVATQHTYTV-----------------------------------LICGLFKNGLQ 261
            + G+  T +TYT+                                   LI GL ++G  
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +     Y KM  +G+ P+  TYN LI++ C EG+    F +F  M       +  TYN +
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   C    +Q+A  + D+M  AG SPNVITYN LI G+C  G  + A RL   +K NG 
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P   TY  LI  FS+ G  + A+ L   M E GI+P+ VTYT +ID +     ++ A  
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M +SG  P   TY V+I G     ++ EA      M +  L PN + Y   I G C
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV--LLNQMLKLGLKPS 559
           + G +  A ++  EM ++   PN+ +YSS I  LCQ+G+  +AE+  LL ++   G +P+
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658

Query: 560 VSLYNILYRA 569
           V  Y  L + 
Sbjct: 659 VDTYTTLVKG 668



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 154/461 (33%), Positives = 239/461 (51%), Gaps = 3/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  H ++   D A   F +M+  G  P S T+++L+  +      ++      E  
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +E  VY++ I +   C+AG  ++A E+L ++++ G  PN+  +T+LI G  ++G  E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L+ K+   GLV T  TY  LI  L   G  +  F  ++ M  +G  PS  TYN +I
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G + +   +FD+M     + NV+TYNTLI G CK+  +  A RLL+ MK  G+ 
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TY +LI GF   G+ + A  LF  +  +G SP+ VTY  +I  +        A  L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M E G  PS  TY ++I  F +++ + +A      M K G  P+V TY   I GLC 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA--LRLLGEMNEKGLVPNI 525
            G    A K+F+ M +    PN   Y+ +I+G C+EG +  A    LL  +   G  PN+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y++ +  LC +G+  EA+ L+  M K GL+PS  +Y  L
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 237/513 (46%), Gaps = 28/513 (5%)

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY----- 128
           IS  ++S  +   S LCHL+        P  K     +I+  H  +    +  F+     
Sbjct: 54  ISTILSSPKWEHSSELCHLS--------PKLKPHHVVNILQTHKNTDSVLRFFFWISRRK 105

Query: 129 --------FHQMLDSGVRPR-SNTFNSLLIFVIKSC----SFDKGWLFFSENRCKVEL-- 173
                   F  ML+  VR R     + + I +IKSC       +   F SE   K +   
Sbjct: 106 FFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY 165

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            + SF  L+    +   ++ A ++  ++   G  P+++ + ++I+  CK G ++ AK++ 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             I          TYT LI G  +N      F  +++M  +G  P+  TY+ LI+  C+E
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E   + +EM  + +   V TY   +  LC      EA  LL +MK  G  PN+ T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G    G+ + A  L++++ ++G  P+ VTYN LI      G  + A  + + M  
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  PS  TY  +I  F    D++KA  ++  M K+G SP+V TY  LI+G C +GN+  
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M    L+P+   Y  +I G+ + G    A  L   M E G+ PN  +Y++ I 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                 K  +A  L  +M++ G  PS   YN++
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIK 183
           A+  +H+ML  G+ P + T+N+L+  +     F+  +  F        L    ++  +IK
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C  GD+ KA  + +++ + G SPNV+ Y +LI G CK G++  A  L   +   GL  
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP 480

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TYT LI G  + G  +     +  M  +G+SP+  TY  +I  Y N  KV +   LF
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            +M       +  TYN +I G  K   + EAE    +M   G+ PNVITY   IDG C  
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 364 GETDKAFRLFNQLKSN-------------------------------------GQSPSVV 386
           G T  AF++F++++                                       G  P+V 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  L++     G    A  LV  M+++G+ PSE  Y  L+    ++  +E A  ++  M
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              GF   +  Y  LI  LC +  ++EA  +F +M E     ++V + +++ G  KEG +
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGET 780

Query: 507 YRALRLLGEMNEKGLVPNIASY 528
              L+LL  M  +    N  +Y
Sbjct: 781 DLCLKLLHVMESRNCTLNFQTY 802



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 178/405 (43%), Gaps = 38/405 (9%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S   +  ++ Y  II          +A+  F +ML +G  P   T+N+L+    K  + +
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                    +   ++ D +++  LI G    G L  A  +   + E G SPN V YT++I
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL---------------------- 255
           DG      ++ A  LF K+ E G + +  TY V+I G                       
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 256 --------FKNGLQKDG-----FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV--SEGF 300
                   F +GL ++G     F+ + +M+     P+LYTY+ LI+  C EG+   +E +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L   + H     NV TY TL+ GLC E R  EA++L+  M+  G+ P+   Y  L+ G 
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C   + + A  +F  + + G    +  Y  LI A  K    + A  + + M E+     E
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           V +T+L+D  ++  + +   ++  +M+    + +  TY +L   L
Sbjct: 765 VAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 23/330 (6%)

Query: 81  SSFTPRSLLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           S F+    L H T LF        S N VT    Y +IID +      D AL  F +M++
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVT----YTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
           SG  P S T+N ++    K+ S  +     +EN C   +      +V ++   I G C  
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISE-----AENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM--LFRKIGELGLVATQH 246
           G    AF++ +++E+  + PN+  Y+SLI G C+ G  E A+M  L  ++   G      
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TYT L+ GL   G   +  +    MQ  G+ PS   Y  L+   C   KV     +F  M
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  ++  Y  LIC LCKE  ++EA+ +   M     + + + +  L+DG    GET
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGET 780

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           D   +L + ++S   + +  TY +L R  S
Sbjct: 781 DLCLKLLHVMESRNCTLNFQTYVMLARELS 810


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 216/399 (54%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ D  +F  LI G C  G++ +A  + N++   G  P+V+ Y+++I+G CK+G+   A 
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L RK+ E G       YT +I  L K+ L  D  +   +M   G+ P + TY+ ++H +
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G ++E   LF+EM  R V  N VT+  L+ GLCKE  V EA  + + M   G  PN 
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN L+DG+C   + D+A ++ + +   G +P V +YN+LI  + K      A  L+ E
Sbjct: 338 YTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+ +TP  VTY+ L+    +    ++A  ++  M  SG  PD+ TY  L+ GLC  G+
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA KL  SM E+K+EP+ V+YN++I G    G    A  L  ++   G+ P I +Y+ 
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  L ++G   EA  L  +M   G  P+   YN++ + 
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 223/450 (49%), Gaps = 36/450 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIK 183
           A+    +M   G++P + TFN+L+          +    F+E  R   + DV S+  +I 
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN-------------------- 223
           G C++G+ + A ++L ++EE G  PN+V YT++ID  CK+                    
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265

Query: 224 ---------------GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
                          G +  A +LF ++    ++    T+T+L+ GL K G+  +    +
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E M   G  P+ YTYN L+  YC   ++ E  K+ D M  +  A  V +YN LI G CK 
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ EA+ LL +M    ++P+ +TY+ L+ G C  G   +A  LF ++ S+G  P ++TY
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           + L+    K G+   A  L++ M+E  I P  V Y ILI+    +  +E A E++S +  
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P + TY ++I GL  +G   EA +LF  M +    PN   YN++I G+ +  +S  
Sbjct: 506 DGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSST 565

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           A+RL+ EM  K    + +++   + +  +D
Sbjct: 566 AIRLIDEMVGKRFSADSSTFQMLLDLESRD 595



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 214/445 (48%), Gaps = 36/445 (8%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++ML    RP    F   L  + K   +       ++ +   V  +VYS  IL
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    +  A  VL ++ ++G  P+ + + +LI+G C  G+I               
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEI--------------- 178

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                               K+    + +M   G  P + +Y+ +I+  C  G  S   +
Sbjct: 179 --------------------KEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQ 218

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  +M  +    N+V Y T+I  LCK+  V +A  LL +M   GI P+V+TY+ ++ GFC
Sbjct: 219 LLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFC 278

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G  ++A  LFN++      P+ VT+ +L+    K G    A  +   M ++G  P+  
Sbjct: 279 SLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAY 338

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  L+D +  ++ M++A ++  +M   G +P V++Y +LI+G C +  + EA  L   M
Sbjct: 339 TYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            E +L P+ V Y+ ++ G C+ G    AL L  EM   GL+P++ +YS+ +  LC+ G  
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            EA  LL  M +  ++P + LYNIL
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNIL 483



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 34/389 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID+  K  L + A+    +M+D G+ P                             
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP----------------------------- 265

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DV ++  ++ G C  G LN+A  + N++      PN V +T L+DG CK G +  
Sbjct: 266 -----DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ +F  + + G     +TY  L+ G   N    +  +  + M   G +P +++YN LI+
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC   ++ E   L  EM  +E+  + VTY+TL+ GLC+  R QEA  L  +M  +G+ P
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +++TY+ L+DG C  G  D+A +L   ++ +   P +V YN+LI     AG  ++A +L 
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            ++   GI P+  TYTI+I   ++    ++A+E++  M+  GF P+  +Y V+I G    
Sbjct: 501 SKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQN 560

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            +   A +L + M   +   +   + M++
Sbjct: 561 QDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 139/310 (44%), Gaps = 35/310 (11%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N   + +    F  M       +VV +   +  + K+ +      L +QM + G++ NV 
Sbjct: 69  NSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVY 128

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL-------------------- 391
           + N LI+  C       A  +  ++   G  P  +T+N L                    
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188

Query: 392 ---------------IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
                          I    K+GN+ MA  L+R+MEE+G  P+ V YT +IDS  +   +
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
             A ++ S M   G  PDV TY  ++HG C  G++ EA+ LFN M    + PN V + ++
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G CKEG    A  +   M +KG  PN  +Y++ +   C + +  EA+ +L+ M+  G 
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368

Query: 557 KPSVSLYNIL 566
            P V  YNIL
Sbjct: 369 APVVHSYNIL 378



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 34/328 (10%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N +  +  +  ++D   K  +  +A   F  M   G  P + T+N+L+            
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALM------------ 344

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                                  G C    +++A +VL+ + + G +P V  Y  LI+G 
Sbjct: 345 ----------------------DGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 382

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   ++ AK L  ++ E  L     TY+ L+ GL + G  ++    +++M  +G+ P L
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY+ L+   C  G + E  KL   M+  ++  ++V YN LI G+    +++ A+ L  +
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           +   GI P + TY  +I G    G +D+A+ LF +++ +G  P+  +YNV+I+ F +  +
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562

Query: 401 SKMASDLVREMEERGITPSEVTYTILID 428
           S  A  L+ EM  +  +    T+ +L+D
Sbjct: 563 SSTAIRLIDEMVGKRFSADSSTFQMLLD 590


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/490 (31%), Positives = 240/490 (48%), Gaps = 38/490 (7%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVY 176
           K  + D A   + +ML+SG+RP   TFN+++  + K     +  L  S   R     + +
Sbjct: 179 KFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAF 238

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI G C   +L+ AF + +++ + G  PN V Y++LI+G C  G +E A  +  ++
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298

Query: 237 GELGLVATQHTYTV-----------------------------------LICGLFKNGLQ 261
            + G+  T +TYT+                                   LI GL ++G  
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +     Y KM  +G+ P+  TYN LI++ C EG+    F +F  M       +  TYN +
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   C    +Q+A  + D+M  AG SPNVITYN LI G+C  G  + A RL   +K NG 
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P   TY  LI  FS+ G  + A+ L   M E GI+P+ VTYT +ID +     ++ A  
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M +SG  P   TY V+I G     ++ EA      M +  L PN + Y   I G C
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV--LLNQMLKLGLKPS 559
           + G +  A ++  EM ++   PN+ +YSS I  LCQ+G+  +AE+  LL ++   G +P+
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658

Query: 560 VSLYNILYRA 569
           V  Y  L + 
Sbjct: 659 VDTYTTLVKG 668



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/461 (33%), Positives = 239/461 (51%), Gaps = 3/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  H ++   D A   F +M+  G  P S T+++L+  +      ++      E  
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +E  VY++ I +   C+AG  ++A E+L ++++ G  PN+  +T+LI G  ++G  E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L+ K+   GLV T  TY  LI  L   G  +  F  ++ M  +G  PS  TYN +I
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G + +   +FD+M     + NV+TYNTLI G CK+  +  A RLL+ MK  G+ 
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TY +LI GF   G+ + A  LF  +  +G SP+ VTY  +I  +        A  L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M E G  PS  TY ++I  F +++ + +A      M K G  P+V TY   I GLC 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA--LRLLGEMNEKGLVPNI 525
            G    A K+F+ M +    PN   Y+ +I+G C+EG +  A    LL  +   G  PN+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y++ +  LC +G+  EA+ L+  M K GL+PS  +Y  L
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 237/513 (46%), Gaps = 28/513 (5%)

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY----- 128
           IS  ++S  +   S LCHL+        P  K     +I+  H  +    +  F+     
Sbjct: 54  ISTILSSPKWEHSSELCHLS--------PKLKPHHVVNILQTHKNTDSVLRFFFWISRRK 105

Query: 129 --------FHQMLDSGVRPR-SNTFNSLLIFVIKSC----SFDKGWLFFSENRCKVEL-- 173
                   F  ML+  VR R     + + I +IKSC       +   F SE   K +   
Sbjct: 106 FFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY 165

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            + SF  L+    +   ++ A ++  ++   G  P+++ + ++I+  CK G ++ AK++ 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             I          TYT LI G  +N      F  +++M  +G  P+  TY+ LI+  C+E
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E   + +EM  + +   V TY   +  LC      EA  LL +MK  G  PN+ T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G    G+ + A  L++++ ++G  P+ VTYN LI      G  + A  + + M  
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  PS  TY  +I  F    D++KA  ++  M K+G SP+V TY  LI+G C +GN+  
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M    L+P+   Y  +I G+ + G    A  L   M E G+ PN  +Y++ I 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                 K  +A  L  +M++ G  PS   YN++
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 200/442 (45%), Gaps = 38/442 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIK 183
           A+  +H+ML  G+ P + T+N+L+  +     F+  +  F        L    ++  +IK
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C  GD+ KA  + +++ + G SPNV+ Y +LI G CK G++  A  L   +   GL  
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP 480

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TYT LI G  + G  +     +  M  +G+SP+  TY  +I  Y N  KV +   LF
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            +M       +  TYN +I G  K   + EAE    +M   G+ PNVITY   IDG C  
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 364 GETDKAFRLFNQLKSN-------------------------------------GQSPSVV 386
           G T  AF++F++++                                       G  P+V 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  L++     G    A  LV  M+++G+ PSE  Y  L+    ++  +E A  ++  M
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              GF   +  Y  LI  LC +  ++EA  +F +M E     ++VV+ +++ G  KEG +
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGET 780

Query: 507 YRALRLLGEMNEKGLVPNIASY 528
              L+LL  M  +    N  +Y
Sbjct: 781 DLCLKLLHVMESRNCTLNFQTY 802



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 178/405 (43%), Gaps = 38/405 (9%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S   +  ++ Y  II          +A+  F +ML +G  P   T+N+L+    K  + +
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                    +   ++ D +++  LI G    G L  A  +   + E G SPN V YT++I
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL---------------------- 255
           DG      ++ A  LF K+ E G + +  TY V+I G                       
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 256 --------FKNGLQKDG-----FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV--SEGF 300
                   F +GL ++G     F+ + +M+     P+LYTY+ LI+  C EG+   +E +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L   + H     NV TY TL+ GLC E R  EA++L+  M+  G+ P+   Y  L+ G 
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C   + + A  +F  + + G    +  Y  LI A  K    + A  + + M E+     E
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           V +T+L+D  ++  + +   ++  +M+    + +  TY +L   L
Sbjct: 765 VVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 23/330 (6%)

Query: 81  SSFTPRSLLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           S F+    L H T LF        S N VT    Y +IID +      D AL  F +M++
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVT----YTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
           SG  P S T+N ++    K+ S  +     +EN C   +      +V ++   I G C  
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISE-----AENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM--LFRKIGELGLVATQH 246
           G    AF++ +++E+  + PN+  Y+SLI G C+ G  E A+M  L  ++   G      
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TYT L+ GL   G   +  +    MQ  G+ PS   Y  L+   C   KV     +F  M
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  ++  Y  LIC LCKE  ++EA+ +   M     + + + +  L+DG    GET
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGET 780

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           D   +L + ++S   + +  TY +L R  S
Sbjct: 781 DLCLKLLHVMESRNCTLNFQTYVMLARELS 810


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 259/528 (49%), Gaps = 25/528 (4%)

Query: 65  AAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL--------YESIIDAH 116
           AA  L + +  GR  +++   R L     +L P   +P   S L        Y +++ A 
Sbjct: 12  AAPYLAVLLRRGRGEAAARLNRHL-----RLLPLPESPALLSALPSVRDAVSYNTVLAAL 66

Query: 117 LKSRLSDQALFYFHQMLDS---GVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVE 172
            +    D ALF    M        RP + ++ +L+        +     L  S   C V 
Sbjct: 67  CRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVR 126

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            DV ++G LI+G C+A D++ A E+LN++ E G  PNVV+Y+ L+ G CK G  E    +
Sbjct: 127 PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKV 186

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F ++   G+      YT LI  L ++G  K      + M   G+ P++ TYN LI+  C 
Sbjct: 187 FEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCK 246

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---ISPN 349
           EG V E   L   M  + V  +VVTYNTLI GL   + + EA  LL++M M G   + P+
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM-MQGETRVRPD 305

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           ++T+N +I G C  G   +A ++   +  NG   ++V +N+LI    +    K A +L+ 
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM   G+ P   TY+ILI+ F +   +E+A    S M+  G  P+   Y  L+  +C +G
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M +A  LFN M +   + +   Y+ MI G  K G    A   L +M ++GL+P+  +YS
Sbjct: 426 MMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             I +  + G    AE +L QM   G  P V++++ L   Y AK + E
Sbjct: 485 IPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTE 532



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 247/558 (44%), Gaps = 59/558 (10%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL--------LSKMSSHSHAAAQTLILK 72
           ++ PP +A        R+G       ++  LRLL        LS + S   A +   +L 
Sbjct: 5   SRTPPRRAAPYLAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLA 64

Query: 73  II--SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
            +   G + ++ F  R ++ H  +L   +S P   S  Y +++ A    R + QA+    
Sbjct: 65  ALCRQGCLDAALFLLR-VMSHEPRL---ASRPNAIS--YTTLMRALCADRRAAQAVGLLR 118

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCCEA 188
            M D GVRP   T+ +L+  +  +   D      +E  C+  +E +V  +  L+ G C+ 
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNE-MCESGIEPNVVVYSCLLHGYCKT 177

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G      +V  ++   G  P+VV+YT+LID  C++G +++A  +   + E GL     TY
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            VLI  + K G  ++  +  + M   GV P + TYN LI    +  ++ E   L +EM  
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 309 REVA-------------------------------------CNVVTYNTLICGLCKEMRV 331
            E                                       CN+V +N LI GL +  +V
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKV 357

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           ++A  L+D+M  +G+ P+  TY+ LI+GFC   + ++A    ++++  G  P  V Y  L
Sbjct: 358 KKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPL 417

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           ++A    G    A DL  EM+ R        Y+ +I    +S + + A E    M   G 
Sbjct: 418 LKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGL 476

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD  TY + I+     G++  A ++   M  +   P+  V++ +I GY  +G++ + L 
Sbjct: 477 IPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILE 536

Query: 512 LLGEMNEK--GLVPNIAS 527
           L  EM  K   L P I S
Sbjct: 537 LTREMTAKDVALDPKIIS 554



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 4/336 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I++  K     +AL     M + GV+P   T+N+L+  +      D+      E  
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
               +V  D+ +F  +I G C+ G + +A +V   + E G   N+V +  LI G  +   
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +++A  L  ++   GL     TY++LI G  K    +    +  +M+  G+ P    Y  
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C++G + +   LF+EM  R    +   Y+T+I G  K    + AE  L  M   G
Sbjct: 417 LLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEG 475

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TY+  I+ F  +G+   A R+  Q+ ++G  P V  ++ LI+ +   G+++   
Sbjct: 476 LIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKIL 535

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           +L REM  + +       + ++ S   S + +K  +
Sbjct: 536 ELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQ 571


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 228/440 (51%), Gaps = 1/440 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
           QM  +G+ P   T + L+         D  +  FS+  +  ++ D  +F  LI G C+ G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
              +A E  +  E  G  P V  YT++I+G CK G+   A  LF+K+ E G      TY 
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI  L K+ L  +  + +  M+   +SP ++TYN LI   CN  +  E   L +EM   
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N+ T+N L+  +CKE +V EA+ +   M   G+ P+V+TY+ L+ G+    E  +A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +LF+ + + G  P   +YN+LI+ + KA     A  L  EM  +G+TP  V Y  LI  
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   + +A +++  M  +G  PD++TY +L+ G C +G + +A +LF  M  T L+P+
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
             +YN++I   CK GN   A +L  E+  +GL+PN+  Y++ I  LC++G   EA     
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            M   G  P    YN++ R 
Sbjct: 540 NMEGDGCPPDEFSYNVIIRG 559



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 220/446 (49%), Gaps = 1/446 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           +ID     +  D A   F +M+  G++P + TFN+L+  + K   F +   FF +     
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            +  VY++  +I G C+ G+   A  +  ++EE G  PNVV Y  LID  CK+  +  A 
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F  +    +     TY  LI GL      K+      +M    + P+++T+N L+   
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C EGKVSE   +F  M    V  +VVTY++L+ G    M + EA +L D M   G  P+ 
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA 375

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            +YN LI G+C A   D+A +LFN++   G +P  V YN LI    + G  + A DL + 
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKN 435

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M   G  P   TY++L+D F +   + KAF ++ +MQ +   PD+  Y +LI  +C  GN
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +K+A KLF+ ++   L PN  +Y  +I   CKEG    AL     M   G  P+  SY+ 
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            I    Q      A  L+ +M   G 
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 185/380 (48%), Gaps = 44/380 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y  +ID+  K +L ++AL  F  M    + P   T+NSL+  +   C+F + W     L 
Sbjct: 238 YNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGL---CNFRR-WKEASALL 293

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  +  ++++F +L+   C+ G +++A  V   + EMG  P+VV Y+SL+ G    
Sbjct: 294 NEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            +I  A+ LF                                   + M   G  P  ++Y
Sbjct: 354 MEIVEARKLF-----------------------------------DAMITKGCKPDAFSY 378

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI  YC   ++ E  +LF+EM H+ +  + V YNTLI GLC+  R++EA+ L   M  
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  P++ TY+ L+DGFC  G   KAFRLF  ++S    P +  YN+LI A  K GN K 
Sbjct: 439 NGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD 498

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  E+  +G+ P+   YT +I++  +   +++A E +  M+  G  PD ++Y V+I 
Sbjct: 499 ARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558

Query: 464 GLCMKGNMKEASKLFNSMWE 483
           G     +   A++L   M +
Sbjct: 559 GFLQYKDESRAAQLIGEMRD 578



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 167/333 (50%), Gaps = 35/333 (10%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M+L G+SP +YT + LI  + +  +V   F +F +M    +  + VT+NTLI GLCK 
Sbjct: 119 KQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV 178

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            +  +A    D  + +G  P V TY  +I+G C  GET  A  LF +++  G  P+VVTY
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238

Query: 389 NVLIRAFSK------------------------AGNS-----------KMASDLVREMEE 413
           N+LI +  K                          NS           K AS L+ EM  
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             I P+  T+ +L+D+  +   + +A  ++  M + G  PDV TY  L++G  ++  + E
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KLF++M     +P+   YN++I GYCK      A +L  EM  +GL P+  +Y++ I 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LCQ G+  EA+ L   M   G  P +  Y++L
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSML 451



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 348 PNVITYNKLIDGFCDAGETDKA-FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           P +I + KL+      G+   A   L  Q++  G SP + T ++LI  FS      +A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  +M + G+ P  VT+  LI+   +     +A E +   + SG  P VYTY  +I+GLC
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G    A+ LF  M E   +PN V YN++I   CK+     AL +   M  K + P+I 
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+S I  LC   +W EA  LLN+M  L + P++  +N+L  A
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 222/417 (53%), Gaps = 1/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +II+   K     +A     +ML+ G+ P + T+N+LL+   +  +F +    F E  
Sbjct: 191 YNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEML 250

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  D+ SF  LI        L++A      +++ G  P+ VIYT L+ G C+NG++ 
Sbjct: 251 RQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNML 310

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++ E G V     Y  ++ GL K  +  D  + +++M   G  P  YT+  LI
Sbjct: 311 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +C +G +++   LF  M  R +  ++V YNTLI G CK   +++A  L D M    I 
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 430

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN ITY  LI+ +C  G   +AFRL++ +   G  P++VT N +I+ + ++G+S  A + 
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M  +G+ P  ++Y  LI+ FVR D+M+KAF   + M+K G  PD+ TY V+++G C 
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +G M+EA  +   M E  + P+   Y  +I G+  + N   A R   EM ++G  P+
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 228/473 (48%), Gaps = 36/473 (7%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEA 188
            +++ SG+     T N ++  + K   FD    F SE     +  D+ ++  LI   C  
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G L +AFE++N + + G  P++  Y ++I+G CK G   RAK +  ++  +GL     TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 249 TVLICG----------------LFKNGLQKDGFEF-------------------YEKMQL 273
             L+                  + + G+  D   F                   +  M+ 
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P    Y  L+H YC  G + E  K+ DEM  +    +V+ YNT++ GLCKE  + +
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A++L D+M   G  P+  T+  LI G C  G   KA  LF  +      P +V YN LI 
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F K G  + AS+L   M  R I P+ +TY ILI+++     + +AF ++ +M + G  P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            + T   +I G C  G+  +A +    M    + P+ + YN +I G+ +E N  +A   +
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWI 526

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M ++GL+P+I +Y+  +   C+ G+  EAE++L +M++ G+ P  S Y  L
Sbjct: 527 NKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 206/392 (52%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +LI+   +A  L +  E    L   G+  ++    SL+ G  K   +E A  + R++ 
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+    +T  +++  L K+G   D   F  +M+ NG+   + TYN LI  YC EG + 
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E F++ + M  + +  ++ TYN +I GLCK+ R   A+ +L +M   G+SP+  TYN L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C      +A  +F ++   G  P +V+++ LI  FS+  +   A    R+M++ G+ 
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  V YT+L+  + R+ +M +A ++   M + G   DV  Y  +++GLC +  + +A KL
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F+ M E    P+   +  +I G+C++GN  +AL L G M ++ + P+I +Y++ I   C+
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 410

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G+  +A  L + M+   + P+   Y IL  A
Sbjct: 411 VGEMEKASELWDGMISRKIFPNHITYGILINA 442



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 191/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  +   +  A+EV  ++   G   NV     +++  CK+G  +  K    ++   G
Sbjct: 89  LLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG 148

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           + A   TY  LI    + GL ++ FE    M   G+ PSL+TYN +I+  C +G+ +   
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +  EM +  ++ +  TYNTL+   C+     EA+ +  +M   G+ P++++++ LI  F
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
                 D+A   F  +K  G  P  V Y VL+  + + GN   A  +  EM E+G     
Sbjct: 269 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 328

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           + Y  +++   +   +  A +++  M + G  PD YT+  LIHG C  GNM +A  LF +
Sbjct: 329 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 388

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  ++P+ V YN +I G+CK G   +A  L   M  + + PN  +Y   I   C  G 
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  L + M++ G+KP++   N + + 
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 246/469 (52%), Gaps = 1/469 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  Y  +I    ++     A+  F +M +  V P   T+N+++   IK    + G+
Sbjct: 196 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 255

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               +  C  ++ +  ++ +L+ G C AG + +   +L+++      P+   Y+ L DG 
Sbjct: 256 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 315

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +NGD +    LF K  + G+    +T ++L+ GL K+G      E  + +   G+ P+ 
Sbjct: 316 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             YN LI+ YC  G++   F  F +M+ R +  + +TYN LI GLCK  R+  A+ LL +
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G++P V T+N LID +   G+ +K F + ++++ NG  P+VV+Y  ++ AF K G 
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ +M  + + P+   Y  +ID++V     ++AF +   M+ +G SP + TY +
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + EA ++ NS+   +L P+ V YN +I   C  GN  +AL L   M++ G
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +   + +Y   I  L   G+  E E L  +M++  + PS +++NI+  A
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 36/447 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           Y ++ID H+K    +       QM+  G++P + T+N LL  + ++              
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297

Query: 156 -------SFDKGWLF--FSEN--------------RCKVELDVYSFGILIKGCCEAGDLN 192
                   F    LF   S N              +  V +  Y+  IL+ G C+ G ++
Sbjct: 298 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 357

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A EVL  L   G  P  VIY +LI+G C+ G++E A   F ++    +     TY  LI
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K     +  +   +MQ NGV+P++ T+N LI  Y   G++ + F +  EM+   + 
Sbjct: 418 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y +++   CK  ++ EA  +LD M    + PN   YN +ID + + G  D+AF L
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KSNG SPS+VTYN+LI+          A +++  +    + P  V+Y  LI +   
Sbjct: 538 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 597

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +++KA ++   M K G    V TY  LI GL   G + E   L+  M +  + P++ +
Sbjct: 598 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 657

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +N+M+  Y K GN  +A  L  EM +K
Sbjct: 658 HNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 190/416 (45%), Gaps = 39/416 (9%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TY 248
           D+ +AF +L      G  P+   +   +  C   GD+  A  + R++G  G       +Y
Sbjct: 147 DVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 203

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            V+I G+++ G   D  E +++M    V P+  TYN +I  +   G +  GF+L D+M  
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N +TYN L+ GLC+  R+ E   LLD+M    + P+  TY+ L DG    G++  
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF +   NG +    T ++L+    K G   +A ++++ +   G+ P+ V Y  LI+
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + ++ ++E AF  +  M+     PD  TY  LI+GLC    +  A  L   M +  + P
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 443

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
               +N +I  Y + G   +   +L EM E GL PN+ SY S +   C++GK PEA  +L
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503

Query: 549 NQMLKL-----------------------------------GLKPSVSLYNILYRA 569
           + M                                      G+ PS+  YN+L + 
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 1/308 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y ++I+ + ++   + A   F QM    ++P   T+N+L+  + K+        L    
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V   V +F  LI      G L K F VL++++E G  PNVV Y S+++  CKNG I
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 496

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   +    ++     Y  +I    ++G     F   EKM+ NG+SPS+ TYN L
Sbjct: 497 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 556

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   CN+ ++SE  ++ + + +  +  + V+YNTLI   C    + +A  L  +M   GI
Sbjct: 557 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              V TY++LI G   AG  ++   L+ ++  N   PS   +N+++ A+SK GN   A D
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 676

Query: 407 LVREMEER 414
           L +EM ++
Sbjct: 677 LRKEMLQK 684



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 5/240 (2%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTY 388
           R  +  R    +  AG  P+   +NK +     AG+  +A  +  ++  +G   P+  +Y
Sbjct: 144 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 203

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           NV+I    +AG    A ++  EM ER + P+ +TY  +ID  ++  D+E  F +   M  
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+  TY VL+ GLC  G M E S L + M   K+ P+   Y+++  G  + G+S  
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323

Query: 509 ALRLLGEMNEKGLVPNIASYSSTI--GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L L G+  + G+   I  Y+ +I    LC+DGK   AE +L  ++  GL P+  +YN L
Sbjct: 324 MLSLFGKYLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 3/204 (1%)

Query: 367 DKAFRLFNQLKSNGQSP--SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           D A RL + L    ++P  S+ + N+L+ A    G           +   G  P    + 
Sbjct: 109 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWN 168

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGF-SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             + + V + D+ +A  M   M + G   P+ ++Y V+I G+   G   +A ++F+ M E
Sbjct: 169 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 228

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + PN + YN MI G+ K G+     RL  +M   GL PN  +Y+  +  LC+ G+  E
Sbjct: 229 RAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGE 288

Query: 544 AEVLLNQMLKLGLKPSVSLYNILY 567
              LL++M    + P    Y+IL+
Sbjct: 289 TSALLDEMASQKMVPDGFTYSILF 312



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 34/204 (16%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           +  +++Y +IIDA+++   +DQA     +M  +G+ P   T+N                 
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN----------------- 554

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                            +LIKG C    +++A E++N L      P+ V Y +LI  CC 
Sbjct: 555 -----------------LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 597

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G+I++A  L +++ + G+ +T  TY  LI GL   G   +    Y+KM  N V PS   
Sbjct: 598 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 657

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM 306
           +N ++  Y   G   +   L  EM
Sbjct: 658 HNIMVEAYSKYGNEIKAEDLRKEM 681


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 244/474 (51%), Gaps = 40/474 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           + QML+SG++P   TFN+L+  + K     +  L  S+  +  +  DV+++  LI G C 
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             +L+ AF V +++ + G  PN V Y++LI+G C  G ++ A  +  ++ E G+  T +T
Sbjct: 246 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305

Query: 248 YTV-----------------------------------LICGLFKNGLQKDGFEFYEKMQ 272
           YT+                                   LI GL + G  +     Y KM 
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ P+  TYN LI+E C  G+ S   K+F  M       N  TYN +I GLC    ++
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  L ++M   G  P V+TYN LI+G+   G  + A RL + +K NG  P   TYN L+
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             FSK G  + AS   +EM E G+ P+ V+YT LID   +   ++ A  +   M++ G +
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V +Y  +I+GL  +    EA K+ + M E  L PN + Y  +I G C+ G +  A ++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +M ++  +PN+ +YSS I  LCQ+GK  EAE    +M ++G +P++  Y+ L
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTL 655



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 225/467 (48%), Gaps = 34/467 (7%)

Query: 119 SRLS--DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DV 175
           SRL   + A+  +H+ML  G+ P + T+N+L+  +     F      F        L + 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  +IKG C  GD+ KA  +  ++ +MG  P VV Y +LI+G    G++  A  L   
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E G    + TY  L+ G  K G  +    ++++M   G++P+  +Y  LI  +  +GK
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V     L   M       NV +YN +I GL KE R  EAE++ D+M   G+ PNVITY  
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 356 LIDGFCDAGETDKAFRLFNQLKSN-------------------------------GQSPS 384
           LIDG C  G T  AF++F+ ++                                 G  P+
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPT 648

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           + TY+ L+    + G    A  LV++M+ERG  P    Y  L+ +  ++ +++ A +++ 
Sbjct: 649 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFH 708

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            ++  GF   +  Y  LI  LC  G ++EA  LF++M E +   +++V+ +++ G  KEG
Sbjct: 709 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
                ++LL  M  K   PNI +Y      L + GK  E+E L +++
Sbjct: 769 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 238/529 (44%), Gaps = 69/529 (13%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L+Q+F    +P   +  Y S+I  H ++R  D A   F +M+  G  P S T+++L+  +
Sbjct: 221 LSQIFQYDLSPDVFT--YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
                 D+      E   K +E  VY++ + I   C      +A E++ ++++ G  PNV
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLV---------------------------- 242
             YT+LI G  + G +E A  L+ K+ + GLV                            
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 243 -------ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
                  A   TY  +I GL   G  +     +EKM   G  P++ TYN LI+ Y  +G 
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V+   +L D M+      +  TYN L+ G  K  +++ A     +M   G++PN ++Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG    G+ D A  L  +++  G +P+V +YN +I   SK      A  +  +M E+G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG---------------- 459
           + P+ +TYT LID   R+   + AF+++  M+K    P++YTY                 
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638

Query: 460 ---------------VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                           L+ GLC KG   EA +L   M E    P+  +Y  ++  +CK  
Sbjct: 639 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 698

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
               AL++   +  KG   +++ Y + I  LC+ G+  EA+ L + ML+
Sbjct: 699 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 747



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 200/408 (49%), Gaps = 35/408 (8%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  Q+   G  P+++ + +LI+   K G +  A+++  +I +  L     TYT LI 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM------- 306
           G  +N      F  +++M   G  P+  TY+ LI+  CNEG+V E   + +EM       
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 307 --------------------------RHREVAC--NVVTYNTLICGLCKEMRVQEAERLL 338
                                     R ++  C  NV TY  LI GL +  +++ A  L 
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ PN +TYN LI+  C  G    A ++F+ ++ +G   +  TYN +I+     
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G+ + A  L  +M + G  P+ VTY  LI+ ++   ++  A  +  LM+++G  PD +TY
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G    G ++ AS  F  M E  L PN V Y  +I G+ K+G    AL LL  M E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G  PN+ SY++ I  L ++ ++ EAE + ++M++ GL P+V  Y  L
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 190/387 (49%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ++IK C    ++ +  + LN++  MGF  ++    +L+    K   +E A+ L++++   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+  +  T+  LI  L K G  ++      ++    +SP ++TY  LI  +C    +   
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F +FD M       N VTY+TLI GLC E RV EA  +L++M   GI P V TY   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C     ++A  L  ++K  G  P+V TY  LI   S+ G  ++A  L  +M + G+ P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY  LI+          A +++  M+  G   +  TY  +I GLC+ G++++A  LF 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    P  V YN +I GY  +GN   A RLL  M E G  P+  +Y+  +    + G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           K   A     +M++ GL P+   Y  L
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTAL 519



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 189/383 (49%), Gaps = 9/383 (2%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P+     Y ++I+ +L     + A      M ++G  P   T+N L+    K    +   
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 162 LFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            +F E   C +  +  S+  LI G  + G ++ A  +L ++EEMG +PNV  Y ++I+G 
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            K      A+ +  K+ E GL+    TYT LI GL +NG  +  F+ +  M+     P+L
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLL 338
           YTY+ LI+  C EGK  E        R  E+ C   + TY+TL+ GLC++ R  EAE+L+
Sbjct: 619 YTYSSLIYGLCQEGKADEA------ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 672

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             MK  G  P+   Y  L+   C   E D A ++F+ +++ G    +  Y  LI A  KA
Sbjct: 673 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 732

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G  + A  L   M E+     E+ +T+L+D  ++  +++   ++  +M+   F+P++ TY
Sbjct: 733 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792

Query: 459 GVLIHGLCMKGNMKEASKLFNSM 481
            +L   L   G   E+  L + +
Sbjct: 793 VILGRELSRIGKSIESEPLADKL 815



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 1/378 (0%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           ++N    +LN+L  +  F+P   I   +I  C    +I R      +I  +G   + ++ 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             L+  L K  + +     Y++M  +G+ PSL T+N LI+    +GKV E   +  ++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            +++ +V TY +LI G C+   +  A  + D+M   G  PN +TY+ LI+G C+ G  D+
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +  ++   G  P+V TY + I A     + + A +LV  M++RG  P+  TYT LI 
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R   +E A  +Y  M K G  P+  TY  LI+ LC+ G    A K+F+ M       
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N   YN +I G C  G+  +A+ L  +M + G +P + +Y++ I      G    A  LL
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 549 NQMLKLGLKPSVSLYNIL 566
           + M + G +P    YN L
Sbjct: 467 DLMKENGCEPDEWTYNEL 484



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 165/344 (47%), Gaps = 26/344 (7%)

Query: 76  GRITSSSFTPRSLL-CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           G++ S+SF  + ++ C L      + NPV+    Y ++ID H K    D AL    +M +
Sbjct: 492 GKLESASFYFQEMVECGL------NPNPVS----YTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELD------VYSFGILIKGCCEA 188
            G  P   ++N+++  + K   F +     +E  C   ++      V ++  LI G C  
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSE-----AEKICDKMVEQGLLPNVITYTTLIDGLCRN 596

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G    AF++ + +E+    PN+  Y+SLI G C+ G  + A+    ++ E+G   T  TY
Sbjct: 597 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTY 652

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           + L+ GL + G   +  +  + M+  G  P    Y  L+  +C   +V    K+F  +  
Sbjct: 653 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 712

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           +    ++  Y  LIC LCK  +V+EA+ L D M     + + I +  L+DG    GE D 
Sbjct: 713 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL 772

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
             +L + ++S   +P++ TY +L R  S+ G S  +  L  +++
Sbjct: 773 CMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLI--RAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           KA  +   +  +  + SV+ +   I  R F K   +   S L R + +R   P++    +
Sbjct: 74  KAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRIL 133

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I +    +++ +  +  + +   GF   +Y+   L+  L     ++ A  L+  M  + 
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+ + +N +I    K+G    A  +L ++ +  L P++ +Y+S I   C++     A 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            + ++M+K G  P+   Y+ L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTL 274


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 217/396 (54%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +   L+ G C +G   +A  +++++ E G  PN V Y  +++  CK+G    A  L 
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           RK+ E  +      Y+++I GL K+G   + F  + +M++ G++ ++ TYN LI  +CN 
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  +G KL  +M  R++  NVVT++ LI    KE +++EAE L  +M   GI+P+ ITY
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 469

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDGFC     DKA ++ + + S G  P++ T+N+LI  + KA       +L R+M  
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 529

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTY  LI  F     +  A E++  M      P++ TY +L+ GLC  G  ++
Sbjct: 530 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 589

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F  + ++K+E +  +YN++I G C       A  L   +  KG+ P + +Y+  IG
Sbjct: 590 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G   EAE+L  +M + G  P    YNIL RA
Sbjct: 650 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 244/482 (50%), Gaps = 6/482 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + ++  +  N   + RL   ++D       +D A+  F  M+ S   P    F+ L   +
Sbjct: 142 IARMVANDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAI 196

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K+  +D       +   K +  ++Y+  I+I   C    L  AF  + ++ ++G+ PN 
Sbjct: 197 AKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT 256

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + +++LI+G C  G +  A  L  ++ E+G      T   L+ GL  +G + +     +K
Sbjct: 257 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 316

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G  P+  TY  +++  C  G+ +   +L  +M  R +  + V Y+ +I GLCK   
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A  L ++M+M GI+ N+ITYN LI GFC+AG  D   +L   +     +P+VVT++V
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI +F K G  + A +L +EM  RGI P  +TYT LID F + + ++KA +M  LM   G
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P++ T+ +LI+G C    + +  +LF  M    +  + V YN +I G+C+ G    A 
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            L  EM  + + PNI +Y   +  LC +G+  +A  +  ++ K  ++  + +YNI+    
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616

Query: 571 NN 572
            N
Sbjct: 617 CN 618



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 233/448 (52%), Gaps = 6/448 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVEL 173
           L+ R+S +AL    +M++ G +P   T N+L+  +  S    +  L      E  C+   
Sbjct: 268 LEGRVS-EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP-- 324

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +  ++G ++   C++G    A E+L ++EE     + V Y+ +IDG CK+G ++ A  LF
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+     TY +LI G    G   DG +    M    ++P++ T++ LI  +  E
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+ E  +L  EM HR +A + +TY +LI G CKE  + +A +++D M   G  PN+ T+
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G+C A   D    LF ++   G     VTYN LI+ F + G   +A +L +EM  
Sbjct: 505 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           R + P+ VTY IL+D    + + EKA E++  ++KS    D+  Y ++IHG+C    + +
Sbjct: 565 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 624

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  LF S+    ++P    YN+MI G CK+G    A  L  +M E G  P+  +Y+  I 
Sbjct: 625 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 684

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
               DG   ++  L+ ++ + G     S
Sbjct: 685 AHLGDGDATKSVKLIEELKRCGFSVDAS 712



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 213/417 (51%), Gaps = 3/417 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
           +A+    +M++ G +P + T+  +L  + KS   +     L   E R  ++LD   + I+
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSII 367

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G L+ AF + N++E  G + N++ Y  LI G C  G  +    L R + +  +
Sbjct: 368 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 427

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T++VLI    K G  ++  E +++M   G++P   TY  LI  +C E  + +  +
Sbjct: 428 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 487

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M  +    N+ T+N LI G CK  R+ +   L  +M + G+  + +TYN LI GFC
Sbjct: 488 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 547

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           + G+ + A  LF ++ S    P++VTY +L+      G S+ A ++  ++E+  +     
Sbjct: 548 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 607

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y I+I     +  ++ A++++  +   G  P V TY ++I GLC KG + EA  LF  M
Sbjct: 608 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 667

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
            E    P+   YN++I  +  +G++ ++++L+ E+   G   + ++    I +L  D
Sbjct: 668 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 207/396 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+ +++ G C+   L K  +++ +L+  G  PN   Y S+I   CK G +  A+ + 
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R +    +      YT LI G  K+G     ++ +++M+   + P   TY  +IH  C  
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E  KLF EM  + +  + VTY  LI G CK   ++EA  L +QM   G++PNV+TY
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+DG C  GE D A  L +++   G  P+V TYN LI    K GN + A  L+ EM+ 
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P  +TYT ++D++ +  +M KA E+  +M   G  P + T+ VL++G CM G +++
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLED 585

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +L   M +  + PN   +N ++  YC   N    + +   M+ +G+VP+  +Y+  I 
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+     EA  L  +M++ G   + + YN L + 
Sbjct: 646 GHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 232/445 (52%), Gaps = 6/445 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFFSE-NRCKVELDVYSFGILIKG 184
           F ++L+ GV    ++ N  L  +  S SFD     +  F E +   V  +  S+ I++  
Sbjct: 204 FDKLLNYGVLVSVDSCNLFLARL--SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHL 261

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G + +A  +L Q+E  G  P+VV Y+ ++DG C+   + +   L  ++   GL   
Sbjct: 262 LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPN 321

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q+TY  +I  L K G   +  +    M+   + P    Y  LI  +   G VS  +KLFD
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM+ +++  + VTY ++I GLC+  +V EA +L  +M   G+ P+ +TY  LIDG+C AG
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAG 441

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           E  +AF L NQ+   G +P+VVTY  L+    K G   +A++L+ EM E+G+ P+  TY 
Sbjct: 442 EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYN 501

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LI+   +  ++E+A ++   M  +GF PD  TY  ++   C  G M +A +L   M + 
Sbjct: 502 ALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDK 561

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+P  V +N+++ G+C  G      RL+  M +KG++PN  +++S +   C        
Sbjct: 562 GLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRAT 621

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             +   M   G+ P  + YNIL + 
Sbjct: 622 IEIYKGMHAQGVVPDTNTYNILIKG 646



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 220/439 (50%), Gaps = 11/439 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+D + +     + L    ++   G++P   T+NS++ F+ K+     G +  +E  
Sbjct: 290 YSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKT-----GRVVEAEQV 344

Query: 169 CKVEL------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +V        D   +  LI G  ++G+++  +++ ++++     P+ V YTS+I G C+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +  A+ LF ++   GL   + TYT LI G  K G  K+ F  + +M   G++P++ T
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  L+   C  G+V    +L  EM  + +  NV TYN LI GLCK   +++A +L+++M 
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           +AG  P+ ITY  ++D +C  GE  KA  L   +   G  P++VT+NVL+  F  +G  +
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
               L++ M ++GI P+  T+  L+  +   ++M    E+Y  M   G  PD  TY +LI
Sbjct: 585 DGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C   NMKEA  L   M E         YN +I G+ K      A +L  EM   G +
Sbjct: 645 KGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704

Query: 523 PNIASYSSTIGVLCQDGKW 541
                Y   + V  ++G W
Sbjct: 705 AEKEIYDIFVDVNYEEGNW 723



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 201/391 (51%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y++  +I   C+ G + +A +VL  ++     P+ V+YT+LI G  K+G++     LF +
Sbjct: 323 YTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDE 382

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +    +V    TYT +I GL + G   +  + + +M   G+ P   TY  LI  YC  G+
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E F L ++M  + +  NVVTY  L+ GLCK   V  A  LL +M   G+ PNV TYN 
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G C  G  ++A +L  ++   G  P  +TY  ++ A+ K G    A +L+R M ++G
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ VT+ +L++ F  S  +E    +   M   G  P+  T+  L+   C++ NM+   
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +++  M    + P+   YN++I G+CK  N   A  L  EM EKG     ASY+S I   
Sbjct: 623 EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  K+ EA  L  +M   G      +Y+I 
Sbjct: 683 YKRKKFEEARKLFEEMRTHGFIAEKEIYDIF 713



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 204/415 (49%), Gaps = 1/415 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y SII    K+    +A      M +  + P +  + +L+    KS +    +  F E  
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMK 384

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R K+  D  ++  +I G C+AG + +A ++ +++   G  P+ V YT+LIDG CK G+++
Sbjct: 385 RKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMK 444

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E GL     TYT L+ GL K G      E   +M   G+ P++ TYN LI
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G + +  KL +EM       + +TY T++   CK   + +A  LL  M   G+ 
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ 564

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P ++T+N L++GFC +G  +   RL   +   G  P+  T+N L++ +    N +   ++
Sbjct: 565 PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEI 624

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            + M  +G+ P   TY ILI    ++ +M++A+ ++  M + GFS    +Y  LI G   
Sbjct: 625 YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK 684

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +   +EA KLF  M          +Y++ +    +EGN    L L  E  EK LV
Sbjct: 685 RKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLV 739



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 173/352 (49%), Gaps = 11/352 (3%)

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ------KDGFEFYEKMQLNGVS 277
           G +  A  LF K+   G++ +  +     C LF   L       +  F  + +    GV 
Sbjct: 195 GLLLEAGKLFDKLLNYGVLVSVDS-----CNLFLARLSNSFDGIRTAFRVFREYSEVGVC 249

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            +  +YN ++H  C  GKV E   L  +M  R    +VV+Y+ ++ G C+  ++ +  +L
Sbjct: 250 WNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKL 309

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           +++++  G+ PN  TYN +I   C  G   +A ++   +K+    P  V Y  LI  F K
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +GN  +   L  EM+ + I P  VTYT +I    ++  + +A +++S M   G  PD  T
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G C  G MKEA  L N M E  L PN V Y  ++ G CK G    A  LL EM+
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EKGL PN+ +Y++ I  LC+ G   +A  L+ +M   G  P    Y  +  A
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/401 (34%), Positives = 211/401 (52%), Gaps = 9/401 (2%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + ++  +I G C++ DL    E+  +L E G  P+VV Y +LID  CK GD+E A+ L  
Sbjct: 37  IVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 96

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCN 292
            +   G V    TY+VLI GL K G   +  E  ++M      V P++ TYN  +   C 
Sbjct: 97  DMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 156

Query: 293 EGKVSEGFKLFDEMRHR--EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           +   +E  +L   +R     V+ + VT++TLI GLCK  ++ EA  + D M   G  PNV
Sbjct: 157 QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 216

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITYN L++G C A + ++A  +   +   G +P V+TY+VL+ AF KA     A +L+  
Sbjct: 217 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 276

Query: 411 MEERGITPS-----EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           M  RG TP+     +VT+ ILI    ++ + E+A  ++  M      PDV T+G LI GL
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G ++ A  + + M    + PN V YN ++ G CK G    A + L EM   G VP+ 
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y S +  LC+  +  +A  L++++   G  P    YNIL
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 437



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 248/481 (51%), Gaps = 21/481 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFH-QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y  ++ +  ++  + +AL  F  +M   GV P   T+N+++  + KS     G   F E 
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE- 62

Query: 168 RCKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              VE     DV ++  LI   C+AGDL +A  +   +   G  PNVV Y+ LI+G CK 
Sbjct: 63  --LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 224 GDIERAKMLFRKIGE--LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPS 279
           G I+ A+ L +++      ++    TY   + GL K  +  +  E    ++     VSP 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             T++ LI   C  G++ E   +FD+M       NV+TYN L+ GLCK  +++ A  +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV-----VTYNVLIRA 394
            M   G++P+VITY+ L+D FC A   D+A  L + + S G +P+V     VT+N+LI  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KAGN + AS L  EM  + + P  +T+  LID   ++  +E A ++  LM   G  P+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  L+HGLC  G ++EA +    M  +   P+ + Y  +++  C+   +  AL+L+ 
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS----VSLYNILYRAK 570
           E+   G  P+  +Y+  +  L + GK  +A  +L +M+  G +P      + ++ L+R+ 
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 571 N 571
           N
Sbjct: 481 N 481



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 218/405 (53%), Gaps = 10/405 (2%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           V  + I+++  C AGD  +A E+   ++   G +P +V Y ++I+G CK+ D+     LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ E G      TY  LI  L K G  ++    +  M   G  P++ TY+ LI+  C  
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 294 GKVSEGFKLFDEMRHR--EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPN 349
           G++ E  +L  EM  +  +V  N++TYN+ + GLCK+    EA  L+  ++     +SP+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +T++ LIDG C  G+ D+A  +F+ + + G  P+V+TYN L+    KA   + A  ++ 
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV-----YTYGVLIHG 464
            M ++G+TP  +TY++L+D+F ++  +++A E+   M   G +P+V      T+ +LI G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  GN ++AS LF  M    L+P+ + +  +I G CK G    A  +L  M   G+ PN
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +Y++ +  LC+ G+  EA   L +M+  G  P    Y  L  A
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 216/452 (47%), Gaps = 10/452 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID+  K+   ++A      M   G  P   T++ L+  + K    D+      E  
Sbjct: 75  YNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 134

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE--MGFSPNVVIYTSLIDGCCKN 223
              C V  ++ ++   + G C+     +A E++  L +  +  SP+ V +++LIDG CK 
Sbjct: 135 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 194

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A  +F  +   G V    TY  L+ GL K    +      E M   GV+P + TY
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 254

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNV-----VTYNTLICGLCKEMRVQEAERLL 338
           + L+  +C   +V E  +L   M  R    NV     VT+N LI G CK    ++A  L 
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALF 314

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           ++M    + P+V+T+  LIDG C AG+ + A  + + + + G  P+VVTYN L+    K+
Sbjct: 315 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 374

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G  + A   + EM   G  P  +TY  L+ +  R+   + A ++ S ++  G+ PD  TY
Sbjct: 375 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 434

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +L+ GL   G  ++A  +   M     +P+   +     G  + GN    + LL  +  
Sbjct: 435 NILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLA 494

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           KG++P+  + SS +  +C+ GK  + + ++ +
Sbjct: 495 KGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 6/275 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPR-----SNTFNSLLIFVIKSCSFDKGWLF 163
           Y  ++DA  K+   D+AL   H M   G  P        TFN L+    K+ +F++    
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 164 FSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F E   K ++ DV +FG LI G C+AG +  A ++L+ +  +G  PNVV Y +L+ G CK
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +G IE A     ++   G V    TY  L+  L +     D  +   +++  G  P   T
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN L+      GK  +   + +EM  +    +  T+     GL +   +     LL  + 
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
             G+ P+  T + ++D  C +G+ D    +  + +
Sbjct: 494 AKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 270/545 (49%), Gaps = 33/545 (6%)

Query: 28  AFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
               F W+ ++  L +  +  S +L  L    +S  ++  ++ +   +     + S    
Sbjct: 61  VLRFFKWSQKEYRLSYGLEPTSKVLHFL---ANSKRYSKVRSFLDSFVKNEKHTVSSVFH 117

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           SLL            P   + + + ++ A++K+     A   F +  D G +    + N 
Sbjct: 118 SLLL-------DGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNP 170

Query: 147 LLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           LL  ++K     D  +++    + ++  ++ +F I I G C AG LNKA + +  ++  G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 206 FSPNVVIYTSLIDGCCKNGD---IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            SPNVV Y +L+DG CK G    + +A+   +++    +   + T+  LI G  K+    
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              + +E+MQ  G+ P++ TYN LI+  CN GK+ E   L+D+M    +  N+VTYN LI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G CK+  ++EA ++ D +    + PNVIT+N +ID +C  G  ++ F L + +   G  
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+V TYN LI    +  + + A +L+ EME +G+    VTY ILID   ++D    A ++
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + M   G  P+  TY  L+ G CM+G +K A  +   M + + +PN V YN++I GYCK
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS- 561
                 A  LL EM EKGL PN  +Y                +++  +ML+ G  P +  
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTY----------------DIVRLEMLEKGFSPDIEG 574

Query: 562 -LYNI 565
            LYNI
Sbjct: 575 HLYNI 579



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 209/383 (54%), Gaps = 3/383 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L+ A+E   + ++ GF  ++     L+    K   I   + +++++ +  +    +T+ 
Sbjct: 145 ELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFN 204

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK---LFDEM 306
           + I GL + G      +  E M+  G+SP++ TYN L+  YC  G   + +K      EM
Sbjct: 205 IFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM 264

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
              ++  N VT+NTLI G CK+  V  A++  ++M+  G+ PN++TYN LI+G C+ G+ 
Sbjct: 265 LANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKL 324

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A  L++++   G  P++VTYN LI  F K    K A+ +  ++ ++ + P+ +T+  +
Sbjct: 325 EEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID++ +   ME+ F + S M   G  P+V TY  LI GLC K +++ A +L N M    L
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           + + V YN++I G CK   S  A +LL EM   GL PN  +Y++ +   C +GK   A  
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           +  +M K   +P+V  YN+L + 
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKG 527



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 3/254 (1%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           + L+    K + +  A     + K  G   ++ + N L+       +      ++ ++  
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                ++ T+N+ I    +AG    A D + +M+  GI+P+ VTY  L+D + +     K
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253

Query: 439 AFEMYSLMQK---SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            ++  + M++   +   P+  T+  LI G C   N+  A K F  M +  L+PN V YN 
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G C  G    A+ L  +M   GL PNI +Y++ I   C+     EA  + + + K  
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373

Query: 556 LKPSVSLYNILYRA 569
           L P+V  +N +  A
Sbjct: 374 LVPNVITFNTMIDA 387


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 253/498 (50%), Gaps = 32/498 (6%)

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           +  IS   TS++F   + +     LF      NP   +  +  I+ + +KS+     L  
Sbjct: 49  INFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSL 108

Query: 129 FHQMLDSGVRPRSNTFN-SLLIFV-----IKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
             +M   G++P  N FN ++LI+      +  C   + +LF  +       LD  S+G L
Sbjct: 109 SQKMEFRGIKP--NLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTL 166

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G+   A ++L +++      N V+Y ++I G CK+  +  A  L+ ++   G+
Sbjct: 167 IHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI 226

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY+ LI G F  G  KD  + + K+ L  + P  YT+N L+  +C + K+ EG  
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F  M  + +  +VVTYN+L+ G C    V  A+ + + M   G++P++ +YN LI+GFC
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 346

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              + DKA  LFN++      P+VVTYN LI   SK+G    A  LV +M +RG+ P+ +
Sbjct: 347 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 406

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  +ID+  ++  ++KA  + +  +  G  P +YTY +LI GLC               
Sbjct: 407 TYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC--------------- 451

Query: 482 WETKLEPNDV---VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
              K+E  D+    YN+MI G+CK+G    AL LL +M +   +PN  +Y  TI  L  +
Sbjct: 452 ---KVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDN 508

Query: 539 GKWPEAEVLLNQMLKLGL 556
            +  +AE L  +M+  GL
Sbjct: 509 NENDKAEKLFREMITRGL 526



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 4/365 (1%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N + Y+S       N D++ A  LF ++           +  ++  L K+          
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEG----KVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           +KM+  G+ P+L+  N LI+ +C  G    ++ + F   D++       + V+Y TLI G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK    + A  LL ++    +  N + YN +I G C     + AF L++++ S G SP+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVTY+ LI  F   G  K A DL  ++    I P   T+ IL+D F +   M++   +++
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           +M K G  PDV TY  L+ G C+   +  A  +FN+M +  + P+   YN++I G+CK  
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              +A+ L  EM+ K ++PN+ +Y+S I  L + G+   A  L++QM   G+ P++  YN
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYN 409

Query: 565 ILYRA 569
            +  A
Sbjct: 410 SIIDA 414



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 186/381 (48%), Gaps = 4/381 (1%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D++ A  + N+L     +P    +  ++    K+        L +K+   G+        
Sbjct: 66  DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCN 125

Query: 250 VLICGLFKNGLQ----KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +LI    + GL        F F++K+   G      +Y  LIH  C  G+      L   
Sbjct: 126 ILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 185

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +  + V  N V YNT+I G+CK+  V +A  L  +M   GISPNV+TY+ LI GF   G+
Sbjct: 186 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 245

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A  LFN++      P   T+N+L+  F K    K    +   M ++GI P  VTY  
Sbjct: 246 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 305

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+D +    ++  A  +++ M + G +PD+ +Y +LI+G C    + +A  LFN M    
Sbjct: 306 LMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKN 365

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + PN V YN +I G  K G    AL+L+ +M+++G+ PNI +Y+S I  L +  +  +A 
Sbjct: 366 IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAI 425

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L+ +    G++PS+  Y IL
Sbjct: 426 ALITKFKDQGIQPSMYTYTIL 446



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 23/338 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFS 165
           +Y ++I    K +  + A   + +M+  G+ P   T+++L+   FV+     D   LF  
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK-DAIDLFNK 255

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                ++ D Y+F IL+ G C+   + +   V   + + G  P+VV Y SL+DG C   +
Sbjct: 256 IILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE 315

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  AK +F  + + G+     +Y +LI G  K          + +M    + P++ TYN 
Sbjct: 316 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 375

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI      G++S   +L D+M  R V  N++TYN++I  L K  +V +A  L+ + K  G
Sbjct: 376 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 435

Query: 346 ISPN--------------------VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           I P+                    V TYN +I GFC  G  D+A  L +++K +   P+ 
Sbjct: 436 IQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNA 495

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           VTY + IR+      +  A  L REM  RG+     +Y
Sbjct: 496 VTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 16/178 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   KS     AL    QM D GV P   T+NS++  + K+   DK     ++ +
Sbjct: 373 YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 432

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++  +Y++ ILI G C+                 G+   V  Y  +I G CK G  +
Sbjct: 433 DQGIQPSMYTYTILIDGLCKVE---------------GYDITVNTYNVMIHGFCKKGLFD 477

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            A  L  K+ +   +    TY + I  L  N       + + +M   G+     +Y C
Sbjct: 478 EALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 247/463 (53%), Gaps = 9/463 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           +S+ V+   L E +    L+    + A+  F  M+ S   P    FN LL  ++K   +D
Sbjct: 43  ASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD 102

Query: 159 KGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              +  S  + K+E+     D+Y+F I+I   C    ++ A  +L ++ ++G+ P+ V  
Sbjct: 103 ---VVISLGK-KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 158

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            SL++G C+   +  A  L  K+ E+G       Y  +I  L K     D F+F+++++ 
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P++ TY  L++  CN  + S+  +L  +M  +++  NV+TY+ L+    K  +V E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A+ L ++M    I P+++TY+ LI+G C     D+A ++F+ + S G    VV+YN LI 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F KA   +    L REM +RG+  + VTY  LI  F ++ D++KA E +S M   G SP
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D++TY +L+ GLC  G +++A  +F  M + +++ + V Y  +I G CK G    A  L 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             ++ KGL P+I +Y++ +  LC  G   E E L  +M + GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 233/467 (49%), Gaps = 19/467 (4%)

Query: 103 VTKSRLYESIID------AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           + KSR + SI+D      A +K +  D  +    +M   G+R    TFN  ++     C 
Sbjct: 76  MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN--IVINCFCCC 133

Query: 157 FDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           F       +     +   E D  + G L+ G C    ++ A  +++++ E+G+ P++V Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            ++ID  CK   +  A   F++I   G+     TYT L+ GL  +    D       M  
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P++ TY+ L+  +   GKV E  +LF+EM    +  ++VTY++LI GLC   R+ E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A ++ D M   G   +V++YN LI+GFC A   +   +LF ++   G   + VTYN LI+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F +AG+   A +   +M+  GI+P   TY IL+     + ++EKA  ++  MQK     
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY  +I G+C  G ++EA  LF S+    L+P+ V Y  M+ G C +G  +    L 
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            +M ++GL+ N  + S        DG    +  L+ +ML  G  PS+
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSL 532



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           LN A ++ + + +    P++V +  L+    K    +    L +K+  LG+    +T+ +
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +I   C  F+  L         KM   G  P   T   L++ +C   +VS+   L D+M 
Sbjct: 126 VINCFCCCFQVSL---ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 ++V YN +I  LCK  RV +A     +++  GI PNV+TY  L++G C++    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RL + +     +P+V+TY+ L+ AF K G    A +L  EM    I P  VTY+ LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +     D +++A +M+ LM   G   DV +Y  LI+G C    +++  KLF  M +  L 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN +I G+ + G+  +A     +M+  G+ P+I +Y+  +G LC +G+  +A V+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
              M K  +   +  Y  + R 
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRG 444



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+++   LF +M       ++V +N L+  + K  +      L  +M++ GI  ++ T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I+ FC   +   A  +  ++   G  P  VT   L+  F +      A  LV +M E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  V Y  +IDS  ++  +  AF+ +  +++ G  P+V TY  L++GLC      +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L + M + K+ PN + Y+ ++  + K G    A  L  EM    + P+I +YSS I  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC   +  EA  + + M+  G    V  YN L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 116/240 (48%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +++++ +A  L   M  +   P+++ +N+L+       + D    L  +++  G    + 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N++I  F       +A  ++ +M + G  P  VT   L++ F R + +  A  +   M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G+ PD+  Y  +I  LC    + +A   F  +    + PN V Y  ++ G C     
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A RLL +M +K + PN+ +YS+ +    ++GK  EA+ L  +M+++ + P +  Y+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 246/469 (52%), Gaps = 1/469 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  Y  +I    ++     A+  F +M +  V P   T+N+++   IK    + G+
Sbjct: 59  PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 118

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               +  C  ++ +  ++ +L+ G C AG + +   +L+++      P+   Y+ L DG 
Sbjct: 119 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 178

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +NGD +    LF K  + G+    +T ++L+ GL K+G      E  + +   G+ P+ 
Sbjct: 179 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             YN LI+ YC  G++   F  F +M+ R +  + +TYN LI GLCK  R+  A+ LL +
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G++P V T+N LID +   G+ +K F + ++++ NG  P+VV+Y  ++ AF K G 
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ +M  + + P+   Y  +ID++V     ++AF +   M+ +G SP + TY +
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + EA ++ NS+   +L P+ V YN +I   C  GN  +AL L   M++ G
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +   + +Y   I  L   G+  E E L  +M++  + PS +++NI+  A
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 36/447 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           Y ++ID H+K    +       QM+  G++P + T+N LL  + ++              
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160

Query: 156 -------SFDKGWLF--FSEN--------------RCKVELDVYSFGILIKGCCEAGDLN 192
                   F    LF   S N              +  V +  Y+  IL+ G C+ G ++
Sbjct: 161 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 220

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A EVL  L   G  P  VIY +LI+G C+ G++E A   F ++    +     TY  LI
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K     +  +   +MQ NGV+P++ T+N LI  Y   G++ + F +  EM+   + 
Sbjct: 281 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y +++   CK  ++ EA  +LD M    + PN   YN +ID + + G  D+AF L
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KSNG SPS+VTYN+LI+          A +++  +    + P  V+Y  LI +   
Sbjct: 401 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 460

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +++KA ++   M K G    V TY  LI GL   G + E   L+  M +  + P++ +
Sbjct: 461 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 520

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +N+M+  Y K GN  +A  L  EM +K
Sbjct: 521 HNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 190/416 (45%), Gaps = 39/416 (9%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TY 248
           D+ +AF +L      G  P+   +   +  C   GD+  A  + R++G  G       +Y
Sbjct: 10  DVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 66

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            V+I G+++ G   D  E +++M    V P+  TYN +I  +   G +  GF+L D+M  
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N +TYN L+ GLC+  R+ E   LLD+M    + P+  TY+ L DG    G++  
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF +   NG +    T ++L+    K G   +A ++++ +   G+ P+ V Y  LI+
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + ++ ++E AF  +  M+     PD  TY  LI+GLC    +  A  L   M +  + P
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 306

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
               +N +I  Y + G   +   +L EM E GL PN+ SY S +   C++GK PEA  +L
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366

Query: 549 NQMLKL-----------------------------------GLKPSVSLYNILYRA 569
           + M                                      G+ PS+  YN+L + 
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 1/308 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y ++I+ + ++   + A   F QM    ++P   T+N+L+  + K+        L    
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V   V +F  LI      G L K F VL++++E G  PNVV Y S+++  CKNG I
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   +    ++     Y  +I    ++G     F   EKM+ NG+SPS+ TYN L
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   CN+ ++SE  ++ + + +  +  + V+YNTLI   C    + +A  L  +M   GI
Sbjct: 420 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              V TY++LI G   AG  ++   L+ ++  N   PS   +N+++ A+SK GN   A D
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 539

Query: 407 LVREMEER 414
           L +EM ++
Sbjct: 540 LRKEMLQK 547



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 5/240 (2%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTY 388
           R  +  R    +  AG  P+   +NK +     AG+  +A  +  ++  +G   P+  +Y
Sbjct: 7   RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 66

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           NV+I    +AG    A ++  EM ER + P+ +TY  +ID  ++  D+E  F +   M  
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+  TY VL+ GLC  G M E S L + M   K+ P+   Y+++  G  + G+S  
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186

Query: 509 ALRLLGEMNEKGLVPNIASYSSTI--GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L L G+  + G+   I  Y+ +I    LC+DGK   AE +L  ++  GL P+  +YN L
Sbjct: 187 MLSLFGKYLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 34/204 (16%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +++Y +IIDA+++   +DQA     +M  +G+ P   T+N                    
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN-------------------- 417

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                         +LIKG C    +++A E++N L      P+ V Y +LI  CC  G+
Sbjct: 418 --------------LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 463

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I++A  L +++ + G+ +T  TY  LI GL   G   +    Y+KM  N V PS   +N 
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHR 309
           ++  Y   G   +   L  EM  +
Sbjct: 524 MVEAYSKYGNEIKAEDLRKEMLQK 547


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 242/462 (52%), Gaps = 7/462 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I+   + R    A     +++  G  P +  FN+LL  +   C   +           V
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR---MV 185

Query: 172 EL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           E+     + +   L+ G C  G ++ A  +++++ E GF PN V Y  +++  CK+G   
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L RK+ E  +      Y+++I GL K+G   + F  + +M++ G    + TYN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +CN G+  +G KL  +M  R+++ NVVT++ LI    KE +++EA++LL +M   GI+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN ITYN LIDGFC     ++A ++ + + S G  P ++T+N+LI  + KA       +L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM  RG+  + VTY  L+  F +S  +E A +++  M      PD+ +Y +L+ GLC 
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +++A ++F  + ++K+E +  +Y ++I G C       A  L   +  KG+  +  +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  I  LC+     +A++L  +M + G  P    YNIL RA
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 265/524 (50%), Gaps = 5/524 (0%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY 109
           ++R+++ ++SS +    Q  +L+  + RI   +  P  LL    + F + S+   ++  Y
Sbjct: 1   MVRMMIRRLSSQASRFVQPRLLETGTLRIALIN-CPNELLFCCERGFSTFSD---RNLSY 56

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
              + + L    +D A+  F  M+ S   P    FN L   + K+  ++       +   
Sbjct: 57  RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116

Query: 170 K-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           K +   +Y+  I+I   C    L+ AF  + ++ ++G+ P+ VI+ +L++G C    +  
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  ++ E+G   T  T   L+ GL  NG   D     ++M   G  P+  TY  +++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G+ +   +L  +M  R +  + V Y+ +I GLCK+  +  A  L ++M++ G   
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ITYN LI GFC+AG  D   +L   +     SP+VVT++VLI +F K G  + A  L+
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           +EM +RGI P+ +TY  LID F + + +E+A +M  LM   G  PD+ T+ +LI+G C  
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             + +  +LF  M    +  N V YN ++ G+C+ G    A +L  EM  + + P+I SY
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
              +  LC +G+  +A  +  ++ K  ++  + +Y I+     N
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 233/446 (52%), Gaps = 2/446 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDV 175
           L+ R+S +AL    +M++ G +P   T N+L+    +     D   L         + + 
Sbjct: 170 LECRVS-EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++G ++   C++G    A E+L ++EE     + V Y+ +IDG CK+G ++ A  LF +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G  A   TY  LI G    G   DG +    M    +SP++ T++ LI  +  EGK
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E  +L  EM  R +A N +TYN+LI G CKE R++EA +++D M   G  P+++T+N 
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C A   D    LF ++   G   + VTYN L++ F ++G  ++A  L +EM  R 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  V+Y IL+D    + ++EKA E++  ++KS    D+  Y ++IHG+C    + +A 
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF S+    ++ +   YN+MI   C++ +  +A  L  +M E+G  P+  +Y+  I   
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVS 561
             D     A  L+ +M   G    VS
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVS 614



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 215/421 (51%), Gaps = 4/421 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
           L  ++SD A+    +M+++G +P   T+  +L  + KS   +     L   E R  ++LD
Sbjct: 205 LNGKVSD-AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLD 262

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
              + I+I G C+ G L+ AF + N++E  GF  +++ Y +LI G C  G  +    L R
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            + +  +     T++VLI    K G  ++  +  ++M   G++P+  TYN LI  +C E 
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ E  ++ D M  +    +++T+N LI G CK  R+ +   L  +M + G+  N +TYN
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ GFC +G+ + A +LF ++ S    P +V+Y +L+      G  + A ++  ++E+ 
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +      Y I+I     +  ++ A++++  +   G   D   Y ++I  LC K ++ +A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E    P+++ YN++I  +  + ++  A  L+ EM   G   ++++    I +
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622

Query: 535 L 535
           L
Sbjct: 623 L 623



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 38/378 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  IID   K    D A   F++M   G +    T+N+L+     +  +D G     +  
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + K+  +V +F +LI    + G L +A ++L ++ + G +PN + Y SLIDG CK   +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +   G      T+ +LI G  K     DG E + +M L GV  +  TYN L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  GK+    KLF EM  R V  ++V+Y  L+ GLC    +++A  +  +++ + + 
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLF---------------------------------- 373
            ++  Y  +I G C+A + D A+ LF                                  
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 374 -NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++   G +P  +TYN+LIRA     ++  A++L+ EM+  G  P++V+   ++ + + 
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLS 624

Query: 433 SDDMEKAF-EMYSLMQKS 449
           S +++K+F +M S  + S
Sbjct: 625 SGELDKSFLDMLSTTRAS 642



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 5/299 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT S L +S +    K R +DQ L    +M+  G+ P + T+NSL+    K    +
Sbjct: 330 SPNVVTFSVLIDSFVKEG-KLREADQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +          K  + D+ +F ILI G C+A  ++   E+  ++   G   N V Y +L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C++G +E AK LF+++    +     +Y +L+ GL  NG  +   E + K++ + + 
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
             +  Y  +IH  CN  KV + + LF  +  + V  +   YN +I  LC++  + +A+ L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
             +M   G +P+ +TYN LI       +   A  L  ++KS+G    V T  ++I   S
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 246/469 (52%), Gaps = 1/469 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  Y  +I    ++     A+  F +M +  V P   T+N+++   IK    + G+
Sbjct: 11  PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 70

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               +  C  ++ +  ++ +L+ G C AG + +   +L+++      P+   Y+ L DG 
Sbjct: 71  RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 130

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +NGD +    LF K  + G+    +T ++L+ GL K+G      E  + +   G+ P+ 
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             YN LI+ YC  G++   F  F +M+ R +  + +TYN LI GLCK  R+  A+ LL +
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G++P V T+N LID +   G+ +K F + ++++ NG  P+VV+Y  ++ AF K G 
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ +M  + + P+   Y  +ID++V     ++AF +   M+ +G SP + TY +
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + EA ++ NS+   +L P+ V YN +I   C  GN  +AL L   M++ G
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +   + +Y   I  L   G+  E E L  +M++  + PS +++NI+  A
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 36/447 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           Y ++ID H+K    +       QM+  G++P + T+N LL  + ++              
Sbjct: 53  YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 112

Query: 156 -------SFDKGWLF--FSEN--------------RCKVELDVYSFGILIKGCCEAGDLN 192
                   F    LF   S N              +  V +  Y+  IL+ G C+ G ++
Sbjct: 113 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 172

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A EVL  L   G  P  VIY +LI+G C+ G++E A   F ++    +     TY  LI
Sbjct: 173 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 232

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K     +  +   +MQ NGV+P++ T+N LI  Y   G++ + F +  EM+   + 
Sbjct: 233 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y +++   CK  ++ EA  +LD M    + PN   YN +ID + + G  D+AF L
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KSNG SPS+VTYN+LI+          A +++  +    + P  V+Y  LI +   
Sbjct: 353 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 412

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +++KA ++   M K G    V TY  LI GL   G + E   L+  M +  + P++ +
Sbjct: 413 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +N+M+  Y K GN  +A  L  EM +K
Sbjct: 473 HNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 173/374 (46%), Gaps = 36/374 (9%)

Query: 232 LFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           + R++G  G       +Y V+I G+++ G   D  E +++M    V P+  TYN +I  +
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G +  GF+L D+M    +  N +TYN L+ GLC+  R+ E   LLD+M    + P+ 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY+ L DG    G++     LF +   NG +    T ++L+    K G   +A ++++ 
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +   G+ P+ V Y  LI+ + ++ ++E AF  +  M+     PD  TY  LI+GLC    
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +  A  L   M +  + P    +N +I  Y + G   +   +L EM E GL PN+ SY S
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKL-----------------------------------G 555
            +   C++GK PEA  +L+ M                                      G
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360

Query: 556 LKPSVSLYNILYRA 569
           + PS+  YN+L + 
Sbjct: 361 ISPSIVTYNLLIKG 374



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 1/308 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y ++I+ + ++   + A   F QM    ++P   T+N+L+  + K+        L    
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V   V +F  LI      G L K F VL++++E G  PNVV Y S+++  CKNG I
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   +    ++     Y  +I    ++G     F   EKM+ NG+SPS+ TYN L
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 371

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   CN+ ++SE  ++ + + +  +  + V+YNTLI   C    + +A  L  +M   GI
Sbjct: 372 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              V TY++LI G   AG  ++   L+ ++  N   PS   +N+++ A+SK GN   A D
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 491

Query: 407 LVREMEER 414
           L +EM ++
Sbjct: 492 LRKEMLQK 499



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 34/204 (16%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +++Y +IIDA+++   +DQA     +M  +G+ P   T+N                    
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN-------------------- 369

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                         +LIKG C    +++A E++N L      P+ V Y +LI  CC  G+
Sbjct: 370 --------------LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 415

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I++A  L +++ + G+ +T  TY  LI GL   G   +    Y+KM  N V PS   +N 
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 475

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHR 309
           ++  Y   G   +   L  EM  +
Sbjct: 476 MVEAYSKYGNEIKAEDLRKEMLQK 499


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 212/393 (53%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G C  G + +A E+ N++   G  PNV+ Y ++I+G CK G+   A  +F+K+
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G      TY  +I  L K+ L  D  EF  +M   G+ P+++TYNC++H +C  G++
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +E  +LF EM  R+V  + VT   L+ GLCKE  V EA  + + M   G+ PN+ TYN L
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG+C     ++A ++F  +   G +P V +YN+LI  F K+     A  L+ EM  + +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTY+ L+    +    ++A  ++  M   G  P++ TY +L+ G C  G++ EA K
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L  SM E KLEPN V + ++I G    G    A  L  ++   G+ P I +Y+  I  L 
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++G   EA  L  +M   G  P+   YN++ + 
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 552



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 217/448 (48%), Gaps = 1/448 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++M+    RP    F   L    K   +       ++ +   V  +VYS  +L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ A  +L ++ ++G  P    + +LI+G C  G I+ A  LF ++   G 
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +Y  +I GL K G      + ++KM+ NG  P + TYN +I   C +  V++  +
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
              EM  R +  NV TYN ++ G C   ++ EA RL  +M    + P+ +T   L+DG C
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  +F  +   G  P++ TYN L+  +        A  +   M  +G  P   
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y ILI+ F +S  M++A  + + M     +PD  TY  L+ GLC  G  KEA  +F  M
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               L PN V Y++++ G+CK G+   AL+LL  M EK L PNI  ++  I  +   GK 
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             A+ L +++   G++P++  Y ++ + 
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKG 517



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 237/450 (52%), Gaps = 7/450 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++F    +P   +  + ++I+         +A+  F++M+  G  P   ++N+++  +
Sbjct: 146 LGKMFKLGIHPTAST--FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGL 203

Query: 152 IKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            K+ +       F    +N CK   DV ++  +I   C+   +N A E L+++ + G  P
Sbjct: 204 CKTGNTSMAVDVFKKMEQNGCKP--DVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP 261

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           NV  Y  ++ G C  G +  A  LF+++    ++    T T+L+ GL K G+  +    +
Sbjct: 262 NVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E M   GV P++ TYN L+  YC +  ++E  K+F+ M  +  A  V +YN LI G CK 
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ EA+ LL +M    ++P+ +TY+ L+ G C  G   +A  +F ++ S G  P++VTY
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           ++L+  F K G+   A  L++ M+E+ + P+ V +TILI+    +  +E A E++S +  
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P + TY V+I GL  +G   EA  LF  M +    PN   YN+MI G+ +  +S  
Sbjct: 502 DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 561

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           A+RL+ EM  K    N++++   + +  QD
Sbjct: 562 AIRLIDEMVGKRFSANLSTFQMLLDLESQD 591



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A   +  M +    P V  +G  +     K        L N M    +  N    N+
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I   C+  +   A+ +LG+M + G+ P  +++++ I  LC +GK  EA  L N+M++ G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 556 LKPSVSLYNIL 566
            +P+V  YN +
Sbjct: 189 HEPNVISYNTI 199


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 246/469 (52%), Gaps = 1/469 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  Y  +I    ++     A+  F +M +  V P   T+N+++   IK    + G+
Sbjct: 192 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 251

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               +  C  ++ +  ++ +L+ G C AG + +   +L+++      P+   Y+ L DG 
Sbjct: 252 SLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 311

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +NGD +    LF K  + G+    +T ++L+ GL K+G      E  + +   G+ P+ 
Sbjct: 312 SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             YN LI+ YC  G++   F  F +M+ R +  + +TYN LI GLCK  R+  A+ LL +
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G++P V T+N LID +   G+ +K F + ++++ NG  P+VV+Y  ++ AF K G 
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ +M  + + P+   Y  +ID++V     ++AF +   M+ +G SP + TY +
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + EA ++ NS+   +L P+ V YN +I   C  GN  +AL L   M++ G
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +   + +Y   I  L   G+  E E L  +M++  + PS +++NI+  A
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 36/447 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           Y ++ID H+K    +       QM+  G++P + T+N LL  + ++              
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 293

Query: 156 -------SFDKGWLF--FSEN--------------RCKVELDVYSFGILIKGCCEAGDLN 192
                   F    LF   S N              +  V +  Y+  IL+ G C+ G ++
Sbjct: 294 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVS 353

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A EVL  L   G  P  VIY +LI+G C+ G++E A   F ++    +     TY  LI
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 413

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K     +  +   +MQ NGV+P++ T+N LI  Y   G++ + F +  EM+   + 
Sbjct: 414 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 473

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y +++   CK  ++ EA  +LD M    + PN   YN +ID + + G  D+AF L
Sbjct: 474 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 533

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KSNG SPS+VTYN+LI+          A +++  +    + P  V+Y  LI +   
Sbjct: 534 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 593

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +++KA ++   M K G    V TY  LI GL   G + E   L+  M +  + P++ +
Sbjct: 594 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAI 653

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +N+M+  Y K GN  +A  L  EM +K
Sbjct: 654 HNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 189/416 (45%), Gaps = 39/416 (9%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TY 248
           D+ +AF +L      G  P+   +   +  C   GD+  A  + R++G  G       +Y
Sbjct: 143 DVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 199

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            V+I G+++ G   D  E +++M    V P+  TYN +I  +   G +  GF L D+M  
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N +TYN L+ GLC+  R+ E   LLD+M    + P+  TY+ L DG    G++  
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF +   NG +    T ++L+    K G   +A ++++ +   G+ P+ V Y  LI+
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + ++ ++E AF  +  M+     PD  TY  LI+GLC    +  A  L   M +  + P
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 439

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
               +N +I  Y + G   +   +L EM E GL PN+ SY S +   C++GK PEA  +L
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499

Query: 549 NQMLKL-----------------------------------GLKPSVSLYNILYRA 569
           + M                                      G+ PS+  YN+L + 
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 1/308 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y ++I+ + ++   + A   F QM    ++P   T+N+L+  + K+        L    
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V   V +F  LI      G L K F VL++++E G  PNVV Y S+++  CKNG I
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   +    ++     Y  +I    ++G     F   EKM+ NG+SPS+ TYN L
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   CN+ ++SE  ++ + + +  +  + V+YNTLI   C    + +A  L  +M   GI
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              V TY++LI G   AG   +   L+ ++  N   PS   +N+++ A+SK GN   A D
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 672

Query: 407 LVREMEER 414
           L +EM ++
Sbjct: 673 LRKEMLQK 680



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 5/240 (2%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTY 388
           R  +  R    +  AG  P+   +NK +     AG+  +A  +  ++  +G   P+  +Y
Sbjct: 140 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 199

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           NV+I    +AG    A ++  EM ER + P+ +TY  +ID  ++  D+E  F +   M  
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+  TY VL+ GLC  G M E S L + M   K+ P+   Y+++  G  + G+S  
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 509 ALRLLGEMNEKGLVPNIASYSSTI--GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L L G+  + G+   I  Y+ +I    LC+DGK   AE +L  ++  GL P+  +YN L
Sbjct: 320 MLSLFGKSLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 3/204 (1%)

Query: 367 DKAFRLFNQLKSNGQSP--SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           D A RL + L    ++P  S+ + N+L+ A    G           +   G  P    + 
Sbjct: 105 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWN 164

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGF-SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             + + V + D+ +A  M   M + G   P+ ++Y V+I G+   G   +A ++F+ M E
Sbjct: 165 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 224

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + PN + YN MI G+ K G+      L  +M   GL PN  +Y+  +  LC+ G+  E
Sbjct: 225 RAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGE 284

Query: 544 AEVLLNQMLKLGLKPSVSLYNILY 567
              LL++M    + P    Y+IL+
Sbjct: 285 TSALLDEMASQKMVPDGFTYSILF 308



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 34/201 (16%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +++Y +IIDA+++   +DQA     +M  +G+ P   T+N                    
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN-------------------- 550

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                         +LIKG C    +++A E++N L      P+ V Y +LI  CC  G+
Sbjct: 551 --------------LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 596

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I++A  L +++ + G+ +T  TY  LI GL   G   +    Y+KM  N V PS   +N 
Sbjct: 597 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656

Query: 286 LIHEYCNEGKVSEGFKLFDEM 306
           ++  Y   G   +   L  EM
Sbjct: 657 MVEAYSKYGNEIKAEDLRKEM 677


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 217/396 (54%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +   L+ G C +G   +A  +++++ E G  PN V Y  +++  CK+G    A  L 
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           RK+ E  +      Y+++I GL K+G   + F  + +M++ G++ ++ TYN LI  +CN 
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  +G KL  +M  R++  NVVT++ LI    KE +++EAE L  +M   GI+P+ ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDGFC     DKA ++ + + S G  P++ T+N+LI  + KA       +L R+M  
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTY  LI  F     +  A E++  M      P++ TY +L+ GLC  G  ++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F  + ++K+E +  +YN++I G C       A  L   +  KG+ P + +Y+  IG
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G   EAE+L  +M + G  P    YNIL RA
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 261/525 (49%), Gaps = 7/525 (1%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRIT-SSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
           +++L++ ++SS      Q  +L+  + RI   +     S  C       S  N   + RL
Sbjct: 1   MVKLMIRRLSSQVSKFVQPRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERL 60

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
              ++D       +D A+  F  M+ S   P    F+ L   + K+  +D       +  
Sbjct: 61  RSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  ++Y+  I+I   C    L  AF  + ++ ++G+ PN + +++LI+G C  G + 
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E+G      T   L+ GL  +G + +     +KM   G  P+  TY  ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G+ +   +L  +M  R +  + V Y+ +I GLCK   +  A  L ++M+M GI+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N+ITYN LI GFC+AG  D   +L   +     +P+VVT++VLI +F K G  + A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM  RGI P  +TYT LID F + + ++KA +M  LM   G  P++ T+ +LI+G C 
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + +  +LF  M    +  + V YN +I G+C+ G    A  L  EM  + + PNI +
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           Y   +  LC +G+  +A  +  ++ K  ++  + +YNI+     N
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 239/464 (51%), Gaps = 9/464 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N +T S L   +    L+ R+S +AL    +M++ G +P   T N+L+  +  S    + 
Sbjct: 157 NTITFSTLINGLC---LEGRVS-EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212

Query: 161 WLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            L      E  C+   +  ++G ++   C++G    A E+L ++EE     + V Y+ +I
Sbjct: 213 MLLIDKMVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK+G ++ A  LF ++   G+     TY +LI G    G   DG +    M    ++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ T++ LI  +  EGK+ E  +L  EM HR +A + +TY +LI G CKE  + +A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           +D M   G  PN+ T+N LI+G+C A   D    LF ++   G     VTYN LI+ F +
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G   +A +L +EM  R + P+ VTY IL+D    + + EKA E++  ++KS    D+  
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y ++IHG+C    + +A  LF S+    ++P    YN+MI G CK+G    A  L  +M 
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           E G  P+  +Y+  I     DG   ++  L+ ++ + G     S
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 217/423 (51%), Gaps = 4/423 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
           +A+    +M++ G +P + T+  +L  + KS   +     L   E R  ++LD   + I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSII 269

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G L+ AF + N++E  G + N++ Y  LI G C  G  +    L R + +  +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T++VLI    K G  ++  E +++M   G++P   TY  LI  +C E  + +  +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M  +    N+ T+N LI G CK  R+ +   L  +M + G+  + +TYN LI GFC
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           + G+ + A  LF ++ S    P++VTY +L+      G S+ A ++  ++E+  +     
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y I+I     +  ++ A++++  +   G  P V TY ++I GLC KG + EA  LF  M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            E    P+   YN++I  +  +G++ ++++L+ E+   G   + ++    I +L  DG+ 
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRL 628

Query: 542 PEA 544
            ++
Sbjct: 629 KKS 631



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 1/289 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +ID+ +K     +A     +M+  G+ P + T+ SL+    K    DK         
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + ++ +F ILI G C+A  ++   E+  ++   G   + V Y +LI G C+ G + 
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF+++    +     TY +L+ GL  NG  +   E +EK++ + +   +  YN +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  CN  KV + + LF  +  + V   V TYN +I GLCK+  + EAE L  +M+  G +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           P+  TYN LI      G+  K+ +L  +LK  G S    T  ++I   S
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/438 (34%), Positives = 222/438 (50%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++A+     M + G+ P S T N +L   I+S   D     F E   + V  D  SF ++
Sbjct: 187 NEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLM 246

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + GC   G + +A   L+ + + GF P+    T ++   C+NG + RA   FRK+ +LG 
Sbjct: 247 VIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGF 306

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 +T LI GL K G  K  FE  E+M  NG  P++YT+  LI   C  G   + F+
Sbjct: 307 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 366

Query: 302 LFDEMRHREV-ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           LF ++   ++   NV TY ++I G CKE ++  AE L  +MK  G+ PNV TY  LI+G 
Sbjct: 367 LFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 426

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG  D+A+ L N +   G  P++ TYN +I +  K   +  A +L+ +    G+    
Sbjct: 427 CKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADG 486

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILI    +  D+++A   +  M K+GF  D+    +LI   C +  MKE+ +LF  
Sbjct: 487 VTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 546

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           +    L P    Y  MI GYCKEG+   AL+    M   G VP+  +Y S I  LC+   
Sbjct: 547 VVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 606

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA  L   M+  GL P
Sbjct: 607 VDEACKLYEAMIDRGLSP 624



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 229/480 (47%), Gaps = 42/480 (8%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG--WLFFSENRC 169
           +++  ++S L D A   F +M   GV P S++F  ++I   +     +   WL     R 
Sbjct: 211 VLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRG 270

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  D  +  +++   CE G +N+A     ++ ++GF PN++ +TSLIDG CK G I++A
Sbjct: 271 FIP-DNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 329

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIH 288
             +  ++   G     +T+T LI GL K G  +  F  + K+  + +  P+++TY  +I 
Sbjct: 330 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIG 389

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC E K++    LF  M+ + +  NV TY TLI G CK      A  L++ M   G  P
Sbjct: 390 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY-------------------- 388
           N+ TYN +ID  C      +A+ L N+  S G     VTY                    
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFF 509

Query: 389 ---------------NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
                          N+LI AF +    K +  L + +   G+ P++ TYT +I  + + 
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKE 569

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D + A + +  M++ G  PD +TYG LI GLC K  + EA KL+ +M +  L P +V  
Sbjct: 570 GDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 629

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             + + YCK  +S  A+ +L  +++K  +  +    + +  LC + K   A +   ++L+
Sbjct: 630 VTLAYEYCKRNDSASAMIVLEPLDKKLWIRTV---RTLVRKLCSEKKVGVAALFFQKLLE 686



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 200/384 (52%), Gaps = 1/384 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++   E G LN+A  ++  ++  G SP+ +    +++   ++G I+ A+ +F ++   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     ++ +++ G F++G  ++   +   M   G  P   T   ++   C  G V+   
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
             F +M       N++ + +LI GLCK+  +++A  +L++M   G  PNV T+  LIDG 
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 361 CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           C  G T+KAFRLF +L +S+   P+V TY  +I  + K      A  L   M+E+G+ P+
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TYT LI+   ++ + ++A+E+ +LM   GF P++YTY  +I  LC K    EA +L N
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             +   LE + V Y ++I   CK+ +  +AL     MN+ G   ++   +  I   C+  
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLY 563
           K  E+E L   ++ LGL P+   Y
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETY 559



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 36/295 (12%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           MQ  G+SPS  T NC++      G +     +FDEM  R V  +  ++  ++ G  ++ +
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +QEA+R L  M   G  P+  T   ++   C+ G  ++A   F                 
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYF----------------- 298

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                             R+M + G  P+ + +T LID   +   +++AFEM   M ++G
Sbjct: 299 ------------------RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 340

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL-EPNDVVYNMMIFGYCKEGNSYRA 509
           + P+VYT+  LI GLC +G  ++A +LF  +  + + +PN   Y  MI GYCKE    RA
Sbjct: 341 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRA 400

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             L   M E+GL PN+ +Y++ I   C+ G +  A  L+N M   G +P++  YN
Sbjct: 401 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYN 455



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 34/306 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  + K    ++A   F +M + G+ P  NT+ +                      
Sbjct: 384 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT---------------------- 421

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                       LI G C+AG+ ++A+E++N +++ GF PN+  Y ++ID  CK      
Sbjct: 422 ------------LINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPE 469

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  K    GL A   TYT+LI    K    K    F+ +M   G    +   N LI 
Sbjct: 470 AYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIA 529

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C + K+ E  +LF  +    +     TY ++I G CKE     A +    MK  G  P
Sbjct: 530 AFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVP 589

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +  TY  LI G C     D+A +L+  +   G SP  VT   L   + K  +S  A  ++
Sbjct: 590 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVL 649

Query: 409 REMEER 414
             ++++
Sbjct: 650 EPLDKK 655



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 93/176 (52%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++R FS+ G    A  +V +M+ +G++PS +T   +++  + S  ++ A  ++  M   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  ++ +++ G    G ++EA +  + M +    P++    +++   C+ G   RA+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +M + G  PN+ +++S I  LC+ G   +A  +L +M++ G KP+V  +  L
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 250/473 (52%), Gaps = 1/473 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S   P   +  Y  +I    +S     AL  F +M+D GV P   T+N+++   +K    
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 245

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           + G+    +      + ++ ++ +L+ G C AG +++   +++++      P+   Y+ L
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 305

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            DG  + G+      LF +  + G++   +T ++L+ GL K+G      +  E +   G+
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P+   YN LI+ YC    +   F +F++M+ R +  + +TYN LI GLCK   V +AE 
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+ +M+ +G+ P+V T+N LID +  AG+ +K F + + ++  G    V+++  +++AF 
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G    A  ++ +M  + + P+   Y  +ID+++ S D E+AF +   M+ SG S  + 
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 545

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +L+ GLC    + EA +L  ++    L P+ V YN +I   C +G++ +AL LL EM
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N+ G+ P + +Y + +  L   G+  + E L  QML   ++PS S+Y I+  A
Sbjct: 606 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 221/450 (49%), Gaps = 36/450 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--------- 159
           Y ++ID H+K    +       QML  G +P   T+N LL  + ++   D+         
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA 291

Query: 160 -------GWLF-------------------FSENRCK-VELDVYSFGILIKGCCEAGDLN 192
                  G+ +                   F+E+  K V L  Y+  IL+ G C+ G + 
Sbjct: 292 SHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 351

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA +VL  L   G  P  VIY +LI+G C+  D+  A  +F ++    +     TY  LI
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K  +     +   +M+ +GV PS+ T+N LI  Y   G++ + F +  +M+ + + 
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+++ +++   CK  ++ EA  +LD M    ++PN   YN +ID + ++G+T++AF L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 531

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++K++G S S+VTYN+L++   ++     A +L+  +  +G+ P  V+Y  +I +   
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D +KA E+   M K G  P + TY  L+  L   G + +   L+  M    +EP+  +
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           Y +M+  Y +  N  +   L  EM+EKG+ 
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIA 681



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           +CN++  + L  G   ++R          +  AG  P+   +NK++     AG+ D A  
Sbjct: 124 SCNLLLESLLFVGRHADVRAA-----FGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 372 LFNQL-KSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           +  ++ +S G   P   +YNV+I    ++G    A  +  EM + G+ P+ +TY  +ID 
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            V+  D+E  F +   M   G  P++ TY VL+ GLC  G M E   L + M    + P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y+++  G  + G S   L L  E  +KG++    + S  +  LC+DGK  +AE +L 
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 550 QMLKLGLKPSVSLYNIL 566
            ++  GL P+  +YN L
Sbjct: 359 MLVHTGLVPTTVIYNTL 375


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 176/612 (28%), Positives = 283/612 (46%), Gaps = 76/612 (12%)

Query: 25  PLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSH-------------------- 63
           P  A + F W A R G +HT  S + +L LL  + +   +                    
Sbjct: 70  PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129

Query: 64  AAAQTLILKIISGRITSS----SFTPRSLLCH---------LTQLFPSSSNPVTKSRLYE 110
           A A   I +  S R+  S    +F  RSL             +QL      P T +  Y 
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVT--YN 187

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRC 169
           ++I ++ K      A  YF  +L+ G+ P + T N+L++   ++    K  WLF      
Sbjct: 188 TMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 247

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             + + YS+ ILI+G C+A  + KA  +   ++  G SPNV  +T LI G CK+G +  A
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           ++LF  + + G+V +  TY  +I G  K G   D  +  E M+ NG  P  +TYN LI+ 
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC----------------------- 326
            C++ K  E  +L +          VVT+  LI G C                       
Sbjct: 368 LCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426

Query: 327 ------------KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                       K+ R++EA+ LL+++   G+ PNVITY  +IDG+C +G+ D A  +  
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            ++ +G  P+  TYN L+    K      A  L+ +M++ GI P+ +TYT L+       
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D + AF ++ +M+++G  PD + Y VL   LC  G  +EA   ++ +    +    V Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYT 603

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G+ K GN+  A  L+  M ++G  P+  +YS  +  LC+  +  EA  +L+QM   
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 555 GLKPSVSLYNIL 566
           G+K ++  Y IL
Sbjct: 664 GIKCTIFAYTIL 675



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 221/509 (43%), Gaps = 88/509 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SIID + KS   D AL     M   G +P + T+NSL+  ++K    DK         
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK----DK--------- 511

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                                 L+KA  +L ++++ G  PNV+ YT+L+ G C   D + 
Sbjct: 512 ---------------------KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  + + GL   +H Y VL   L K G  ++ + F  +    GV+ +   Y  LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLID 607

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G       L + M       +  TY+ L+  LCK+ R+ EA  +LDQM + GI  
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +  Y  LID     G+ D A R++N++ S+G  PS  TY V I ++ K G  + A DL+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 409 REMEERGITPSEVTYTILID---------------------------------------- 428
            +ME  G+ P  VTY ILID                                        
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787

Query: 429 --SFVRSDD---------MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
             ++VRS D         ++  +++   M K G +P V TY  LI G C  G ++EA  L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            + M    L PN+ +Y ++I   C      +AL  +  M+E G  P + SY   +  LC 
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G + + + L   +L+LG       + IL
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 225/506 (44%), Gaps = 63/506 (12%)

Query: 121 LSDQALFYFHQMLDSGVR----PRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVEL 173
           L DQ      ++L++ V+    P   TF +L+     +  FD      ++   ++CK++L
Sbjct: 368 LCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            V  FG LI    +   L +A E+LN++   G  PNV+ YTS+IDG CK+G ++ A  + 
Sbjct: 428 QV--FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + +   G      TY  L+ GL K+           KMQ +G+ P++ TY  L+   C+E
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                 F+LF+ M    +  +   Y  L   LCK  R +EA   + +    G++   + Y
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYY 602

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDGF  AG TD A  L  ++   G +P   TY+VL+ A  K      A  ++ +M  
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI  +   YTILID  +R    + A  MY+ M  SG  P   TY V I+  C +G +++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL----------------------- 510
           A  L   M    + P+ V YN++I G    G   RA                        
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 511 ----------------------------RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                                       +LL  M + GL P + +YSS I   C+ G+  
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYR 568
           EA +LL+ M   GL P+  +Y +L +
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 223/497 (44%), Gaps = 38/497 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---F 163
           R +  +I    KS     A   F  M  +GV P   T+N++++   K    +        
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             +N C    D +++  LI G C+     +A E+LN   + GF+P VV +T+LI+G C  
Sbjct: 349 MEKNGCHP--DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + A  +  K+           +  LI  L K    K+  E   ++  NG+ P++ TY
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I  YC  GKV    ++   M       N  TYN+L+ GL K+ ++ +A  LL +M+ 
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP-------------------- 383
            GI PNVITY  L+ G CD  + D AFRLF  ++ NG  P                    
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 384 ------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
                       + V Y  LI  FSKAGN+  A+ L+  M + G TP   TY++L+ +  
Sbjct: 586 AYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   + +A  +   M   G    ++ Y +LI  +  +G    A +++N M  +  +P+  
Sbjct: 646 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y + I  YCKEG    A  L+ +M  +G+ P++ +Y+  I      G    A   L +M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 552 LKLGLKPSVSLYNILYR 568
           +    +P+   Y +L +
Sbjct: 766 VGASCEPNYWTYCLLLK 782



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 184/374 (49%), Gaps = 1/374 (0%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V +QL + G  P+ V Y ++I   CK GD+  A   FR + E GL     T   L+ G  
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           + G  +     +  M L G   + Y+Y  LI   C+   V +   LF  M+    + NV 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            +  LI GLCK  RV +A  L D M   G+ P+V+TYN +I G+   G  + A ++   +
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           + NG  P   TYN LI        ++ A +L+    + G TP+ VT+T LI+ +  ++  
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A  M + M  S    D+  +G LI+ L  K  +KEA +L N +    L PN + Y  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I GYCK G    AL +L  M   G  PN  +Y+S +  L +D K  +A  LL +M K G+
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528

Query: 557 KPSVSLYNILYRAK 570
            P+V  Y  L + +
Sbjct: 529 IPNVITYTTLLQGQ 542



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 19/375 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+  +D A     +M+D G  P S T++ LL  + K    ++      +  
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++  ++++ ILI      G  + A  + N++   G  P+   YT  I+  CK G +E
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  K+   G+     TY +LI G    G     F   ++M      P+ +TY CL+
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLL 780

Query: 288 HEYCNEGKVSE-----------------GFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
            ++  +G ++                   ++L + M    +   V TY++LI G CK  R
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA  LLD M   G+SPN   Y  LI   CD    +KA    + +   G  P + +Y +
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+      G+ +    L  ++ E G    EV + IL D  +++  ++  F+M S+M+K  
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY 960

Query: 451 FSPDVYTYGVLIHGL 465
                 TY ++ + +
Sbjct: 961 CCISSQTYALVTNKM 975



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 149/381 (39%), Gaps = 39/381 (10%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLT-QLFPSSSNPVTKSR----------LYESIID 114
           A TLI ++I    T  S+T   LL  L  Q   + + P+               Y  +ID
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFFSENRCK 170
             L+    D A   +++M  SG +P + T+    +F+   C      D   L     R  
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYT---VFINSYCKEGRLEDAEDLILKMEREG 734

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG------ 224
           V  DV ++ ILI GC   G +++AF  L ++      PN   Y  L+    K        
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 225 ----------DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
                     +++    L  ++ + GL  T  TY+ LI G  K G  ++     + M   
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+SP+   Y  LI   C+     +       M        + +Y  L+ GLC E   ++ 
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + L   +   G + + + +  L DG   AG  D  F++ + ++      S  TY ++   
Sbjct: 915 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNK 974

Query: 395 FSKAGNSKMASDLVREMEERG 415
                  +++S LV E+ E  
Sbjct: 975 M-----HEVSSSLVSEVREEA 990


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 230/420 (54%), Gaps = 7/420 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFF 164
           Y ++I+   K    ++A     +ML  G+ P + TFN +L+   +SC  +  W    +F 
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLV---ESCRKEDVWEAERVFN 353

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              +  V  D+ SF  ++      G+L +A     +++ +G  P+ VIYT LI+G C+N 
Sbjct: 354 EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND 413

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D+  A  +  ++ E G V    TY  L+ GL +  +  D  E +++M   GV P  YT  
Sbjct: 414 DVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLT 473

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH YC +G +++   LF+ M  R +  +VVTYNTL+ G CK   +++A+ L   M   
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR 533

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            I P+ I+++ LI+GFC  G   +AFRL++++K  G  P++VT N +I+ + +AGN   A
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKA 593

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           +D +  M   G+ P  +TY  LI+SFV+ ++ ++AF + + M++ G  P++ TY  ++ G
Sbjct: 594 NDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
               G M+EA  + + M +  + P+   Y  +I GY  + N   A R+  EM ++G VP+
Sbjct: 654 FSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 242/477 (50%), Gaps = 24/477 (5%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----------IFVIKSCSFDKG 160
           +++A  K    D    Y  +M + GV     T+N+L+            F +  C   KG
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                     ++  ++++  LI G C+ G   +A  VL+++  +G  PN   +  ++   
Sbjct: 290 ----------LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVES 339

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+  D+  A+ +F ++ + G+V    +++ ++    +NG       ++EKM+  G+ P  
Sbjct: 340 CRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDT 399

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             Y  LI+ YC    VS   K+ +EM  R    +VVTYNTL+ GLC+   + +A+ L  +
Sbjct: 400 VIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE 459

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G+ P+  T   LI G+C  G   KA  LF  +      P VVTYN L+  F K G 
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A +L  +M  R I PS ++++ILI+ F     + +AF ++  M++ G  P + T   
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G    GN+ +A+   N+M    + P+ + YN +I  + KE N  RA  L+  M E+G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           L+PN+ +Y++ +G   + G+  EAE++L++M+  G+ P  S Y  L   Y +K+N++
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 696



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 267/557 (47%), Gaps = 7/557 (1%)

Query: 11  ALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLI 70
            LTL LI ++  L   + + L      Q +  T  + SII  L+   + S     AQ+L+
Sbjct: 65  TLTLTLIPQL--LQKCQNYPLLLPNLIQTIASTSPNPSIIATLIHFLVQSKKLPEAQSLL 122

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           L+II     S      SL+   +    S+ N V    +++ +I  ++++R   +    F 
Sbjct: 123 LRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVV----VFDLLIRTYVQARKLREGSEAFQ 178

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
            +   G     N  N+LL  ++K    D  W  + +  +    ++VY+  I++   C+ G
Sbjct: 179 LLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDG 238

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L+     L+++EE G   ++V Y +L++  C+ G +  A  L   +   GL     TY 
Sbjct: 239 KLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYN 298

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GL K G  +      ++M   G+ P+  T+N ++ E C +  V E  ++F+EM  R
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR 358

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +++++++++    +   +  A    ++MK  G+ P+ + Y  LI+G+C   +   A
Sbjct: 359 GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 418

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++ N++   G    VVTYN L+    +      A +L +EM ERG+ P   T T LI  
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           + +  +M KA  ++  M      PDV TY  L+ G C  G M++A +L+  M   ++ P+
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + ++++I G+C  G    A RL  EM EKG+ P + + ++ I    + G   +A   LN
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598

Query: 550 QMLKLGLKPSVSLYNIL 566
            M+  G+ P    YN L
Sbjct: 599 TMISEGVPPDCITYNTL 615



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 230/453 (50%), Gaps = 3/453 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++A+ +  L  +A      M   G++P   T+N+L+  + K  S+++      E  
Sbjct: 262 YNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE-M 320

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             V L  +  +F  ++   C   D+ +A  V N++ + G  P+++ ++S++    +NG++
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA   F K+  +GLV     YT+LI G  +N       +   +M   G    + TYN L
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C    + +  +LF EM  R V  +  T  TLI G CK+  + +A  L + M +  +
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+V+TYN L+DGFC  GE +KA  L+  + S    PS +++++LI  F   G    A  
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  EM+E+GI P+ VT   +I  ++R+ ++ KA +  + M   G  PD  TY  LI+   
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            + N   A  L N+M E  L PN V YN ++ G+ + G    A  +L +M +KG+ P+ +
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +Y+S I          EA  + ++ML+ G  P 
Sbjct: 681 TYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 169/587 (28%), Positives = 276/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 42  REGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN-RA 100

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P + +  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 101 ASRAQGPRVL------------SPTSHT--YAILMDCCTRAHRPELALAFFGQLLRTGLR 146

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A +
Sbjct: 147 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SPNVV Y ++IDG  K GD+ +A  LF+++ + G+     TY  ++  
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M    V P+ +TYN LI+ Y + G+  E  ++F EMR   +  +
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT + L+  LCK  +++EA  + D M M G +P+V +YN +++G+   G       LF+
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P   T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G +PD Y Y  LI G C  G++ +A +L                 
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P+ VVYNM++ GYC  G   +ALR+   M   
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN+  Y + +   C+ G+  E   L  +ML+ G+KPS  LY+I+
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 613



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 230/460 (50%), Gaps = 3/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   K    ++A   F +M+  G+ P   T+NS++  + K+ + DK   F  +  
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N+ +V  + +++  LI G    G   +A  V  ++      P+VV  + L+   CK G I
Sbjct: 285 NK-RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      +Y +++ G    G   D  + ++ M  +G++P  YT+N L
Sbjct: 344 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 403

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G+
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+   YN LI GFC  G   KA  L +++ +NG    +V ++ +I    K G    A +
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +       G+ P  V Y +L+D +     MEKA  ++  M  +G  P+V  YG L++G C
Sbjct: 524 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 583

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + E   LF  M +  ++P+ ++Y+++I G  + G +  A     EM E G+  +I 
Sbjct: 584 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDIC 643

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  +  L ++  + EA  L  ++  + +K ++   N +
Sbjct: 644 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++ A  K+R  D+A  +  QM++  V P + T+N+L+     +  + +    F E  
Sbjct: 260 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 319

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-----CCK 222
           R  +  DV +  +L+   C+ G + +A +V + +   G +P+V  Y  +++G     C  
Sbjct: 320 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 379

Query: 223 N------------------------------GDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +                              G +++A ++F ++ + G+     TY  +I
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y YNCLI  +C  G + +  +L  E+ +  + 
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  RV +A+ + D     G+ P+ + YN L+DG+C  G+ +KA R+
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM +RGI PS + Y+I+ID    
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFE 619

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + D+ TY +++ GL       EA  LF  +    ++ N + 
Sbjct: 620 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 679

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++   LVP++ +YS  I  L ++G   EAE + + M 
Sbjct: 680 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739

Query: 553 KLGLKPSVSLYNILYR 568
             G +P+  L N + R
Sbjct: 740 NAGCEPNSRLLNHVVR 755



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+ DV ++  +I   C 
Sbjct: 385 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G +P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 445 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 504

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++ +I  L K G   D    ++     G+ P    YN L+  YC  GK+ +  ++FD M 
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  NVV Y TL+ G CK  R+ E   L  +M   GI P+ I Y+ +IDG  +AG T 
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G +  + TYN+++R   K      A  L +E+    +  + +T   +I
Sbjct: 625 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 684

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   ++  +E+A ++++ + +S   P V TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 685 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           PN  + N ++    K+    RA   L +++E+
Sbjct: 745 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 209/444 (47%), Gaps = 3/444 (0%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFH 130
           + S  I  + +  +  L  +T LF            Y    +I A+    + D+A+  F+
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C  G
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 481

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA E+++++   G   ++V ++S+I+  CK G +  A+ +F     +GL      Y 
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 541

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G    G  +     ++ M   G+ P++  Y  L++ YC  G++ EG  LF EM  R
Sbjct: 542 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQR 601

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  + + Y+ +I GL +  R   A+    +M  +GI+ ++ TYN ++ G       D+A
Sbjct: 602 GIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF +L++     +++T N +I    +    + A DL   +    + PS VTY+I+I +
Sbjct: 662 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 721

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++   +E+A +M+S MQ +G  P+      ++  L  K  +  A    + + E      
Sbjct: 722 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 781

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
            +   +++  +  +G     +R L
Sbjct: 782 HLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  N++  N L+ G C+  R  EA
Sbjct: 110 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 168

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP+VV YN +
Sbjct: 169 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 228

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY  ++ +  ++  M+KA      M     
Sbjct: 229 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 288

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ +TY  LI+G    G  KEA ++F  M    + P+ V  +M++   CK G    A  
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P    +N+L +A  
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408

Query: 572 N 572
           N
Sbjct: 409 N 409


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 247/463 (53%), Gaps = 9/463 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           +S+ V+   L E +    L+    + A+  F  M+ S   P    FN LL  ++K   +D
Sbjct: 43  ASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD 102

Query: 159 KGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              +  S  + K+E+     D+Y+F I+I   C    ++ A  +L ++ ++G+ P+ V  
Sbjct: 103 ---VVISLGK-KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 158

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            SL++G C+   +  A  L  K+ E+G       Y  +I  L K     D F+F+++++ 
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P++ TY  L++  CN  + S+  +L  +M  +++  NV+TY+ L+    K  +V E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A+ L ++M    I P+++TY+ L++G C     D+A ++F+ + S G    VV+YN LI 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F KA   +    L REM +RG+  + VTY  LI  F ++ D++KA E +S M   G SP
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D++TY +L+ GLC  G +++A  +F  M + +++ + V Y  +I G CK G    A  L 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             ++ KGL P+I +Y++ +  LC  G   E E L  +M + GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 233/467 (49%), Gaps = 19/467 (4%)

Query: 103 VTKSRLYESIID------AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           + KSR + SI+D      A +K +  D  +    +M   G+R    TFN  ++     C 
Sbjct: 76  MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN--IVINCFCCC 133

Query: 157 FDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           F       +     +   E D  + G L+ G C    ++ A  +++++ E+G+ P++V Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            ++ID  CK   +  A   F++I   G+     TYT L+ GL  +    D       M  
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P++ TY+ L+  +   GKV E  +LF+EM    +  ++VTY++L+ GLC   R+ E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDE 313

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A ++ D M   G   +V++YN LI+GFC A   +   +LF ++   G   + VTYN LI+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F +AG+   A +   +M+  GI+P   TY IL+     + ++EKA  ++  MQK     
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY  +I G+C  G ++EA  LF S+    L+P+ V Y  M+ G C +G  +    L 
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            +M ++GL+ N  + S        DG    +  L+ +ML  G  PS+
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSL 532



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           LN A ++ + + +    P++V +  L+    K    +    L +K+  LG+    +T+ +
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +I   C  F+  L         KM   G  P   T   L++ +C   +VS+   L D+M 
Sbjct: 126 VINCFCCCFQVSL---ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 ++V YN +I  LCK  RV +A     +++  GI PNV+TY  L++G C++    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RL + +     +P+V+TY+ L+ AF K G    A +L  EM    I P  VTY+ L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +     D +++A +M+ LM   G   DV +Y  LI+G C    +++  KLF  M +  L 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN +I G+ + G+  +A     +M+  G+ P+I +Y+  +G LC +G+  +A V+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
              M K  +   +  Y  + R 
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRG 444



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 131/272 (48%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+++   LF +M       ++V +N L+  + K  +      L  +M++ GI  ++ T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I+ FC   +   A  +  ++   G  P  VT   L+  F +      A  LV +M E 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  V Y  +IDS  ++  +  AF+ +  +++ G  P+V TY  L++GLC      +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L + M + K+ PN + Y+ ++  + K G    A  L  EM    + P+I +YSS +  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC   +  EA  + + M+  G    V  YN L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 116/240 (48%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +++++ +A  L   M  +   P+++ +N+L+       + D    L  +++  G    + 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N++I  F       +A  ++ +M + G  P  VT   L++ F R + +  A  +   M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G+ PD+  Y  +I  LC    + +A   F  +    + PN V Y  ++ G C     
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A RLL +M +K + PN+ +YS+ +    ++GK  EA+ L  +M+++ + P +  Y+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 271/546 (49%), Gaps = 16/546 (2%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSK---MSSHSHAAAQTLILKIISGRITSS 81
           PL A   F W  +Q   H  ++  + +  +L+K   M        + + +K+  G +   
Sbjct: 65  PLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVL--- 121

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
                 +L  +        N     +L + +I    K  + ++ L  F++M+++G+ P  
Sbjct: 122 -----DVLVGIG----CGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDV 172

Query: 142 NTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
              N +L +   KS   +   ++    +C++   + +F  ++   C+ G++ +A EVL+ 
Sbjct: 173 RNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDV 232

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           +   G  PN V Y  L++G    G+ +RAK L  ++  LGL  + HTY  LI G  K  +
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEM 292

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            ++  +   +M   G  P++ TYN +++  C  G+VS+  +  D M + ++  ++V+YNT
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI G  +     EA  L  +++   + P+V+TYN LIDG C  G  D A  + + +  +G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P VVT+ +L+R F + GN  MA +L  EM  RG+ P  + YT  I   ++  +  KAF
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            M   M+  GF PD+ TY VLI+GLC  GN  +A++L   M    + P+ V Y  +I  +
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G   +A  +  +M +KG+ P++ +Y+  I      G+   A+   ++M   G+ P+V
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592

Query: 561 SLYNIL 566
             YN L
Sbjct: 593 ITYNAL 598



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 3/406 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK--SCSFDKGWLFFSE 166
           Y  +I    K  + ++A     +ML  G  P   T+N+++  + +    S  + +L    
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMV 339

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   +  D+ S+  LI G    G+  +A  + ++L      P+VV Y +LIDG C+ G++
Sbjct: 340 NE-DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + AK +   + + GL     T+T+L+ G  + G      E +++M   G+ P    Y   
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G  S+ F + +EM+      +++TYN LI GLCK     +A  L+ +M++ GI
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY  +I     +G   KA  +F+ +   G  PSVVTY VLI +++  G    A  
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              EM+++G++P+ +TY  LI    + + M+ A+ +++ M+  G SP+ YTY +LI+   
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENS 638

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
                ++A KL+  M + +++P+   ++ ++    K+      LRL
Sbjct: 639 NLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 145/291 (49%)

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           S+   + LI  +  +  + +   +F +M +  +  +V   N ++  L  +  V E E + 
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             M    I P ++T+N ++D  C  GE  +A  + + ++  G  P+ V+YNVL+   S  
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A +L+ +M   G+  S  TY  LI  F + +  E+A ++   M   G  P V TY
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             +++ LC  G + +A +  + M    L P+ V YN +I+GY + GN   AL L  E+  
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           K LVP++ +Y++ I   C+ G    A+ + + M+K GL P V  + IL R 
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 169/562 (30%), Positives = 276/562 (49%), Gaps = 58/562 (10%)

Query: 13  TLNLISRMAKLPPLKAF-SLFNWASRQGLQHTPQSISIILRLLLSKMSSHS-HAAAQTLI 70
            L+L+ R A LPPL    SL  W SR   +        +  LLL++++SH  H   ++ +
Sbjct: 33  VLHLLLRTAPLPPLPHLVSLARW-SRAHFRAP--LPLPLHALLLARLASHGLHPLLRSEL 89

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
             + + R+ S +   R+L        P+SS+P+    L  ++  A        Q L  + 
Sbjct: 90  HALAAARLHSPASIVRAL--------PASSSPLIADLLVLALASA-------SQPLASYE 134

Query: 131 QMLDSG-----VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKG 184
             L +G      RP + + N LL  ++ +   D     F    R +V  D+++F I+I G
Sbjct: 135 AFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISG 194

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G L KA +V   +   G +P+VV Y ++IDG CK G   RA  ++           
Sbjct: 195 LCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRG---RAGRMY----------- 240

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
            H   +L                 ++M   G+SP+  T+N L++ YC +   +   ++F+
Sbjct: 241 -HVDALL-----------------KEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFE 282

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM+ + +A +VVTY+ L+ GLC E +V+E  +L+D+MK  G+ PN+ T N +++GFC  G
Sbjct: 283 EMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKG 342

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
               A    + ++     P+VVTY +L+  + +    K A  +   M  +G+ P+   Y 
Sbjct: 343 MMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYN 402

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LI  F R+ D      +   M+  G   D+ TY VLI  LC+KG +++A KL + M   
Sbjct: 403 CLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMV 462

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            LEP  + YN +I GYC++GN   A  +   M +     N+ +Y+  I  LC+ GK  E 
Sbjct: 463 GLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEET 522

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             LLN+ML+ GL P+   Y+ +
Sbjct: 523 NELLNEMLEKGLVPNGVTYDTI 544



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 155/295 (52%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS ++ N L+       +V    + F     R V+ ++ T+N +I GLCK  ++++A  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRA 394
              ++  G++P+V+TYN +IDG+C  G   + +    L  ++   G SP+ VT+NVL+  
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K  N+  A  +  EM+++GI  S VTY+ L+        +E+  ++   M+  G  P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + T   +++G C KG M +A    +SM +  ++PN V Y +++ GY +      AL +  
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M+ KG+ PN   Y+  I    ++G W     LL++M   G++  +  YN+L  A
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGA 442


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 173/580 (29%), Positives = 277/580 (47%), Gaps = 40/580 (6%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISG--RITS 80
           P +    FNW   Q G     QS SI+  +L  S++ S + +    +I+    G   I  
Sbjct: 81  PKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILD 140

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           S                 +SN   +  ++E +ID + K  L D+A+ +F     +G    
Sbjct: 141 SLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVG 200

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
               N LL  ++K+   +  W F++      V  DVY++  LI     AG+  +   +L 
Sbjct: 201 LLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLF 260

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++EE G SP++V Y  +I G C+ G+++ A  L + + + GLVA   TY++LI G  K  
Sbjct: 261 EMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQK 320

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +     E+M   G+ P    Y  LI  +  +G   E F++ +EM  R V  N+ TYN
Sbjct: 321 RCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF------------------- 360
            L+ G+CK   +++A+ LL++M M GI P+  TYN +I+G+                   
Sbjct: 381 ALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440

Query: 361 ----------------CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
                           C  G  + A R+F  + S G  P+ V Y  LI+   + G  + A
Sbjct: 441 NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEA 500

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             +++ M+++G+ P  + Y  +I    +S  ME+A +    M + G  P+VYTYG LIHG
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G M+ A + F  M    + PNDVV   +I GYCKEG++  A  +   M  + + P+
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           + +YS+ I  L ++GK   A  LL++ L+ GL P V  YN
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYN 660



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 242/470 (51%), Gaps = 4/470 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K +   +A     +M   G++P    + +L+   ++     + +    E  
Sbjct: 309 YSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML 368

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V+L+++++  L+KG C+ GD+ KA  +LN++  +G  P+   Y ++I+G  K  +  
Sbjct: 369 ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTS 428

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           R K L  ++ +  LV T +T  ++I GL ++G  +D    +E M   GV P+   Y  LI
Sbjct: 429 RVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLI 488

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  EG+  E  ++   M  + V  +V+ YN++I GLCK  +++EA+  L +M   G+ 
Sbjct: 489 KGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV TY  LI G+C +GE   A R F ++   G +P+ V    LI  + K G++  A+ +
Sbjct: 549 PNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSI 608

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M  R + P   TY+ LI   +R+  ++ A E+ S   + G  PDV+TY  +I G C 
Sbjct: 609 FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCK 668

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G + +A +L   M +  + PN + YN +I G CK G   RA  L   +  KGL  N  +
Sbjct: 669 QGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY---RAKNNIE 574
           Y++ I   C+ G   +A  L ++M   G+ P   +Y+ L    R + N E
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 240/449 (53%), Gaps = 6/449 (1%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSENRCKVELDVYS 177
           SRL  +A    +QM    +   S  ++ +L  +IKSC  FD   +  +EN    +  V  
Sbjct: 114 SRLFSRADSVVNQM----IMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVV- 168

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +LI G  + G  ++A       +  GF   ++    L+    K   +E     +  + 
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E  ++   +TYT LI   F+ G  K+G     +M+  G SPSL TYN +I   C  G+V 
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E F+L   M  + +  +V TY+ LI G  K+ R  EA+ +L++M   G+ P  + Y  LI
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           DGF   G++ +AFR+  ++ + G   ++ TYN L++   K G+ + A  L+ EM   GI 
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P   TY  +I+ +++  +  +  ++ S M+KS   P  YT G++I+GLC  G++++AS++
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M    ++PN V+Y  +I G+ +EG    A+R+L  M++KG+ P++  Y+S I  LC+
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             K  EA+  L +M++ GLKP+V  Y  L
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGAL 557



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 255/589 (43%), Gaps = 74/589 (12%)

Query: 54   LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
            LLS+M   +          II+G     S    S +  +        N V    +Y ++I
Sbjct: 433  LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV----IYTTLI 488

Query: 114  DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VE 172
              H++     +A+     M   GV+P    +NS++I + KS   ++   +  E   + ++
Sbjct: 489  KGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK 548

Query: 173  LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
             +VY++G LI G C++G++  A     ++   G +PN V+ T+LIDG CK G    A  +
Sbjct: 549  PNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSI 608

Query: 233  FR-----------------------------------KIGELGLVATQHTYTVLICGLFK 257
            FR                                   +  E GLV    TY  +I G  K
Sbjct: 609  FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCK 668

Query: 258  NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
             G     F+ +E M   G+SP++ TYN LI+  C  G++    +LFD +  + +A N VT
Sbjct: 669  QGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728

Query: 318  YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY------------------------ 353
            Y T+I G CK   + +A RL D+M + G+ P+   Y                        
Sbjct: 729  YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788

Query: 354  ----------NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
                      N L+DGFC +G+  +A +L   +      P  VTY +LI    K G  K 
Sbjct: 789  QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKE 848

Query: 404  ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            A     +M++R + P+ +TYT L+  +  +    + F ++  M      PD  T+ V+I 
Sbjct: 849  AEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908

Query: 464  GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
                +G+  +  KL + M +     +  V +++I   C++ +    L++L ++ E+GL  
Sbjct: 909  AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL 968

Query: 524  NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            ++A+ S+ +    + GK   A  +L  M++    P  +  N L   + +
Sbjct: 969  SLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQD 1017



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 188/393 (47%), Gaps = 5/393 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF IL    C +   ++A  V+NQ+  M       I  SLI  C +              
Sbjct: 103 SFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNN 162

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G+V     + +LI G  K GL  +   F+   + NG    L   N L+ +     K+
Sbjct: 163 NDRGVV-----FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKL 217

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              ++ ++ M    V  +V TY  LI    +    +E +RLL +M+  G SP+++TYN +
Sbjct: 218 ELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C AGE D+AF L   +   G    V TY++LI  F K      A  ++ EM  +G+
Sbjct: 278 IGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGL 337

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  V YT LID F+R  D  +AF +   M   G   +++TY  L+ G+C  G+M++A  
Sbjct: 338 KPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADA 397

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L N M    ++P+   YN MI GY KE N+ R   LL EM +  LVP   +    I  LC
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC 457

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   +A  +   M+ LG+KP+  +Y  L + 
Sbjct: 458 RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 209/442 (47%), Gaps = 2/442 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
            ++ID + K   + +A   F  ML   V P   T+++L+  ++++          SE   K
Sbjct: 591  ALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650

Query: 171  -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             +  DV+++  +I G C+ G + KAF++   + + G SPN++ Y +LI+G CK G+IERA
Sbjct: 651  GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710

Query: 230  KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            + LF  I   GL     TY  +I G  K+G     F  +++M L GV P  + Y+ LI  
Sbjct: 711  RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770

Query: 290  YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
               EG   +   LF E   +  A +  + N L+ G CK  +V EA +LL+ M    + P+
Sbjct: 771  CRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPD 829

Query: 350  VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             +TY  LID  C  G   +A + F  ++     P+ +TY  L+  ++ AG       L  
Sbjct: 830  HVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFD 889

Query: 410  EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            EM  + I P  VT++++ID+ ++  D  K  ++   M K G +       VLI  LC K 
Sbjct: 890  EMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKE 949

Query: 470  NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++ E  K+   + E  L  +    + ++  + K G    A R+L  M     VP+    +
Sbjct: 950  HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELN 1009

Query: 530  STIGVLCQDGKWPEAEVLLNQM 551
              I V         A   L QM
Sbjct: 1010 DLINVEQDSTDSENAGDFLKQM 1031



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 163/375 (43%), Gaps = 39/375 (10%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y SII    K     +A      M   G+ P   T+N+L+  + K+   ++    F    
Sbjct: 659  YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC------- 220
             K +  +  ++  +I G C++G+L+KAF + +++   G  P+  +Y++LIDGC       
Sbjct: 719  GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778

Query: 221  ---------------------------CKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
                                       CK+G +  A  L   + +  +     TYT+LI 
Sbjct: 779  KALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838

Query: 254  GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
               K G  K+  +F+  MQ   + P+  TY  L+  Y   G+ SE F LFDEM  +++  
Sbjct: 839  YHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEP 898

Query: 314  NVVTYNTLICGLCKEMRVQEAERLLDQM--KMAGISPNVITYNKLIDGFCDAGETDKAFR 371
            + VT++ +I    KE    +  +L+D M  K   +S NV   + LID  C      +  +
Sbjct: 899  DGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHVSEVLK 956

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            +  +++  G + S+ T + L+R F KAG    A+ +++ M      P       LI+   
Sbjct: 957  VLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQ 1016

Query: 432  RSDDMEKAFEMYSLM 446
             S D E A +    M
Sbjct: 1017 DSTDSENAGDFLKQM 1031


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 272/553 (49%), Gaps = 12/553 (2%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P++A S F   S    + HT ++ + +L  L         AA    + K I  R   +  
Sbjct: 102 PIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYL 161

Query: 84  TP------RSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           T       R  L  +T +      +  V  +  Y  +I   ++S    +AL  + +M+  
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSE 221

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G++P   T+++L++ + K    +   +   E     +  +VY+F I I+    AG +++A
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +E+  ++++ G  P++V YT LID  C  G +E AK LF K+   G    Q  Y  L+  
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL-D 340

Query: 255 LFKNGLQKDGF-EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            F +    D F EF+ +M+ +G  P + T+  L+   C      E F  FD MR + +  
Sbjct: 341 KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N+ TYNTLICGL +  R+++A +LL  M+  G+ P   TYN  ID F  +GET KA   F
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++K+ G  P++V  N  + + ++ G  + A  +   + E G+ P  VTY +++  + + 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +++A  + S M ++G  PDV     LI  L   G + EA ++F+ M + KL P  V Y
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++ G  KEG   +A+ L   M EK   PN  S+++ +   C++ +   A  + ++M  
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 554 LGLKPSVSLYNIL 566
           +  KP V  YN +
Sbjct: 641 MDCKPDVLTYNTV 653



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 233/502 (46%), Gaps = 40/502 (7%)

Query: 104 TKSRLYESIIDAHLKSRLSD--QALFYFHQMLD-SGVRPRSNTFNSLLIFV-IKSCSFDK 159
           T+ R+ E  +   LKS ++D  +AL YF+ + +   V   + T N +L F+ +     D 
Sbjct: 83  TEIRVSEDEVLGVLKS-MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDM 141

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
             +F    +  +  D+ ++  + K     G L +   VLN++ + GF  N   Y  LI  
Sbjct: 142 AAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHL 201

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             ++G    A  ++R++   GL  +  TY+ L+  L K    +      ++M+  G+ P+
Sbjct: 202 LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN 261

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL- 338
           +YT+   I      GK+ E +++F  M       ++VTY  LI  LC   +++ A+ L  
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 339 ----------------------------------DQMKMAGISPNVITYNKLIDGFCDAG 364
                                              QM+  G  P+V+T+  L+D  C A 
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+AF  F+ ++  G  P++ TYN LI    +AG  + A  L+  ME  G+ P+  TY 
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYN 441

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           I ID F +S +  KA E +  M+  G  P++      ++ L   G ++EA  +FN + E 
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L P+ V YNMM+  Y K G    A+ LL EM   G  P++   +S I  L + G+  EA
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             + ++M  + L P+V  YN L
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTL 583



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 184/361 (50%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y ++       G + +   +  K+ + G V   ++Y  LI  L ++G   +  E Y +M 
Sbjct: 160 YLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 219

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ PSL TY+ L+     +        L  EM    +  NV T+   I  L +  ++ 
Sbjct: 220 SEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA  +  +M   G  P+++TY  LID  C+AG+ + A  LF ++K+NG  P  V Y  L+
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL 339

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F+  G+     +   +ME  G  P  VT+TIL+D   ++ D ++AF  + +M+K G  
Sbjct: 340 DKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGIL 399

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+++TY  LI GL   G +++A KL  +M    ++P    YN+ I  + K G + +A+  
Sbjct: 400 PNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVET 459

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             +M  KG+VPNI + ++++  L + G+  EA+ + N + + GL P    YN++ +  + 
Sbjct: 460 FEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSK 519

Query: 573 I 573
           +
Sbjct: 520 V 520



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 2/463 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + +++D   K+   + AL  F +M     +P   T+N+++  +IK    +  + FF + +
Sbjct: 615  FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   L+ G  + G +  A  +    + ++ F  N   +  L+ G     +++
Sbjct: 675  KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCL 286
            +A +   ++   G+         L+  L K+  +   ++ ++K     G+SP+L +YNCL
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I E        + + LF +M++   A +  T+N L+    K  ++ E   L  +M     
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             P+ ITYN +I     +   DKA   F  L S+   P+  TY  LI   +K G  + A  
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L  EM + G  P+   + ILI+ + +  D E A +++  M   G  PD+ +Y +L+  LC
Sbjct: 915  LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLC 974

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            + G + EA   FN +  T L+P+ + YN +I G  K      AL L  EM  +G+VP++ 
Sbjct: 975  LAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLY 1034

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+S +  L   G   +A+ +  ++   GL+P V  YN L R 
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 211/459 (45%), Gaps = 39/459 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK------SCSFDKGWL 162
            Y ++I   +K    + A ++FHQ L   + P   T  +LL  ++K      + S  + ++
Sbjct: 650  YNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFM 708

Query: 163  F---FSENR-----------CKVELD---VYSFGILIKGCCEAGDL----------NK-- 193
            +   F  NR            + E+D   +++  +++ G C               +K  
Sbjct: 709  YQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRE 768

Query: 194  --AFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
              A+++ ++  +++G SP +  Y  LI    +    E+A  LF+ +  +G      T+ +
Sbjct: 769  LYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNM 828

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            L+    K+G   + FE Y++M      P   TYN +I        + +    F ++   +
Sbjct: 829  LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
                  TY  LI GL K  R++EA RL ++M   G  PN   +N LI+G+   G+T+ A 
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +LF ++ + G  P + +Y +L+     AG    A     E++  G+ P  + Y  +I+  
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             +S  ME+A  +Y+ M+  G  PD+YTY  L+  L + G +++A +++  +    LEP+ 
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 491  VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
              YN +I GY    N   A  +   M   G  PNI +Y+
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 217/496 (43%), Gaps = 39/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +IDA   +   + A   F +M  +G +P    + +LL         D    F+S+  
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV +F IL+   C+A D ++AF   + + + G  PN+  Y +LI G  + G IE
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP-------SL 280
            A  L   +  +G+  T +TY + I    K+G      E +EKM+  G+ P       SL
Sbjct: 420 DALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479

Query: 281 Y----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           Y                            TYN ++  Y   G+V E   L  EM      
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+  N+LI  L K  RV EA ++ D+MK   +SP V+TYN L+ G    G   KA  L
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F  +     SP+ +++N L+  F K    ++A  +  +M      P  +TY  +I   ++
Sbjct: 600 FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-MWETKLEPNDV 491
            + +  AF  +  ++KS   PD  T   L+ GL   G + +A  +    M++ +   N  
Sbjct: 660 ENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +  ++ G   E    +A+    E+   G+    +     + VLC+  +   A  + ++ 
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778

Query: 552 L-KLGLKPSVSLYNIL 566
             KLG+ P+++ YN L
Sbjct: 779 TKKLGISPTLASYNCL 794



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/616 (23%), Positives = 258/616 (41%), Gaps = 54/616 (8%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISI-ILRLLLSKMS 59
           M  +     Q + + L+ +      L  F  F W+  +   + P  ++  IL  +L K  
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEF-WSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQL-----------FPSSSNPVTKSRL 108
               A A   +++     I  +  T  +L+C L +               S      +  
Sbjct: 382 DFDEAFATFDVMR--KQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y   ID   KS  + +A+  F +M   G+ P     N+ L  + +     +    F+  R
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  ++ +++K   + G +++A  +L+++   G  P+V++  SLID   K G ++
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F ++ ++ L  T  TY  L+ GL K G  +   E +E M     SP+  ++N L+
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   +V    K+F +M   +   +V+TYNT+I GL KE +V  A     Q+K + + 
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MH 678

Query: 348 PNVITYNKLIDGFCDAG------------------------------------ETDKAFR 371
           P+ +T   L+ G    G                                    E DKA  
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GITPSEVTYTILIDSF 430
              +L  NG          L+R   K      A  +  +  ++ GI+P+  +Y  LI   
Sbjct: 739 FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +     EKA++++  M+  G +PD +T+ +L+      G + E  +L+  M   + +P+ 
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN++I    K  N  +AL    ++      P   +Y   I  L + G+  EA  L  +
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G KP+ +++NIL
Sbjct: 919 MSDYGCKPNCAIFNIL 934



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 6/341 (1%)

Query: 127  FYFHQMLDS-----GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGI 180
             Y +Q+ D      G+ P   ++N L+  +++    +K W  F + +      D ++F +
Sbjct: 769  LYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNM 828

Query: 181  LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            L+    ++G + + FE+  ++      P+ + Y  +I    K+ ++++A   F  +    
Sbjct: 829  LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888

Query: 241  LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
               T  TY  LI GL K G  ++    +E+M   G  P+   +N LI+ Y   G      
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 301  KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +LF  M +  +  ++ +Y  L+  LC   RV EA    +++K  G+ P+ I YN++I+G 
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008

Query: 361  CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              +   ++A  L+N++++ G  P + TYN L+     AG  + A  +  E++  G+ P  
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 421  VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             TY  LI  +  S++ E A+ +Y  M   G +P++ TY  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            SS+     R Y  +ID   K    ++A+  F +M D G +P    FN L+    K    +
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 159  KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                 F     + +  D+ S+ IL+   C AG +++A    N+L+  G  P+ + Y  +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            +G  K+  +E A  L+ ++   G+V   +TY  L+  L   G+ +     YE++QL G+ 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            P ++TYN LI  Y         + ++  M       N+ TY  L
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 212/382 (55%), Gaps = 1/382 (0%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  +VY++ IL++  C  G L +A  V+  +   G +PN V Y +L+   C+ G+++
Sbjct: 3   RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62

Query: 228 RAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A+ +   + E G       T+  ++ GL K G  +   + +++M   G++P + +YN L
Sbjct: 63  GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  YC  G + E   +F EM  R +  +VVT+ +LI   CK   +++A  L+ QM+  G+
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             N +T+  LIDGFC  G  D A     +++  G  PSVV YN LI  + K G   +A +
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+REME + + P  VTY+ +I  + +  +++ AF++   M K G  PD  TY  LI GLC
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 302

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +  + +A +LF +M +  ++P++  Y  +I G+CKEGN  +AL L  EM  KG++P++ 
Sbjct: 303 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 362

Query: 527 SYSSTIGVLCQDGKWPEAEVLL 548
           +YS  I  L +  +  EA  LL
Sbjct: 363 TYSVLINGLSKSARTKEAHRLL 384



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 234/471 (49%), Gaps = 21/471 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSF 157
           + N VT    Y +++ A  ++   D A      M + G  +P   TFNS++  + K+   
Sbjct: 42  APNAVT----YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 97

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +     F E  R  +  DV S+  L+ G C+ G L+++  V +++ + G  P+VV +TSL
Sbjct: 98  EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 157

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I   CK G++E+A  L  ++ E GL   + T+T LI G  K G   D     E+M+  G+
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            PS+  YN LI+ YC  G++    +L  EM  + V  +VVTY+T+I G CK   +  A +
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L  +M   G+ P+ ITY+ LI G C+    + A  LF  +   G  P   TY  LI    
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 337

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K GN + A  L  EM  +G+ P  VTY++LI+   +S   ++A  +   +      PD  
Sbjct: 338 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 397

Query: 457 TYGVL---------------IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            Y  L               + G CMKG MKEA K++ SM +   + +  VY+++I G+C
Sbjct: 398 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 457

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + GN  +AL    +M   G  PN  S  S +  L ++G   EA+  +  +L
Sbjct: 458 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 226/452 (50%), Gaps = 17/452 (3%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGD 190
           M+  GV P   T+N L+  +      ++      + R      +  ++  L+   C AG+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 191 LNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           L+ A  V++ + E G + PN+V + S+++G CK G +E A+ +F ++   GL     +Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  K G   +    + +M   G+ P + T+  LIH  C  G + +   L  +MR R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N VT+  LI G CK+  + +A   +++M+  GI P+V+ YN LI+G+C  G  D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  ++++    P VVTY+ +I  + K GN   A  L ++M ++G+ P  +TY+ LI  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                 +  A E++  M + G  PD +TY  LI G C +GN+++A  L + M    + P+
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP-NI-----------ASYSSTIGVL-- 535
            V Y+++I G  K   +  A RLL ++  +  VP NI           A + S + +L  
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 536 -CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            C  G   EA+ +   ML    K   S+Y+IL
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 1/300 (0%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  +GV+P++YTYN L+   C  G++ E   +  +MR    A N VTYNTL+   C+   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 331 VQEAERLLDQMKMAG-ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +  AER++  M+  G   PN++T+N +++G C AG  + A ++F+++   G +P VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            L+  + K G    +  +  EM +RG+ P  VT+T LI +  ++ ++E+A  + + M++ 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G   +  T+  LI G C KG + +A      M +  ++P+ V YN +I GYCK G    A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             L+ EM  K + P++ +YS+ I   C+ G    A  L  +MLK G+ P    Y+ L R 
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 145/362 (40%), Gaps = 51/362 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++ID   K    D AL    +M   G++P    +N+L+    K    D       E  
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ DV ++  +I G C+ G+L+ AF++  ++ + G  P+ + Y+SLI G C+   + 
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  + +LG+   + TYT LI G  K G  +     +++M   GV P + TY+ LI
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 368

Query: 288 --------------------HE------------------------------YCNEGKVS 297
                               HE                              +C +G + 
Sbjct: 369 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 428

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  K++  M  R    +   Y+ LI G C+   V++A     QM  +G SPN  +   L+
Sbjct: 429 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 488

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G  + G   +A      L +            LI    K GN     D++  M   G+ 
Sbjct: 489 RGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLL 548

Query: 418 PS 419
           PS
Sbjct: 549 PS 550


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 227/460 (49%), Gaps = 39/460 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I    K +  +QAL +  +M+  G  P                             
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHP----------------------------- 44

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DVY++  +I   C    L++A + L ++     +PNVV YT LIDG CK G ++ 
Sbjct: 45  -----DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDE 99

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  K+ +   V T  TY  LI GL K     + ++  E+M  +G  P ++TY  LI 
Sbjct: 100 AVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLIT 158

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-IS 347
            +C   K  +  ++F+++  R    +VVTY+ LI GLCKE R++EA  L  +M  +G   
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TYN LI GFC  G+ D+A  L  ++   G SP VVTY  L+  F K      A DL
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M  +G+TP  VT+T L+D   R + +  A  +   M++   SP VYTY  ++ G C 
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              ++EA K    + E    PN V +N+MI G CK   S  A+ L+ E   +   P++  
Sbjct: 339 ANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
           Y++ I  LC++ K  EA  +  +ML + G  P+   Y+ L
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           S + V YTSLI G CK   +E+A +   K+   G     +TYT +I  L       +  +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F E+M    ++P++ TY  LI   C  G+V E   L  +MR + V    VTYN+LI GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLC 126

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  R  EA  LL++M  +G  P++ TY  LI GFC + ++D A R+F QL + G  P VV
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           TY+ LI    K G  K A DL   M + G   P+ VTY  LI  F R   M++A  +   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M ++G SPDV TY  L++G C    + +A  L N M    L P+ V +  ++ G C+E  
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+ +LGEM  K   P + +Y++ +   C+  +  EA   +  + ++   P+V  +NI
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364

Query: 566 LYRA 569
           + R 
Sbjct: 365 MIRG 368



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 223/450 (49%), Gaps = 8/450 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I A        +A  +  +M +  + P   T+  L+  + K    D+     S+ R
Sbjct: 49  YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            K      ++  LI G C+A   ++A+++L ++   G  P++  YT+LI G CK+   + 
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 168

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLI 287
           A  +F ++   G      TY+ LI GL K G  K+  + + +M  +G   P+  TYN LI
Sbjct: 169 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  GK+ E   L + M     + +VVTY TL+ G CK  R+ +A  LL+QM   G++
Sbjct: 229 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+T+  L+DG C       A  +  +++    SP+V TYN ++  + +A   + A   
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  +EE    P+ V++ I+I    + +   +A E+    ++   +PDV  Y  +I GLC 
Sbjct: 349 M--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406

Query: 468 KGNMKEASKLFNSMWETK-LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           +  + EA +++  M E     PN + Y+ ++ G C  G   RA   +    EKG VPNI 
Sbjct: 407 EKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIG 462

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +Y+  I    +  +  +A  LL+ M++ G 
Sbjct: 463 TYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 152/294 (51%), Gaps = 2/294 (0%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           N  S    TY  LI   C   ++ +      +M  +    +V TY  +I  LC E R+ E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A + L++M    ++PNV+TY  LIDG C  G  D+A  L ++++     P+ VTYN LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLIS 123

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              KA  +  A DL+ EM   G  P   TYT LI  F +S   + A  ++  +   GF P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           DV TY  LI GLC +G +KEA  LF  M ++    PN V YN +I G+C+ G    A+ L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L  M E G  P++ +Y++ +   C+  +  +A  LLNQM + GL P V  +  L
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 1/191 (0%)

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + +N  S   VTY  LI+   K    + A   + +M  +G  P   TYT +I +    + 
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A +    M     +P+V TY VLI GLC  G + EA  L + M + K  P  V YN 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G CK   +  A  LL EM   G +P+I +Y++ I   C+  K  +A  +  Q++  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 556 LKPSVSLYNIL 566
            +P V  Y+ L
Sbjct: 181 FRPDVVTYSCL 191


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 225/480 (46%), Gaps = 41/480 (8%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC---KVELDVYSF 178
           SD+    F +MLD+G  P S T++ ++  + +    DK +    + +    K E+ VY+ 
Sbjct: 141 SDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYT- 199

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            IL +  C+ G L  A E+   +     SP+ + Y ++I G C+  D + A    +++ E
Sbjct: 200 -ILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
             +     TY +LI GL K        E   +M   GV+P   T+N ++   C  GK   
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              L   M  R    +  TYNTLI GLCK+  V  A+ L+D+   +G  P+V+TY+ L D
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G C  G  D+AF L  ++   G +P++VTYN LI    KA  ++ A +L+  +   G  P
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             VTYTI++D   +   ++KA +M   M K G +P V TY  L+ GLC  G + EA  +F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 479 NSMWETKLEPNDV--------------------------------VYNMMIFGYCKEGNS 506
             M       + +                                VYN ++ GYCKEG  
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 554

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                +  +M  +G VPNI +Y+  +  LC+ GK  EA   L  M   G  P V  YNI+
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 232/512 (45%), Gaps = 69/512 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y  +ID   K+  +D+A    H+M+D GV P + TFNS++  + K+  F++        +
Sbjct: 264 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323

Query: 166 ENRCKVEL---------------------------------DVYSFGILIKGCCEAGDLN 192
           E  C+                                    DV ++ IL  G C+ G ++
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +AFE++ ++   G +PN+V Y +LIDG CK    E+A  L   +   G V    TYT+++
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G      +  E M   G +PS+ TY  L+   C  G+V E   +F EM  ++  
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503

Query: 313 CNVVTY--------------------------------NTLICGLCKEMRVQEAERLLDQ 340
            + + Y                                N L+ G CKE R+ E   + + 
Sbjct: 504 ADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  PN+ TYN ++DG C  G+ D+AF     + S G  P VV+YN++I    KA  
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            K A  ++ +M + GI P  VTY  L+  F + +  + A  +   M K+G  PD  TY  
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           LI GL     + +A +L + M       +    YN +I   CKEG   +AL L+  M   
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           G+  N  +Y+  I  LC++G+  EA  LL++M
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 255/581 (43%), Gaps = 76/581 (13%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAA---------------AQTL 69
           P  A   F WA  +G +H+  + +  L+ LL   SS    A                  L
Sbjct: 106 PQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHL 165

Query: 70  ILKIIS------------GRITSSSFTPR-SLLCHLTQLFPSSSN-----------PVTK 105
           ++K +              +     F P  S+   LT+ F  +             P   
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPD 225

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +  Y +II  H +    D AL +  +M +  V P                          
Sbjct: 226 AIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP-------------------------- 259

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                   DV+++ ILI G C+A   +KA E+L+++ + G +P+ V + S++DG CK G 
Sbjct: 260 --------DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 311

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ERA  L   + E     +  TY  LI GL K        +  ++   +G  P + TY+ 
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L    C  G++ E F+L  EM  +    N+VTYNTLI GLCK  + ++A  LL+ +  +G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+V+TY  ++DG C  G  DKA ++   +   G +PSV+TY  L+    + G    A 
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            + +EM  +  T   + Y  L++ + +S   ++A ++   ++    +P +  Y  L+ G 
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGY 548

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G + E   +F  M      PN   YN+++ G CK G    A   L  M+  G VP++
Sbjct: 549 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 608

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            SY+  I  L +  K  EA  +L+QM++ G+ P    YN L
Sbjct: 609 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 231/538 (42%), Gaps = 73/538 (13%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           SS  V     Y  + D   K    D+A     +M   G  P   T+N+L+  + K+   +
Sbjct: 359 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418

Query: 159 KGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K + L  S        DV ++ I++ G C+ G L+KA +++  + + G +P+V+ YT+L+
Sbjct: 419 KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK--------------- 262
           +G C+ G ++ A  +F+++      A    Y  L+ G  K+   K               
Sbjct: 479 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI 538

Query: 263 -------DGF----------EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                  DG+            +E M   G  P++ TYN ++   C  GKV E F   + 
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M       +VV+YN +I GL K  + +EA ++LDQM  AGI P+ +TYN L+  FC    
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE-VTYT 424
            D A  +   +   G  P  VTYN LI   S+      A +L+ EM   G   S   TY 
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            +ID   +   +++A  +   M   G   +  TY + I  LC +G + EAS L + M   
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRA----------------------------------- 509
           +   ++V Y  +I G CK     RA                                   
Sbjct: 779 R---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 510 -LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L LLG M ++G  P++ +Y+  I  LC+  K  +A  L ++M   G+  S   Y +L
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 176/373 (47%), Gaps = 31/373 (8%)

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D + A + F   G+ G   +  T    +  L +NG        +E+M   G +P  YTY+
Sbjct: 105 DPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYH 164

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHR----EVAC--------------------------- 313
            +I   C   ++ + F + D+ + R    EV+                            
Sbjct: 165 LVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP 224

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           + + YN +I G C++     A   L +M    ++P+V TYN LIDG C A +TDKA  + 
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++   G +P  VT+N ++    KAG  + A  L+  M ER   PS  TY  LI    + 
Sbjct: 285 HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ 344

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++++A ++      SGF PDV TY +L  GLC +G + EA +L   M      PN V Y
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G CK   + +A  LL  +   G VP++ +Y+  +  LC++G+  +A  ++  MLK
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464

Query: 554 LGLKPSVSLYNIL 566
            G  PSV  Y  L
Sbjct: 465 RGCTPSVITYTAL 477



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 213/491 (43%), Gaps = 44/491 (8%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           SS  V     Y  I+D   K    D+AL     ML  G  P   T+ +L+  + ++   D
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 488

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +    F E   K    D  ++  L+ G C++    +A +V++ +     +P + +Y +L+
Sbjct: 489 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALM 545

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK G ++    +F  +   G V    TY +++ GL K+G   + F F E M   G  
Sbjct: 546 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV 605

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P + +YN +I       K  E  ++ D+M    +  + VTYNTL+   CKE R  +A  +
Sbjct: 606 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 665

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV-VTYNVLIRAFS 396
           L  M  AG+ P+ +TYN LI G         A+ L +++  NG   S   TYN +I    
Sbjct: 666 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 725

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G  K A  L+  M   G+  + VTY I ID   +   +++A    SL+ +     D  
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA---SSLLSEMDTLRDEV 782

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETK------------------------------- 485
           +Y  +I GLC    +  ASKL   M   K                               
Sbjct: 783 SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGL 842

Query: 486 -----LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                  P+ + YNM+I   CK     +A  L  EM  +G+V +  SY+  I  LC  G+
Sbjct: 843 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 902

Query: 541 WPEAEVLLNQM 551
             EA  +L +M
Sbjct: 903 GKEALQVLEEM 913



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 6/389 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SE 166
           +Y +++D + K    D+    F  M   G  P   T+N ++  + K    D+ + F  S 
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +      DV S+ I+I G  +A    +A +VL+Q+ + G  P+ V Y +L+   CK    
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNC 285
           + A  + + + + G+     TY  LI GL +     D +E   +M  NG V  +  TYN 
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I   C EG + +   L D M    V  N VTYN  I  LCKE R+ EA  LL +M    
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL- 778

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-NGQSPSVVTYNVLIRAFSKAGNSKMA 404
              + ++Y  +I G C A + D+A +L  ++ +  G   +  T+N+LI AF+K      A
Sbjct: 779 --RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L+  M +RG +PS +TY ++I    + D ++KA+E++  M   G      +Y VLI+G
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           LC +G  KEA ++   M  +  E +D+ +
Sbjct: 897 LCGQGRGKEALQVLEEMASSDCEIDDLKW 925



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           + G+S R   +   M + G  P+  +Y   I  LCQ  +  +A  +L++    G KP VS
Sbjct: 137 ENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVS 196

Query: 562 LYNILYRA 569
           +Y IL RA
Sbjct: 197 VYTILTRA 204


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/456 (32%), Positives = 239/456 (52%), Gaps = 15/456 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA LK RL  +A      M   G+ P  +T+N L+      C + +  L     +
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLV------CGYCRLGLLKEATK 304

Query: 169 CKVEL--------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             +E+         V+++ +L+ G C  G +++AF + +++E+M   P+VV Y +LIDGC
Sbjct: 305 V-IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGC 363

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +  D      L  ++ + G+     TY +++  + K G   +     +KM+ NG+SP  
Sbjct: 364 SQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDC 423

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TYN LI  YC  GK+ + F++ DEM  + +  +  T NT++  LC E ++ EA  LL  
Sbjct: 424 VTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCS 483

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
               G   + ++Y  LI G+    + D+A  L++++K     PS +TYN +I    ++  
Sbjct: 484 ASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRK 543

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A D + EM E G+ P E TY I+I  F    ++EKAF+ ++ M ++ F PDVYT  +
Sbjct: 544 VDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNI 603

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ GLC +G +++A KLFN++     + + V YN +I   CKEG    A  LL EM  K 
Sbjct: 604 LLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKK 663

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           L P+  +Y   I  L   G+  EAE    +M++ G+
Sbjct: 664 LGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 273/578 (47%), Gaps = 82/578 (14%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           A++L++  IS        + R    H   L P+   P     L ++ I A+++      A
Sbjct: 108 AKSLLISFIS--------SDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLA 159

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVY----SFGIL 181
              F++M     RP   T N+L+  +++  S     L     +  ++L V     SF IL
Sbjct: 160 TQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNIL 219

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C    +  A + +N++ E G  P+ V Y +++D   K   ++ A+ L   +   GL
Sbjct: 220 IYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGL 279

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              +HTY +L+CG  + GL K+  +  E M  N + P+++TYN L++ +CN+GK+ E F+
Sbjct: 280 SPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFR 339

Query: 302 LFDEMRHREVACNVVTYNTLICG-----------------------------------LC 326
           + DEM    V  +VVTYNTLI G                                   +C
Sbjct: 340 IRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMC 399

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV- 385
           K+  + EA   LD+M+  G+SP+ +TYN LI  +C AG+  KAFR+ +++ S G      
Sbjct: 400 KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTW 459

Query: 386 ----------------------------------VTYNVLIRAFSKAGNSKMASDLVREM 411
                                             V+Y +LI  + K      A +L  EM
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           +ER I PS +TY  +I    +S  +++A +  + M ++G  PD  TY ++IHG C++GN+
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A +  N M E   +P+    N+++ G C+EG   +AL+L   +  KG   ++ +Y++ 
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC++GK+  A  LL +M    L P    Y ++  A
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 172/366 (46%), Gaps = 24/366 (6%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
           +A     +M ++G+ P   T+N+L+    K+    K +    E   K +++D ++   ++
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTIL 465

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C    L++A+ +L    + G+  + V Y  LI G  K+   +RA  L+ ++ E  ++
Sbjct: 466 HCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIM 525

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  TY  +I GL ++       +   +M  NG+ P   TYN +IH +C EG V + F+ 
Sbjct: 526 PSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQF 585

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +EM       +V T N L+ GLC+E  +++A +L + +   G   +V+TYN +I   C 
Sbjct: 586 HNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCK 645

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT----- 417
            G+ + A+ L  ++++    P   TY V+I A + AG  K A +   +M E GI      
Sbjct: 646 EGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNL 705

Query: 418 ---------PSEVTYTILIDSFVRSDDMEK---------AFEMYSLMQKSGFSPDVYTYG 459
                     SEV+      S   SD + +         A  ++  + K G + + YTY 
Sbjct: 706 KLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYL 765

Query: 460 VLIHGL 465
            L+ GL
Sbjct: 766 NLMEGL 771



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 59/352 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I A+ K+    +A     +M   G++  + T N++L  +      D+ + L  S +
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +    LD  S+GILI G  +    ++A  + ++++E    P+ + Y S+I G C++  ++
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A     ++ E GLV  + TY ++I G    G  +  F+F+ +M  N   P +YT N L+
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILL 605

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM------------------ 329
              C EG + +  KLF+ +  +    +VVTYNT+I  LCKE                   
Sbjct: 606 RGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLG 665

Query: 330 -----------------RVQEAERLLDQMKMAGI----------SPNVIT---------- 352
                            R++EAE    +M  +GI            NV+T          
Sbjct: 666 PDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFK 725

Query: 353 ---YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              Y+  I+  C+  +   A  LF ++   G + +  TY  L+    K   S
Sbjct: 726 SIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKS 777



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 21/280 (7%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+ PS+         Y S+I    +SR  DQA+   ++ML++G+ P   T+N ++     
Sbjct: 523 QIMPSTIT-------YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575

Query: 154 SCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
             + +K + F +E    + + DVY+  IL++G C  G L KA ++ N L   G   +VV 
Sbjct: 576 EGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y ++I   CK G  E A  L  ++    L   Q+TY V+I  L   G  K+  EF  KM 
Sbjct: 636 YNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMV 695

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +G+          +H+     K+ +G  +             + Y+  I  LC + + +
Sbjct: 696 ESGI----------VHD--QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYK 743

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGE-TDKAFR 371
           +A  L  ++   G++ N  TY  L++G     + T KA R
Sbjct: 744 DAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 252/497 (50%), Gaps = 35/497 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I  +      ++A      M  SGV P    +N+++  + K+   ++   +  E 
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + ++ D  +FG  I G  + G + +A +  +++ + G  PN  +YT LI+G  K G++
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +FR +  LG++    T +  I GL KNG  ++  + + +++  G+ P ++TY+ L
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C +G+V + F+L DEM  + +A N+  YN L+ GLCK   +Q A +L D M   G+
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY+ +IDG+C +    +AF LF+++ S G  P    YN L+    K G+ + A +
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 407 LVREMEERG----------------------------------ITPSEVTYTILIDSFVR 432
           L REM ++G                                  I P  VTYT +ID   +
Sbjct: 686 LFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ME+A  ++  MQ+     D  TY  L++G    G   E   LF  M    ++P++V 
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y ++I+ +CKE N   A +L  E+  KG++     +   I  LC+     EA  LL++M 
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 865

Query: 553 KLGLKPSVSLYNILYRA 569
           +LGLKPS++  + L R+
Sbjct: 866 ELGLKPSLAACSTLVRS 882



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 250/479 (52%), Gaps = 11/479 (2%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +G++T ++     +L H   L P+  NP     LY  +I+ H K+    +AL  F  +  
Sbjct: 467 TGKMTEAAKYFDEMLDH--GLMPN--NP-----LYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
            GV P   T ++ +  ++K+    +    FSE + K +  DV+++  LI G C+ G++ K
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AFE+ +++   G +PN+ IY +L+DG CK+GDI+RA+ LF  + E GL     TY+ +I 
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G  K+    + F  + +M   GV P  + YN L+H  C EG + +   LF EM  +  A 
Sbjct: 638 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA- 696

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
             +++NTLI G CK  ++QEA +L  +M    I P+ +TY  +ID  C AG+ ++A  LF
Sbjct: 697 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 756

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++        VTY  L+  ++K G S     L  +M  +G+ P EVTY ++I +  + 
Sbjct: 757 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 816

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D++ +AF++   +   G       + +LI  LC + ++ EASKL + M E  L+P+    
Sbjct: 817 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 876

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + ++  + + G    A R+   +   GLVP+  +    +     D    +A  L+ Q++
Sbjct: 877 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 247/493 (50%), Gaps = 37/493 (7%)

Query: 111 SIIDAHL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-R 168
           +II A L +++  ++A   F +M  +G++P  N  ++L+   ++    D+          
Sbjct: 213 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 272

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C + +++ ++ +LI G C+ G + KA E+L  +  +G  PN   +  LI+G C+  ++ R
Sbjct: 273 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGR 332

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  ++ +  LV +  +Y  +I GL          +  EKM  +G+ P++  Y+ LI 
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 392

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y +EG++ E  +L D M    VA ++  YN +I  L K  +++EA   L +++  G+ P
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 452

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +T+   I G+   G+  +A + F+++  +G  P+   Y VLI    KAGN   A  + 
Sbjct: 453 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512

Query: 409 R-----------------------------------EMEERGITPSEVTYTILIDSFVRS 433
           R                                   E++E+G+ P   TY+ LI  F + 
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++EKAFE++  M   G +P+++ Y  L+ GLC  G+++ A KLF+ M E  LEP+ V Y
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + MI GYCK  N   A  L  EM  KG+ P+   Y++ +   C++G   +A  L  +ML+
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 554 LGLKPSVSLYNIL 566
            G   ++S   ++
Sbjct: 693 KGFATTLSFNTLI 705



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 263/561 (46%), Gaps = 28/561 (4%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P +    F W+  Q     PQ +     L +   +S     A  ++ ++I    +SSS  
Sbjct: 84  PKRLLDFFYWSQSQ--MGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSIL 141

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF--------------- 129
              L           S+PV    +++ +ID++ +  + D+A   F               
Sbjct: 142 DSVLFWFRNY---GGSSPV----VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC 194

Query: 130 ---HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGC 185
                M + G+ P + T+  +   + ++   ++  L F E  +  ++ D  +   LI G 
Sbjct: 195 NSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
              GD+++   + + +   G   N++ Y  LI G CK G +E+A  + + +  LG     
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 314

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+ +LI G  +        E  ++M+   + PS  +Y  +I+  C+   +S   KL ++
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    +  NVV Y+TLI G   E R++EA RLLD M  +G++P++  YN +I     AG+
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            ++A     +++  G  P  VT+   I  +SK G    A+    EM + G+ P+   YT+
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI+   ++ ++ +A  ++  +   G  PDV T    IHGL   G ++EA K+F+ + E  
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   Y+ +I G+CK+G   +A  L  EM  KG+ PNI  Y++ +  LC+ G    A 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L + M + GL+P    Y+ +
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTM 635



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 238/490 (48%), Gaps = 39/490 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +II    K+   ++A  Y  ++   G++P + TF + ++   K+    +   +F E  
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +       +Y+  +LI G  +AG+L +A  +   L  +G  P+V   ++ I G  KNG 
Sbjct: 482 DHGLMPNNPLYT--VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +F ++ E GLV    TY+ LI G  K G  +  FE +++M L G++P+++ YN 
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C  G +    KLFD M  + +  + VTY+T+I G CK   V EA  L  +M   G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659

Query: 346 ISPN----------------------------------VITYNKLIDGFCDAGETDKAFR 371
           + P+                                   +++N LIDG+C + +  +A +
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 719

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF ++ +    P  VTY  +I    KAG  + A+ L +EM+ER +    VTYT L+  + 
Sbjct: 720 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 779

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +     + F ++  M   G  PD  TYG++I+  C + N+ EA KL + +    +     
Sbjct: 780 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 839

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +++++I   CK  +   A +LL EM E GL P++A+ S+ +    + GK  EA  +   +
Sbjct: 840 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV 899

Query: 552 LKLGLKPSVS 561
             LGL P  +
Sbjct: 900 KSLGLVPDTT 909


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/447 (34%), Positives = 225/447 (50%), Gaps = 2/447 (0%)

Query: 109 YESIIDAHLKSR-LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++ +I  +++SR + D  L +   M    + P   T ++LL  ++K   F      F + 
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  DVY +  +I+  CE  DL++A E++ Q+E  G   N+V Y  LIDG CK   +
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  + + +    L     TY  L+CGL K    + G E  ++M     SPS    + L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +      GKV E   L   +    V+ N+  YN LI  LCK     EAE L D+M   G+
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY+ LID FC  G+ D A     ++   G  PSV  YN LI    K G+   A  
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAES 458

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM  + + P+ VTYT L+  +     + KA  +Y  M   G  P +YT+  L+ GL 
Sbjct: 459 LMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLF 518

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +++A KLF  M E  ++PN V YN+MI GYC+EGN  +A   L EM EKG+VP+  
Sbjct: 519 RAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTY 578

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           SY   I  LC  G+  EA+V ++ + K
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 239/495 (48%), Gaps = 36/495 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID+  K R  D+A   F +M   G+ P   T++ L+    +    D    F  E 
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++  VY +  LI G C+ GD++ A  ++ ++      P VV YTSL+ G C  G I
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  L+ ++   G+V + +T+T L+ GLF+ GL +D  + + +M    V P+  TYN +
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC EG +S+ F+  +EM  + +  +  +Y  LI GLC   +  EA+  +D +     
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             N I Y  L+ GFC  G+ ++A  +   +   G    +V Y VLI    K  + K+   
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L++EM +RG+ P +V YT +ID+  ++ D ++AF ++ LM   G  P+  TY  +I+GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 467 MKGNMKEASKLFNSMWETKLEPNDV----------------------------------- 491
             G + EA  L + M      PN V                                   
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTA 788

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YNM+I G+C++G    A  L+  M   G+ P+  +Y++ I  LC+     +A  L N M
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM 848

Query: 552 LKLGLKPSVSLYNIL 566
            + G++P    YN L
Sbjct: 849 TEKGIRPDRVAYNTL 863



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 206/403 (51%), Gaps = 10/403 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  L+ G C+  +     E+++++  + FSP+    +SL++G  K G +E A  L 
Sbjct: 296 DVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLV 355

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++ E G+      Y  LI  L K     +    +++M   G+ P+  TY+ LI  +C  
Sbjct: 356 KRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRR 415

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+        EM    +  +V  YN+LI G CK   +  AE L+ +M    + P V+TY
Sbjct: 416 GKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTY 475

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G+C  G+ +KA RL++++   G  PS+ T+  L+    +AG  + A  L  EM E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE 535

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             + P+ VTY ++I+ +    +M KAFE  + M + G  PD Y+Y  LIHGLC+ G   E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A    + + +   E N++ Y  ++ G+C+EG    AL +  +M  +G+  ++  Y   I 
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI- 654

Query: 534 VLCQDG--KWPEAEV---LLNQMLKLGLKPSVSLYNILYRAKN 571
               DG  K  + +V   LL +M   GLKP   +Y  +  AK+
Sbjct: 655 ----DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKS 693



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 228/479 (47%), Gaps = 36/479 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +ID   K +   +A+     +    ++P   T+ +L+  + K   F+ G     E  
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEML 324

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R +      +   L++G  + G + +A  ++ ++ E G SPN+ +Y +LID  CK  + +
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD 384

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A++LF ++G++GL     TY++LI    + G       F  +M   G+ PS+Y YN LI
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G +S    L  EM ++++   VVTY +L+ G C + ++ +A RL  +M   GI 
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIV 504

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ T+  L+ G   AG    A +LF ++      P+ VTYNV+I  + + GN   A + 
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564

Query: 408 VREMEERGITP-----------------------------------SEVTYTILIDSFVR 432
           + EM E+GI P                                   +E+ YT L+  F R
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +E+A  +   M   G   D+  YGVLI G     + K    L   M +  L+P+DV+
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           Y  MI    K G+   A  +   M  +G VPN  +Y++ I  LC+ G   EAE+L ++M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 199/425 (46%), Gaps = 37/425 (8%)

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           F+ L+   ++S     G L F     KV L  +V +   L+ G  +      A E+ + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
             +G  P+V IYT +I   C+  D+ RAK                               
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAK------------------------------- 247

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
               E   +M+  G   ++  YN LI   C + KV E   +  ++  +E+  +VVTY TL
Sbjct: 248 ----EMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTL 303

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +CGLCK    +    ++D+M     SP+    + L++G    G+ ++A  L  ++   G 
Sbjct: 304 VCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGV 363

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           SP++  YN LI +  K  N   A  L   M + G+ P++VTY+ILID F R   ++ A  
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALS 423

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               M   G  P VY Y  LI+G C  G++  A  L   M   KLEP  V Y  ++ GYC
Sbjct: 424 FLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYC 483

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            +G   +ALRL  EM  KG+VP+I ++++ +  L + G   +A  L  +M +  +KP+  
Sbjct: 484 SKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRV 543

Query: 562 LYNIL 566
            YN++
Sbjct: 544 TYNVM 548



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 38/418 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++  +      ++AL  +H+M   G+ P   TF +LL  + ++         F+E  
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA 534

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP------------------- 208
              V+ +  ++ ++I+G CE G+++KAFE LN++ E G  P                   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 209 ----------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                           N + YT L+ G C+ G +E A  + + +G  G+      Y VLI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K+  +K      ++M   G+ P    Y  +I      G   E F ++D M +    
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA-GETDKAFR 371
            N VTY  +I GLCK   V EAE L  +M+     PN +TY   +D      G+  KA  
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE 774

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L N +   G   +  TYN+LIR F + G  + AS+L+  M   G++P  +TYT +I    
Sbjct: 775 LHNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           R +D++KA E+++ M + G  PD   Y  LIHG C+ G M +A++L N M    L+PN
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 170/587 (28%), Positives = 276/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 39  REGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN-RA 97

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P   S  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 98  ASRAQGPRVL------------SPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A +
Sbjct: 144 VNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SP+VV Y+++IDG  K GD+ +A  LF+++ + G+     TY+ ++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M   GV P+ +TYN LI+ Y + G+  E  ++F EMR   +  +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT + L+  LCK  +++EA  + D M M G +PNV +Y  +++G+   G       LF+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P + T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G +PD Y Y  LI G C  G++ +A +L                 
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P  VVY+M++ GYC  G   +ALR+   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN   Y + +   C+ G+  E   L  +ML+ G+KPS  LYNI+
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 230/459 (50%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F +M+  G+ P   T++S++  + K+ + DK   F  +  
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  + +++  LI G    G   +A  V  ++      P+VV  + L+   CK G I+
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +YT+++ G    G   D  + ++ M  +G++P +YT+N LI
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 401

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G++
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   Y+ LI GFC  G   KA  L +++ +NG    +V ++ +I    K G    A ++
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G+ P+ V Y++L+D +     MEKA  ++  M  +G  P+   YG L++G C 
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  M +  ++P+ ++YN++I G  + G +  A     EM E G+  N  +
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  +  L ++  + EA  L  ++  + +K ++   N +
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 234/496 (47%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++ A  K+R  D+A  +  QM++ GV P + T+N+L+     +  + +    F E  
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG--- 224
           R  +  DV +  +L+   C+ G + +A +V + +   G +PNV  YT +++G    G   
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 225 ----------------DI----------------ERAKMLFRKIGELGLVATQHTYTVLI 252
                           DI                ++A ++F ++ + G+     TY  +I
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y Y+CLI  +C  G + +  +L  E+ +  + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  RV +A+ + D     G+ P  + Y+ L+DG+C  G+ +KA R+
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+ V Y  L+  + K G       L REM ++GI PS + Y I+ID    
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + +  TY +++ GL       EA  LF  +    ++ N + 
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++  GLVP + +YS  I  L ++G   EAE + + M 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 553 KLGLKPSVSLYNILYR 568
             G +P   L N + R
Sbjct: 737 NAGCEPDSRLLNHVVR 752



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+ DV ++  +I   C 
Sbjct: 382 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G +P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++ +I  L K G   D    ++     G+ P+   Y+ L+  YC  GK+ +  ++FD M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N V Y TL+ G CK  R+ E   L  +M   GI P+ I YN +IDG  +AG T 
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G + +  TYN+++R   K      A  L +E+    +  + +T   +I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               ++  +E+A ++++ + +SG  P V TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           P+  + N ++    K+    RA   L +++E+
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 210/444 (47%), Gaps = 3/444 (0%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFH 130
           + S  I  + +  +  L  +T LF           +Y    +I A+    + D+A+  F+
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C  G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA E+++++   G   ++V ++S+I+  CK G +  A+ +F     +GL  T   Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G    G  +     ++ M   G+ P+   Y  L++ YC  G++ EG  LF EM  +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  + + YN +I GL +  R   A+    +M  +GI+ N  TYN ++ G       D+A
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEA 658

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF +L++     +++T N +I    +    + A DL   +   G+ P  VTY+I+I +
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++   +E+A +M+S MQ +G  PD      ++  L  K  +  A    + + E      
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
            +   +++  +  +G     +R L
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  N++  N L+ G C+  R  EA
Sbjct: 107 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA 165

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP VV Y+ +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY+ ++ +  ++  M+KA      M   G 
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ +TY  LI+G    G  KEA ++F  M    + P+ V  +M++   CK G    A  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  PN+ SY+  +      G   +   L + ML  G+ P +  +N+L +A  
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 572 N 572
           N
Sbjct: 406 N 406


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 250/473 (52%), Gaps = 1/473 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S   P   +  Y  +I    +S     AL  F +M+D GV P   T+N+++   +K    
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           + G+    +      + ++ ++ +L+ G C AG +++   +++++      P+   Y+ L
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            DG  + G+      LF +  + G++   +T ++L+ GL K+G      +  E +   G+
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P+   YN LI+ YC    +   F +F++M+ R +  + +TYN LI GLCK   V +AE 
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+ +M+ +G+ P+V T+N LID +  AG+ +K F + + ++  G    V+++  +++AF 
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G    A  ++ +M  + + P+   Y  +ID+++ S D E+AF +   M+ SG S  + 
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 367

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +L+ GLC    + EA +L  ++    L P+ V YN +I   C +G++ +AL LL EM
Sbjct: 368 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 427

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N+ G+ P + +Y + +  L   G+  + E L  QML   ++PS S+Y I+  A
Sbjct: 428 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 221/449 (49%), Gaps = 36/449 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--------- 159
           Y ++ID H+K    +       QML  G +P   T+N LL  + ++   D+         
Sbjct: 54  YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA 113

Query: 160 -------GWLF-------------------FSENRCK-VELDVYSFGILIKGCCEAGDLN 192
                  G+ +                   F+E+  K V L  Y+  IL+ G C+ G + 
Sbjct: 114 SHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 173

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA +VL  L   G  P  VIY +LI+G C+  D+  A  +F ++    +     TY  LI
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K  +     +   +M+ +GV PS+ T+N LI  Y   G++ + F +  +M+ + + 
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 293

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+++ +++   CK  ++ EA  +LD M    ++PN   YN +ID + ++G+T++AF L
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++K++G S S+VTYN+L++   ++     A +L+  +  +G+ P  V+Y  +I +   
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D +KA E+   M K G  P + TY  L+  L   G + +   L+  M    +EP+  +
Sbjct: 414 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           Y +M+  Y +  N  +   L  EM+EKG+
Sbjct: 474 YGIMVDAYVRCENDSKVASLKKEMSEKGI 502


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 237/492 (48%), Gaps = 8/492 (1%)

Query: 79  TSSSFTPRSLLCHLTQLFPS---SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           +  S  PR  L HL   F +   S  P  +   Y ++I+AH K  L   A     +M ++
Sbjct: 63  SRGSRAPR--LAHLLASFGAMLKSGAPPNRCT-YNTLINAHCKLALLADARAALVRMREA 119

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNK 193
           G+ P + T+N L++ + ++         F +   R     D YS+ ILIKG C AG ++ 
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDD 179

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  V  ++      P V  YT L+DG CK   +  A+ L  ++   G+V    TY  LI 
Sbjct: 180 ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIG 239

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL + G   D  +  EKM++   SP  +TY  ++H  C  GKV  G K+  E   + VA 
Sbjct: 240 GLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVAL 299

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
            V+TYN LI G CK   ++ A  +L  MK   ++P V T+N++I GFC  G+  KA    
Sbjct: 300 EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL 359

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            Q+   G SP+ VT+N LI      G  K+A  L+  MEE G+ P   TY I ID+    
Sbjct: 360 TQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDE 419

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +E+A  ++S +   G       Y  L+HG C  G++  A  L   M      P+   Y
Sbjct: 420 GQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTY 479

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G CK     RA+ LL +M ++G+ P   +++  I  +  D K  +A  +  QM+ 
Sbjct: 480 NTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMIS 539

Query: 554 LGLKPSVSLYNI 565
            G KP    Y +
Sbjct: 540 SGCKPDKQTYTL 551



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 231/488 (47%), Gaps = 16/488 (3%)

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
             P  +  H   L   SS      RL      AHL        L  F  ML SG  P   
Sbjct: 46  LDPSDVRSHNAALIAYSSRGSRAPRL------AHL--------LASFGAMLKSGAPPNRC 91

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T+N+L+    K              R   +  D +++  L+ G C AG L  A  +  Q+
Sbjct: 92  TYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM 151

Query: 202 -EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
               G   +   YT LI G C  G I+ A  +F K+         HTYTVL+ GL K   
Sbjct: 152 PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRR 211

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             +      +M   GV P++ TYN LI   C EG+  +  KL ++M  +  + +  TY  
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQ 271

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++ GLCK  +V    ++L +    G++  V+TYN LI+G+C  G+   A  +   +K N 
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            +P V T+N +I  F   G    A   + +M   G++P+ VT+  LI       + + A 
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIAL 391

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +  LM++ G  PD  TY + I  LC +G ++EA  LF+ +    ++ ++V+Y  ++ GY
Sbjct: 392 RLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGY 451

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G+   A  L+ +M  +  +P++ +Y++ I  LC+  +   A  LL++M K G++P+ 
Sbjct: 452 CQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511

Query: 561 SLYNILYR 568
             +NIL +
Sbjct: 512 CTFNILIK 519



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 213/451 (47%), Gaps = 11/451 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A   F +M     RP  +T+  LL  + K     +      E   K V  +V ++  L
Sbjct: 178 DDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER-AKMLFRKIGELG 240
           I G C+ G  +   ++L ++E    SP+   YT ++ G CK+G +   AK+L   IG+ G
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK-G 296

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI G  K G  K   +  + M+ N V+P + T+N +IH +C  GKV +  
Sbjct: 297 VALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAM 356

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
               +M    ++ N VT+N+LI G C     + A RLLD M+  G+ P+  TY   ID  
Sbjct: 357 AFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDAL 416

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CD G+ ++A  LF+ L   G     V Y  L+  + + G+   A  L+ +M      P  
Sbjct: 417 CDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  LID   +   +++A ++   M+K G  P   T+ +LI  +       +A+K++  
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQ 536

Query: 481 MWETKLEPNDVVYNMMIF-----GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           M  +  +P+   Y + I      G  KE N   A+    EM+E G+ P++ +Y++ I   
Sbjct: 537 MISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAY 593

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              G   +A     +ML + + P  + Y+IL
Sbjct: 594 VDAGLKEKAFFAHVKMLSVPIDPDCTTYSIL 624



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 196/490 (40%), Gaps = 52/490 (10%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCE 187
            H+ +  GV     T+N+L+    K               R +V   V +F  +I G C 
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++KA   L Q+   G SPN V + SLI G C  G+ + A  L   + E G++  + T
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y + I  L   G  ++    +  + + G+      Y  L+H YC  G +   F L ++M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 +V TYNTLI GLCK  R+  A  LLD+MK  GI P   T+N LI       +  
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHA 528

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRA--FSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            A +++ Q+ S+G  P   TY + I    F  A   +     V EM E G+ P   TY  
Sbjct: 529 DAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNA 588

Query: 426 LIDSFVRSDDMEKAF--------------------------------------------- 440
           +I ++V +   EKAF                                             
Sbjct: 589 IIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDV 648

Query: 441 ----EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
               E++  M +S  +P + TY  L+ GLC +  ++E   L   M    +  ++ + + +
Sbjct: 649 RNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYL 708

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +  YC       A      M  +   P + S    +  LC  G    A  + + ML LG 
Sbjct: 709 LGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGY 768

Query: 557 KPSVSLYNIL 566
                ++ +L
Sbjct: 769 NYDEVVWKLL 778



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 1/324 (0%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY  LI    K  L  D      +M+  G++P  +TYNCL+   C  G ++    LF +M
Sbjct: 92  TYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM 151

Query: 307 RHREVAC-NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
             R  AC +  +Y  LI GLC   R+ +A R+  +M      P V TY  L+DG C    
Sbjct: 152 PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRR 211

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  L  ++ + G  P+VVTYN LI    + G     + L+ +ME +  +P   TYT 
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQ 271

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++    +   +    ++       G + +V TY  LI+G C  G+MK A  +   M   +
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + P    +N +I G+C  G  ++A+  L +M   GL PN  +++S I   C  G+   A 
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIAL 391

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            LL+ M + G+ P    Y I   A
Sbjct: 392 RLLDLMEEYGVLPDRQTYAIFIDA 415



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 194/474 (40%), Gaps = 78/474 (16%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---------- 173
           +A+ +  QM  +G+ P + TFNSL+           G     E +  + L          
Sbjct: 354 KAMAFLTQMAGAGLSPNTVTFNSLI----------SGQCSVGERKIALRLLDLMEEYGVL 403

Query: 174 -DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            D  ++ I I   C+ G L +A  + + L   G   + VIYTSL+ G C+ GDI+ A  L
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             K+     +   HTY  LI GL K        +  +KM+  G+ P+  T+N LI +   
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLIC-----GLCKEMRVQEAERLLDQMKMAGIS 347
           + K ++  K++++M       +  TY   I      G  KE  +  A   + +M  AG+ 
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVF 580

Query: 348 PNVITYNKLIDGFCDAGETDKAF------------------------------------- 370
           P+V TYN +I  + DAG  +KAF                                     
Sbjct: 581 PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNE 640

Query: 371 ------------RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
                        LF Q+  +  +P + TY  L+R        +    L+ +M+   I  
Sbjct: 641 KIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILL 700

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
            E     L+  +   +   +A E +  M    F P + +  +L+ GLC  G+   A  +F
Sbjct: 701 DEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIF 760

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           + M       ++VV+ ++I    ++G++   L +L  M+ K  V +  +Y+S +
Sbjct: 761 SDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 152/376 (40%), Gaps = 25/376 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y S++  + +    D A     +M      P  +T+N+L+  + K    D+   L    
Sbjct: 443 IYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM 502

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI-----DGCC 221
            +  +E    +F ILIK          A ++  Q+   G  P+   YT  I     +G  
Sbjct: 503 KKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGAT 562

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K  +I+   M   ++ E G+     TY  +I      GL++  F  + KM    + P   
Sbjct: 563 KEENID---MAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCT 619

Query: 282 TYNCLIHEYCNEGKVSEGF---------------KLFDEMRHREVACNVVTYNTLICGLC 326
           TY+ L++  CN+   S+ F               +LF++M   + A  + TY  L+ GLC
Sbjct: 620 TYSILLNYMCNKDD-SDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLC 678

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
            + R++E E LL +M+   I  +    + L+  +C+     +A   F  +      P + 
Sbjct: 679 NQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLK 738

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           +  +L+     +G+  MA  +  +M   G    EV + +LID            EM S+M
Sbjct: 739 SCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVM 798

Query: 447 QKSGFSPDVYTYGVLI 462
                     TY  L+
Sbjct: 799 DAKKCVASTRTYASLV 814


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 227/460 (49%), Gaps = 39/460 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I    K +  +QAL +  +M+  G  P                             
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHP----------------------------- 44

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DVY++  +I   C    L++A + L ++     +PNVV YT LIDG CK G ++ 
Sbjct: 45  -----DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDE 99

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L  K+ +   V T  TY  LI GL K     + ++  E+M  +G  P ++TY  LI 
Sbjct: 100 AVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLIT 158

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-IS 347
            +C   K  +  ++F+++  R    +VVTY+ LI GLCKE R++EA  L  +M  +G   
Sbjct: 159 GFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TYN LI GFC  G+ D+A  L  ++   G SP VVTY  L+  F K      A DL
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M  +G+TP  VT+T L+D   R + +  A  +   M++   SP VYTY  ++ G C 
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              ++EA K    + E    PN V +N+MI G CK   S  A+ L+ E   +   P++  
Sbjct: 339 ANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
           Y++ I  LC++ K  EA  +  +ML + G  P+   Y+ L
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           S + V YTSLI G CK   +E+A +   K+   G     +TYT +I  L       +  +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F E+M    ++P++ TY  LI   C  G+V E   L  +MR + V    VTYN+LI GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLC 126

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  R  EA  LL++M  +G  P++ TY  LI GFC + ++D A R+F QL + G  P VV
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           TY+ LI    K G  K A DL   M + G   P+ VTY  LI  F R   M++A  +   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M ++G SPDV TY  L++G C    + +A  L N M    L P+ V +  ++ G C+E  
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+ +LGEM  K   P + +Y++ +   C+  +  EA   +  + ++   P+V  +NI
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364

Query: 566 LYRA 569
           + R 
Sbjct: 365 MIRG 368



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 223/450 (49%), Gaps = 8/450 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I A        +A  +  +M +  + P   T+  L+  + K    D+     S+ R
Sbjct: 49  YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            K      ++  LI G C+A   ++A+++L ++   G  P++  YT+LI G CK+   + 
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 168

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLI 287
           A  +F ++   G      TY+ LI GL K G  K+  + + +M  +G   P+  TYN LI
Sbjct: 169 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  GK+ E   L + M     + +VVTY TL+ G CK  R+ +A  LL+QM   G++
Sbjct: 229 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+T+  L+DG C       A  +  +++    SP+V TYN ++  + +A   + A   
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  +EE    P+ V++ I+I    + +   +A E+    ++   +PDV  Y  +I GLC 
Sbjct: 349 M--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406

Query: 468 KGNMKEASKLFNSMWETK-LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           +  + EA +++  M E     PN + Y+ +I G C  G   RA   +    EKG VPNI 
Sbjct: 407 EKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIG 462

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +Y+  I    +  +  +A  LL+ M++ G 
Sbjct: 463 TYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 152/294 (51%), Gaps = 2/294 (0%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           N  S    TY  LI   C   ++ +      +M  +    +V TY  +I  LC E R+ E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A + L++M    ++PNV+TY  LIDG C  G  D+A  L ++++     P+ VTYN LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLIS 123

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              KA  +  A DL+ EM   G  P   TYT LI  F +S   + A  ++  +   GF P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           DV TY  LI GLC +G +KEA  LF  M ++    PN V YN +I G+C+ G    A+ L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L  M E G  P++ +Y++ +   C+  +  +A  LLNQM + GL P V  +  L
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 1/191 (0%)

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + +N  S   VTY  LI+   K    + A   + +M  +G  P   TYT +I +    + 
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A +    M     +P+V TY VLI GLC  G + EA  L + M + K  P  V YN 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G CK   +  A  LL EM   G +P+I +Y++ I   C+  K  +A  +  Q++  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 556 LKPSVSLYNIL 566
            +P V  Y+ L
Sbjct: 181 FRPDVVTYSCL 191


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 252/490 (51%), Gaps = 42/490 (8%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF--------SENRCKVEL 173
           +  AL +FH M+ S   P  ++FN LL  + K   + + +  +        S +RC + +
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 174 ----------------------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
                                       ++ ++  LIKG C    +++A  +  +++++G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKI------GELGLVATQHTYTVLICGLFKNG 259
            +P+VV Y +LI G C  G+I  A  L +++       E+       TY +++ GL K G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
            + +  + +E+M+  G+ PS+ +YN LIH +C  GK  E  +L DEM  + +  ++VT+N
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            LI  LCKE +V EA++LL  M  +GI P+++TYN LI+GFC  G+ + A  LF  + S 
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P V++YNVLI  +SK    + A  L  EM   G  P+ +TY  L+     +  ++ A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +++S+M+  G + + YTYG+ + GLC    + EA KLF  +  +  +      N +I G
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            CK G    A  L  +++ +G  PN+ +Y+  I   C++G+  +A VL+ +M   G  P 
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529

Query: 560 VSLYNILYRA 569
           +  YN L R 
Sbjct: 530 IITYNTLMRG 539



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 224/437 (51%), Gaps = 7/437 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCE 187
           F  +L  G  P   T+N+L+  +       +   LF    +     DV ++G LIKG C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 188 AGDLNKAF----EVLNQLE--EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            G++N A     E+LN +   E+   PNV+ Y  ++DG CK G  + AK LF ++   G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + +  +Y  LI G    G  ++     ++M   G+ P + T+N LI   C EGKV E  K
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L   M    +  ++VTYN+LI G C    +  A  L   M   G  P+VI+YN LI+G+ 
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              + ++A +L+N++   G+ P+V+TY+ L++    AG    A  L   M+  GI  +  
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY I +D   ++D + +A ++++ ++ S F  ++     LI GLC  G ++ A +LF  +
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                EPN V Y +MI G+C+EG   +A  L+ +M   G  P+I +Y++ +    +  K 
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546

Query: 542 PEAEVLLNQMLKLGLKP 558
            E   LL++M +  + P
Sbjct: 547 EEVVQLLHRMAQKDVSP 563



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 143/267 (53%), Gaps = 1/267 (0%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M++SG+ P   T+NSL+  F +         LF S      E DV S+ +LI G  +   
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +A ++ N++  +G  PNV+ Y SL+ G    G ++ AK LF  +   G+    +TY +
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 430

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            + GL KN    +  + + +++ +     +   NCLI   C  GK+   ++LF+++ +  
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NVVTY  +I G C+E +V +A  L+ +M+  G +P++ITYN L+ GF ++ + ++  
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           +L +++     SP  +T ++++   SK
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSK 577



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 36/233 (15%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSEN 167
           Y+S++     +   D A   F  M   G+   S T+   L  + K+ C F+   LF    
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               +L++ +   LI G C+AG L  A+E+  +L   G  PNVV YT +I G C+ G ++
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A +L +                                   KM+ NG +P + TYN L+
Sbjct: 513 KANVLIQ-----------------------------------KMEANGCTPDIITYNTLM 537

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             +    K+ E  +L   M  ++V+ + +T + ++  L K+ + QE   LL +
Sbjct: 538 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR 590


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 238/467 (50%), Gaps = 13/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++DA  K+   D+AL   H M   G  P   TFNS++  + KS    + +  F +  
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K  L  D  ++  LI G    G   +A  +L+ + +    P+   +   I+G  K GD+
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDV 548

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA  ++ ++ EL LV  + T+ +LI G  K G  +     +E+M    + P + T+  L
Sbjct: 549 SRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G+V     + D M +  V  NVVTYN L+ GLCK  R++EA + L++M  +G 
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 668

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ ITY  L+   C A  TD A +L ++LKS G  P  VTYN+L+    K+G ++ A  
Sbjct: 669 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAIT 728

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ---KSGFSPDVYTYGVLIH 463
           ++ EM  +G  P  VTY  LIDS  ++ D+E+A  ++  M         P+V TY VLI+
Sbjct: 729 VLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLIN 788

Query: 464 GLCMKGNMKEASKLFNSMWETKLE--PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           GLC  G + EA +L   M     +  PN + YN  + G CK+     A  L+  + +  L
Sbjct: 789 GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSL 848

Query: 522 --VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              P+  ++S+ I  LC+ G+  EA  + + M+  G  P+V  YN+L
Sbjct: 849 RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVL 895



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 253/560 (45%), Gaps = 115/560 (20%)

Query: 119  SRLSD--QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
            S+L D  +AL  +++ML+  + P   TFN L+    K+ +F++    F E   K ++ DV
Sbjct: 543  SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 176  YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
             +FG LI G C+AG +  A ++L+ +  +G  PNVV Y +L+ G CK+G IE A     +
Sbjct: 603  MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 236  IGELGLVATQ-----------------------------------HTYTVLICGLFKNGL 260
            +   G V                                       TY +L+ GL+K+G 
Sbjct: 663  MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 261  QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC---NVVT 317
             +      E+M   G  P + TYN LI   C  G + E  +L  +M  R   C   NVVT
Sbjct: 723  TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 318  YNTLICGLCKEMRVQEAERLLDQM--KMAGISPNVITYNK-------------------- 355
            Y+ LI GLCK  R+ EA  L+ +M  K   + PN+ITYN                     
Sbjct: 783  YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 356  -----------------LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                             LIDG C  G+TD+A  +F+ + + G  P+VVTYNVL+    K 
Sbjct: 843  LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 399  GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
               + A  ++  M ++G+TP  +TY++L+D+F ++  +++A E+   M   G +P+V T+
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962

Query: 459  GVLIHGLCMKGNMKEASKLFNSM------------------------WETKLE------- 487
              +I GLC      EA ++F+ M                        W  + E       
Sbjct: 963  NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP 1022

Query: 488  -PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
             P+   +N  I G  K G+  RAL  + E+    LVP+  +++  I   C+ G + +A  
Sbjct: 1023 DPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASA 1079

Query: 547  LLNQMLKLGLKPSVSLYNIL 566
            L  +M+   L+P V  +  L
Sbjct: 1080 LFEEMVAKNLQPDVMTFGAL 1099



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 273/591 (46%), Gaps = 58/591 (9%)

Query: 31  LFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
            ++WA+   G +HT  S +  L LL+    S S A A  L    +  R   + FT  +LL
Sbjct: 97  FYDWAAALPGFKHTIFSFNKYLNLLVK---SGSPAKAIDLFRSRLPPRCRPNHFTYSTLL 153

Query: 90  CHLTQ----------LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH-QMLDSGVR 138
               +           F    +       Y  ++ +  ++  + +AL  F  +M   GV 
Sbjct: 154 RATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVA 213

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCCEAGDLNKA 194
           P   T+N+++  + KS     G   F E    VE     DV ++  LI   C+AGDL +A
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEE---LVERGHHPDVVTYNTLIDSLCKAGDLEEA 270

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE--LGLVATQHTYTVLI 252
             +   +      PNVV Y+ LI+G CK G I+ A+ L +++      ++    TY   +
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330

Query: 253 CGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            GL K  +  +  E    ++     VSP   T++ LI   C  G++ E   +FD+M    
Sbjct: 331 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 390

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NV+TYN L+ GLCK  +++ A  +++ M   G++P+VITY+ L+D FC A   D+A 
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME-ERGITPSEVTYTILIDS 429
            L + + S G +P+VVT+N +I    K+  S  A  +  +M  + G+ P ++TY  LID 
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDG 510

Query: 430 FVRSD-------------------------------DMEKAFEMYSLMQKSGFSPDVYTY 458
             R+                                D+ +A ++Y+ M +    PD  T+
Sbjct: 511 LFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LI G C  GN ++AS LF  M    L+P+ + +  +I G CK G    A  +L  M  
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G+ PN+ +Y++ +  LC+ G+  EA   L +M+  G  P    Y  L  A
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 235/469 (50%), Gaps = 37/469 (7%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++    KS   ++A  +  +M+ SG  P S T+ SL+  + ++   D      SE +
Sbjct: 640  YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 169  C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                + D  ++ IL+ G  ++G   +A  VL ++   G  P+VV Y +LID  CK GD+E
Sbjct: 700  SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759

Query: 228  RAKMLFRKIGEL---GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYT 282
             A+ L   +        V    TY+VLI GL K G   +  E  ++M      V P++ T
Sbjct: 760  EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 283  YNCLIHEYCNEGKVSEGFKLFDEMRHR--EVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            YN  +   C +  ++E  +L   +R     V+ + VT++TLI GLCK  +  EA  + D 
Sbjct: 820  YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 341  MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            M   G  PNV+TYN L++G C   + ++A  +   +   G +P V+TY+VL+ AF KA +
Sbjct: 880  MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 401  SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ-KSGFSPDVYTYG 459
               A +L+  M  RG TP+ VT+  +ID   +SD   +AF+M+  M  K G +PD  TY 
Sbjct: 940  VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999

Query: 460  VLIHGL--------------------------CMKG--NMKEASKLFNSMWETKLEPNDV 491
             LI GL                          C+ G   + + S+  + M E +L P+ V
Sbjct: 1000 TLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKV 1059

Query: 492  VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
             +N++I G CK GN  +A  L  EM  K L P++ ++ + I  LC+ G+
Sbjct: 1060 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 39/402 (9%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
            Y  ++D   KS  ++QA+    +M+  G  P   T+N+L+  + K+   ++      +  
Sbjct: 710  YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769

Query: 167  ---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL--EEMGFSPNVVIYTSLIDGCC 221
               +RC V  +V ++ +LI G C+ G +++A E++ ++  +     PN++ Y S +DG C
Sbjct: 770  SRVSRCCVP-NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828

Query: 222  KNGDIERAKMLFRKI--GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            K   +  A  L R +  G L +     T++ LI GL K G   +    ++ M   G  P+
Sbjct: 829  KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 280  LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
            + TYN L++  C   K+     + + M  + V  +V+TY+ L+   CK   V EA  LL 
Sbjct: 889  VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 340  QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK-SNGQSPSVVTYNVLIRAFSKA 398
             M   G +PNV+T+N +IDG C + ++ +AF++F+ +   +G +P  +TY  LI    + 
Sbjct: 949  GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008

Query: 399  GNSKMASDLVREME----------------------------ERGITPSEVTYTILIDSF 430
            G +  A  L+  M                             E  + P +VT+ ILI   
Sbjct: 1009 GWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGA 1068

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             ++ + E+A  ++  M      PDV T+G LI GLC  G ++
Sbjct: 1069 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 155/346 (44%), Gaps = 40/346 (11%)

Query: 264 GFEFYE-KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           G +FY+    L G   +++++N  ++     G  ++   LF          N  TY+TL+
Sbjct: 94  GTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLL 153

Query: 323 CGLCKE-------------------------------MRVQEAERLLD----QMKMAGIS 347
               K                                 R  E  R L+    +M   G++
Sbjct: 154 RATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVA 213

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P ++TYN +I+G C + E      LF +L   G  P VVTYN LI +  KAG+ + A  L
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS--PDVYTYGVLIHGL 465
             +M  R   P+ VTY++LI+   +   +++A E+   M +      P++ TY   + GL
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333

Query: 466 CMKGNMKEASKLFNSMWETKLE--PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           C +    EA +L  S+ +  L   P+ V ++ +I G CK G    A  +  +M   G VP
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 393

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N+ +Y++ +  LC+  K   A  ++  M+  G+ P V  Y++L  A
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 439


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 221/423 (52%), Gaps = 1/423 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + T N+L+  +       K   F  +   +  ++D  S+  L+ G C+ G
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A ++L  +E+    PNVV+Y ++IDG CK+  +  A  L+ ++   G+     TY+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G    G   + F    +M L  ++P++YTY  L+   C EGKV E   L   M   
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  NVV+YNTL+ G C    VQ A+++   M   G++PNV +YN +ID  C +   D+A
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  ++      P+ VTY+ LI  F K G    A DL++EM  RG     VTYT L+D+
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++ +++KA  ++  M++ G  P+ YTY  LI GLC  G  K A KLF  +       N
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRIN 429

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN+MI G CKEG    AL +  +M E G +P+  ++   I  L +  +  +AE LL+
Sbjct: 430 VWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLH 489

Query: 550 QML 552
           +M+
Sbjct: 490 EMI 492



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 239/467 (51%), Gaps = 11/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           +  I+ + +K +    A+  F QM   G+ P   T N L+     +C    G + FS   
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILI-----NCFCHLGQMTFSFTV 67

Query: 168 -----RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                +   + +  +   L+KG C  G++ K+    +++   GF  + V Y +L++G CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G+   A  L R I +         Y  +I GL K+ L  + ++ Y +M   G+ P++ T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ LI+ +C  G++ E F L +EM  + +  NV TY  L+  LCKE +V+EA+ LL  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PNV++YN L+DG+C  GE   A ++F+ +   G +P+V +YN++I    K+    
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A +L+RE+  + + P+ VTY+ LID F +   +  A ++   M   G   DV TY  L+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             LC   N+ +A+ LF  M E  ++PN   Y  +I G CK G    A +L   +  KG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            N+ +Y+  I  LC++G   EA  + ++M + G  P    + I+ R+
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 182/363 (50%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           +P ++ +  ++    K      A  LF+++   G+     T  +LI      G     F 
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
              K+   G  P+  T N L+   C +G+V +     D++  +    + V+Y TL+ GLC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K    + A +LL  ++     PNV+ YN +IDG C     ++A+ L++++ + G  P+V+
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY+ LI  F  AG    A  L+ EM  + I P+  TYTIL+D+  +   +++A  + ++M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            K G  P+V +Y  L+ G C+ G ++ A ++F++M +  + PN   YN+MI   CK    
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A+ LL E+  K +VPN  +YSS I   C+ G+   A  LL +M   G    V  Y  L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 567 YRA 569
             A
Sbjct: 367 LDA 369



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 5/172 (2%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S+ID   K      AL    +M   G      T+ SLL  + K+ + DK 
Sbjct: 320 NMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKA 379

Query: 161 WLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
              F + + + ++ + Y++  LI G C+ G    A ++   L   G   NV  Y  +I G
Sbjct: 380 TALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG 439

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            CK G ++ A  +  K+ E G +    T+ ++I  LF    +KD  +  EK+
Sbjct: 440 LCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLF----EKDQNDKAEKL 487


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/435 (33%), Positives = 220/435 (50%), Gaps = 12/435 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR----CK--VELDVYSFGILIKG 184
           +M + G+ P + T N +L       +   G +  +EN     C+  V  D  SF +++  
Sbjct: 179 EMQNQGLVPSTQTLNCVL-----DVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVA 233

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           CC  G + +A   LN + E GF  +    T +ID  C+ G + R    F K+ E+GL   
Sbjct: 234 CCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPN 293

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              +T LI GL K G  K  FE  E+M   G  P++YT+  LI   C +G   + F+LF 
Sbjct: 294 VINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFL 353

Query: 305 EM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           ++ R      NV TY  +I G CKE ++  AE LL +M+  G+ PN  TY  LIDG C  
Sbjct: 354 KLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +A+ L + +   G SP++ TYN +I    K G+   A  L+ ++   G+    VTY
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           TIL+    R  D  ++   ++ M K GF+PD+++Y  LI   C +  MKE+ +LF     
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVS 533

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L P    Y  MI GYC+ GN+  A++L   M+  G  P+  +Y + I  LC++ K  +
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 544 AEVLLNQMLKLGLKP 558
           A  L + M+  GL P
Sbjct: 594 ARNLYDAMMDKGLSP 608



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 202/378 (53%), Gaps = 1/378 (0%)

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E G L +A  ++ +++  G  P+      ++D     G +E A+ +F ++ + G+     
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           ++ +++      G   +   +   M   G      T   +I  +C +G V+     F +M
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +A NV+ +  LI GLCK+  +++A  LL++M   G  PNV T+  LIDG C  G T
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 367 DKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           +KAFRLF +L +S+G  P+V TY  +I  + K      A  L+  M+E+G+ P+  TYT 
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID   +  +  +A+E+  LM K GFSP++YTY  +I GLC KG++ EA +L N +    
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L+ + V Y +++  +C++ ++ R+L    +M + G  P+I SY++ I   C+  +  E+E
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 546 VLLNQMLKLGLKPSVSLY 563
            L  + + LGL P+   Y
Sbjct: 526 RLFEEAVSLGLIPTKKTY 543



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 216/442 (48%), Gaps = 38/442 (8%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           IIDA  +    ++ + YF +M++ G+ P                                
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAP-------------------------------- 292

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             +V +F  LI G C+ G + +AFE+L ++   G+ PNV  +T+LIDG CK G  E+A  
Sbjct: 293 --NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 232 LFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           LF K +   G     HTYT +I G  K            +MQ  G+ P+  TY  LI  +
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G     ++L D M     + N+ TYN +I GLCK+  + EA RLL+++ + G+  + 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  L+   C   +T+++   FN++   G +P + +Y  LI  F +    K +  L  E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEE 530

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
               G+ P++ TYT +I  + R  +   A +++  M   G +PD  TYG LI GLC +  
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A  L+++M +  L P +V    + + YCK+ +S  A+ +L  + ++  +  +   ++
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NT 647

Query: 531 TIGVLCQDGKWPEAEVLLNQML 552
            +  LC +GK   A +  +++L
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLL 669



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 165/332 (49%), Gaps = 1/332 (0%)

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           IG   L         ++    +NG  K+      +MQ  G+ PS  T NC++      G 
Sbjct: 145 IGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGL 204

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V     +F EM  R V+ + V++  ++   C   RV EAER L+ M   G   +  T   
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTL 264

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID FC  G  ++    F ++   G +P+V+ +  LI    K G+ K A +L+ EM  RG
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
             P+  T+T LID   +    EKAF ++  L++  G+ P+V+TY  +I+G C +  +  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L + M E  L PN   Y  +I G+CK GN  RA  L+  M ++G  PNI +Y++ I  
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+ G   EA  LLN++   GL+     Y IL
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 8/313 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y ++ID H K     +A      M   G  P   T+N+++  + K  S D+ + 
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             ++     ++ D  ++ IL+   C   D N++    N++ ++GF+P++  YT+LI   C
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC 516

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +   ++ ++ LF +   LGL+ T+ TYT +ICG  + G      + +++M  +G +P   
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI   C E K+ +   L+D M  + ++   VT  TL    CK+     A  +LD++
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +       + T N L+   C  G+ D A   F++L    + P+V    V +  F      
Sbjct: 637 EKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLD--KEPNV--NRVTLLGFMNKCYE 689

Query: 402 KMASDLVREMEER 414
                LV E+ ER
Sbjct: 690 SNKYGLVSELSER 702


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 256/518 (49%), Gaps = 7/518 (1%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSR 107
           ++++L+++M    H     ++   +        F      +L  L  LF   ++ V  + 
Sbjct: 96  LMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNH 155

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           L   +++   K +L +     + +M + G++P   TFN+L+  + ++       L   E 
Sbjct: 156 LLNVLVEGS-KMKLLETV---YSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   V  D  +F  L++G  E G +  A  V  ++ EMG SP  V    LI+G CK G +
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A    ++    G    Q TY   + GL +NG      +  + M   G  P ++TYN +
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C  G++ E   + ++M  R    ++ T+NTLI  LC   R++EA  L  Q+ + G+
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP+V T+N LI+  C  G+   A RLF ++KS+G +P  VTYN LI      G    A D
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L++EME  G   S VTY  +ID   +   +E+A E++  M   G S +  T+  LI GLC
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + +A++L + M    L+PN++ YN ++  YCK+G+  +A  +L  M   G   ++ 
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +Y + I  LC+ G+   A  LL  M   G++ +   YN
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYN 609



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 229/462 (49%), Gaps = 3/462 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDS--GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +  S ++++ + +L   A+      LD   G++  +  +N LL  +++          +S
Sbjct: 115 VVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYS 174

Query: 166 E-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E     ++ DV +F  L+K  C A  +  A  +L ++   G +P+   +T+L+ G  + G
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ A  +  ++ E+G   T+ T  VLI G  K G  +D   + ++   NG  P   TYN
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYN 294

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             ++  C  G V    K+ D M       +V TYN ++  LCK  +++EA+ +L+QM   
Sbjct: 295 TFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++ T+N LI   C     ++A  L  Q+   G SP V T+N+LI A  K G+ ++A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  EM+  G TP EVTY  LID+      + KA ++   M+ +G      TY  +I G
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDG 474

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC K  ++EA ++F+ M    +  N + +N +I G CK+     A +L+ +M  +GL PN
Sbjct: 475 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPN 534

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +Y+S +   C+ G   +A  +L  M   G +  V  Y  L
Sbjct: 535 NITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 225/471 (47%), Gaps = 2/471 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           SSS        + +++   ++      AL    +ML+ G  P   T N L+    K    
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +    +  +      E D  ++   + G C+ G +  A +V++ + + G  P+V  Y  +
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++  CKNG +E AK +  ++ E G +    T+  LI  L      ++  +   ++ L G+
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP +YT+N LI+  C  G      +LF+EM+      + VTYNTLI  LC   ++ +A  
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL +M+ AG   + +TYN +IDG C     ++A  +F+Q+   G S + +T+N LI    
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K      A+ L+ +M   G+ P+ +TY  ++  + +  D++KA ++   M  +GF  DV 
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TYG LI+GLC  G  + A KL   M    +      YN +I    +  N+  A+ L  EM
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631

Query: 517 NEKGLVPNIASYSSTIGVLCQ-DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            E G  P+  +Y      LC+  G   EA   L +M+  G  P  S + +L
Sbjct: 632 TEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRML 682



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 198/412 (48%), Gaps = 8/412 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   K+   ++A    +QM++ G  P   TFN+L++ +      ++      +  
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  DVY+F ILI   C+ GD   A  +  +++  G +P+ V Y +LID  C  G + 
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLG 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L +++   G   +  TY  +I GL K    ++  E +++M L G+S +  T+N LI
Sbjct: 448 KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 507

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + ++ +  +L  +M    +  N +TYN+++   CK+  +++A  +L  M   G  
Sbjct: 508 DGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE 567

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A +L   ++  G   +   YN +I++  +  N++ A +L
Sbjct: 568 VDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNL 627

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD-DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P   TY I+     R    + +AF+    M   GF P+  ++ +L  GL 
Sbjct: 628 FREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMM--IFGYCKEGNSYRALRLLGEM 516
             G        F    E  +E  D+  + +  I GY K    Y AL   G +
Sbjct: 688 NLG----MDDYFIRAIEIIIEKADLGDSDVSAIRGYLKIRKFYDALATFGRL 735



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 135/259 (52%)

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  + V YN L+  L +  +++  E +  +M   GI P+V+T+N L+   C A +   A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  ++ S+G +P   T+  L++ F + G+ K A  +   M E G +P++VT  +LI+ +
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +E A         +GF PD  TY   ++GLC  G++  A K+ + M +   +P+ 
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN+++   CK G    A  +L +M E+G +P+I ++++ I  LC   +  EA  L  Q
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 551 MLKLGLKPSVSLYNILYRA 569
           +   GL P V  +NIL  A
Sbjct: 386 VTLKGLSPDVYTFNILINA 404


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 229/434 (52%), Gaps = 2/434 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
           +R+SD A+    QM++ G +P S TFN+L+  + +     +          K  + D+ +
Sbjct: 165 NRISD-AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +GI++ G C+ GD++ A  +L ++E+    P VVIY ++ID  C   ++  A  LF ++ 
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     TY  LI  L   G   D       M    ++P++ T++ LI  +  EGK+ 
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      PNV+TYN LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GFC A   D+   LF ++   G   + VTY  LI  F +A     A  + ++M   G+ 
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  +TY+IL+D    +  +E A  ++  +Q+S   PD+YTY ++I G+C  G +++   L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F S+    ++PN V Y  M+ G+C++G    A  L  EM E+G +P+  +Y++ I    +
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583

Query: 538 DGKWPEAEVLLNQM 551
           DG    +  L+ +M
Sbjct: 584 DGDKAASAELIREM 597



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 234/453 (51%), Gaps = 2/453 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVY 176
           +S+LS  AL    +M+  G  P   T NSLL  F   +   D   L         + D +
Sbjct: 129 RSQLS-LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G       ++A  +++++   G  P++V Y  +++G CK GDI+ A  L +K+
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +  +      Y  +I  L       D    + +M   G+ P++ TYN LI   CN G+ 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           S+  +L  +M  R++  NVVT++ LI    KE ++ EAE+L D+M    I P++ TY+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+GFC     D+A  +F  + S    P+VVTYN LI+ F KA       +L REM +RG+
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + VTYT LI  F ++ + + A  ++  M   G  PD+ TY +L+ GLC  G ++ A  
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  +  +K+EP+   YN+MI G CK G       L   ++ KG+ PN+ +Y++ +   C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   EA+ L  +M + G  P    YN L RA
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 215/445 (48%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D A+  F  M+ S   P    F+ LL  + K   FD       +     +  ++Y++ IL
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    L+ A  VL ++ ++G+ P++V   SL++G C    I  A  L  ++ E+G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T+  LI GLF++    +     ++M + G  P L TY  +++  C  G +     
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  +M   ++   VV YNT+I  LC    V +A  L  +M   GI PNV+TYN LI   C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           + G    A RL + +     +P+VVT++ LI AF K G    A  L  EM +R I P   
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY+ LI+ F   D +++A  M+ LM      P+V TY  LI G C    + E  +LF  M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  L  N V Y  +I G+ +      A  +  +M   G++P+I +YS  +  LC +GK 
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A V+   + +  ++P +  YNI+
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIM 507



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IIDA    +  + AL  F +M + G+RP   T+NSL+  +   C++    D   L 
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL---CNYGRWSDASRLL 314

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  +V +F  LI    + G L +A ++ +++ +    P++  Y+SLI+G C +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY  LI G  K     +G E + +M   G+  +  TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LIH +    +      +F +M    V  +++TY+ L+ GLC   +V+ A  + + ++ 
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P++ TYN +I+G C AG+ +  + LF  L   G  P+VVTY  ++  F + G  + 
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L REM+E G  P   TY  LI + +R  D   + E+   M+   F  D  T G++ +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614

Query: 464 GL 465
            L
Sbjct: 615 ML 616



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 144/289 (49%)

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           Y Y  +     N+ K+ +   LF +M       ++V ++ L+  + K  +      L +Q
Sbjct: 47  YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  GIS N+ TY+ LI+ FC   +   A  +  ++   G  P +VT N L+  F     
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  LV +M E G  P   T+  LI    R +   +A  +   M   G  PD+ TYG+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +++GLC +G++  A  L   M + K+EP  V+YN +I   C   N   AL L  EM+ KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + PN+ +Y+S I  LC  G+W +A  LL+ M++  + P+V  ++ L  A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D    +   + AL  F  +  S + P   T+N ++  + K+   + GW LF S +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V ++  ++ G C  G   +A  +  +++E G  P+   Y +LI    ++GD  
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            +  L R++     V    T  ++   L    L K
Sbjct: 589 ASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDK 623


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 274/551 (49%), Gaps = 50/551 (9%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           ++L P      + W  +       + IS+ L L    + S ++A   + I   + G + +
Sbjct: 77  SELNPDLCLRYYTWLVKN------RDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRN 130

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
            S      + H   +     N    S + + ++ A+  +   +     F +    G +  
Sbjct: 131 GSDHQVHSIFHAISM---CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187

Query: 141 SNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           + +   L++ ++K + S D  +L+    R K++ +V++F ++I   C+ G +NKA +V+ 
Sbjct: 188 AMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247

Query: 200 QLEEMGFSPNVVIYTSLIDGCCK---NGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
            ++  G+SPNVV Y +LIDG CK   NG + +A  + +++ E                  
Sbjct: 248 DMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE------------------ 289

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                            N VSP+L T+N LI  +  +  +    K+F EM  ++V  NV+
Sbjct: 290 -----------------NEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVI 332

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYN+LI GLC   ++ EA  + D+M  AG+ PN+ITY+ LI+GFC  G   +A  +F+ +
Sbjct: 333 TYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSV 392

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K  G  P+   YN+LI A+ K G       L  EME  GI P   TY  LI    R+ ++
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           E A +++  +   G  PD+ T+ +L+ G C +G  ++A+ L   M +  L+P  + YN+M
Sbjct: 453 EAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511

Query: 497 IFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           + GYCKEGN   A  +  +M  E+ L  N+ASY+  +    Q GK  +A +LLN+ML+ G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 556 LKPSVSLYNIL 566
           L P+   Y I+
Sbjct: 572 LVPNRITYEIV 582



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 167/301 (55%), Gaps = 2/301 (0%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ +F ILI G  +  +L  + +V  ++ +    PNV+ Y SLI+G C  G I  A
Sbjct: 291 EVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEA 350

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +  K+   G+     TY  LI G  KNG+ K+  + ++ ++  G  P+   YN LI  
Sbjct: 351 IGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  GK+ +GF L +EM    +  +V TYN LI GLC+   ++ A++L DQ+   G+ P+
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PD 469

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           ++T++ L++G+C  GE+ KA  L  ++   G  P  +TYN++++ + K GN K A+++  
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRT 529

Query: 410 EME-ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           +ME ER +  +  +Y +L+  + +   +E A  + + M + G  P+  TY ++   +  K
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDK 589

Query: 469 G 469
           G
Sbjct: 590 G 590



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 187/393 (47%), Gaps = 38/393 (9%)

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT-VLICGLFKNGLQKDGFEFYEKMQL 273
           S +DG  +NG   +   +F  I     V        +L+     N   + GFE +++   
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G   S  +   L+     + + ++   L+ EM  R++  NV T+N +I  LCK  ++ +
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNV 390
           A  +++ MK+ G SPNV++YN LIDG+C  G   K ++   +  ++  N  SP++ T+N+
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F K  N   +  + +EM ++ + P+ +TY  LI+       + +A  M   M  +G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P++ TY  LI+G C  G MKEA  +F+S+      P   +YNM+I  YCK G      
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGK---------------WPE------------ 543
            L  EM  +G+VP++ +Y+  I  LC++G                 P+            
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYC 481

Query: 544 -------AEVLLNQMLKLGLKPSVSLYNILYRA 569
                  A +LL +M K+GLKP    YNI+ + 
Sbjct: 482 SRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           + F    ++     +F S     T+  +R+Y  +IDA+ K    D       +M   G+ 
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P   T+N L+  + ++ + +     F +   K   D+ +F IL++G C  G+  KA  +L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLL 493

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GELGLVATQHTYTVLICGLFK 257
            ++ +MG  P  + Y  ++ G CK G+++ A  +  ++  E  L     +Y VL+ G  +
Sbjct: 494 KEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G  +D      +M   G+ P+  TY  +  E  ++G V +
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 248/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   ++A  +   M D G+ P   T+ +L+  + KS   ++      E  
Sbjct: 260 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 319

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C +++ +V  +  LI G    G+ ++AF+++ ++   G  PN + Y +L+ G CK G ++
Sbjct: 320 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 379

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA +L +++          TY ++I G F++  +KD F    +M+  G+SP++YTY+ +I
Sbjct: 380 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 439

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G+  +   L +EM  + +  N   Y  LI G C+E  V  A  + D+M    + 
Sbjct: 440 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 499

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  YN LI G    G  +++ + F Q++  G  P+  TY+ LI  + K G+ + A  L
Sbjct: 500 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 559

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK----------------------------- 438
           V+ M + G+ P++V Y  L++S+ +SDD+EK                             
Sbjct: 560 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 619

Query: 439 ------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                 AF + S ++K+G  PDV+ Y  LI GLC   + ++A  + + M +  ++PN V 
Sbjct: 620 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK G+   A  +   +  KGLVPN  +Y+S I   C+ G    A  L N+ML
Sbjct: 680 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 739

Query: 553 KLGLKPSVSLYNIL 566
             G+ P   +Y++L
Sbjct: 740 ATGITPDAFVYSVL 753



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 246/494 (49%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + S ++A+ K R  D A     +M + G    + T+N L+  + +S + ++ + F  +  
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------- 218
              +  D +++G LI G C++   N+A  +L+++      PNVV+Y +LID         
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 219 --------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                                     G CK G ++RA +L +++          TY ++I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G F++  +KD F    +M+  G+SP++YTY+ +IH  C  G+  +   L +EM  + + 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N   Y  LI G C+E  V  A  + D+M    + P++  YN LI G    G  +++ + 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F Q++  G  P+  TY+ LI  + K G+ + A  LV+ M + G+ P++V Y  L++S+ +
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           SDD+EK    +  M   G   D   YG+LIH L   GNM+ A ++ + + +    P+  V
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y+ +I G CK  +  +A  +L EM++KG+ PNI  Y++ I  LC+ G    A  + N +L
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 704

Query: 553 KLGLKPSVSLYNIL 566
             GL P+   Y  L
Sbjct: 705 AKGLVPNCVTYTSL 718



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 222/460 (48%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID  ++   +D+A     +M+ +GV+P   T+++L+  + K    D+  L   + 
Sbjct: 329 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 388

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     D  ++ ++I+G         AF +L+++E  G SPNV  Y+ +I G C++G+ 
Sbjct: 389 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 448

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L  ++   GL      Y  LI G  + G      E ++KM    V P LY YN L
Sbjct: 449 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 508

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G+V E  K F +M+ R +  N  TY+ LI G  K   ++ AE+L+ +M   G+
Sbjct: 509 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + Y  L++ +  + + +K    F  +   G       Y +LI   S +GN + A  
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++  +E+ G  P    Y+ LI    ++ D EKAF +   M K G  P++  Y  LI GLC
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++  A  +FNS+    L PN V Y  +I G CK G+   A  L  EM   G+ P+  
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS         G   +A  L+ +M   G   S+S +N L
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNL 787



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 231/482 (47%), Gaps = 24/482 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  + +      A   F +M    V P    +NSL+  + K    ++   +F++ 
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + +  L + +++  LI G  + GDL  A +++ ++ + G  PN VIY  L++   K+ DI
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+    F+ + + G++     Y +LI  L  +G  +  F     ++ NG  P ++ Y+ L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C      + F + DEM  + V  N+V YN LI GLCK   +  A  + + +   G+
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY  LIDG C  G+   AF L+N++ + G +P    Y+VL    S AG+ + A  
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM  RG   S  ++  L+D F +   M++  ++  ++   G  P+  T   +I GL 
Sbjct: 769 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 827

Query: 467 MKGNMKEASKLFNSMWETKLE-------------------PNDVVYNMMIFGYCKEGNSY 507
             G + E   +F  + +   E                   P DVV +M I  +CKEGN  
Sbjct: 828 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM-IRDHCKEGNLD 886

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPS-VSLYNI 565
           +AL L   +  K      +SY + +  LC+ GK  EA  LL +M K G L+P+ V+L  I
Sbjct: 887 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGI 946

Query: 566 LY 567
            +
Sbjct: 947 FW 948


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 280/558 (50%), Gaps = 36/558 (6%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           +LP L A  L +   R+G++ + Q+ + +L  L S+  S    A+  +   +I  R+  +
Sbjct: 149 RLPHLAAQLLHSLRRRRGVRPSLQAANAVLSAL-SRSPSTLPQASLDVFRSLIELRLHPN 207

Query: 82  SFTPRSLLCHL----------------TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
            +T  +LL H                  Q F  S + VT    Y ++++AH +  +  +A
Sbjct: 208 HYT-FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT----YNTLLNAHCRKGMLGEA 262

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWL------FFSENRCKVELDVYSF 178
                +M   G+ P   T+N+L+       +F + GW+        S      E D+ ++
Sbjct: 263 RALLARMKRDGIAPTQPTYNTLV------SAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
            +L  G C+AG +++AF + +++E +G + P+VV Y +L+D C K      A  L  ++ 
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G+  T  T+ +++  L K G  ++     EK+   G++P + TYN LI  YC  G V+
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           + F L DEM  + +  +  T NT++  LCK  R ++AE LL      G  P+ ++Y  ++
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVM 496

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             +      + A RL++Q+      PS+ TYN LI+   +    K A D + E  E+G+ 
Sbjct: 497 AAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLV 556

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P E TY I+I ++ +  D+E AF  ++ M ++ F PDV T   L++GLC+ G + +A KL
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F S  E   + + + YN +I   CK G+   AL    +M  KGL P+  +Y+  +  L +
Sbjct: 617 FESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676

Query: 538 DGKWPEAEVLLNQMLKLG 555
            G+  EA  +L+++   G
Sbjct: 677 AGRSEEAHNMLHKLADSG 694



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 186/374 (49%), Gaps = 36/374 (9%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +FR + EL L    +T+ +L+      G   D       MQ  G+SP   TYN L++ +C
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHC 254

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G + E   L   M+   +A    TYNTL+    +   +++A ++++ M   G  P++ 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           TYN L  G C AG+ D+AFRL ++++  G + P VVTYN L+ A  K   S  A  L+ E
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++G+ P+ VT+ I++ S  +   +E+A      + + G +PDV TY  LI   C  GN
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 471 MKEASKLFNSM------------------------WETKLE-----------PNDVVYNM 495
           + +A  L + M                        +E   E           P++V Y  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++  Y KE N   ALRL  +M E+ L+P+I++Y++ I  LC+  +  EA   LN+ ++ G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554

Query: 556 LKPSVSLYNILYRA 569
           L P  + YNI+  A
Sbjct: 555 LVPDETTYNIIIHA 568



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 198/440 (45%), Gaps = 55/440 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSEN 167
           Y +++DA  K R S  AL    +M D GV+P   T N     V+KS C   K      E 
Sbjct: 352 YNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN----IVVKSLCKEGK----LEEA 403

Query: 168 RCKVE--------LDVYSFGILIKGCCEAGDLNKAFEVLNQL------------------ 201
             K+E         DV ++  LI   C+AG++ KAF +++++                  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 202 ----------EEM-------GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                     EE+       GF P+ V Y +++    K  + E A  L+ ++ E  L+ +
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY  LI GL +    K+  +   +    G+ P   TYN +IH YC EG +   F+  +
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           +M       +VVT NTL+ GLC   ++ +A +L +     G   +VITYN LI   C  G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D A   F+ ++  G  P   TYNV++ A S+AG S+ A +++ ++ + G         
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACP 703

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPD--VYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +L  S     D+ K  E     + S  + D  + TY   ++GLC  G +KEA  + + M 
Sbjct: 704 LLKPSSADEADV-KEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMM 762

Query: 483 ETKLEPNDVVYNMMIFGYCK 502
           +  +  +   Y  ++ G  K
Sbjct: 763 QKGMPVDCSTYITLMEGLIK 782


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 253/482 (52%), Gaps = 1/482 (0%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           L  L ++  S   P   +  Y  +I    +S     AL  F +M+D GV P   T+N+++
Sbjct: 177 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI 236

Query: 149 IFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
              +K    + G+    +      + +V ++ +L+ G C  G +++   +++++      
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSML 296

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+   Y+ L DG  + G+ +    LF +  + G++   +T ++L+ GL K+G      + 
Sbjct: 297 PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQV 356

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +E +   G+ P+   YN LI+ YC    +   F +F++M+ R +  + +TYN LI GLCK
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              V +AE L+ +M+ +G+ P+V T+N LID +  AG+ +K F + + ++  G    V++
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           +  +++AF K G    A  ++ +M  + + P+   Y  +ID+++ S D E+A  +   M+
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            SG S  + TY +L+ GLC    + EA +L  ++    L P+ V YN +I   C +G++ 
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +AL LL EMN+ G+ P + +  + +  L   G+  + E L  QML   ++PS S+Y I+ 
Sbjct: 597 KALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656

Query: 568 RA 569
            A
Sbjct: 657 DA 658



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 36/450 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--------- 159
           Y ++ID H+K    +       QML  G +P   T+N LL  + ++   D+         
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMA 291

Query: 160 -------GWLF-------------------FSENRCK-VELDVYSFGILIKGCCEAGDLN 192
                  G+ +                   F+E+  K V L  Y+  IL+ G C+ G + 
Sbjct: 292 SHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 351

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA +V   L   G  P  VIY +LI+G C+  D+  A  +F ++    +     TY  LI
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K  +     +   +M+ +GV PS+ T+N LI  Y   G++ + F +  +M+ + + 
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+++ +++   CK  ++ EA  +LD M    ++PN   YN +ID + ++G+T++A  L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLL 531

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++K++G S S+VTYN+L++   ++     A +L+  +  +G+ P  V+Y  +I +   
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D +KA E+   M K G  P + T   L+  L   G + +   L+  M    +EP+  +
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           Y +M+  Y +  N  +   L  EM+EKG+ 
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIA 681



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           +CN++  + L  G  +   V+ A  LL     AG  P+   +NK++     AG+ D A  
Sbjct: 124 SCNLLLESLLFVG--RHADVRAAFGLL---VAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 372 LFNQL-KSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           +  ++ +S G   P   +YNV+I    ++G    A  +  EM + G+ P+ +TY  +ID 
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            V+  D+E  F +   M   G  P+V TY VL+ GLC  G M E   L + M    + P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y+++  G  + G S   L L  E  +KG++    + S  +  LC+DGK  +A+ +  
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 550 QMLKLGLKPSVSLYNIL 566
            ++  GL P+  +YN L
Sbjct: 359 MLVHTGLVPTTVIYNTL 375


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 239/460 (51%), Gaps = 3/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +IID   K++  D A   F +M+D GV+P + T+N+++  + K+ + D+    F +  
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R  V+ D  ++  +I G C+A  ++KA  V  Q+ + G  P+ + YT +IDG CK   +
Sbjct: 323 DR-GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +RA+ +F+++ + G+     TY  LI G    G  ++  +  ++M  + + P ++TY  L
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C  GK +E   LFD M  + +  +V  Y  ++ G  K+  + E   LL+ M   GI
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN   +N +I  +      D+   +F ++K  G SP+VVTY  LI A  K G    A  
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              +M   G+TP+ V +  L+      D  EK  E++  M   G  PD+  +  ++  LC
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G + EA +L +SM    L+P+ + YN +I G+C       A++LL  M   GL PNI 
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           SY++ +   C+ G+   A  L  +ML+ G+ P V  YN +
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 241/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  IID   K++  D+A   F QM+D GV+P + T+N L+   + +  +++      E  
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E DV+++G+L+   C+ G  N+A  + + +   G  P+V IY  ++ G  K G + 
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L   +   G+      +  +IC   K  +  +    + KM+  G+SP++ TY  LI
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547

Query: 288 HEYCNEGKVSEGF-----------------------------------KLFDEMRHREVA 312
              C  G+V +                                     +LF EM ++ + 
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V +NT++C LCKE RV EA RL+D M   G+ P+VI+YN LIDG C A   D+A +L
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P++V+YN L+  + KAG    A  L REM  +G+TP   TY  +++   R
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           S    +A E+Y  M KS     + TY +++ G C      EA K+F S+    L+ + + 
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIIT 787

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI G  K G    A+ L   +   GLVP++ +Y      L ++G   E + L + M 
Sbjct: 788 FNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME 847

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 848 KSGTAPNSHMLNALIR 863



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 242/459 (52%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID   K++  D+A   F QM++ GV+P + T+N+++  + K+   D     F +  
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+    ++  +I G C+A  +++A  V  Q+ + G  P+ V Y ++IDG CK   I+
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A+ +F+++ + G+     TYT++I GL K          +++M   GV P+  TYNCLI
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y + G+  E  +   EM   ++  +V TY  L+  LCK  +  EA  L D M   GI 
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V  Y  ++ G+   G   +   L N + +NG SP+   +N +I A++K         +
Sbjct: 468 PSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHI 527

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M+++G++P+ VTY  LID+  +   ++ A   ++ M   G +P+   +  L++GLC 
Sbjct: 528 FIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCT 587

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
               ++  +LF  M    + P+ V +N ++   CKEG    A RL+  M   GL P++ S
Sbjct: 588 VDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVIS 647

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I   C   +  EA  LL+ M+  GLKP++  YN L
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 230/455 (50%), Gaps = 16/455 (3%)

Query: 124 QALFYFHQMLDSGVRPRS-NTFNSLLIFVIKS-CSFDKGWLFFSENRC------KVELDV 175
            AL  F ++L    RP S    N LL  V ++ CS          NR       KV  D 
Sbjct: 26  DALKLFDELLLHA-RPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDC 84

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI-ERAKMLFR 234
            ++ I+I   C  G L   F     + + G+  + ++   L+ G C    + E   +L R
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR 144

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM---QLNGVSPSLYTYNCLIHEYC 291
           ++ E+G      +Y  L+ GL      ++  E    M   Q +  SP + +YN +I+ + 
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           NEG+V + + LF EM    V+ +VVTYNT+I GLCK   V  AE +  QM   G+ PN +
Sbjct: 205 NEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN +IDG C A E D A  +F ++   G  PS VTYN +I    KA     A  + ++M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+ P  VTY  +ID   ++  ++KA  ++  M   G  PD  TY ++I GLC   ++
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A  +F  M +  ++PN+  YN +I GY   G     ++ + EM+   L P++ +Y   
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  LC++GK  EA  L + M++ G+KPSV++Y I+
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 214/432 (49%), Gaps = 41/432 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           L V S+  L+KG C+     +A E+L+ +   ++   SP+VV Y  +I+G    G +++A
Sbjct: 153 LGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKA 212

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF    E+G+     TY  +I GL K        + +++M   GV P+  TYN +I  
Sbjct: 213 YSLFL---EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDG 269

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C   +V     +F +M  + V  + VTYNT+I GLCK   V  AE +  QM   G+ P+
Sbjct: 270 LCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPD 329

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +TYN +IDG C A   DKA  +F Q+   G  P  +TY ++I    KA +   A  + +
Sbjct: 330 HVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M ++G+ P+  TY  LI  ++ +   E+  +    M      PDV+TYG+L+  LC  G
Sbjct: 390 QMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN------------------------ 505
              EA  LF+SM    ++P+  +Y +M+ GY K+G                         
Sbjct: 450 KCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFN 509

Query: 506 ------SYRA-----LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
                 + RA     + +  +M ++GL PN+ +Y + I  LC+ G+  +A +  NQM+  
Sbjct: 510 TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE 569

Query: 555 GLKPSVSLYNIL 566
           G+ P+  ++N L
Sbjct: 570 GVTPNNVVFNSL 581



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 229/494 (46%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID   K++  D+A   F QM+D GV+P   T+N+++  + K+ + DK    F +  
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN------------------ 209
            K V+ D  ++ I+I G C+A  +++A  V  Q+ + G  PN                  
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417

Query: 210 -----------------VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                            V  Y  L+D  CKNG    A+ LF  +   G+  +   Y +++
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K G   +  +    M  NG+SP+   +N +I  Y     + E   +F +M+ + ++
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVVTY TLI  LCK  RV +A    +QM   G++PN + +N L+ G C   + +K   L
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F ++ + G  P +V +N ++    K G    A  L+  M   G+ P  ++Y  LID    
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  M++A ++   M  +G  P++ +Y  L+HG C  G +  A  LF  M    + P    
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN ++ G  + G    A  L   M +   + +I +YS  +   C++  + EA  +   + 
Sbjct: 718 YNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLC 777

Query: 553 KLGLKPSVSLYNIL 566
            + L+  +  +NI+
Sbjct: 778 SMDLQLDIITFNIM 791



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 192/398 (48%), Gaps = 1/398 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R++ ++I A+ K  + D+ +  F +M   G+ P   T+ +L+  + K    D   L F++
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + V  +   F  L+ G C      K  E+  ++   G  P++V + +++   CK G 
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A+ L   +  +GL     +Y  LI G        +  +  + M   G+ P++ +YN 
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H YC  G++   + LF EM  + V   V TYNT++ GL +  R  EA  L   M  + 
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              ++ TY+ ++DGFC     D+AF++F  L S      ++T+N++I    K G  + A 
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           DL   +   G+ PS VTY ++ ++ +    +E+   ++S+M+KSG +P+ +    LI  L
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKL 865

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             +G +  A    + + E          +M+I  + +E
Sbjct: 866 LDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 216/465 (46%), Gaps = 60/465 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMS-SHSHAAAQTLILKIIS--GRITSS-- 81
           +A SLF+   R+G++ +     I+L     K + S  H     ++   IS   RI ++  
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512

Query: 82  -SFTPRSLLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
            ++  R+++  +  +F        S N VT    Y ++IDA  K    D A+  F+QM++
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVT----YGTLIDALCKLGRVDDAVLQFNQMIN 568

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGW-------------------LFFSE---NRCK-- 170
            GV P +  FNSL   V   C+ DK W                   +FF+    N CK  
Sbjct: 569 EGVTPNNVVFNSL---VYGLCTVDK-WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624

Query: 171 ----------------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                           ++ DV S+  LI G C A  +++A ++L+ +   G  PN+V Y 
Sbjct: 625 RVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYN 684

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +L+ G CK G I+ A  LFR++   G+     TY  ++ GLF++G   +  E Y  M  +
Sbjct: 685 TLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKS 744

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
               S+ TY+ ++  +C      E FK+F  +   ++  +++T+N +I GL K  R ++A
Sbjct: 745 RKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDA 804

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             L   +   G+ P+V+TY  + +   + G  ++   LF+ ++ +G +P+    N LIR 
Sbjct: 805 MDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRK 864

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
               G    A   + +++E+  +    T ++LI  F R +  + A
Sbjct: 865 LLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHA 909



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 1/235 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y +++  + K+   D A   F +ML  GV P   T+N++L  + +S  F +   L+ +  
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +    + ++ I++ G C+    ++AF++   L  M    +++ +  +IDG  K G  E
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  I   GLV +  TY ++   L + G  ++    +  M+ +G +P+ +  N LI
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI 862

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
            +  + G++        ++  +  +    T + LI    +E   Q A+ L ++ +
Sbjct: 863 RKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 246/496 (49%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN----------------------- 145
           Y ++ID   K++L D+A   F QM+D+GV+P  +T+N                       
Sbjct: 241 YTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 146 ------------SLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
                       SLL ++ K+    +   FF     K ++  V ++GI++ G    G L+
Sbjct: 301 AGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALS 360

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +  ++LN +   G SPN  I+        K G I++A  +F K+ + GL     +Y  LI
Sbjct: 361 EMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALI 420

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P +  ++ L++  C   K  +  +LF EM +  + 
Sbjct: 421 DALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIH 480

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N+V +NT++C LCKE RV E +RL+D ++  G+ P+VI+YN LIDG C AG  D+A +L
Sbjct: 481 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 540

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              + S G  P   +YN L+  + KAG    A    R+M   GITP  VTY  ++    +
Sbjct: 541 LEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQ 600

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  SG   D+YTY ++++GLC    + EA K+F ++    L+ N + 
Sbjct: 601 TKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIIT 660

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI    K G    A+ L   +   GLV N+ +Y   +  L ++G   E + L + M 
Sbjct: 661 FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 721 KNGTAPNSQMLNALVR 736



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 205/396 (51%), Gaps = 3/396 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEE---MGFSPNVVIYTSLIDGCCKNGDIERAK 230
           D  S+ IL+KG C      +A E+L+ + +       PNVV Y+++I+G    G +++  
Sbjct: 164 DTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPY 223

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++ + G+     TYT +I GL K  L       +++M  NGV P++ TYNCLIH Y
Sbjct: 224 NLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGY 283

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
            + GK  E  ++ +EM       N  TY +L+  LCK  R +EA    D M   GI P+V
Sbjct: 284 LSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSV 343

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY  ++ G+   G   +   L N + +NG SP+   +N+   A++K G    A D+  +
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++G++P  V+Y  LID+  +   ++ A   ++ M   G +PD+  +  L++GLC    
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
            ++  +LF  M    + PN V +N ++   CKEG      RL+  +   G+ P++ SY++
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I   C  G   EA  LL  M+ +GLKP    YN L
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL 559



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 196/428 (45%), Gaps = 35/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V S+  +I G    G ++K + +  ++ + G  P+VV YT++IDG CK    +RA+ +F
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++ + G+     TY  LI G    G  K+     E+M   G  P+  TY  L++  C  
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  E    FD M  + +  +V TY  ++ G   +  + E   LL+ M   GISPN   +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N     +   G  DKA  +FN+++  G SP  V+Y  LI A  K G    A     +M  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKA----FEMYSL------------------------ 445
            G+TP  V ++ L+      D  EK     FEM ++                        
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 446 -------MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
                  ++  G  PDV +Y  LI G C+ G + EASKL   M    L+P+   YN ++ 
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK G    A     +M   G+ P + +Y++ +  L Q  ++ EA+ L   M+  G K 
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621

Query: 559 SVSLYNIL 566
            +  YNI+
Sbjct: 622 DIYTYNII 629



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 218/465 (46%), Gaps = 51/465 (10%)

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           S T  SL   +++ C     ++  + NRC       ++ ILI   C  G L   F     
Sbjct: 72  SETVVSLFNRMVRDC-----YIKVAPNRC-------TYSILIGCFCRMGHLEHGFAAFGL 119

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDI-ERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           + + G+  + ++   L++G C    + E   +L +++ ELG +    +Y +L+ GL    
Sbjct: 120 ILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEK 179

Query: 260 LQKDGFEFYEKM---QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
             ++  E    M   Q+    P++ +Y+ +I+ +  EG+V + + LF EM  R +  +VV
Sbjct: 180 RAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVV 239

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF---------------- 360
           TY T+I GLCK      AE +  QM   G+ PN+ TYN LI G+                
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 361 -------------------CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                              C  G   +A   F+ +   G  PSV TY +++  ++  G  
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
               DL+  M   GI+P+   + I   ++ +   ++KA ++++ M++ G SPD  +YG L
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  LC  G + +A   FN M    + P+ VV++ +++G C      +   L  EM   G+
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            PNI  +++ +  LC++G+  E + L++ +  +G++P V  YN L
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 216/464 (46%), Gaps = 5/464 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++I+        D+    F +M+D G+ P   T+ +++  + K+  FD+    F    
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +N  K  +D Y+   LI G    G   +   +L ++   G  PN   Y SL++  CKNG 
Sbjct: 266 DNGVKPNIDTYN--CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A+  F  +   G+  +  TY +++ G    G   +  +    M  NG+SP+ + +N 
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
               Y   G + +   +F++MR + ++ + V+Y  LI  LCK  RV +AE   +QM   G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P+++ ++ L+ G C   + +K   LF ++ + G  P++V +N ++    K G      
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            LV  +E  G+ P  ++Y  LID    +  +++A ++   M   G  PD ++Y  L+HG 
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G +  A   F  M    + P  V YN ++ G  +      A  L   M   G   +I
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDI 623

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+  +  LC+     EA  +   +   GL+ ++  +NI+  A
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 229/488 (46%), Gaps = 29/488 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++     A+ K  + D+A+  F++M   G+ P + ++ +L+  + K    D   + F++ 
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + V  D+  F  L+ G C      K  E+  ++  +G  PN+V + +++   CK G +
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
              + L   I  +G+     +Y  LI G    G   +  +  E M   G+ P  ++YN L
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL 559

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H YC  G++   +  F +M    +   VVTYNT++ GL +  R  EA+ L   M  +G 
Sbjct: 560 LHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 619

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             ++ TYN +++G C +   D+A ++F  L S G   +++T+N++I A  K G  + A D
Sbjct: 620 KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 679

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   +   G+  + VTY +++++ +    +E+   ++S M+K+G +P+      L+  L 
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMI------------------FGYCKEGNSYR 508
            +G++  A    + + E          +M+I                  +    E NS  
Sbjct: 740 HRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSA 799

Query: 509 ALR----------LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            ++          L  EM  KGL P++ +Y++ +  L Q G++ EA+ L   M+    + 
Sbjct: 800 LIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859

Query: 559 SVSLYNIL 566
           ++  YNI+
Sbjct: 860 NIYTYNII 867



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 217/494 (43%), Gaps = 37/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++IDA  K    D A   F+QM++ GV P    F+SL   V   C+ DK W     LF
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSL---VYGLCTVDK-WEKVEELF 471

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  ++  F  ++   C+ G + +   +++ +E MG  P+V+ Y +LIDG C  
Sbjct: 472 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 531

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A  L   +  +GL     +Y  L+ G  K G     +  + KM  NG++P + TY
Sbjct: 532 GTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTY 591

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++H      + SE  +L+  M +     ++ TYN ++ GLCK   V EA ++   +  
Sbjct: 592 NTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCS 651

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+  N+IT+N +I      G  + A  LF  + +NG   +VVTY +++    + G+ + 
Sbjct: 652 KGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEE 711

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
              L   ME+ G  P+      L+   +   D+ +A    S + +  FS +  T  +LI 
Sbjct: 712 FDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLIS 771

Query: 464 ---------------------------GLCMKGN-MKEASKLFNSMWETKLEPNDVVYNM 495
                                       L  K   + +A  LF  M    L P+ V YN 
Sbjct: 772 IFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNT 831

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G  + G    A  L   M       NI +Y+  +  LC+     EA  +   +   G
Sbjct: 832 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 891

Query: 556 LKPSVSLYNILYRA 569
           L+ ++  +NI+  A
Sbjct: 892 LQLNIITFNIMIGA 905



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 213/504 (42%), Gaps = 64/504 (12%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCE 187
           F +ML+ G+ P    FN++L  + K     +G        C  V  DV S+  LI G C 
Sbjct: 471 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL 530

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG +++A ++L  +  +G  P+   Y +L+ G CK G I+ A   FRK+   G+     T
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVT 590

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  ++ GLF+     +  E Y  M  +G    +YTYN +++  C    V E  K+F  + 
Sbjct: 591 YNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY-------------- 353
            + +  N++T+N +I  L K  R ++A  L   +   G+  NV+TY              
Sbjct: 651 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710

Query: 354 ---------------------NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
                                N L+      G+  +A    ++L     S    T ++LI
Sbjct: 711 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770

Query: 393 RAFS----------------------------KAGNSKMASDLVREMEERGITPSEVTYT 424
             FS                            KA     A  L REM  +G+TP  VTY 
Sbjct: 771 SIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYN 830

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            ++    ++    +A E+Y  M  S    ++YTY ++++GLC    + EA K+F S+   
Sbjct: 831 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+ N + +N+MI    K G    A+ L   +   GLVP++ +Y      L ++G   E 
Sbjct: 891 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950

Query: 545 EVLLNQMLKLGLKPSVSLYNILYR 568
           + L   M K G      L N L R
Sbjct: 951 DGLFLTMEKSGTPLDSRLLNALVR 974



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 220/478 (46%), Gaps = 37/478 (7%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
            Y +++  + K+   D A  +F +ML +G+ P   T+N++L  + ++  F +   L+ +  
Sbjct: 556  YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                + D+Y++ I++ G C++  +++A ++   L   G   N++ +  +I    K G  E
Sbjct: 616  NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A  LF  I   GLV    TY +++  L + G  ++    +  M+ NG +P+    N L+
Sbjct: 676  DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI------------------------- 322
                + G +S       ++  R  +    T + LI                         
Sbjct: 736  RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEA 795

Query: 323  ---CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
                 + K  R+ +A  L  +M M G++P+V+TYN ++ G    G   +A  L+  + ++
Sbjct: 796  NSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 855

Query: 380  GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
                ++ TYN+++    K+     A  + + +  +G+  + +T+ I+I + ++    E A
Sbjct: 856  RTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDA 915

Query: 440  FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             ++++ +  +G  PDV TY ++   L  +G+++E   LF +M ++    +  + N ++  
Sbjct: 916  MDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRR 975

Query: 500  YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW-------PEAEVLLNQ 550
              + G+  RA   L +++EK      ++ S  I +  + G++       PE   LLN+
Sbjct: 976  LLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSR-GEYQHHAKSLPEKYRLLNE 1032



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 192/440 (43%), Gaps = 42/440 (9%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQML 133
           +GRI S+    R +L          SN +T   + Y +I+    +++   +A   +  M+
Sbjct: 566 AGRIDSAYSHFRKML----------SNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCCEAGDL 191
           +SG +    T+N +L  + KS   D+    F +N C   ++L++ +F I+I    + G  
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSNCVDEAIKMF-QNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             A ++   +   G   NVV Y  +++   + G +E    LF  + + G          L
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI-----HEYCNEGK----------- 295
           +  L   G       +  K+     S    T + LI      EY +  K           
Sbjct: 735 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNE 794

Query: 296 ------------VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
                       + + + LF EM  + +  +VVTYNT++ GL +  R  EA+ L   M  
Sbjct: 795 ANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 854

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           +    N+ TYN +++G C +   D+AF++F  L S G   +++T+N++I A  K G  + 
Sbjct: 855 SRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKED 914

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL   +   G+ P  VTY ++ ++ +    +E+   ++  M+KSG   D      L+ 
Sbjct: 915 AMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVR 974

Query: 464 GLCMKGNMKEASKLFNSMWE 483
            L  +G++  A    + + E
Sbjct: 975 RLLQRGDISRAGAYLSKLDE 994



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 51/321 (15%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCK-----------EMRVQEAERLLDQMKMA 344
           + +  KLFDE+       +VV +N L+  + +           E  V    R++    + 
Sbjct: 30  LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLF---------------NQL-------KSNGQS 382
            ++PN  TY+ LI  FC  G  +  F  F               NQL       K  G++
Sbjct: 90  -VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA 148

Query: 383 --------------PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI---TPSEVTYTI 425
                         P  V+YN+L++       ++ A +L+  M +  +    P+ V+Y+ 
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I+ F     ++K + ++  M   G  PDV TY  +I GLC       A  +F  M +  
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++PN   YN +I GY   G     +R+L EM+  G  PN  +Y S +  LC++G+  EA 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
              + M+  G+KPSV+ Y I+
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIM 349



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 183/431 (42%), Gaps = 40/431 (9%)

Query: 72   KIISGRITSSSFTPRSLLCHLTQ---------LFPSSSNPVTKSRLY--ESIIDAHLKSR 120
            K++S  IT    T  ++L  L Q         L+ +  N  TK  +Y    I++   KS 
Sbjct: 578  KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSN 637

Query: 121  LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFG 179
              D+A+  F  +   G++    TFN ++  ++K    +    LF +     +  +V ++ 
Sbjct: 638  CVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYR 697

Query: 180  ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            ++++   E G L +   + + +E+ G +PN  +  +L+      GDI RA     K+ E 
Sbjct: 698  LVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 757

Query: 240  GLVATQHTYTVLIC---------------------------GLFKNGLQ-KDGFEFYEKM 271
                   T ++LI                             L K   +  D +  + +M
Sbjct: 758  NFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREM 817

Query: 272  QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             + G++P + TYN ++H     G+ SE  +L+  M +     N+ TYN ++ GLCK   V
Sbjct: 818  LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877

Query: 332  QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             EA ++   +   G+  N+IT+N +I      G  + A  LF  + +NG  P VVTY ++
Sbjct: 878  DEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLV 937

Query: 392  IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
                 + G+ +    L   ME+ G          L+   ++  D+ +A    S + +  F
Sbjct: 938  AENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNF 997

Query: 452  SPDVYTYGVLI 462
            S +  T   LI
Sbjct: 998  SLEASTTSELI 1008



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 72/203 (35%), Gaps = 63/203 (31%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A +LF++L  + +  SVV +N L+ A S++               R  T    T   L +
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSG------------RRSTTSESETVVSLFN 80

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             VR   ++ A             P+  TY +LI   C  G+++     F  + +T    
Sbjct: 81  RMVRDCYIKVA-------------PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRM 127

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK--WPEAEV 546
           + +V N ++ G C                                    DGK      +V
Sbjct: 128 DHIVINQLLNGLC------------------------------------DGKRVGEAMDV 151

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           LL +M +LG  P    YNIL + 
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKG 174


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 228/449 (50%), Gaps = 9/449 (2%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGC 185
           HQM   G+ P   T N   I +   C   +    FS     ++L    ++ +F  LI+G 
Sbjct: 83  HQMDSFGIPPNIYTLN---ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL 139

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G + +   + +++   GF PNVV Y +LI+G CK G    A  L R + +       
Sbjct: 140 CVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDV 199

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT +I  L K+      F  + +M   G+SPS++TYN LIH  CN  +      L +E
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 259

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M + ++  NVV ++T++  LCKE +V EA  ++D M   G+ PNV+TYN L+DG C   E
Sbjct: 260 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 319

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A ++F+ +   G +P VV+Y+ LI  + K    + A  L  EM  + + P+ VTY+ 
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        ++ A  ++  M   G  PD  +Y +L+  LC    + EA  L  ++  + 
Sbjct: 380 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 439

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+  +Y ++I G C+ G    A  L   ++ KGL PN+ +Y+  I  LCQ G   EA 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA--KNN 572
            L  +M + G  P+   YN++ R   +NN
Sbjct: 500 KLFGEMKRKGYSPNGCTYNLITRGFLRNN 528



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D    + +M      PS+  +  L+         S    L  +M    +  N+ T N LI
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C   R+  A  +L ++   G  PN+ T+N LI G C  G+  +   LF+++   G  
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  LI    K G++  A  L+R ME+    P  V YT +IDS  +   + +AF +
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 221

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +S M   G SP ++TY  LIH LC     K  + L N M  +K+ PN V+++ ++   CK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  ++  M ++G+ PN+ +Y++ +   C   +  EA  + + M+  G  P V  
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341

Query: 563 YNILYRAKNNIE 574
           Y+ L      I+
Sbjct: 342 YSTLINGYCKIQ 353



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 108/207 (52%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS+  +  L+ + +K  +      L  +M+  GI P+  T  IL
Sbjct: 41  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 100

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF     +  AF + + + K G  P++ T+  LI GLC++G + E   LF+ M     
Sbjct: 101 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 160

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK G++  A+RLL  M +    P++  Y+S I  LC+D +  +A  
Sbjct: 161 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 220

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ PS+  YN L  A  N+
Sbjct: 221 LFSEMIHQGISPSIFTYNSLIHALCNL 247



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 46/99 (46%)

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A   FN M      P+   +  ++    K  +    L L  +M+  G+ PNI + + 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I   C   +   A  +L ++LKLG +P+++ +N L R 
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 138


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 232/438 (52%), Gaps = 9/438 (2%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L C + Q     S P+     +  ++    KS+  D  +  FH M   G+     ++N 
Sbjct: 55  DLFCKMIQ-----SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 147 LLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           ++  + +   F        +  +   E DV +   LI G C+   +  A ++++++EEMG
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           F P+VVIY ++IDG CK G +  A  LF ++   G+ A   TY  L+ GL  +G   D  
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
                M +  + P++ T+  +I  +  EGK SE  KL++EM  R V  +V TYN+LI GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C   RV EA+++LD M   G  P+V+TYN LI+GFC +   D+  +LF ++   G     
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           +TYN +I+ + +AG    A ++   M+ R   P+  TY+IL+     +  +EKA  ++  
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           MQKS    D+ TY ++IHG+C  GN+++A  LF S+    L+P+ V Y  MI G+C++  
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 506 SYRALRLLGEMNEKGLVP 523
             ++  L  +M E GL+P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 242/462 (52%), Gaps = 7/462 (1%)

Query: 101 NPVTK---SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           NPV     SR +         S   ++ +  F +M+ S   P    F+ +L  + KS ++
Sbjct: 26  NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85

Query: 158 DKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D    LF     C +  D+YS+ I+I   C       A  V+ ++ + G+ P+VV  +SL
Sbjct: 86  DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I+G C+   +  A  L  K+ E+G       Y  +I G  K GL  D  E +++M+ +GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                TYN L+   C  G+ S+  +L  +M  R++  NV+T+  +I    KE +  EA +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L ++M    + P+V TYN LI+G C  G  D+A ++ + + + G  P VVTYN LI  F 
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K+      + L REM +RG+    +TY  +I  + ++   + A E++S M      P++ 
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIR 382

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +L++GLCM   +++A  LF +M ++++E +   YN++I G CK GN   A  L   +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           + KGL P++ SY++ I   C+  +W ++++L  +M + GL P
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 3/300 (1%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            +  M++ G+   LY+YN +I+  C   +      +  +M       +VVT ++LI G C
Sbjct: 91  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  RV +A  L+ +M+  G  P+V+ YN +IDG C  G  + A  LF++++ +G     V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L+     +G    A+ L+R+M  R I P+ +T+T +ID FV+     +A ++Y  M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    PDV+TY  LI+GLCM G + EA ++ + M      P+ V YN +I G+CK    
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +L  EM ++GLV +  +Y++ I    Q G+   A+ + ++M     +P++  Y+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 129/271 (47%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E   LF +M       ++V ++ ++  + K         L   M++ GI  ++ +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I+  C       A  +  ++   G  P VVT + LI  F +      A DLV +MEE G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  V Y  +ID   +   +  A E++  M++ G   D  TY  L+ GLC  G   +A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +L   M    + PN + +  +I  + KEG    A++L  EM  + + P++ +Y+S I  L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C  G+  EA+ +L+ M+  G  P V  YN L
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 123/238 (51%)

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           M ++E   L  +M  +   P+++ ++K++     +   D    LF+ ++  G    + +Y
Sbjct: 48  MNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N++I    +     +A  +V +M + G  P  VT + LI+ F + + +  A ++ S M++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GF PDV  Y  +I G C  G + +A +LF+ M    +  + V YN ++ G C  G    
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A RL+ +M  + +VPN+ ++++ I V  ++GK+ EA  L  +M +  + P V  YN L
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 228/449 (50%), Gaps = 9/449 (2%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGC 185
           HQM   G+ P   T N   I +   C   +    FS     ++L    ++ +F  LI+G 
Sbjct: 92  HQMDSFGIPPNIYTLN---ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGL 148

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G + +   + +++   GF PNVV Y +LI+G CK G    A  L R + +       
Sbjct: 149 CVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDV 208

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT +I  L K+      F  + +M   G+SPS++TYN LIH  CN  +      L +E
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 268

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M + ++  NVV ++T++  LCKE +V EA  ++D M   G+ PNV+TYN L+DG C   E
Sbjct: 269 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 328

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A ++F+ +   G +P VV+Y+ LI  + K    + A  L  EM  + + P+ VTY+ 
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        ++ A  ++  M   G  PD  +Y +L+  LC    + EA  L  ++  + 
Sbjct: 389 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 448

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+  +Y ++I G C+ G    A  L   ++ KGL PN+ +Y+  I  LCQ G   EA 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA--KNN 572
            L  +M + G  P+   YN++ R   +NN
Sbjct: 509 KLFGEMKRKGYSPNGCTYNLITRGFLRNN 537



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D    + +M      PS+  +  L+         S    L  +M    +  N+ T N LI
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C   R+  A  +L ++   G  PN+ T+N LI G C  G+  +   LF+++   G  
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  LI    K G++  A  L+R ME+    P  V YT +IDS  +   + +AF +
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 230

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +S M   G SP ++TY  LIH LC     K  + L N M  +K+ PN V+++ ++   CK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  ++  M ++G+ PN+ +Y++ +   C   +  EA  + + M+  G  P V  
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350

Query: 563 YNILYRAKNNIE 574
           Y+ L      I+
Sbjct: 351 YSTLINGYCKIQ 362



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 108/207 (52%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS+  +  L+ + +K  +      L  +M+  GI P+  T  IL
Sbjct: 50  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 109

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF     +  AF + + + K G  P++ T+  LI GLC++G + E   LF+ M     
Sbjct: 110 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 169

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK G++  A+RLL  M +    P++  Y+S I  LC+D +  +A  
Sbjct: 170 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 229

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ PS+  YN L  A  N+
Sbjct: 230 LFSEMIHQGISPSIFTYNSLIHALCNL 256



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 46/99 (46%)

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A   FN M      P+   +  ++    K  +    L L  +M+  G+ PNI + + 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I   C   +   A  +L ++LKLG +P+++ +N L R 
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 147


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/576 (28%), Positives = 283/576 (49%), Gaps = 55/576 (9%)

Query: 19  RMAKLPPLK---AFSLFNWASRQG---LQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           ++A L P+    A    NW  +Q    L+H    +SI   +L+    +  +  A++ ILK
Sbjct: 16  KLASLRPVHGRLALKFLNWVIQQPGLELRHLTHMLSITTHILVR---ARLYENAKS-ILK 71

Query: 73  IISGRITSSSFTPRSLLCHLTQLFP-SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
            +S     S    +S+   L   +P   SNP     +++ +I  +L+  +   AL  F  
Sbjct: 72  HLSQMGVGS----KSVFGALMNTYPLCKSNP----SVFDLLIRVYLREGMVGDALETFRL 123

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M   G  P   T N LL  ++K       WLFF E   + V  DV +F ILI   C  G 
Sbjct: 124 MGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGK 183

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L KA  +L ++EE G+ P+VV Y ++++  CK G  + A  L  ++G  G+ A   TY +
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+  L KN     G+   +KM+   +SP+  TYN +I+ +  EGK+    ++F EM    
Sbjct: 244 LVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLN 303

Query: 311 VACNVVTYNTLI---C--------------------------------GLCKEMRVQEAE 335
           +  N VTYN LI   C                                GLC+  + + ++
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSK 363

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            +L++M+M G+    I Y  +IDG C  G  +++ +L +++  +G  P VVT++VLI  F
Sbjct: 364 SILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGF 423

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  K   +++ +M + G+ P+ + YT LI ++ ++ D+ +AF++Y  M + G+  + 
Sbjct: 424 CRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANC 483

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +   VL+  LC  G +  A   F+ M +    PN + ++ +I GY   GN  +A  +  E
Sbjct: 484 FICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDE 543

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           M + G  P+  +Y   +  LC+ GK+ EA+ LL+++
Sbjct: 544 MIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 225/467 (48%), Gaps = 6/467 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++ + K      AL    QM   G+   + T+N L+  + K+    KG+L   + R
Sbjct: 206 YNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR 265

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  +I G  + G +  A  +  ++  +   PN V Y +LIDG C +G+ E
Sbjct: 266 KRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFE 325

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +   +   G    + +Y+ L+ GL ++   +      E+M++NG+      Y  +I
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G ++E  KL D+M    V  +VVT++ LI G C+  +++  + ++ +M  AG++
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN I Y  LI  +C  G+  +AF+++  +   G   +    NVL+ +  K G   +A   
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M + G  P+ +T+  +I+ +  S +  KAF M+  M K+G  P  +TYG L+  LC 
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G  KEA +L + +       + V YN ++    K G    A+ L  EM ++ ++P+  +
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNI----LYRA 569
           Y+     L + GK   A      +L  G + P   +Y      L+RA
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 198/430 (46%), Gaps = 3/430 (0%)

Query: 143  TFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVL-NQ 200
            T+N++L+   KS         F E  +  V  D Y++ I+  G    G +  A     N 
Sbjct: 590  TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649

Query: 201  LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG- 259
            L +   SP  V+YT+ +DG  + G  + A      + + GL A      V++ G  + G 
Sbjct: 650  LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709

Query: 260  LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
            + K G  F        +SPSL TYN L+H Y  +  +S+   L++ M    +  + +T +
Sbjct: 710  MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769

Query: 320  TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +LI G CK   +    +LL +M + G++ +  T+N LI  +C+  E  KAF L N +   
Sbjct: 770  SLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829

Query: 380  GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
               P + T++ +I   S+    + +  L+ EM ERG  P    Y  L++   R   +  A
Sbjct: 830  DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889

Query: 440  FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            F++   M+  G S        L+ GL   G ++EA  + + M    L P    +  ++  
Sbjct: 890  FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHM 949

Query: 500  YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            +C+  +   AL+L   M+   +  ++ +Y+  I  LC DG    A  L  ++ + GL P+
Sbjct: 950  FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009

Query: 560  VSLYNILYRA 569
            ++ Y IL  A
Sbjct: 1010 MTTYCILIDA 1019



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 237/513 (46%), Gaps = 20/513 (3%)

Query: 26   LKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI--ISGRITSSSF 83
            LKAFS+F+   + G  H P   +    LL +   +     A+ L+ K+  I   + + ++
Sbjct: 535  LKAFSMFDEMIKAG--HHPSHFTY-GGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTY 591

Query: 84   TP-------RSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
                       +L     LF      N +  S  Y  I    ++      AL ++  +L 
Sbjct: 592  NTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG 651

Query: 135  SG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDL 191
             G V P    + + +  + ++    K  L+F E+  K  L  D+ +  +++ G    G +
Sbjct: 652  KGAVSPEKVMYTTFVDGLFRAGQ-SKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKM 710

Query: 192  NKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
             KA ++   +   +  SP++  Y  L+ G  K  ++ +   L+  +   G+   + T   
Sbjct: 711  AKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHS 770

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            LI G  K+ +   G +  +KM L+GV+    T+N LI +YC   +V + F L + M   +
Sbjct: 771  LILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFD 830

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
            +  ++ T++++I  L +   VQE+  LL +M   G  P+   Y  L++  C  G    AF
Sbjct: 831  IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +L +++++ G S   V  + L+R  +K G  + A  ++  M  + + P+  T+T L+  F
Sbjct: 891  KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             R++ + +A ++   M       DV  Y VLI GLC  G++  A KL+  + +  L PN 
Sbjct: 951  CRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNM 1010

Query: 491  VVYNMMIFG-YCKEGNSYRALRLLGEMNEKGLV 522
              Y ++I   +  + +  +   LL ++ E+G++
Sbjct: 1011 TTYCILIDAIFTNDISLAKGEVLLKDLQERGVI 1043


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 250/479 (52%), Gaps = 7/479 (1%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           L  L ++  S   P   +  Y  +I    +S     AL  F +M+D GV P   T+N+++
Sbjct: 178 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 149 IFVIKSCSFDKGWLF----FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
              +K    + G+        + R   + +V ++ +L+ G C AG +++   +++++   
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGR---KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
              P+   Y+ L DG  + GD      LF +  + G++   +T ++L+ GL K+G     
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            +  E +   G+ P+   YN LI+ YC    +   F +F++M+ R +  + +TYN LI G
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK   + EAE L+ +M+ +G+ P+V T+N LID +  AG+ +K F + + ++  G   +
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V+++  +++AF K G    A  ++ +M  + + P+   Y  +ID+++ S   E+AF +  
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVE 534

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M+ SG S  ++TY +L+ GLC    + EA +L  ++    L P+ V YN +I   C +G
Sbjct: 535 KMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           ++ RAL LL EM++  + P + +Y   +  L   G+  + E L   M+   ++PS S+Y
Sbjct: 595 DTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 219/444 (49%), Gaps = 3/444 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGC 185
           F  ++ +G RP +  +N  +   + +   D+          +      D +S+ ++I G 
Sbjct: 146 FGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGL 205

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
             +G  + A +V +++ + G +PN + Y ++IDG  K GD+E    L  ++ + G     
Sbjct: 206 WRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNV 265

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY VL+ GL + G   +     ++M    + P  +TY+ L       G       LF E
Sbjct: 266 VTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGE 325

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
              + V     T + L+ GLCK+ +V +AE++L+ +   G+ P    YN LI+G+C   +
Sbjct: 326 SLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRD 385

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              AF +F Q+KS    P  +TYN LI    K      A DLV EME+ G+ PS  T+  
Sbjct: 386 LQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNT 445

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID++ R+  +EK F + S MQ  G   +V ++G ++   C  G + EA  + + M    
Sbjct: 446 LIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD 505

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + PN  VYN +I  Y + G + +A  L+ +M   G+  +I +Y+  +  LC++ +  EAE
Sbjct: 506 VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAE 565

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            L+  +   GL+P V  YN +  A
Sbjct: 566 ELIYNLTNQGLRPDVVSYNTIISA 589



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 204/450 (45%), Gaps = 42/450 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID H+K    +       QML  G +P   T+N LL  + ++   D+      E  
Sbjct: 233 YNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT 292

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               L D +++ IL  G    GD      +  +  + G        + L++G CK+G + 
Sbjct: 293 SYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVA 352

Query: 228 RAKMLFRKIGELGLVAT-----------------------------QH------TYTVLI 252
           +A+ +   +   GLV T                             +H      TY  LI
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K  +  +  +   +M+ +GV PS+ T+N LI  Y   G++ + F +  +M+ + + 
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV+++ +++   CK  ++ EA  +LD M    + PN   YN +ID + ++G T++AF L
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KS+G S S+ TYN+L++   K      A +L+  +  +G+ P  V+Y  +I +   
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D ++A E+   M K    P + TY  L+  L   G + +   L+  M    +EP+  +
Sbjct: 593 KGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSI 652

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           Y       C+  N  +   L  EM+EKG+ 
Sbjct: 653 YGT----RCE--NESKVASLKKEMSEKGIA 676



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           +CN++  + L  G   ++R          +  AG  P+   +NK +     AG+ D+A  
Sbjct: 125 SCNLLLESLLSVGRHADVRAA-----FGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 372 LFNQL-KSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           +  ++ +S G   P   +YNV+I    ++G    A  +  EM +RG+ P+++TY  +ID 
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            V+  D+E  F +   M + G  P+V TY VL+ GLC  G M E   L + M    + P+
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y+++  G  + G+S   L L GE  +KG++    + S  +  LC+DGK  +AE +L 
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 550 QMLKLGLKPSVSLYNIL 566
            ++  GL P+ ++YN L
Sbjct: 360 MLVHTGLVPTTAIYNTL 376



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 8/333 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
           V  + +Y ++I+ + + R    A   F QM    +RP   T+N+L+  + K     +   
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAED 426

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L     +  V+  V +F  LI     AG L K F VL+ +++ G   NV+ + S++   C
Sbjct: 427 LVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFC 486

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           KNG I  A  +   +    +V     Y  +I    ++G  +  F   EKM+ +GVS S++
Sbjct: 487 KNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIF 546

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN L+   C   ++ E  +L   + ++ +  +VV+YNT+I   C +     A  LL +M
Sbjct: 547 TYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               I P + TY+ L+     AG       L+  +      PS   Y       ++  N 
Sbjct: 607 HKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG------TRCENE 660

Query: 402 KMASDLVREMEERGITPSEVTYTIL-IDSFVRS 433
              + L +EM E+GI   +   T L +D  + S
Sbjct: 661 SKVASLKKEMSEKGIAFDDTERTNLELDRIIAS 693


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 245/494 (49%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   ++A  +  +M+D G+ P + T+ +L+  + K     +      E  
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C  ++ ++  +G L+ G  + G   +AF++L ++   G  PN ++Y +LI G CK G + 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L +++ ++GL     TY  L+ G F+   +   FE   +M+ +G+ P++Y+Y  +I
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G+  E   L +EM    +  N   Y  LI G  KE  +  A   L++M  A + 
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  YN LI G    G  ++A   + Q++  G  P   TY+ LI  + K GN + A  L
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK----------------------------- 438
           +R+M   G+ P+  TYT L++ + +S+D EK                             
Sbjct: 581 LRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 640

Query: 439 ------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                 AF + + ++K+G  PD++ Y  LI GLC   +M++A  L + M +  LEP  V 
Sbjct: 641 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVC 700

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G+C+ G+  RA  +   +  KGLVPN  +Y++ I   C++G   +A  L  +ML
Sbjct: 701 YNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML 760

Query: 553 KLGLKPSVSLYNIL 566
             G+ P   +YN+L
Sbjct: 761 DRGIAPDAFVYNVL 774



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 253/527 (48%), Gaps = 24/527 (4%)

Query: 44  PQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPV 103
           PQ+  ++ +++L+    H H     L+L  I   I  +    RS         PS S  V
Sbjct: 132 PQANGLLHQMILA----HPHP---PLVLASIQRAIQDTDHRSRS---------PSPSTAV 175

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
                 + ++D + K+     A      M D G+ P     N LL  ++++ + +  W  
Sbjct: 176 -----LDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 164 --FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             F E    +  DVY++   I+  C+A D + A +V  ++     + N V Y  +I G C
Sbjct: 231 KGFMEG-AGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           ++G +E A     ++ + GL     TY  L+ GL K    K+     ++M  +G+ P++ 
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+  +  EGK +E F +  EM    V  N + Y+ LI GLCK  ++  A +LL +M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ P+  TYN L+ G     + D AF L N+++++G  P+V +Y ++I    + G S
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           K A +L+ EM   G+ P+   Y  LI    +  ++  A E    M K+   PD++ Y  L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I GL   G M+EA + +  + +  L P++  Y+ +I GYCK GN  +A +LL +M   GL
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            PN  +Y+  +    +   + +   +L  ML  G KP   +Y I+ R
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIR 636



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 220/454 (48%), Gaps = 2/454 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y+++I    K     +A     +M+  G+RP + T+N L+    +    D  +   +E 
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   +  +VYS+GI+I G C+ G+  +A  +L ++   G  PN  +Y  LI G  K G+I
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A     K+ +  +      Y  LI GL   G  ++  E+Y ++Q  G+ P  +TY+ L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH YC  G + +  +L  +M +  +  N  TY  L+ G  K    ++   +L  M  +G 
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  +I     +   + AF +  +++ NG  P +  Y+ LI    K  + + A  
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM + G+ P  V Y  LID F RS D+ +A  ++  +   G  P+  TY  LI G C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++ +A  L+  M +  + P+  VYN++  G     +  +AL L  EM  +G   N++
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVS 803

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            +++ +   C+ GK  E E LL+ M+   + P+ 
Sbjct: 804 LFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNA 837



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 203/412 (49%), Gaps = 2/412 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I+   ++  S +A     +M+  G++P +  +  L+I   K  +         +  
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  D++ +  LIKG    G + +A E   Q+++ G  P+   Y+ LI G CK G++E
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L R++   GL     TYT L+ G FK+   +      + M  +G  P  + Y  +I
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                   +   F +  E+    +  ++  Y++LI GLCK   +++A  LLD+M   G+ 
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLE 695

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P ++ YN LIDGFC +G+  +A  +F+ + + G  P+ VTY  LI    K G+   A DL
Sbjct: 696 PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDL 755

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM +RGI P    Y +L      + D+E+A  +   M   G++ +V  +  L+HG C 
Sbjct: 756 YKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCK 814

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +G ++E  KL + M + ++ PN      ++  + K G    A R+  E+ +K
Sbjct: 815 RGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 155/296 (52%), Gaps = 4/296 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+  S   P   +  Y  +++ + KS   ++       ML SG +P ++ +  ++  +
Sbjct: 581 LRQMLNSGLKP--NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +S + +  ++  +E  +  +  D++ +  LI G C+  D+ KA  +L+++ + G  P +
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y +LIDG C++GDI RA+ +F  I   GLV    TYT LI G  KNG   D F+ Y++
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G++P  + YN L     +   + +   L +EM +R  A NV  +NTL+ G CK  +
Sbjct: 759 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGK 817

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +QE E+LL  M    I PN  T  K++  F  AG+  +A R+F +L+    S S  
Sbjct: 818 LQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSAT 873



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSEN 167
           Y  +I  + K+   ++A     QML+SG++P ++T+  LL    KS  ++K   +  S  
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML 620

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + D + +GI+I+    + ++  AF VL ++E+ G  P++ IY+SLI G CK  D+E
Sbjct: 621 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADME 680

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  ++ + GL      Y  LI G  ++G        ++ +   G+ P+  TY  LI
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G +++ F L+ EM  R +A +   YN L  G      +++A  L ++M   G +
Sbjct: 741 DGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA 800

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            NV  +N L+ GFC  G+  +  +L + +      P+  T   ++  F KAG    A  +
Sbjct: 801 -NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859

Query: 408 VREMEERGITPS 419
             E++++  + S
Sbjct: 860 FAELQQKKASQS 871


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 248/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   ++A  +   M D G+ P   T+ +L+  + KS   ++      E  
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C +++ +V  +  LI G    G+ ++AF+++ ++   G  PN + Y +L+ G CK G ++
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA +L +++          TY ++I G F++  +KD F    +M+  G+SP++YTY+ +I
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G+  +   L +EM  + +  N   Y  LI G C+E  V  A  + D+M    + 
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 521

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  YN LI G    G  +++ + F Q++  G  P+  TY+ LI  + K G+ + A  L
Sbjct: 522 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 581

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK----------------------------- 438
           V+ M + G+ P++V Y  L++S+ +SDD+EK                             
Sbjct: 582 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 641

Query: 439 ------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                 AF + S ++K+G  PDV+ Y  LI GLC   + ++A  + + M +  ++PN V 
Sbjct: 642 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 701

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK G+   A  +   +  KGLVPN  +Y+S I   C+ G    A  L N+ML
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761

Query: 553 KLGLKPSVSLYNIL 566
             G+ P   +Y++L
Sbjct: 762 ATGITPDAFVYSVL 775



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 247/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+A+ K R  D A     +M + G    + T+N L+  + +S + ++ + F  +  
Sbjct: 247 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 306

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------- 218
              +  D +++G LI G C++   N+A  +L+++      PNVV+Y +LID         
Sbjct: 307 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 366

Query: 219 --------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                                     G CK G ++RA +L +++          TY ++I
Sbjct: 367 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 426

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G F++  +KD F    +M+  G+SP++YTY+ +IH  C  G+  +   L +EM  + + 
Sbjct: 427 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 486

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N   Y  LI G C+E  V  A  + D+M    + P++  YN LI G    G  +++ + 
Sbjct: 487 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 546

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F Q++  G  P+  TY+ LI  + K G+ + A  LV+ M + G+ P++V Y  L++S+ +
Sbjct: 547 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 606

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           SDD+EK    +  M   G   D   YG+LIH L   GNM+ A ++ + + +    P+  V
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y+ +I G CK  +  +A  +L EM++KG+ PNI  Y++ I  LC+ G    A  + N +L
Sbjct: 667 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 726

Query: 553 KLGLKPSVSLYNIL 566
             GL P+   Y  L
Sbjct: 727 AKGLVPNCVTYTSL 740



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 196/359 (54%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G SP+V  Y++LI+  CK  + + AK +  ++ E G      TY VLI GL ++G  ++ 
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           F F + M+  G+ P  +TY  LI+  C   + +E   L DEM   E+  NVV Y  LI G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             +E    EA +++ +M  AG+ PN ITY+ L+ G C  G+ D+A  L  Q+  +   P 
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +TYN++I    +  + K A  L+ EME  GI+P+  TY+I+I    +S + EKA ++  
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G  P+ + Y  LI G C +GN+  A ++F+ M +  + P+   YN +IFG  K G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               + +   +M E+GL+PN  +YS  I    ++G    AE L+ +ML  GLKP+  +Y
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 256/546 (46%), Gaps = 11/546 (2%)

Query: 23  LPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           L P      F W+S Q L  +  +      L +S  +      A  L++K+I    +   
Sbjct: 99  LHPKLLLDFFYWSSPQ-LAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPS--- 154

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRS 141
             P  +L  + +    S +      + + ++D + KS R+ D A      M D G+ P  
Sbjct: 155 --PPVVLASIHRALSDSGH--RSPAVLDVLVDTYKKSGRVQDAAEVVL-MMRDRGMAPSI 209

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
              N+LL  ++++ +    W          +  DVY++  LI+  C+  + + A +VL +
Sbjct: 210 RCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVE 269

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + E G   N V Y  LI G C++G +E A    + + + GLV    TY  LI GL K+  
Sbjct: 270 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 329

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             +     ++M    + P++  Y  LI  +  EG   E FK+  EM    V  N +TY+ 
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 389

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L+ GLCK  ++  A  LL QM      P+ ITYN +I+G         AFRL +++++ G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            SP+V TY+++I    ++G  + ASDL+ EM  +G+ P+   Y  LI  + R  ++  A 
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E++  M K    PD+Y Y  LI GL   G ++E++K F  M E  L PN+  Y+ +I GY
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            K G+   A +L+  M + GL PN   Y   +    +     +       ML  G+    
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 561 SLYNIL 566
            +Y IL
Sbjct: 630 RIYGIL 635



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 222/460 (48%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID  ++   +D+A     +M+ +GV+P   T+++L+  + K    D+  L   + 
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     D  ++ ++I+G         AF +L+++E  G SPNV  Y+ +I G C++G+ 
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 470

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L  ++   GL      Y  LI G  + G      E ++KM    V P LY YN L
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G+V E  K F +M+ R +  N  TY+ LI G  K   ++ AE+L+ +M   G+
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + Y  L++ +  + + +K    F  +   G       Y +LI   S +GN + A  
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++  +E+ G  P    Y+ LI    ++ D EKAF +   M K G  P++  Y  LI GLC
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++  A  +FNS+    L PN V Y  +I G CK G+   A  L  EM   G+ P+  
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS         G   +A  L+ +M   G   S+S +N L
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNL 809



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 225/472 (47%), Gaps = 22/472 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  + +      A   F +M    V P    +NSL+  + K    ++   +F++ 
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + +  L + +++  LI G  + GDL  A +++ ++ + G  PN VIY  L++   K+ DI
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+    F+ + + G++     Y +LI  L  +G  +  F     ++ NG  P ++ Y+ L
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C      + F + DEM  + V  N+V YN LI GLCK   +  A  + + +   G+
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY  LIDG C  G+   AF L+N++ + G +P    Y+VL    S AG+ + A  
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM  RG   S  ++  L+D F +   M++  ++  ++   G  P+  T   +I GL 
Sbjct: 791 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 849

Query: 467 MKGNMKEASKLFNSMWETKLE-------------------PNDVVYNMMIFGYCKEGNSY 507
             G + E   +F  + +   E                   P DVV +M I  +CKEGN  
Sbjct: 850 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM-IRDHCKEGNLD 908

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +AL L   +  K      +SY + +  LC+ GK  EA  LL +M K G+ PS
Sbjct: 909 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 26/406 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y  +++++ KS   ++    F  MLD GV   +  +  L+  +  S + +  +   S  
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E    V  DV+ +  LI G C+  D  KAF +L+++ + G  PN+V Y +LIDG CK+GD
Sbjct: 656 EKNGSVP-DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I  A+ +F  I   GLV    TYT LI G  K G   + F  Y +M   G++P  + Y+ 
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L     + G + +   L +EM  R  A ++ ++N L+ G CK  ++QE  +LL  +   G
Sbjct: 775 LTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN +T   +I G  +AG+  +   +F +L+         T     R FS         
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQK-------TSESAARHFSS-------- 878

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  +M  +G  P +V   ++ D   +  +++KA  +  ++          +Y  ++  L
Sbjct: 879 -LFMDMINQGKIPLDVVDDMIRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 936

Query: 466 CMKGNMKEASKLFNSMWETKLEPND-----VVYNMMIFGYCKEGNS 506
           C KG + EA  L   M +  + P++     ++ N+   GY +E N+
Sbjct: 937 CRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNT 982


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 250/469 (53%), Gaps = 9/469 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           +S+ V+   L E +    L+      A+  F +M+ +   P    FN LL  ++K   +D
Sbjct: 43  ASSSVSGGDLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYD 102

Query: 159 KGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              +  S  + K+E+     D+Y+F I+I   C    ++ A  VL ++ ++G+ P+ V  
Sbjct: 103 ---VVISLGK-KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTI 158

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            SL++G C+   +  A  L  K+ E+G       Y  +I  L K     D  +F++++  
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR 218

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P++ TY  L++  CN G+ ++  +L  +M  R++  NV+TY+ L+    K  +V E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A+ + ++M    I P+++TY+ LI+G C     D+A ++F+ + S G  P VV+YN LI 
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F KA   +    L R+M +RG+  + VTY  LI  F +  D++KA E +S M   G SP
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D++TY +L+ GLC  G +++A  +F  M +++++ + V Y  +I G CK G    A  L 
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
             ++ KGL P+I +Y++ +  LC  G   E E L  +M + GL  + S+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSM 507



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 166/298 (55%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +KM++ G+   LYT+N +I+ +C   +VS    +  +M       + VT  +L+ G C+ 
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRR 168

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            RV +A  L+D+M   G  P+++ YN +ID  C     + A   F ++   G  P+VVTY
Sbjct: 169 NRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY 228

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             L+     +G    A+ L+R+M +R ITP+ +TY+ L+D+FV++  + +A E++  M +
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR 288

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
               PD+ TY  LI+GLC+   + EA+++F+ M      P+ V YN +I G+CK      
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++L  +M+++GLV N  +Y++ I    Q G   +A+   +QM   G+ P +  YNIL
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 187/382 (48%), Gaps = 6/382 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A  +  ++ +    P++V +  L+    K    +    L +K+  LG+    +T+ +
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +I   C  F+  L         KM   G  P   T   L++ +C   +VS+   L D+M 
Sbjct: 126 VINCFCCCFQVSL---ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 ++V YN +I  LCK  RV +A     ++   GI PNV+TY  L++G C++G  +
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RL   +     +P+V+TY+ L+ AF K G    A ++  EM    I P  VTY+ LI
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +     D +++A +M+ LM   G  PDV +Y  LI+G C    +++  KLF  M +  L 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN +I G+ + G+  +A     +M+  G+ P+I +Y+  +G LC +G   +A V+
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
              M K  +   +  Y  + + 
Sbjct: 423 FEDMQKSEMDLDIVTYTTVIQG 444



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF EM       ++V +N L+  + K  +      L  +M++ GI  ++ T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I+ FC   +   A  +  ++   G  P  VT   L+  F +      A  LV +M E 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  V Y  +IDS  ++  +  A + +  + + G  P+V TY  L++GLC  G   +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L   M + K+ PN + Y+ ++  + K G    A  +  EM    + P+I +YSS I  
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC   +  EA  + + M+  G  P V  YN L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTL 336



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 117/240 (48%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +++++ +A  L  +M      P+++ +N+L+       + D    L  +++  G    + 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N++I  F       +A  ++ +M + G  P  VT   L++ F R + +  A  +   M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G+ PD+  Y  +I  LC    + +A   F  +    + PN V Y  ++ G C  G  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A RLL +M ++ + PN+ +YS+ +    ++GK  EA+ +  +M+++ + P +  Y+ L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 235/449 (52%), Gaps = 2/449 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
           +R+S +A+    QM++ G +P + TF +L+  + +     +          K  + D+ +
Sbjct: 149 NRIS-EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G +I G C+ G+ + A  +LN++E+     +VVIY+++ID  CK   ++ A  LF ++ 
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     TY+ LI  L   G   D       M    ++P++ T+N LI  +  EGK+ 
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KLFDEM  R +  N+VTYN+LI G C   R+ EA+++   M      P+V+TYN LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           +GFC A +      LF  +   G   + VTY  LI  F +A +   A  + ++M   G+ 
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ +TY  L+D   ++  +EKA  ++  +QKS   PD+YTY ++  G+C  G +++   L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F S+    ++P+ + YN MI G+CK+G    A  L  +M E G +P+  +Y++ I    +
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           DG    +  L+ +M         S Y ++
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLV 596



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 229/449 (51%), Gaps = 7/449 (1%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGI 180
           AL    +M+  G  P   T NSLL          +      +    VE+    D  +F  
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ---MVEMGYQPDTVTFTT 175

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  +    ++A  ++ ++   G  P++V Y ++I+G CK G+ + A  L  K+ +  
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           + A    Y+ +I  L K     D    + +M   G+ P ++TY+ LI   CN G+ S+  
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L  +M  R++  NVVT+N+LI    KE ++ EAE+L D+M    I PN++TYN LI+GF
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C     D+A ++F  + S    P VVTYN LI  F KA       +L R+M  RG+  + 
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYT LI  F ++ D + A  ++  M   G  P++ TY  L+ GLC  G +++A  +F  
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + ++K+EP+   YN+M  G CK G       L   ++ KG+ P++ +Y++ I   C+ G 
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  L  +M + G  P    YN L RA
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 231/452 (51%), Gaps = 4/452 (0%)

Query: 116 HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELD 174
           HLK    D+A+  F +M+ S   P    F+ LL  + K   FD    F  +     V  +
Sbjct: 43  HLKL---DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN 99

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +Y++ I+I   C    L+ A  +L ++ ++G+ P++V   SL++G C    I  A  L  
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E+G      T+T L+ GLF++    +     E+M + G  P L TY  +I+  C  G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +      L ++M   ++  +VV Y+T+I  LCK   V +A  L  +M   GI P+V TY+
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI   C+ G    A RL + +     +P+VVT+N LI AF+K G    A  L  EM +R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I P+ VTY  LI+ F   D +++A ++++LM      PDV TY  LI+G C    + + 
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  M    L  N V Y  +I G+ +  +   A  +  +M   G+ PNI +Y++ +  
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC++GK  +A V+   + K  ++P +  YNI+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 34/389 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID+  K R  D AL  F +M + G+RP                            
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP---------------------------- 273

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV+++  LI   C  G  + A  +L+ + E   +PNVV + SLID   K G + 
Sbjct: 274 ------DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF ++ +  +     TY  LI G   +    +  + +  M      P + TYN LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C   KV +G +LF +M  R +  N VTY TLI G  +      A+ +  QM   G+ 
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN++TYN L+DG C  G+ +KA  +F  L+ +   P + TYN++     KAG  +   DL
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              +  +G+ P  + Y  +I  F +    E+A+ ++  M++ G  PD  TY  LI     
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            G+   +++L   M   +   +   Y ++
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLV 596



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 17/316 (5%)

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G++ +GL  DG+   EK+          + N L+H      K+ E   LF EM       
Sbjct: 21  GIYFSGLSYDGYR--EKL----------SRNALLHL-----KLDEAVDLFGEMVKSRPFP 63

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++V ++ L+  + K  +        ++M++ G+S N+ TYN +I+  C   +   A  + 
Sbjct: 64  SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++   G  PS+VT N L+  F        A  LV +M E G  P  VT+T L+    + 
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           +   +A  +   M   G  PD+ TYG +I+GLC +G    A  L N M + K+E + V+Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + +I   CK  +   AL L  EM+ KG+ P++ +YSS I  LC  G+W +A  LL+ ML+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303

Query: 554 LGLKPSVSLYNILYRA 569
             + P+V  +N L  A
Sbjct: 304 RKINPNVVTFNSLIDA 319



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 37/199 (18%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y ++I    ++   D A   F QM+  GV P   T+N+LL  + K+   +K  +
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471

Query: 163 FF------------------SENRCK------------------VELDVYSFGILIKGCC 186
            F                  SE  CK                  V+ DV ++  +I G C
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G   +A+ +  +++E G  P+   Y +LI    ++GD   +  L +++          
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS 591

Query: 247 TYTVLICGLFKNGLQKDGF 265
           TY  L+  +  +G    GF
Sbjct: 592 TYG-LVTDMLHDGRLDKGF 609


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 228/444 (51%), Gaps = 7/444 (1%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN----RCKVELDVYSFGILIKGC 185
           +QM   G+ P   T N   I +   C  ++    FS      +  ++ D  +F  LI+G 
Sbjct: 91  NQMDSFGIPPDVYTLN---ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL 147

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G +  A  + +++   GF PNVV Y +LI+G CK G+   A  L R + +       
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT +I  L K+    + F  + KM   G+SP ++TY  LIH  CN  +      L ++
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M + ++  +VV ++T++  LCKE ++ EA  ++D M + G+ PNV+TYN L+DG C   E
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 327

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A ++F+ +  NG +P+V++YN LI  + K      A+ L  EM ++ + P+ VTY  
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 387

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        ++ A  ++  M   G  PD+ TY +L+  LC K ++ EA  L  ++  + 
Sbjct: 388 LMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+  +Y ++I G C+ G    A  +   ++ KGL PN+ +Y+  I  LC+ G   EA 
Sbjct: 448 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 507

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M   G  P    YN + + 
Sbjct: 508 KLFMEMDGNGCSPDGCTYNTITQG 531



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 225/450 (50%), Gaps = 36/450 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           A     ++L  G++P + TF +L+    ++    D   LF        + +V ++G LI 
Sbjct: 121 AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C+ G+ N A  +L  +E+    P+VV+YTS+ID  CK+  +  A  LF K+   G+  
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 244 TQHTYTVLI------C-----------------------------GLFKNGLQKDGFEFY 268
              TYT LI      C                              L K G   +  +  
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M + GV P++ TYN L+  +C + ++ E  K+FD M H   A NV++YNTLI G CK 
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ +A  L ++M    + PN +TYN L+ G C  G    A  LF+++ ++GQ P + TY
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +L+    K  +   A  L++ +E   + P    YTI+ID   R+ ++E A +++S +  
Sbjct: 421 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+V TY ++I+GLC +G + EA+KLF  M      P+   YN +  G  +   + R
Sbjct: 481 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 540

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           A++LL EM  +G   ++++ +  + +LC D
Sbjct: 541 AIQLLQEMLARGFSADVSTTTLLVEMLCDD 570



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 189/389 (48%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  L+    +       F + NQ++  G  P+V     LI+  C       A  +  KI 
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           +LGL     T+T LI GL   G   D    ++KM   G  P++ TY  LI+  C  G  +
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
              +L   M       +VV Y ++I  LCK+ +V EA  L  +M   GISP++ TY  LI
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C+  E      L NQ+ ++   P VV ++ ++ A  K G    A D+V  M  RG+ 
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ VTY  L+D      +M++A +++  M  +G++P+V +Y  LI+G C    M +A+ L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M + +L PN V YN ++ G C  G    A+ L  EM   G +P++A+Y   +  LC+
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                EA  LL  +    + P + +Y I+
Sbjct: 430 KSHLDEAMALLKTIEGSNMDPDIQIYTIV 458



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 148/304 (48%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D    + +M      PS   +N L+       +    F L ++M    +  +V T N LI
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C   R   A  +L ++   G+ P+  T+  LI G C  G+   A  LF+++   G  
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  LI    K GN+  A  L+R ME+    P  V YT +IDS  +   + +AF +
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 229

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +S M   G SPD++TY  LIH LC     K  + L N M  +K+ P+ V+++ ++   CK
Sbjct: 230 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 289

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  ++  M  +G+ PN+ +Y++ +   C   +  EA  + + M+  G  P+V  
Sbjct: 290 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 349

Query: 563 YNIL 566
           YN L
Sbjct: 350 YNTL 353



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 10/267 (3%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F  + H       + +NTL           +A    ++M      P+ + +N+L+     
Sbjct: 30  FSSLSHNRFHSKSLNFNTL----------DDALSSFNRMLHMHPPPSTVDFNRLLTSIAK 79

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             +    F L NQ+ S G  P V T N+LI +F        A  ++ ++ + G+ P   T
Sbjct: 80  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTAT 139

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +T LI        +  A  ++  M   GF P+V TYG LI+GLC  GN   A +L  SM 
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 199

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           +   +P+ VVY  +I   CK+     A  L  +M  +G+ P+I +Y+S I  LC   +W 
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWK 259

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
               LLNQM+   + P V +++ +  A
Sbjct: 260 HVTTLLNQMINSKIMPDVVIFSTVVDA 286



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 122/275 (44%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N   + +    F+ M H     + V +N L+  + K  +      L +QM   GI P+V 
Sbjct: 44  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 103

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T N LI+ FC       AF +  ++   G  P   T+  LIR     G    A  L  +M
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P+ VTY  LI+   +  +   A  +   M++    PDV  Y  +I  LC    +
Sbjct: 164 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 223

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA  LF+ M    + P+   Y  +I   C          LL +M    ++P++  +S+ 
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  LC++GK  EA  +++ M+  G++P+V  YN L
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 105/207 (50%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +N L+ + +K         L  +M+  GI P   T  IL
Sbjct: 49  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 108

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF   +    AF + + + K G  PD  T+  LI GLC++G + +A  LF+ M     
Sbjct: 109 INSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 168

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK GN+  A+RLL  M +    P++  Y+S I  LC+D +  EA  
Sbjct: 169 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 228

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ P +  Y  L  +  N+
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNL 255


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 237/482 (49%), Gaps = 42/482 (8%)

Query: 119 SRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYS 177
           SRL  D+A+  F ++ D  V     + N LL  ++ +         F E       DV +
Sbjct: 236 SRLPLDEAIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFDE--MSSPPDVVT 289

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI-------------------- 217
           +G ++ G C  G+L  A ++L+++   G   N  +YTS+I                    
Sbjct: 290 YGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT 349

Query: 218 ---------------DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
                           G C  GD+  A+ LF ++ + GL A + T+T LI GL + G  K
Sbjct: 350 MHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELK 409

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +     ++M   G+   + TY  LI  YC  G + E F++ +EM  R VA NVVTY  L 
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCK+  V+ A  LL +M   G+  NV TYN LI+G C  G  ++A R+  ++++ G  
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
             V TY  LI    K+G    A ++++EM ++GI PS  TY +L++ F  S  +E   ++
Sbjct: 530 TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M +    P+V TY  L+   C+  NMK  ++++  M   ++ PN+  YN++I G+CK
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
             N   AL    EM EKGL    +SYS+ I +L +  K+ EA V  ++M   GL     +
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709

Query: 563 YN 564
           Y+
Sbjct: 710 YS 711



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 183/391 (46%), Gaps = 35/391 (8%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V LD   F  +I G C  GDL  A  +  ++++ G + + V +T+LI+G C+ G+++ A 
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            + +++ + GL     TYTVLI G  K G   + F  + +M    V+P++ TY  L    
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG----- 345
           C +G V    +L  EM ++ +  NV TYN+LI GLCK   +++A R++ +M+ AG     
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532

Query: 346 ------------------------------ISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
                                         I P++ TYN L++GFC +G  +   +L   
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +      P+VVTYN L++ +    N K  +++ + M  + + P+E TY ILI    ++ +
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           M++A   +  M + G      +Y  LI  L  K    EA   F+ M    L     VY+ 
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +     E N    + L  E+ E   V + A
Sbjct: 713 YMDISFNEDNLESTITLCDELVEASHVKSKA 743



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 183/399 (45%), Gaps = 10/399 (2%)

Query: 47  ISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKS 106
           +S  LR+L   M+ H  A    +   +ISG  +         L    Q    +++ VT +
Sbjct: 338 VSDALRVL-EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHT 396

Query: 107 RLYESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
            L   +  A  LK   +D+ L    +M+D G+     T+  L+    K  +  + +   +
Sbjct: 397 ALINGLCRAGELKE--ADRVL---QEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 166 E--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           E   R +V  +V ++  L  G C+ GD+  A E+L+++   G   NV  Y SLI+G CK 
Sbjct: 452 EMVGR-RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G++E+A  +  ++   G     +TYT LI  L K+G         ++M   G+ PS+ TY
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L++ +C  G+V  G KL + M  + V  NVVTYN+L+   C +  ++    +   M  
Sbjct: 571 NVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHS 630

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             ++PN  TYN LI G C A    +A     ++   G   +  +Y+ LIR  +K      
Sbjct: 631 QEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE 690

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           A     +M   G+T     Y+  +D     D++E    +
Sbjct: 691 ARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITL 729


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 235/480 (48%), Gaps = 36/480 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D A+  + +M   G++P   TF +L+  V            ++E  R   E DV S+  L
Sbjct: 145 DFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTL 204

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN------------------ 223
           I G C +G+ N A  V  ++E+ G  PNVV Y ++ID  CK+                  
Sbjct: 205 INGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264

Query: 224 -----------------GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                            G +  A  LF+++ + G      TY ++I  L+K+ L  D  +
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F  +M   G+ P + TY  ++H  C  G+++E  +LF +M  +    +VV YNT+I  LC
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K+  V +A   L +M   GI PN +TY+ ++ GFC+ G+ D+A +LF ++      P+ +
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+++L+    + G    A  +   M E+G+ P+  TY  L++ +     M +A +++ +M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G +PD+++Y +LI+G C    M +A  L   M   KL PN V YN ++ G C  G  
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L  +M   G++P + +YS  +  LC+ G   EA  L   M +  L+P + LY IL
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 209/399 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ DV +F  LI G C  G +  A E+ N++   G  P+V+ Y +LI+G C +G+   A 
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F+K+ + G      TY  +I  L K+ L  D  +F  +M   G+ P   TYN ++H  
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G+++E  +LF  M       +VVTYN +I  L K+  V +A   L +M   GI P+V
Sbjct: 279 CCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDV 338

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  ++ G C  G+ ++A RLF +++  G  P VV YN +I +  K      A + + E
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M +RGI P+ VTY+ ++  F     +++A +++  M      P+  T+ +L+ GLC +G 
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA  +F +M E  +EPN   YN ++ GYC       A ++   M  KG  P++ SY+ 
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I   C   +  +A+ LL QM    L P+   YN + + 
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 237/439 (53%), Gaps = 5/439 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +IID+  K RL + A+ +  +M+  G+ P + T+NS++  +      ++    F    
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +N CK   DV ++ I+I    +   +N A + L+++ + G  P+VV YT+++ G C  G 
Sbjct: 296 QNGCKP--DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  LF+K+ + G       Y  +I  L K+ L  D  EF  +M   G+ P+  TY+ 
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++H +CN G++ E  +LF EM  R V  N +T++ L+ GLC+E  V EA  + + M   G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN+ TYN L++G+C   + ++A ++F  +   G +P + +YN+LI  +  +     A 
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ +M  + +TP+ VTY  ++        +  A E++  M  SG  P + TY +L++GL
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G++ EA KLF SM E KLEP+ ++Y ++I G    G    A  L  +++  G+ P  
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPG 653

Query: 526 ASYSSTIGVLCQDGKWPEA 544
            +Y+  I  L ++G   EA
Sbjct: 654 RTYNVMIKGLLKEGLSDEA 672



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 216/445 (48%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGIL 181
           D AL  F++M     RP    F   L  + K   +    +L    +   V   VYS  IL
Sbjct: 75  DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ A  V  ++ ++G  P+V+ +T+LI+G C  G I+ A  L+ ++   G 
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +Y  LI GL  +G        ++KM+ NG  P++ TYN +I   C +  V++   
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
              EM  R +  + +TYN+++ GLC   ++ EA RL  +M+  G  P+V+TYN +ID   
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                + A    +++   G  P VVTY  ++      G    A  L ++ME++G  P  V
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y  +IDS  +   +  A E  S M   G  P+  TY  ++HG C  G + EA++LF  M
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               + PN + +++++ G C+EG    A  +   M EKG+ PNI +Y++ +   C   K 
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            EA  +   M+  G  P +  YNIL
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNIL 519



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 228/462 (49%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+    S  ++ A+  F +M  +G +P   T+N+++  + K    +    F SE  
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  D  ++  ++ G C  G LN+A  +  ++E+ G  P+VV Y  +ID   K+  + 
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A     ++ + G+     TYT ++ GL   G   +    ++KM+  G  P +  YN +I
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTII 380

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C +  V++  +   EM  R +  N VTY+T++ G C   ++ EA +L  +M    + 
Sbjct: 381 DSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVM 440

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +T++ L+DG C  G   +A  +F  +   G  P++ TYN L+  +        A  +
Sbjct: 441 PNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M  +G  P   +Y ILI+ +  S  M+KA  + + M     +P+  TY  ++ GLC 
Sbjct: 501 FEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCY 560

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A +LF  M  + + P  + Y++++ G CK G+   AL+L   M EK L P+I  
Sbjct: 561 VGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIIL 620

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  I  +   GK   A+ L +++   G++P    YN++ + 
Sbjct: 621 YTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKG 662



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 36/305 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID+  K RL + A+ +  +M+D G+ P + T++++L         D+    F E  
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  +  +F IL+ G C+ G +++A  V   + E G  PN+  Y +L++G C    + 
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495

Query: 228 RAKMLFRKIGELGLVATQHTYTVLI---C------------------------------- 253
            A+ +F  +   G     H+Y +LI   C                               
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555

Query: 254 -GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL   G   D  E ++KM  +G+ P+L TY+ L++  C  G + E  KLF  M+ +++ 
Sbjct: 556 KGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +++ Y  LI G+    +++ A+ L  ++   GI P   TYN +I G    G +D+A+ L
Sbjct: 616 PDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675

Query: 373 FNQLK 377
           F + K
Sbjct: 676 FRKWK 680



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 122/275 (44%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N   V +    F  M       ++V +   +  + K  +      L +QM + G++  V 
Sbjct: 70  NTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVY 129

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + N LI+  C     D A  ++ ++   G  P V+T+  LI      G  K+A +L  EM
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P  ++Y  LI+    S +   A  ++  M+++G  P+V TY  +I  LC    +
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A    + M    + P+ + YN ++ G C  G    A RL   M + G  P++ +Y+  
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  L +D    +A   L++M+  G+ P V  Y  +
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 3/254 (1%)

Query: 93  TQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           TQLF      N +  +  +  ++D   +  +  +A + F  M + GV P   T+N+L+  
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487

Query: 151 VIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
               C  ++    F     K    D++S+ ILI G C +  ++KA  +L Q+     +PN
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
            V Y +++ G C  G +  A+ LF+K+   G++ T  TY++L+ GL K+G   +  + ++
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFK 607

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
            M+   + P +  Y  LI      GK+     LF ++    +     TYN +I GL KE 
Sbjct: 608 SMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667

Query: 330 RVQEAERLLDQMKM 343
              EA  L  + KM
Sbjct: 668 LSDEAYELFRKWKM 681


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/516 (30%), Positives = 260/516 (50%), Gaps = 16/516 (3%)

Query: 23  LPPLKAFSLFN-WASRQGLQHTPQSISIILRLL-LSKMSSHSHAAAQTLILKIISGRITS 80
           LPP    S FN  ASR   +HT  S   +L  L L +M   +H    +L+  ++S + T+
Sbjct: 97  LPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAH----SLVSFLVSRKGTN 152

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           S+ T   L   + +  P   +      L ++++I A++ S  +  A+  F  +  +    
Sbjct: 153 SAST---LFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPV 209

Query: 140 RSNTFNSLLIFVIK--SCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 +LL  V++      ++ W  + E         +Y F +L+ G C+AGD+  A  
Sbjct: 210 PIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARL 269

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V +++ + G  P VV + +LI GCCK+GD+E    L   +   G+     T++ LI GL 
Sbjct: 270 VFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLC 329

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K G   +G   +++M   G+ P+  T+  LI   C  GKV    K F  M  + V  ++V
Sbjct: 330 KEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV 389

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYN LI GLCK   ++EA RL+++M  +G+ P+ IT+  LIDG C  G+ + A  +  ++
Sbjct: 390 TYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G     V +  LI    + G    A  ++ +M   G  P + TYT++ID F +  D+
Sbjct: 450 VEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDV 509

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           +  F++   MQ  G  P V TY  L++GLC +G MK A  L ++M    + PND+ YN++
Sbjct: 510 KMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNIL 569

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           + G+ K G+S          +EKGLV + ASY++ +
Sbjct: 570 LDGHSKHGSSVDVDIF---NSEKGLVTDYASYTALV 602



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 39/323 (12%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER---LL 338
            ++ LI  Y + G   +  + F  +   +    +     L+  + + +R  E ER   L 
Sbjct: 178 VFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVR-LRPVEIERSWALY 236

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            ++  +G  P +  +N L+ GFC AG+   A  +F+++   G  P+VV++N LI    K+
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 399 GNSK--------MASD---------------------------LVREMEERGITPSEVTY 423
           G+ +        M S+                           L  EM  RG+ P+ VT+
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T LID   +   ++ A + + +M   G  PD+ TY  LI+GLC  G++KEA +L N M  
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + L+P+ + +  +I G CK+G+   AL +   M E+G+  +  ++++ I  LC++G+  +
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A  +L  ML  G KP    Y ++
Sbjct: 477 AGRMLTDMLSAGFKPDDPTYTMV 499


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 271/553 (49%), Gaps = 12/553 (2%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P++A S F   S    + HT ++ + +L  L         AA    + K I  R   +  
Sbjct: 102 PIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYL 161

Query: 84  TP------RSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           T       R  L  +T +      +  V  +  Y  +I   ++S    +AL  + +M+  
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSE 221

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G++P   T+++L++ + K    +   +   E     +  +VY+F I I+    AG +++A
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +E+  ++++ G  P++V YT LID  C  G +E AK LF K+   G    Q  Y  L+  
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL-D 340

Query: 255 LFKNGLQKDGF-EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            F +    D F EF+ +M+ +G  P + T+  L+   C      E F  FD MR + +  
Sbjct: 341 KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N+ TYNTLICGL +  R+++A +LLD M+  G+ P   TY   ID F  +GET KA   F
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++K+ G  P++V  N  + + ++ G  + A  +   + E G+ P  VTY +++  + + 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +++A  + S M ++G  PDV     LI  L   G + EA ++F+ M + KL P  V Y
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++ G  KEG   +A+ L   M  K   PN  S+++ +   C++ +   A  + ++M  
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 554 LGLKPSVSLYNIL 566
           +  KP V  YN +
Sbjct: 641 MDCKPDVLTYNTV 653



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 232/502 (46%), Gaps = 40/502 (7%)

Query: 104 TKSRLYESIIDAHLKSRLSD--QALFYFHQMLD-SGVRPRSNTFNSLLIFV-IKSCSFDK 159
           T+ R+ E  +   LKS ++D  +AL YF+ + +   V   + T N +L F+ +     D 
Sbjct: 83  TEIRVSEDEVLGVLKS-MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDM 141

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
             +F    +  +  D+ ++  + K     G L +   VLN++ + GF  N   Y  LI  
Sbjct: 142 AAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHL 201

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             ++G    A  ++R++   GL  +  TY+ L+  L K    +      ++M+  G+ P+
Sbjct: 202 LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN 261

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL- 338
           +YT+   I      GK+ E +++F  M       ++VTY  LI  LC   +++ A+ L  
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 339 ----------------------------------DQMKMAGISPNVITYNKLIDGFCDAG 364
                                              QM+  G  P+V+T+  L+D  C A 
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+AF  F+ ++  G  P++ TYN LI    +AG  + A  L+  ME  G+ P+  TY 
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI 441

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
             ID F +S +  KA E +  M+  G  P++      ++ L   G ++EA  +FN + E 
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L P+ V YNMM+  Y K G    A+ LL EM   G  P++   +S I  L + G+  EA
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             + ++M  + L P+V  YN L
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTL 583



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 183/361 (50%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y ++       G + +   +  K+ + G V   ++Y  LI  L ++G   +  E Y +M 
Sbjct: 160 YLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 219

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ PSL TY+ L+     +        L  EM    +  NV T+   I  L +  ++ 
Sbjct: 220 SEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA  +  +M   G  P+++TY  LID  C+AG+ + A  LF ++K+NG  P  V Y  L+
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLL 339

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F+  G+     +   +ME  G  P  VT+TIL+D   ++ D ++AF  + +M+K G  
Sbjct: 340 DKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGIL 399

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+++TY  LI GL   G +++A KL ++M    ++P    Y   I  + K G + +A+  
Sbjct: 400 PNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVET 459

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             +M  KG+VPNI + ++++  L + G+  EA+ + N + + GL P    YN++ +  + 
Sbjct: 460 FEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSK 519

Query: 573 I 573
           +
Sbjct: 520 V 520



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 2/463 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + +++D   K+   + AL  F +M     +P   T+N+++  +IK    +  + FF + +
Sbjct: 615  FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   L+ G  + G +  A  +    + ++ F  N   +  L+ G     +++
Sbjct: 675  KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCL 286
            +A +   ++   G+         L+  L K+  +   ++ ++K     G+SP+L +YNCL
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I E        + + LF +M++   A +  T+N L+    K  ++ E   L  +M     
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             P+ ITYN +I     +   DKA   F  L S+   P+  TY  LI   +K G  + A  
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L  EM + G  P+   + ILI+ + +  D E A +++  M   G  PD+ +Y +L+  LC
Sbjct: 915  LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLC 974

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            + G + EA   FN +  T L+P+ + YN +I G  K      AL L  EM  +G+VP++ 
Sbjct: 975  LAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLY 1034

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+S +  L   G   +A+ +  ++   GL+P V  YN L R 
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 206/442 (46%), Gaps = 4/442 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCC 186
           ++ QM   G  P   TF  L+  + K+  FD+ +  F   R +  L +++++  LI G  
Sbjct: 354 FWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLL 413

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
            AG +  A ++L+ +E +G  P    Y + ID   K+G+  +A   F K+   G+V    
Sbjct: 414 RAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
                +  L + G  ++    +  ++ NG++P   TYN ++  Y   G+V E   L  EM
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  +V+  N+LI  L K  RV EA ++ D+MK   +SP V+TYN L+ G    G  
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRV 593

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            KA  LF  +     SP+ +++N L+  F K    ++A  +  +M      P  +TY  +
Sbjct: 594 QKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-MWETK 485
           I   ++ + +  AF  +  ++KS   PD  T   L+ GL   G + +A  +    M++ +
Sbjct: 654 IYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR 712

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              N   +  ++ G   E    +A+    E+   G+    +     + VLC+  +   A 
Sbjct: 713 FRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAY 772

Query: 546 VLLNQML-KLGLKPSVSLYNIL 566
            + ++   KLG+ P+++ YN L
Sbjct: 773 QIFDKFTKKLGISPTLASYNCL 794



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 261/616 (42%), Gaps = 54/616 (8%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISI-ILRLLLSKMS 59
           M  +     Q + + L+ +      L  F  F W+  +   + P  ++  IL  +L K  
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEF-WSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLT---------QLFPSSSNPVTKSRLYE 110
               A A   +++     I  +  T  +L+C L          +L  +  +   +   Y 
Sbjct: 382 DFDEAFATFDVMR--KQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439

Query: 111 SI--IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            I  ID   KS  + +A+  F +M   G+ P     N+ L  + +     +    F+  R
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  ++ +++K   + G +++A  +L+++   G  P+V++  SLID   K G ++
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F ++ ++ L  T  TY  L+ GL K G  +   E +E M     SP+  ++N L+
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   +V    K+F +M   +   +V+TYNT+I GL KE +V  A     Q+K + + 
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MH 678

Query: 348 PNVITYNKLIDGFCDAG------------------------------------ETDKAFR 371
           P+ +T   L+ G    G                                    E DKA  
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GITPSEVTYTILIDSF 430
              +L  NG          L+R   K      A  +  +  ++ GI+P+  +Y  LI   
Sbjct: 739 FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +     EKA++++  M+  G +PD +T+ +L+      G + E  +L+  M   + +P+ 
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN++I    K  N  +AL    ++      P   +Y   I  L + G+  EA  L  +
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G KP+ +++NIL
Sbjct: 919 MSDYGCKPNCAIFNIL 934



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 205/466 (43%), Gaps = 53/466 (11%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK------SCSFDKGWL 162
            Y ++I   +K    + A ++FHQ L   + P   T  +LL  ++K      + S  + ++
Sbjct: 650  YNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFM 708

Query: 163  F---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            +   F  NR   E        L+ G     +++KA     +L   G          L+  
Sbjct: 709  YQVRFRVNRSFWE-------DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 220  CCKNGDIERAKMLFRKIGE-LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             CK+     A  +F K  + LG+  T  +Y  LI  L +    +  ++ ++ M+  G +P
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 279  SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              +T+N L+  +   GK++E F+L+ EM  R    + +TYN +I  L K   + +A    
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 339  DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
              +  +   P   TY  LIDG    G  ++A RLF ++   G  P+   +N+LI  + K 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 399  GNSKMASDLVREMEERGITPSEVTYTILID-------------------------SFV-- 431
            G+++ A  L + M   GI P   +YTIL+D                          F+  
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 432  --------RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
                    +S  ME+A  +Y+ M+  G  PD+YTY  L+  L + G +++A +++  +  
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 484  TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
              LEP+   YN +I GY    N   A  +   M   G  PNI +Y+
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 6/341 (1%)

Query: 127  FYFHQMLDS-----GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGI 180
             Y +Q+ D      G+ P   ++N L+  +++    +K W  F + +      D ++F +
Sbjct: 769  LYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNM 828

Query: 181  LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            L+    ++G + + FE+  ++      P+ + Y  +I    K+ ++++A   F  +    
Sbjct: 829  LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888

Query: 241  LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
               T  TY  LI GL K G  ++    +E+M   G  P+   +N LI+ Y   G      
Sbjct: 889  FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948

Query: 301  KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +LF  M +  +  ++ +Y  L+  LC   RV EA    +++K  G+ P+ I YN++I+G 
Sbjct: 949  QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008

Query: 361  CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              +   ++A  L+N++++ G  P + TYN L+     AG  + A  +  E++  G+ P  
Sbjct: 1009 GKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 421  VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             TY  LI  +  S++ E A+ +Y  M   G +P++ TY  L
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            SS+     R Y  +ID   K    ++A+  F +M D G +P    FN L+    K    +
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 159  KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                 F     + +  D+ S+ IL+   C AG +++A    N+L+  G  P+ + Y  +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            +G  K+  +E A  L+ ++   G+V   +TY  L+  L   G+ +     YE++QL G+ 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            P ++TYN LI  Y         + ++  M       N+ TY  L
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 274/583 (46%), Gaps = 54/583 (9%)

Query: 23  LPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           L P  A  L +   R+G     + ++  L  L    SS +  +   L + + + R  S +
Sbjct: 47  LRPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFN-RAASRA 105

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
             PR L            +P   S  Y  ++D   ++   + AL +F Q+L +G+R    
Sbjct: 106 QGPRVL------------SPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDII 151

Query: 143 TFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
             N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A ++L  
Sbjct: 152 IANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM 211

Query: 201 LEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           + E G   SP+VV YT++ID   K GD+ +A  LF+++ + G+     TY+ ++  L K 
Sbjct: 212 MAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 271

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                   F  +M   GV P  +TYN LI+ Y + G+  E  ++F EMR   +  +VVT 
Sbjct: 272 RAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 331

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  LCK  +++EA  + D M M G +P+V +Y  +++G+   G       LF+ +  
Sbjct: 332 NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG 391

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           +G +P + T++VLI+A++  G    A  +  EM + G+ P  VTYT +I +  R   M+ 
Sbjct: 392 DGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDD 451

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL--------------------- 477
           A E ++ M   G +PD Y Y  LI G C  G++ +A +L                     
Sbjct: 452 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIIN 511

Query: 478 --------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
                         F+        P+ VVY+M++ GYC  G   +ALR+   M   G+ P
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N+  Y + +   C+ G+  E   L  +ML+ G+KPS  LYNI+
Sbjct: 572 NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 222/459 (48%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F +M+  G+ P   T++S++  + K+ +  K   F  +  
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L D +++  LI G    G   +A  V  ++      P+VV    L+   CK G I+
Sbjct: 286 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +Y +++ G    G   D  + ++ M  +G++P +YT++ LI
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G++
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   Y+ LI GFC  G   KA  L  ++ +NG    +V ++ +I    K G    A ++
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI 525

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G  P  V Y++L+D +     MEKA  ++  M  +G  P+V  YG L++G C 
Sbjct: 526 FDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  M +  ++P+ ++YN++I G    G +  A     EM E G+  N  +
Sbjct: 586 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCT 645

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  +    ++  + EA  L  ++  + +K  +   N +
Sbjct: 646 YNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 684



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 36/455 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++ A  K+R   +A  +  QM++ GV P + T+N+L+     +  + +    F E  
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG--- 224
           R  +  DV +  +L+   C+ G + +A +V + +   G +P+V  Y  +++G    G   
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380

Query: 225 ----------------DI----------------ERAKMLFRKIGELGLVATQHTYTVLI 252
                           DI                ++A ++F ++ + G+     TYT +I
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y Y+CLI  +C  G + +  +L  E+ +  + 
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  R+ +A+ + D     G  P+ + Y+ L+DG+C  G+ +KA R+
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM ++GI PS + Y I+ID    
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFV 620

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + +  TY +++ G        EA  LF  +    ++ + + 
Sbjct: 621 AGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIIT 680

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            N MI G  +      A  L   ++  GLVP + +
Sbjct: 681 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 161/342 (47%), Gaps = 9/342 (2%)

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R  G   L  T HTY +L+    +    +    F+ ++   G+   +   N L+  +C  
Sbjct: 104 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 163

Query: 294 GKVSEGFKLFDEMRHR--EVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI--S 347
            +  E     D + HR  E+ C  +V +Y+ L+  LC + +  +A+ LL  M   G   S
Sbjct: 164 KRTDEAL---DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 220

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+ Y  +ID F   G+ +KA  LF ++   G  P +VTY+ ++ A  KA     A   
Sbjct: 221 PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAF 280

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R+M  +G+ P   TY  LI  +  +   ++A  ++  M++    PDV T  +L+  LC 
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +KEA  +F++M      P+   Y +M+ GY  +G       L   M   G+ P+I +
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +S  I      G   +A ++ N+M   G+KP V  Y  +  A
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAA 442



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  +++  N L+ G C+  R  EA
Sbjct: 111 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP VV Y  +
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY+ ++ +  ++  M KA      M   G 
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD +TY  LI+G    G  KEA ++F  M    + P+ V  NM++   CK G    A  
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY   +      G   +   L + ML  G+ P +  +++L +A  
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409

Query: 572 N 572
           N
Sbjct: 410 N 410



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           LY  IID    +  +  A   FH+M +SG+     T+N +L    K+  FD+    F E 
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669

Query: 168 RC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
           R   V++D+ +   +I G  +   + +A ++   +   G  P VV
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVV 714



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFS 165
           +Y ++++ + K    D+ L  F +ML  G++P +  +N ++  +FV    +      F  
Sbjct: 575 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR-TVPAKVKFHE 633

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                + ++  ++ I+++G  +    ++A  +  +L  M    +++   ++I G  +   
Sbjct: 634 MTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 693

Query: 226 IERAKMLFRKIGELGLV 242
           +E AK LF  I   GLV
Sbjct: 694 VEEAKDLFASISRSGLV 710


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 248/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   ++A  +   M D G+ P   T+ +L+  + KS   ++      E  
Sbjct: 155 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 214

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C +++ +V  +  LI G    G+ ++AF+++ ++   G  PN + Y +L+ G CK G ++
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 274

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA +L +++          TY ++I G F++  +KD F    +M+  G+SP++YTY+ +I
Sbjct: 275 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G+  +   L +EM  + +  N   Y  LI G C+E  V  A  + D+M    + 
Sbjct: 335 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 394

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  YN LI G    G  +++ + F Q++  G  P+  TY+ LI  + K G+ + A  L
Sbjct: 395 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 454

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK----------------------------- 438
           V+ M + G+ P++V Y  L++S+ +SDD+EK                             
Sbjct: 455 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 514

Query: 439 ------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                 AF + S ++K+G  PDV+ Y  LI GLC   + ++A  + + M +  ++PN V 
Sbjct: 515 SGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 574

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK G+   A  +   +  KGLVPN  +Y+S I   C+ G    A  L N+ML
Sbjct: 575 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 634

Query: 553 KLGLKPSVSLYNIL 566
             G+ P   +Y++L
Sbjct: 635 ATGITPDAFVYSVL 648



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 247/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+A+ K R  D A     +M + G    + T+N L+  + +S + ++ + F  +  
Sbjct: 120 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 179

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------- 218
              +  D +++G LI G C++   N+A  +L+++      PNVV+Y +LID         
Sbjct: 180 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 239

Query: 219 --------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                                     G CK G ++RA +L +++          TY ++I
Sbjct: 240 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 299

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G F++  +KD F    +M+  G+SP++YTY+ +IH  C  G+  +   L +EM  + + 
Sbjct: 300 EGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 359

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N   Y  LI G C+E  V  A  + D+M    + P++  YN LI G    G  +++ + 
Sbjct: 360 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 419

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F Q++  G  P+  TY+ LI  + K G+ + A  LV+ M + G+ P++V Y  L++S+ +
Sbjct: 420 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 479

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           SDD+EK    +  M   G   D   YG+LIH L   GNM+ A ++ + + +    P+  V
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHV 539

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y+ +I G CK  +  +A  +L EM++KG+ PNI  Y++ I  LC+ G    A  + N +L
Sbjct: 540 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 599

Query: 553 KLGLKPSVSLYNIL 566
             GL P+   Y  L
Sbjct: 600 AKGLVPNCVTYTSL 613



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 205/383 (53%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+K    A  +   ++V   +   G SP+V  Y++LI+  CK  + + AK +  ++ E G
Sbjct: 88  LLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG 147

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY VLI GL ++G  ++ F F + M+  G+ P  +TY  LI+  C   + +E  
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 207

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L DEM   E+  NVV Y  LI G  +E    EA +++ +M  AG+ PN ITY+ L+ G 
Sbjct: 208 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+ D+A  L  Q+  +   P  +TYN++I    +  N K A  L+ EME  GI+P+ 
Sbjct: 268 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNV 327

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY+I+I    +S + EKA ++   M   G  P+ + Y  LI G C +GN+  A ++F+ 
Sbjct: 328 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 387

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  + P+   YN +IFG  K G    + +   +M E+GL+PN  +YS  I    ++G 
Sbjct: 388 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 447

Query: 541 WPEAEVLLNQMLKLGLKPSVSLY 563
              AE L+ +ML  GLKP+  +Y
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIY 470



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 226/459 (49%), Gaps = 3/459 (0%)

Query: 110 ESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-EN 167
           + ++D + KS R+ D A      M D G+ P     N+LL  ++++ +    W       
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVL-MMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV 109

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DVY++  LI+  C+  + + A +VL ++ E G   N V Y  LI G C++G +E
Sbjct: 110 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 169

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    + + + GLV    TY  LI GL K+    +     ++M    + P++  Y  LI
Sbjct: 170 EAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLI 229

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  EG   E FK+  EM    V  N +TY+ L+ GLCK  ++  A  LL QM      
Sbjct: 230 DGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHR 289

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITYN +I+G         AFRL +++++ G SP+V TY+++I    ++G  + ASDL
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G+ P+   Y  LI  + R  ++  A E++  M K    PD+Y Y  LI GL  
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++E++K F  M E  L PN+  Y+ +I GY K G+   A +L+  M + GL PN   
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y   +    +     +       ML  G+     +Y IL
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 508



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 224/460 (48%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID  ++   +D+A     +M+ +GV+P   T+++L+  + K    D+  L   + 
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     D  ++ ++I+G     +   AF +L+++E  G SPNV  Y+ +I G C++G+ 
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 343

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L  ++   GL      Y  LI G  + G      E ++KM    V P LY YN L
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G+V E  K F +M+ R +  N  TY+ LI G  K   ++ AE+L+ +M   G+
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + Y  L++ +  + + +K    F  +   G       Y +LI   S +GN + A  
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ E+E+ G  P    Y+ LI    ++ D EKAF +   M K G  P++  Y  LI GLC
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++  A  +FNS+    L PN V Y  +I G CK G+   A  L  EM   G+ P+  
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS         G   +A  L+ +M   G   S+S +N L
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNL 682



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 232/482 (48%), Gaps = 24/482 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  + +      A   F +M    V P    +NSL+  + K    ++   +F++ 
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + +  L + +++  LI G  + GDL  A +++ ++ + G  PN VIY  L++   K+ DI
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+    F+ + + G++     Y +LI  L  +G  +  F    +++ NG  P ++ Y+ L
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C      + F + DEM  + V  N+V YN LI GLCK   +  A  + + +   G+
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY  LIDG C  G+   AF L+N++ + G +P    Y+VL    S AG+ + A  
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM  RG   S  ++  L+D F +   M++  ++  ++   G  P+  T   +I GL 
Sbjct: 664 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 722

Query: 467 MKGNMKEASKLFNSMWETKLE-------------------PNDVVYNMMIFGYCKEGNSY 507
             G + E   +F  + +   E                   P DVV +M I  +CKEGN  
Sbjct: 723 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM-IRDHCKEGNLD 781

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPS-VSLYNI 565
           +AL L   +  K      +SY + +  LC+ GK  EA  LL +M K G L+P+ V+L  I
Sbjct: 782 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGI 841

Query: 566 LY 567
            +
Sbjct: 842 FW 843



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 2/186 (1%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S  +SP+V+  +VL+  + K+G  + A+++V  M +RG+ PS      L+   +R+D M 
Sbjct: 42  SGHRSPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMA 99

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
             +++   M  +G SPDVYTY  LI   C       A K+   M E     N V YN++I
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G C+ G    A     +M + GLVP+  +Y + I  LC+  +  EA+ LL++M    LK
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219

Query: 558 PSVSLY 563
           P+V +Y
Sbjct: 220 PNVVVY 225



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 37/255 (14%)

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP V+  + L+D +  +G    A  +   ++  G +PS+   N L++   +A    +   
Sbjct: 46  SPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWK 103

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M   GI+P   TY+ LI+++ +  + + A ++   M++ G   +  TY VLI GLC
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163

Query: 467 MKGNMK-----------------------------------EASKLFNSMWETKLEPNDV 491
             G ++                                   EA  L + M   +L+PN V
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VY  +I G+ +EGN+  A +++ EM   G+ PN  +Y + +  LC+ G+   A +LL QM
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 552 LKLGLKPSVSLYNIL 566
           ++   +P    YN++
Sbjct: 284 VRDSHRPDTITYNLI 298


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 245/467 (52%), Gaps = 9/467 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           Y +++    ++   ++A+  + Q++ D G  P   T+N +L  + K   F +    W   
Sbjct: 232 YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERM 291

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N    + D+ ++G +I G C + D++ A  V +++ + G  P+VVIY SL+ G C  G
Sbjct: 292 VAN--NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAG 349

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTY 283
            +  A   +  +   G +    +Y +++ GLF  G+     + +E ++ +  +SP + T+
Sbjct: 350 RVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTF 408

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + +IH  C +G  ++  ++ +E R      +  +Y+++I GLCK+ R+ +A +L +++ M
Sbjct: 409 STMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               PN   YN LI+GFC A +   A R+++Q+  N  SP+ +TYN LI    KA     
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE 528

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           AS   REM E+G      TY  LI    R   ++ A  +++ +   G   DV  + +LIH
Sbjct: 529 ASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588

Query: 464 GLCMKGNMKEASKLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           GLC  G + EAS+L + M E     PN V YN ++ G+ + G   +A  L   + E GLV
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLV 648

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+I SY++ I  LC   + PE   LLN+ML  G+ P+   +NIL RA
Sbjct: 649 PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 260/574 (45%), Gaps = 55/574 (9%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
           ++  P   + +  L L   +  ++   Q L+  ++    TSS     S L  L  + P  
Sbjct: 21  MKSEPDPATALAHLDLLVSTWPAYTPPQPLLFHLLRRLATSSP----SRLPRLLGILPRL 76

Query: 100 SNPVTKSRLYES----IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKS 154
            +   + R  ES    ++ A  ++ + D AL  F ++    G  P   + N+LL   +++
Sbjct: 77  RH---RPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRA 133

Query: 155 CSFDKGWLFFSE------NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
             F     FF+        R ++  ++ ++ I+++  C  GDL++A  + + L   G +P
Sbjct: 134 RRFSDADAFFASLSHGAFGR-RIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAP 192

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           + + Y++L+ G  KN  ++ A  L  ++    +      Y  L+ G F+NG  +     +
Sbjct: 193 DRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVW 252

Query: 269 EKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           E++  + G SP+L TYN ++   C  G   E   +++ M       +++TY T+I GLC+
Sbjct: 253 EQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCR 312

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL----------- 376
              V  A R+  +M   G+ P+V+ YN L+ GFC AG   +A++ ++ +           
Sbjct: 313 STDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSY 372

Query: 377 ------------------------KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
                                   K +  SP +VT++ +I    + G +  +  ++ E  
Sbjct: 373 NIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEAR 432

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G    E +Y+ +I    +   ++ A ++Y  +    F P+ + Y  LI+G C      
Sbjct: 433 TSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFS 492

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A ++++ M E    P  + YN +I G CK      A R   EM EKG + ++ +Y S I
Sbjct: 493 DAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+D K   A  L NQ+L  GL+  V ++NIL
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 2/398 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    +S   D A   + +M+ +G+ P    +NSLL     +    + W F+    
Sbjct: 303 YGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMS 362

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIE 227
                +V S+ I++KG  + G ++KA ++   LE +   SP++V ++++I G C+ G   
Sbjct: 363 VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFAN 422

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           ++  +  +    G    + +Y+ +I GL K+G   D  + YEK+ ++   P+ + YN LI
Sbjct: 423 KSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALI 482

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C   K S+  +++ +M   + +   +TYNTLI GLCK  +  EA R   +M   G  
Sbjct: 483 NGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCM 542

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V TY  LI G C   + D A  L+NQ+   G    VV +N+LI     AG    AS L
Sbjct: 543 LDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQL 602

Query: 408 VREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM+E+    P+ VTY  L+D F  +   +KA  ++  + ++G  PD+ +Y   I GLC
Sbjct: 603 LSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLC 662

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                 E  +L N M  + + P  + +N+++    K G
Sbjct: 663 SCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 2/229 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y ++I+   ++     A+  + QM ++   P + T+N+L+  + K+  + +   F  
Sbjct: 475 SHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTR 534

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   K   LDV ++G LI+G C    ++ A  + NQ+ + G   +VV++  LI G C  G
Sbjct: 535 EMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAG 594

Query: 225 DIERAKMLFRKIGELG-LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            ++ A  L  ++ E         TY  L+ G ++ G        +  +  NG+ P + +Y
Sbjct: 595 KVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISY 654

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           N  I   C+  +  EG +L +EM    +    +T+N L+  + K   +Q
Sbjct: 655 NTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 6/245 (2%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           L  K+S  S      +   +I+G   +S F+    +   +Q+  +  +P T +  Y ++I
Sbjct: 462 LYEKISMDSFKPNSHIYNALINGFCQASKFS--DAIRVYSQMAENDCSPTTIT--YNTLI 517

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VE 172
               K+    +A  +  +ML+ G     NT+ SL+  + +    D     +++   K ++
Sbjct: 518 HGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQ 577

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKM 231
            DV    ILI G C AG +++A ++L++++E     PNVV Y +L+DG  + G  ++A  
Sbjct: 578 TDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAAS 637

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+  I E GLV    +Y   I GL       +G +   +M  +G+ P+  T+N L+    
Sbjct: 638 LWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVI 697

Query: 292 NEGKV 296
             G +
Sbjct: 698 KYGPI 702


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 276/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 52  REGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN-RA 110

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P + +  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 111 ASRAQGPRVL------------SPTSHT--YAILMDCCTRAHRPELALAFFGQLLRTGLR 156

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A +
Sbjct: 157 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SPNVV Y ++IDG  K GD+ +A  LF+++ + G+     TY  ++  
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M    V P+ +TYN LI+ Y + G+  E  ++F EMR   +  +
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT + L+  LCK  +++EA  + D M M G +P+V +YN +++G+   G       LF+
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P   T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G +PD Y Y  LI G C  G++ +A +L                 
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P+ VVY+M++ GYC  G   +ALR+   M   
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN+  Y + +   C+ G+  E   L  +ML+ G+KPS  LY+I+
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 623



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 239/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++ A  K+R  D+A  +  QM++  V P + T+N+L+     +  + +    F E  
Sbjct: 270 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 329

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-----CCK 222
           R  +  DV +  +L+   C+ G + +A +V + +   G +P+V  Y  +++G     C  
Sbjct: 330 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 389

Query: 223 N------------------------------GDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +                              G +++A ++F ++ + G+     TY  +I
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 449

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y YNCLI  +C  G + +  +L  E+ +  + 
Sbjct: 450 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  RV +A+ + D     G+ P+ + Y+ L+DG+C  G+ +KA R+
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM +RGI PS + Y+I+ID   +
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 629

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + D+ TY +++ GL       EA  LF  +    ++ N + 
Sbjct: 630 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 689

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++   LVPN+ +YS  I  L ++G   EAE + + M 
Sbjct: 690 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749

Query: 553 KLGLKPSVSLYNILYR 568
             G +P+  L N + R
Sbjct: 750 NAGCEPNSRLLNHVVR 765



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 230/460 (50%), Gaps = 3/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   K    ++A   F +M+  G+ P   T+NS++  + K+ + DK   F  +  
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N+ +V  + +++  LI G    G   +A  V  ++      P+VV  + L+   CK G I
Sbjct: 295 NK-RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      +Y +++ G    G   D  + ++ M  +G++P  YT+N L
Sbjct: 354 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G+
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+   YN LI GFC  G   KA  L +++ +NG    +V ++ +I    K G    A +
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +       G+ P  V Y++L+D +     MEKA  ++  M  +G  P+V  Y  L++G C
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 593

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + E   LF  M +  ++P+ ++Y+++I G  + G +  A     EM E G+  +I 
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDIC 653

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  +  L ++  + EA  L  ++  + +K ++   N +
Sbjct: 654 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+ DV ++  +I   C 
Sbjct: 395 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 454

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G +P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++ +I  L K G   D    ++     G+ P    Y+ L+  YC  GK+ +  ++FD M 
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  NVV Y TL+ G CK  R+ E   L  +M   GI P+ I Y+ +IDG   AG T 
Sbjct: 575 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G +  + TYN+++R   K      A  L +E+    +  + +T   +I
Sbjct: 635 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 694

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   ++  +E+A ++++ + +S   P+V TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 695 DGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           PN  + N ++    K+    RA   L +++E+
Sbjct: 755 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 199/406 (49%), Gaps = 1/406 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +I A+    + D+A+  F++M D GV+P   T+ +++  + +    D     F++  
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  D Y++  LI+G C  G L KA E+++++   G   ++V ++S+I+  CK G + 
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F     +GL      Y++L+ G    G  +     ++ M   G+ P++  Y  L+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC  G++ EG  LF EM  R +  + + Y+ +I GL +  R   A+    +M  +GI+
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            ++ TYN ++ G       D+A  LF +L++     +++T N +I    +    + A DL
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              +    + P+ VTY+I+I + ++   +E+A +M+S MQ +G  P+      ++  L  
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           K  +  A    + + E       +   +++  +  +G     +R L
Sbjct: 770 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  N++  N L+ G C+  R  EA
Sbjct: 120 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 178

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP+VV YN +
Sbjct: 179 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 238

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY  ++ +  ++  M+KA      M     
Sbjct: 239 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 298

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ +TY  LI+G    G  KEA ++F  M    + P+ V  +M++   CK G    A  
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P    +N+L +A  
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 418

Query: 572 N 572
           N
Sbjct: 419 N 419



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           LY  IID   ++  +  A   FH+M +SG+     T+N +L  + K+  FD+    F E 
Sbjct: 619 LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678

Query: 168 RC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   V++++ +   +I G  +   + +A ++   +      PNVV Y+ +I    K G +
Sbjct: 679 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLV 738

Query: 227 ERAKMLFRKIGELG 240
           E A+ +F  +   G
Sbjct: 739 EEAEDMFSSMQNAG 752


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 238/457 (52%), Gaps = 8/457 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVY 176
           +S  +D+A    H ++  G    + + N+LL  + ++  F +     +E +   ++ +V 
Sbjct: 282 RSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVV 341

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQL---EEMGF--SPNVVIYTSLIDGCCKNGDIERAKM 231
           +FGILI   C+   +++A EV  ++   E  GF   P+V+ Y +LIDG CK G  E    
Sbjct: 342 TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401

Query: 232 LFRKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           L  ++  +   +    TY  LI G  K  + +   E +++M  +GV P++ T N L+   
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G+++   + F+EM+ + +  N VTY  LI   C    +++A  L D+M  AG SP+ 
Sbjct: 462 CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDA 521

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           I Y  LI G   AG+ D+A  + +++K  G SP +V++NVLI  F +      A ++++E
Sbjct: 522 IVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKE 581

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ME  GI P  VTY  LI  F ++ D   A  +   M K G  P V TYG LIH  C+ GN
Sbjct: 582 MENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN 641

Query: 471 MKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           + EA K+F  M  T K+ PN V+YN++I   C++     AL L+ +M  KG+ PN  +++
Sbjct: 642 LDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFN 701

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +    L +     +A  L+++M +    P      IL
Sbjct: 702 AMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/575 (29%), Positives = 269/575 (46%), Gaps = 40/575 (6%)

Query: 25  PLKAFSL---FNWASRQGLQHTPQSISIILRLLLSKMSSH---SHAAAQTLILKIISGRI 78
           PL +F+L   F  ASR+     P S + +L L  +  S     S  AA  LI      ++
Sbjct: 120 PLLSFTLEAVFEHASRE-----PNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQM 174

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
              SF   + LC   +L          + +   +ID   +    D AL    +ML     
Sbjct: 175 VDESFLVYNELCPSRRL----------THIRNILIDVLFRKGRVDDALHLLDEMLQPKAE 224

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV-----ELDVYSFGI----LIKGCCEAG 189
              N+    ++F   S     G     E    +     E +V+   I    LI   C +G
Sbjct: 225 FPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSG 284

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
             ++A++VL+ L ++G         +L+    +  + +R   L  ++ E+ +     T+ 
Sbjct: 285 RTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFG 344

Query: 250 VLICGLFKNGLQKDGFEFYEKM---QLNG--VSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           +LI  L K     +  E +EKM   + NG  V P + TYN LI   C  G+  EG  L +
Sbjct: 345 ILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVE 404

Query: 305 EMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            MR +     N VTYN LI G CK   ++ A  L DQM   G+ PNV+T N L+DG C  
Sbjct: 405 RMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKH 464

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  + A   FN+++  G   + VTY  LIRAF    N + A +L  EM E G +P  + Y
Sbjct: 465 GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVY 524

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI    ++  +++A  + S M+++GFSPD+ ++ VLI+G C K  + EA ++   M  
Sbjct: 525 YTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             ++P+ V YN +I  + K G+   A RL+ +M ++GLVP + +Y + I   C +G   E
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644

Query: 544 AEVLLNQMLKLG-LKPSVSLYNILYRA---KNNIE 574
           A  +   M     + P+  +YNIL  +   KN ++
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVD 679



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 240/497 (48%), Gaps = 21/497 (4%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           + F P S   H+     S  + V ++   E I+   L S+ ++  +F           P 
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVG--LVSKFAEHEVF-----------PN 269

Query: 141 SNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           S     L+  + +S   D+ W +     +    ++  S   L+     A +  +   +L 
Sbjct: 270 SIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLA 329

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI--GEL-GLVATQH--TYTVLICG 254
           +++EM   PNVV +  LI+  CK   ++ A  +F K+  GE  G +      TY  LI G
Sbjct: 330 EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389

Query: 255 LFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           L K G Q++G    E+M+      P+  TYNCLI  YC    +    +LFD+M    V  
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVVT NTL+ G+CK  R+  A    ++M+  G+  N +TY  LI  FC+    +KA  LF
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++   G SP  + Y  LI   S+AG    AS ++ +M+E G +P  V++ +LI+ F R 
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           + +++A+EM   M+ +G  PD  TY  LI      G+   A +L   M +  L P  V Y
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVP-NIASYSSTIGVLCQDGKWPEAEVLLNQML 552
             +I  YC  GN   A+++  +M+    VP N   Y+  I  LC+  +   A  L++ M 
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 553 KLGLKPSVSLYNILYRA 569
             G+KP+ + +N +++ 
Sbjct: 690 VKGVKPNTNTFNAMFKG 706



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 6/372 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           Y ++ID   K    ++ L    +M       P + T+N L+    K+   +     F + 
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM 442

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N+  V  +V +   L+ G C+ G +N A E  N+++  G   N V YT+LI   C   +I
Sbjct: 443 NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNI 502

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  LF ++ E G       Y  LI GL + G          KM+  G SP + ++N L
Sbjct: 503 EKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +C + K+ E +++  EM +  +  + VTYNTLI    K      A RL+ +M   G+
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMAS 405
            P V+TY  LI  +C  G  D+A ++F  + S  +  P+ V YN+LI +  +     +A 
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ +M+ +G+ P+  T+  +       + + KAFE+   M +   +PD  T  +L   L
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742

Query: 466 CMKGNMKEASKL 477
              G   E +KL
Sbjct: 743 SAVG---ETAKL 751



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 37/341 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID + K+ + + A   F QM   GV P   T N+L+  + K    +    FF+E +
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ +  ++  LI+  C   ++ KA E+ +++ E G SP+ ++Y +LI G  + G ++
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN----------------GLQKDGFEF---- 267
           RA  +  K+ E G      ++ VLI G  +                 G++ DG  +    
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 268 ---------------YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH-REV 311
                           +KM   G+ P++ TY  LIH YC  G + E  K+F +M    +V
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             N V YN LI  LC++ +V  A  L+D MK+ G+ PN  T+N +  G  +     KAF 
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           L +++  +  +P  +T  +L    S  G +      V+  E
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 170/590 (28%), Positives = 280/590 (47%), Gaps = 51/590 (8%)

Query: 25  PLKAFSLFN-WASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +AFS FN  A    + HT ++ + +L +L +            L+ K I  R  ++  
Sbjct: 102 PNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYL 161

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRL-----------YESIIDAHLKSRLSDQALFYFHQM 132
           T   +L     L      PV   ++           Y  +I   LKS    +AL  + +M
Sbjct: 162 TIFKVLYIRGGL---REAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           +  G++P   T+++L++ + K    +       E     +  ++Y+F I I+    AG +
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++A+ +L ++++ G  P+VV YT LID  C  G +  AK LF K+        + TY  L
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITL 338

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +     +G      EF+ +M+ +G  P + T+  LI   C  GKV E F   D M+ + V
Sbjct: 339 LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGV 398

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A N+ TYNTLICGL +  R+ EA  L + M+  G+     TY   ID +  +GE+ KA +
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 372 LFNQLKSNGQSPSVV-----------------------------------TYNVLIRAFS 396
            F ++K+NG  P++V                                   TYN+L+R + 
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KAG    A  L+ EMEE G  P  V    LID+  ++D +++A++M+  M++   +P V 
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  L+ GL  +G ++EA+ LF  M      PN + +N ++   CK G    AL++L  M
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM 638

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            E    P++ +Y++ I  L ++ +   A  L +QM K+     V+L  +L
Sbjct: 639 TEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLL 688



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 190/372 (51%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V N +++     ++  Y ++       G +  A +   K+ ++G V   ++Y  LI  L 
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLL 203

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K+G  ++  + Y +M   G+ PSL TY+ L+        +     L  EM    +  N+ 
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T+   I  L +  ++ EA  +L +M  AG  P+V+TY  LID  C+AG+ + A  LF ++
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K++   P  VTY  L+  FS  G+     +   EME  G  P  VT+TILID+  +   +
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++AF    +M+K G +P+++TY  LI GL     + EA +LFNSM    LE     Y + 
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  Y K G S +A++   +M   G+VPNI + ++++  L + G+  EA+   N + K GL
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503

Query: 557 KPSVSLYNILYR 568
            P    YNIL R
Sbjct: 504 APDAITYNILMR 515



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 215/463 (46%), Gaps = 2/463 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + +++D   K+   D AL    +M +    P   T+N+++  +IK    +  +  F + +
Sbjct: 615  FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   L+ G  + G +  AF V  + +  +G   +   +  L+ G     +I 
Sbjct: 675  KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIG 734

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCL 286
            ++ +    +    +         L+  L K+G   D +  + K+  +  ++PSL  YN L
Sbjct: 735  QSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSL 794

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I            + LF +M++     +V TYN  +  L K  +++E   L ++M   G 
Sbjct: 795  IDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGC 854

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             PN IT+N +I G   +   DKA  L+  L S   SP+  TY  LI    K G  + A  
Sbjct: 855  KPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQ 914

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
               EM + G  P+   Y IL++ F +  D+E A E++  M K G  PD+ +Y +++  LC
Sbjct: 915  FFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLC 974

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            M G + +A   F  +  + L+P+ V YN+MI G  +      AL L  EM  +G+ P++ 
Sbjct: 975  MVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLY 1034

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y++ I  L   G   EA  +  ++   GL+P+V  YN L R 
Sbjct: 1035 TYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 174/350 (49%), Gaps = 1/350 (0%)

Query: 181  LIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+K  C+ G    A+ V  +L +    +P++  Y SLIDG  K    E A  LF K+   
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 240  GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            G      TY + +  L K+G  K+ F+ YE+M   G  P+  T+N +I        + + 
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 300  FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
              L+ ++   + +    TY  LI GL K  R++EA++  ++M   G  PN   YN L++G
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            F   G+ + A  LF ++   G  P + +Y++++      G    A     E++  G+ P 
Sbjct: 938  FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997

Query: 420  EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             V Y ++I+   RS  +E+A  ++  M+  G +PD+YTY  LI  L + G ++EA K++ 
Sbjct: 998  LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057

Query: 480  SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
             +    LEPN   YN +I G+   GN  RA  +  +M   G  PN  +++
Sbjct: 1058 ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFA 1107



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 210/461 (45%), Gaps = 4/461 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           +IDA  K    D+A      M   GV P  +T+N+L+  +++    D+   LF S     
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E   Y++ + I    ++G+  KA +   +++  G  PN+V   + +    + G +E AK
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAK 492

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             F  + + GL     TY +L+    K G   D  +   +M+ NG  P +   N LI   
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
               +V E +K+F  M+  ++A  VVTYNTL+ GL KE RVQEA  L   M      PN 
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           I++N L+D  C  GE D A ++  ++      P V+TYN +I    K      A  L  +
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKG 469
           M+ + I P  VT   L+   ++   +E AF +    +   G   D   +  L+ G+ ++ 
Sbjct: 673 MK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEA 731

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK-GLVPNIASY 528
            + ++     S+    +  +D V   ++   CK G +  A  +  ++ +   + P++ +Y
Sbjct: 732 EIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAY 791

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +S I  L +      A  L  +M   G  P V  YN+   A
Sbjct: 792 NSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDA 832



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 168/321 (52%), Gaps = 5/321 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
            Y S+ID  LK+RL++ A   F++M ++G  P   T+N  L  + KS    + +  + E  
Sbjct: 791  YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850

Query: 167  -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
               CK   +  +  I+I G  ++  L+KA ++   L    FSP    Y  LIDG  K G 
Sbjct: 851  FRGCKP--NTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +E AK  F ++ + G +     Y +L+ G  K G  +   E + +M   G+ P L +Y+ 
Sbjct: 909  LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            ++   C  GKV +    F+E++   +  ++V YN +I GL +  RV+EA  L D+M+  G
Sbjct: 969  MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            I+P++ TYN LI     AG  ++A +++ +L+  G  P+V TYN LIR  S +GN   A 
Sbjct: 1029 ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAY 1088

Query: 406  DLVREMEERGITPSEVTYTIL 426
             + ++M   G  P+  T+  L
Sbjct: 1089 AVYKKMMVGGCRPNTGTFAQL 1109



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 34/199 (17%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            LY  +++   K    + A   F +M+  G+RP                            
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRP---------------------------- 961

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                  D+ S+ I++   C  G ++ A     +L+  G  P++V Y  +I+G  ++  +E
Sbjct: 962  ------DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A  LF ++   G+    +TY  LI  L   G+ ++  + YE++QL G+ P+++TYN LI
Sbjct: 1016 EALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALI 1075

Query: 288  HEYCNEGKVSEGFKLFDEM 306
              +   G     + ++ +M
Sbjct: 1076 RGHSMSGNPDRAYAVYKKM 1094



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 13/215 (6%)

Query: 365 ETDKAFRLFNQLKSNGQSPSVV----TYNV---LIRAFSKAGNSKMASDLVREMEERGIT 417
           + ++AF  FN   S  + P V+    T N    ++RA  +  +  +  +L   M+++ I 
Sbjct: 101 DPNQAFSFFN---SVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNL---MQKQIIK 154

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
            S  TY  +         + +A      M+K GF  + Y+Y  LIH L   G  +EA K+
Sbjct: 155 RSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKV 214

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           +  M    ++P+   Y+ ++    K  +    + LL EM   GL PNI +++  I +L +
Sbjct: 215 YRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGR 274

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            GK  EA  +L +M   G  P V  Y +L  A  N
Sbjct: 275 AGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCN 309


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 282/559 (50%), Gaps = 38/559 (6%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           +LP L A  L +   R+G++ + Q+ + +L  L S+  S    A+  +   +I  R+  +
Sbjct: 149 RLPHLAAQLLHSLRRRRGVRPSLQAANAVLSAL-SRSPSTLPQASLDVFRSLIELRLHPN 207

Query: 82  SFTPRSLLCHL----------------TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
            +T  +LL H                  Q F  S + VT    Y ++++AH +  +  +A
Sbjct: 208 HYT-FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT----YNTLLNAHCRKGMLGEA 262

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWL------FFSENRCKVELDVYSF 178
                +M   G+ P   T+N+L+       +F + GW+        S      E D+ ++
Sbjct: 263 RALLARMKRDGIAPTQPTYNTLV------SAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
            +L  G C+AG +++AF + +++E +  + P+VV Y +L+D C K      A  L  ++ 
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G+  T  T+ +++  L K G  ++     EK+   G++P + TYN LI  YC  G V+
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           + F L DEM  + +  +  T NT++  LCK  R ++AE LL      G  P+ ++Y  ++
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVM 496

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             +      + A RL++Q+      PS+ TYN LI+   +    K A D + E+ E+G+ 
Sbjct: 497 AAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLV 556

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P E TY I+I ++ +  D+E AF  ++ M ++ F PDV T   L++GLC+ G + +A KL
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616

Query: 478 FNSMWETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           F S W  K +  DV+ YN +I   CK G+   AL    +M  KGL P+  +Y+  +  L 
Sbjct: 617 FES-WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675

Query: 537 QDGKWPEAEVLLNQMLKLG 555
           + G+  EA  +L+++   G
Sbjct: 676 EAGRSEEAHNMLHKLADSG 694



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 36/374 (9%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +FR + EL L    +T+ +L+      G   D       MQ  G+SP   TYN L++ +C
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHC 254

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G + E   L   M+   +A    TYNTL+    +   +++A ++++ M   G  P++ 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           TYN L  G C AG+ D+AFRL ++++    + P VVTYN L+ A  K   S  A  L+ E
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++G+ P+ VT+ I++ S  +   +E+A      + + G +PDV TY  LI   C  GN
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 471 MKEASKLFNSM------------------------WETKLE-----------PNDVVYNM 495
           + +A  L + M                        +E   E           P++V Y  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++  Y KE N   ALRL  +M E+ L+P+I++Y++ I  LC+  +  EA   LN++++ G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 556 LKPSVSLYNILYRA 569
           L P  + YNI+  A
Sbjct: 555 LVPDETTYNIIIHA 568



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 55/440 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSEN 167
           Y +++DA  K R S  AL    +M D GV+P   T N     V+KS C   K      E 
Sbjct: 352 YNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN----IVVKSLCKEGK----LEEA 403

Query: 168 RCKVE--------LDVYSFGILIKGCCEAGDLNKAFEVLNQL------------------ 201
             K+E         DV ++  LI   C+AG++ KAF +++++                  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 202 ----------EEM-------GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                     EE+       GF P+ V Y +++    K  + E A  L+ ++ E  L+ +
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY  LI GL +    K+  +   ++   G+ P   TYN +IH YC EG +   F+  +
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           +M       +VVT NTL+ GLC   ++ +A +L +     G   +VITYN LI   C  G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D A   F+ ++  G  P   TYNV++ A S+AG S+ A +++ ++ + G         
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACP 703

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPD--VYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +L  S     D+ K  E     + S  + D  + TY   ++GLC  G +KEA  + + M 
Sbjct: 704 LLKPSSADEADV-KEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMM 762

Query: 483 ETKLEPNDVVYNMMIFGYCK 502
           +  +  +   Y  ++ G  K
Sbjct: 763 QKGMPVDSSTYITLMEGLIK 782


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 276/587 (47%), Gaps = 54/587 (9%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R   L P +A  L +   R+G     + ++  L  L    SS +  +   L + + + R 
Sbjct: 39  REGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFN-RA 97

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
            S +  PR L            +P + +  Y  ++D   ++   + AL +F Q+L +G+R
Sbjct: 98  ASRAQGPRVL------------SPTSHT--YAILMDCCTRAHRPELALAFFGQLLRTGLR 143

Query: 139 PRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                 N LL    ++   D+    L           DV+S+ IL+K  C+ G   +A +
Sbjct: 144 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 197 VLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +L  + E G   SPNVV Y ++IDG  K GD+ +A  LF+++ + G+     TY  ++  
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K         F  +M    V P+ +TYN LI+ Y + G+  E  ++F EMR   +  +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT + L+  LCK  +++EA  + D M M G +P+V +YN +++G+   G       LF+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +  +G +P   T+NVLI+A++  G    A  +  EM + G+ P  VTY  +I +  R  
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL----------------- 477
            M+ A E ++ M   G +PD Y Y  LI G C  G++ +A +L                 
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 478 ------------------FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                             F+      L P+ VVY+M++ GYC  G   +ALR+   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ PN+  Y + +   C+ G+  E   L  +ML+ G+KPS  LY+I+
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 230/460 (50%), Gaps = 3/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   K    ++A   F +M+  G+ P   T+NS++  + K+ + DK   F  +  
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N+ +V  + +++  LI G    G   +A  V  ++      P+VV  + L+   CK G I
Sbjct: 282 NK-RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G      +Y +++ G    G   D  + ++ M  +G++P  YT+N L
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 400

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y N G + +   +F+EMR   V  +VVTY T+I  LC+  ++ +A    +QM   G+
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+   YN LI GFC  G   KA  L +++ +NG    +V ++ +I    K G    A +
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +       G+ P  V Y++L+D +     MEKA  ++  M  +G  P+V  Y  L++G C
Sbjct: 521 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 580

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + E   LF  M +  ++P+ ++Y+++I G  + G +  A     EM E G+  +I 
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDIC 640

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  +  L ++  + EA  L  ++  + +K ++   N +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 239/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++ A  K+R  D+A  +  QM++  V P + T+N+L+     +  + +    F E  
Sbjct: 257 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-----CCK 222
           R  +  DV +  +L+   C+ G + +A +V + +   G +P+V  Y  +++G     C  
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 223 N------------------------------GDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +                              G +++A ++F ++ + G+     TY  +I
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+P  Y YNCLI  +C  G + +  +L  E+ +  + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V ++++I  LCK  RV +A+ + D     G+ P+ + Y+ L+DG+C  G+ +KA R+
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L REM +RGI PS + Y+I+ID   +
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 616

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + D+ TY +++ GL       EA  LF  +    ++ N + 
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N MI G  +      A  L   ++   LVP++ +YS  I  L ++G   EAE + + M 
Sbjct: 677 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 553 KLGLKPSVSLYNILYR 568
             G +P+  L N + R
Sbjct: 737 NAGCEPNSRLLNHVVR 752



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 1/392 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML  G+ P   TFN L+         DK  + F+E R   V+ DV ++  +I   C 
Sbjct: 382 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E  NQ+ + G +P+   Y  LI G C +G + +AK L  +I   G+      
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++ +I  L K G   D    ++     G+ P    Y+ L+  YC  GK+ +  ++FD M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  NVV Y TL+ G CK  R+ E   L  +M   GI P+ I Y+ +IDG   AG T 
Sbjct: 562 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A   F+++  +G +  + TYN+++R   K      A  L +E+    +  + +T   +I
Sbjct: 622 PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   ++  +E+A ++++ + +S   P V TY ++I  L  +G ++EA  +F+SM     E
Sbjct: 682 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           PN  + N ++    K+    RA   L +++E+
Sbjct: 742 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 210/444 (47%), Gaps = 3/444 (0%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFH 130
           + S  I  + +  +  L  +T LF            Y    +I A+    + D+A+  F+
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M D GV+P   T+ +++  + +    D     F++   + V  D Y++  LI+G C  G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 478

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA E+++++   G   ++V ++S+I+  CK G +  A+ +F     +GL      Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 538

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G    G  +     ++ M   G+ P++  Y  L++ YC  G++ EG  LF EM  R
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR 598

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  + + Y+ +I GL +  R   A+    +M  +GI+ ++ TYN ++ G       D+A
Sbjct: 599 GIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF +L++     +++T N +I    +    + A DL   +    + PS VTY+I+I +
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++   +E+A +M+S MQ +G  P+      ++  L  K  +  A    + + E      
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
            +   +++  +  +G     +R L
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +SP+ +TY  L+ + C      E     F ++    +  N++  N L+ G C+  R  EA
Sbjct: 107 LSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 165

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVL 391
            + LL +    G  P+V +Y+ L+   CD G++ +A  L   +   G   SP+VV YN +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 225

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F K G+   A DL +EM +RGI P  VTY  ++ +  ++  M+KA      M     
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 285

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+ +TY  LI+G    G  KEA ++F  M    + P+ V  +M++   CK G    A  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +   M  KG  P++ SY+  +      G   +   L + ML  G+ P    +N+L +A  
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 405

Query: 572 N 572
           N
Sbjct: 406 N 406


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 204/396 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G C+ G+L +  +++ +++  G  PN   Y  +I   CK G +  A+ + 
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++   G+      YT LI G  K G     +  +++MQ   +SP   TY  +I   C  
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V E  KLF EM  + +  + VTY  LI G CKE +++EA  L +QM   G++PN++TY
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L DG C  GE D A  L +++   G   ++ TYN L+    KAGN   A  L+++ME 
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P  VTYT L+D++ +S +M +A E+   M      P V T+ VL++G CM G +++
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             KL   M E  + PN   YN +I  YC   N      +   M  KG+VP+  +Y+  I 
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+     EA  L   M+  G   +VS YN L + 
Sbjct: 647 GHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 682



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 248/491 (50%), Gaps = 24/491 (4%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + QL  +  +  +  R+++      +++ + D+A   F +ML+ G           L+  
Sbjct: 168 VEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYG-----------LLIS 216

Query: 152 IKSCSFDKGWLFFSENRCKVELDVY-------------SFGILIKGCCEAGDLNKAFEVL 198
           + SC+     L    +  K+ L V+             S+ I+    C+ G + +A ++L
Sbjct: 217 VDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL 276

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            Q+E  G  P+V+ Y+++I+G C+ G+++R   L  ++   GL    +TY  +I  L K 
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 336

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G   +      +M   G++P    Y  LI  +C  G VS  ++LFDEM+ R+++ + +TY
Sbjct: 337 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 396

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             +ICGLC+  RV EA++L  +M    + P+ +TY  LIDG+C  G+  +AF L NQ+  
Sbjct: 397 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 456

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P++VTY  L     K G    A++L+ EM  +G+  +  TY  L++   ++ ++++
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 516

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++   M+ +GF PD  TY  L+   C    M  A +L   M + +L+P  V +N+++ 
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+C  G      +LL  M EKG++PN  +Y+S I   C          +   M   G+ P
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636

Query: 559 SVSLYNILYRA 569
             + YNIL + 
Sbjct: 637 DGNTYNILIKG 647



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 208/391 (53%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y++  +I   C+ G + +A  VL ++   G +P+ VIYT+LIDG CK G++  A  LF +
Sbjct: 324 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 383

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +  +     TYT +ICGL + G   +  + + +M    + P   TY  LI  YC EGK
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E F L ++M    +  N+VTY  L  GLCK   V  A  LL +M   G+  N+ TYN 
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L++G C AG  D+A +L   ++  G  P  VTY  L+ A+ K+     A +L+R+M +R 
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ VT+ +L++ F  S  +E   ++   M + G  P+  TY  LI   C++ NM+  +
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +++  M    + P+   YN++I G+CK  N   A  L  +M  KG    ++SY++ I   
Sbjct: 624 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  K+ EA  L  QM + GL     +YNI 
Sbjct: 684 YKRKKFLEARELFEQMRREGLVADREIYNIF 714



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 216/433 (49%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + +     + L    +M   G++P   T+N +++ + K+    +      E  
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  D   +  LI G C+ G+++ A+ + +++++   SP+ + YT++I G C+ G + 
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++    L   + TYT LI G  K G  K+ F  + +M   G++P++ TY  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V    +L  EM  + +  N+ TYN+L+ GLCK   + +A +L+  M++AG  
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TY  L+D +C + E  +A  L  Q+      P+VVT+NVL+  F  +G  +    L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++ M E+GI P+  TY  LI  +   ++M    E+Y  M   G  PD  TY +LI G C 
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             NMKEA  L   M           YN +I G+ K      A  L  +M  +GLV +   
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710

Query: 528 YSSTIGVLCQDGK 540
           Y+    +   +GK
Sbjct: 711 YNIFADINYDEGK 723



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 205/431 (47%), Gaps = 5/431 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T    Y  +I    K+    +A     +M+  G+ P    + +L+    K  +    
Sbjct: 322 NPYT----YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           +  F E  + K+  D  ++  +I G C+ G + +A ++ +++      P+ V YT+LIDG
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G ++ A  L  ++ ++GL     TYT L  GL K G      E   +M   G+  +
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +YTYN L++  C  G + +  KL  +M       + VTY TL+   CK   +  A  LL 
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           QM    + P V+T+N L++GFC +G  +   +L   +   G  P+  TYN LI+ +    
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 617

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
           N +  +++ R M  +G+ P   TY ILI    ++ +M++A+ ++  M   GF+  V +Y 
Sbjct: 618 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 677

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI G   +    EA +LF  M    L  +  +YN+       EG     L L  E  EK
Sbjct: 678 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 737

Query: 520 GLVPNIASYSS 530
            LV +I + ++
Sbjct: 738 CLVGDIQTKNT 748


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 238/471 (50%), Gaps = 24/471 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K++L D+A   F QM+D+GV+P ++T+N L+           G+L   + +
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLI----------HGYLSIGKWK 259

Query: 169 CKVEL-----------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             V++           D Y++G L+   C    L++    L+ + E G SP+  I+    
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFF 316

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
               K G I++A  +F K+ + GL      Y  LI  L K G   D    + +M   GV+
Sbjct: 317 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 376

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++  +N L++  C   K     +L  EM  + +  N V +NTLIC LC   RV E  RL
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           +D M+  G+ P+  +Y  LI G+C AG TD+A ++F+ + S G SP+ VTYN L+  +  
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A     A  L REM  +G+TP  VTY  ++    ++    +A E+Y  M  SG   D+YT
Sbjct: 497 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y ++++GLC    + EA K+F S+    L+ N + + +MI    K G    A+ L   + 
Sbjct: 557 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 616

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
             GLVPN+ +Y      L ++G   E + L + M K G  P+  + N L R
Sbjct: 617 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 667



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 199/396 (50%), Gaps = 6/396 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFS--PNVVIYTSLIDGCCKNGDIERAK 230
           D  S+ IL+KG C      +A E+L  +  + G S  PNVV YT++IDG CK    +RA+
Sbjct: 168 DTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAE 227

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F+++ + G+     TY  LI G    G  K+  +  EKM   G+ P  YTY  L++  
Sbjct: 228 GVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYL 287

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C    +SE     D M    ++ +   +N       K   + +A  + ++M+  G+SPNV
Sbjct: 288 C---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 344

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + Y  LID  C  G  D A   FNQ+ + G +P++V +N L+         + A +LV E
Sbjct: 345 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 404

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++GI P+ V +  LI +      + +   +  LM+  G  PD ++Y  LI G C+ G 
Sbjct: 405 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGR 464

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             EA K+F+ M    L P +V YN ++ GYC       A  L  EM  KG+ P + +Y++
Sbjct: 465 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 524

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  L Q  ++ EA+ L   M+  G K  +  YNI+
Sbjct: 525 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 206/421 (48%), Gaps = 1/421 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCC 186
           +   M+++G+ P  + FN       K    DK    F++ R   +  +V ++G LI   C
Sbjct: 296 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 355

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G ++ A    NQ+   G +PN+V++ SL+ G C     ERA+ L  ++ + G+     
Sbjct: 356 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 415

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +  LIC L   G   +G    + M+  GV P  ++Y  LI  YC  G+  E  K+FD M
Sbjct: 416 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               ++   VTYNTL+ G C   R+ +A  L  +M   G++P V+TYN ++ G       
Sbjct: 476 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 535

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  L+  + ++G    + TYN+++    K+     A  + + +  +G+  + +T+TI+
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I + ++    E A ++++ +  +G  P+V TY ++   L  +G+++E   LF++M +   
Sbjct: 596 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 655

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN  + N ++      G+  RA   L +++E+      ++ S  I +   D     A+ 
Sbjct: 656 APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKS 715

Query: 547 L 547
           L
Sbjct: 716 L 716



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 191/378 (50%), Gaps = 1/378 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++     A+ K  + D+A+  F++M   G+ P    + +L+  + K    D   + F++
Sbjct: 310 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 369

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + V  ++  F  L+ G C      +A E++ ++ + G  PN V + +LI   C  G 
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +   + L   +  +G+     +YT LI G    G   +  + ++ M   G+SP+  TYN 
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H YC+  ++ + + LF EM  + V   VVTYNT++ GL +  R  EA+ L   M  +G
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              ++ TYN +++G C +   D+AF++F  L S G   +++T+ ++I A  K G  + A 
Sbjct: 550 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           DL   +   G+ P+ VTY ++ ++ +    +E+   ++S M+K+G +P+      L+  L
Sbjct: 610 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 669

Query: 466 CMKGNMKEASKLFNSMWE 483
             +G++  A    + + E
Sbjct: 670 LHRGDISRAGAYLSKLDE 687



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 153/295 (51%), Gaps = 7/295 (2%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA- 334
           V+P+  TY+ LI   C  G++   F  F  +       N +  N L+ GLC   RV EA 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQS--PSVVTYNVL 391
           + LL +M   G +P+ ++Y+ L+ GFC+    ++A  L   + ++ G+S  P+VVTY  +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I    KA     A  + ++M + G+ P+  TY  LI  ++     ++  +M   M   G 
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD YTYG L++ LC    + E     + M E  L P+  ++N+    Y K G   +A+ 
Sbjct: 274 KPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +M + GL PN+ +Y + I  LC+ G+  +AEV  NQM+  G+ P++ ++N L
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 385



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 60/239 (25%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A +LF++L  + +  SVV +N ++ A S+A  +           E  ++        L
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVS--------L 82

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
            +  VR   ++ A             P+  TY +LI  LC  G +K +   F  + +T  
Sbjct: 83  FNRMVRECSIKVA-------------PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGW 129

Query: 487 EPNDVVYN------------------------------------MMIFGYCKEGNSYRAL 510
             ND+V N                                    +++ G+C E  +  AL
Sbjct: 130 RVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEAL 189

Query: 511 RLLGEM-NEKG--LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LL  M N+ G    PN+ +Y++ I  LC+   +  AE +  QM+  G+KP+   YN L
Sbjct: 190 ELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCL 248


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 243/461 (52%), Gaps = 2/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +++ I+  + +  +   AL  F  M   G  P   + N LL  +++        L +   
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR  +  DV++  I++   C+ G +N A + + +++ +GF  NVV Y SLIDGC   GD+
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNC 285
           ERA+M+ + +GE G++  + T T+LI G  +    ++  +   +M+ + G+    Y Y  
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC   K+ +  +L DEM +  +  N+   N LI G CK  +V EAERLL +M    
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P   +Y+ L+DGFC  G   KA  ++N++   G   +VVT+N L++   + G  + A 
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M +RG+TP EV+Y  L+D   +  +  +A  +++ +   G+    Y +  +I+G 
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    M EA + FN M E   EP+ V Y  +I GYCK GN   A ++  +M ++ ++P+I
Sbjct: 510 CKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSI 569

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             Y+S IG L +  K  E   LL++M   GL P+V  Y  L
Sbjct: 570 ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 236/465 (50%), Gaps = 36/465 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           + AL  +H ML  GV P   ++ +LL  + K   F +    +++   +      Y+F  +
Sbjct: 446 EDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+   + +A E  N+++E+GF P+ V Y +LIDG CK G++E A  +  K+ +  +
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + +   Y  LI GLFK+   ++  +   +M L G+SP++ TY  LI  +C+EG++ + F 
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-------------------- 341
            + +M  +  A NV+  + ++  L +  R+ EA  LL +M                    
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 342 ------KMAGIS---------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
                 K+A            PN + YN  I G C +G+ D A ++F+ L   G SP   
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  LI  +S AGN   A  L  EM +RG+ P+ +TY  LI+   +S ++++A +++  +
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G +P+V +Y +LI G C  GN +EA  L N M +  + P+ + Y+ +I+G+CK+G+ 
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +A  LL EM E     NIA +   +    + G+  +   L N M
Sbjct: 866 GKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 241/492 (48%), Gaps = 36/492 (7%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           ++I+ + K+    +A     +M+D  + P S ++++L+    +     K    ++E  R 
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV 423

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            ++ +V +   L+KG C  G    A  V + + + G +P+ V Y +L+D   K G+  RA
Sbjct: 424 GIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRA 483

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L+  I   G   + + +  +I G  K     +  E + +M+  G  P   TY  LI  
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  G V E FK+ ++M    +  ++  YN+LI GL K  + +E   LL +M + G+SPN
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG---------- 399
           V+TY  LI G+CD G  DKAF  +  +   G +P+V+  + ++ +  + G          
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 663

Query: 400 -------------------------NSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
                                    +S+  +D + E  +    P+ V Y I I    +S 
Sbjct: 664 KMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSG 723

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            ++ A +++S +   GFSPD +TY  LIHG    GN+ +A  L + M +  L PN + YN
Sbjct: 724 KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN 783

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G CK GN  RA +L  +++ KGL PN+ SY+  I   C++G   EA  L N+MLK 
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843

Query: 555 GLKPSVSLYNIL 566
           G+ PS+  Y+ L
Sbjct: 844 GISPSLITYSAL 855



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 239/565 (42%), Gaps = 107/565 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+ID  +     ++A      M + G+     T   L+    + C  ++      E  
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R + + LD Y++G+LI G C    ++ A  + +++  +G   N+ I  +LI+G CKNG +
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ L  ++ +  L    ++Y+ L+ G  + GL       Y +M   G+  ++ T+N L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTY---------------------------- 318
           +   C  G   +   ++  M  R V  + V+Y                            
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495

Query: 319 -------NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                  NT+I G CK  ++ EAE   ++MK  G  P+ +TY  LIDG+C  G  ++AF+
Sbjct: 496 GRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFK 555

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +  +++     PS+  YN LI    K+  ++   DL+ EM  +G++P+ VTY  LI  + 
Sbjct: 556 VKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWC 615

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM---------- 481
               ++KAF  Y  M + GF+P+V     ++  L   G + EA+ L   M          
Sbjct: 616 DEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675

Query: 482 WETKLE-------------------------PNDVVYNMMIFGYCKE------------- 503
           +  +L                          PN VVYN+ I G CK              
Sbjct: 676 YFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSL 735

Query: 504 ----------------------GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                                 GN   A  L  EM ++GL PNI +Y++ I  LC+ G  
Sbjct: 736 LLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNL 795

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A+ L +++   GL P+V  YNIL
Sbjct: 796 DRAQKLFDKLHLKGLAPNVISYNIL 820



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 189/375 (50%), Gaps = 36/375 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K    ++A     +M    + P    +NSL+  + KS    +     SE  
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  +V ++G LI G C+ G L+KAF     + E GF+PNV+I + ++    + G I+
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 228 RAKMLFRKIGELGL-----------------------------------VATQHTYTVLI 252
            A ML +K+  L +                                   +     Y + I
Sbjct: 657 EANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAI 716

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K+G   D  + +  + L G SP  +TY  LIH Y   G V++ F L DEM  R +A
Sbjct: 717 AGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLA 776

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N++TYN LI GLCK   +  A++L D++ + G++PNVI+YN LIDG+C  G T +A  L
Sbjct: 777 PNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDL 836

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N++   G SPS++TY+ LI  F K G+   A++L+ EM E     +   +  L++  V+
Sbjct: 837 RNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVK 896

Query: 433 SDDMEKAFEMYSLMQ 447
             +++K  +++++M 
Sbjct: 897 CGEVKKIAKLHNMMH 911



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 194/407 (47%), Gaps = 38/407 (9%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           E++   E+  FSP V  +  ++   C+ G I+ A  +F  +G+LG V +  +   L+  L
Sbjct: 136 ELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            + G   +    Y+ +   G+ P ++T + +++ YC +G V+       EM +     NV
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253

Query: 316 VTYNTLI--C---------------------------------GLCKEMRVQEAERLLDQ 340
           VTYN+LI  C                                 G C++ +++EAE++L +
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313

Query: 341 MKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           M+ + G+  +   Y  LIDG+C   + D A RL +++ + G   ++   N LI  + K G
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  L+  M +  + P   +Y+ L+D F R   + KA  +Y+ M + G   +V T+ 
Sbjct: 374 QVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHN 433

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ GLC  G  ++A  +++ M +  + P++V Y  ++    K G  +RAL L  ++  +
Sbjct: 434 SLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G   +  ++++ I   C+  K  EAE   N+M +LG +P    Y  L
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 23/144 (15%)

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM-------------W--------ETK 485
           ++S F P+V ++  L+H L       E     N +             W        + K
Sbjct: 86  KQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFK 145

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P   V++M++  YC++G    AL +   M + G VP++ S +  +  L + G+   A 
Sbjct: 146 FSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
           ++ + + +LG+ P V   +I+  A
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNA 227


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 256/510 (50%), Gaps = 15/510 (2%)

Query: 58  MSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYE---SIID 114
           ++S +  A   + L   +  I SS F       H T+L+ + +  +  ++ +E    ++ 
Sbjct: 83  VASLASDAGSMVALSFFNWAIASSKFR------HFTRLYIACAASLISNKNFEKAHEVMQ 136

Query: 115 AHLKSRLS----DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
             +KS        +A+    +M + G+ P + T N ++  V +    +     F E   +
Sbjct: 137 CMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCAR 196

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V+ +  S+ +++ G C+ G++ ++   L  + E GF  +    + ++   C+ G + RA
Sbjct: 197 GVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRA 256

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
              FR+  E+GL      +T +I GL K G  K  FE  E+M   G  P++YT+  LI  
Sbjct: 257 LWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDG 316

Query: 290 YCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            C +G   + F+LF ++ R      NV+TY  +I G C++ ++  AE LL +MK  G++P
Sbjct: 317 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAP 376

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N  TY  LIDG C AG  ++A+ L N +   G SP+V TYN ++    K G  + A  ++
Sbjct: 377 NTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVL 436

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           +     G+   +VTYTILI    +  ++++A  +++ M KSG  PD+++Y  LI   C +
Sbjct: 437 KSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE 496

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             MKE+   F       L P +  Y  MI GYC+EGN   AL+    M++ G   +  +Y
Sbjct: 497 KRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITY 556

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            + I  LC+  K  EA  L + M++ GL P
Sbjct: 557 GALISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 212/388 (54%), Gaps = 7/388 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++K   E G + +A E++ ++   G +P+      ++    + G +E A+ LF ++   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG- 299
           +     +Y V++ G  K G   +   +   M   G      T + ++ E+C +G V+   
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 300 --FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F+ F EM  R    N++ +  +I GLCK   V++A  +L++M   G  PNV T+  LI
Sbjct: 258 WYFRRFCEMGLRP---NLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALI 314

Query: 358 DGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           DG C  G T+KAFRLF +L +S    P+V+TY  +I  + +      A  L+  M+E+G+
Sbjct: 315 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGL 374

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+  TYT LID   ++ + E+A+E+ ++M + GFSP+V TY  ++ GLC KG ++EA K
Sbjct: 375 APNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYK 434

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +  S +   L+ + V Y ++I  +CK+    +AL L  +M + G+ P+I SY++ I V C
Sbjct: 435 VLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFC 494

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           ++ +  E+E+   + ++ GL P+   Y 
Sbjct: 495 REKRMKESEMFFEEAVRFGLVPTNKTYT 522



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 271/588 (46%), Gaps = 63/588 (10%)

Query: 10  QALTLNLISRMAKLPPLKAFSLFNWA--SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQ 67
           QA+T+ + S  +    + A S FNWA  S +    T   I+    L+ +K    +H   Q
Sbjct: 78  QAVTI-VASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQ 136

Query: 68  TLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
            ++      GR+       +  +  + ++      P TK+  +  ++    +  L + A 
Sbjct: 137 CMVKSFAEIGRV-------KEAIEMVIEMHNQGLAPSTKTLNW--VVKIVTEMGLVEYAE 187

Query: 127 FYFHQMLDSGVRPRSNTFNSLLI----------------------FVIKSCSF------- 157
             F +M   GV+P   ++  +++                      FV+ + +        
Sbjct: 188 NLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREF 247

Query: 158 -DKGW----LFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +KG+    L++    C++ L  ++ +F  +I+G C+ G + +AFE+L ++   G+ PNV
Sbjct: 248 CEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNV 307

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH------TYTVLICGLFKNGLQKDG 264
             +T+LIDG CK G  E+A  LF     L LV +++      TYT +I G  ++      
Sbjct: 308 YTHTALIDGLCKKGWTEKAFRLF-----LKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                +M+  G++P+  TY  LI  +C  G     ++L + M     + NV TYN ++ G
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK+ RVQEA ++L      G+  + +TY  LI   C   E  +A  LFN++  +G  P 
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           + +Y  LI  F +    K +     E    G+ P+  TYT +I  + R  ++  A + + 
Sbjct: 483 IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G + D  TYG LI GLC +  + EA  L+++M E  L P +V    + + YCK  
Sbjct: 543 RMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKID 602

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +   A+ +L  + +K  V  +   ++ +  LC + K   A +  +++L
Sbjct: 603 DGCSAMVVLERLEKKLWVRTV---NTLVRKLCSERKVGMAALFFHKLL 647



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 189/404 (46%), Gaps = 12/404 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---- 164
           +  +I+   K     QA     +M+  G +P   T  +L+  + K    +K +  F    
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334

Query: 165 -SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            SEN    + +V ++  +I G C    +N+A  +L++++E G +PN   YT+LIDG CK 
Sbjct: 335 RSENH---KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKA 391

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+ ERA  L   + E G      TY  ++ GL K G  ++ ++  +    NG+     TY
Sbjct: 392 GNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTY 451

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI E+C + ++ +   LF++M    +  ++ +Y TLI   C+E R++E+E   ++   
Sbjct: 452 TILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVR 511

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ P   TY  +I G+C  G    A + F+++  +G +   +TY  LI    K      
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDE 571

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   M E+G+TP EVT   L   + + DD   A  +   ++K  +   V T   L+ 
Sbjct: 572 ARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLW---VRTVNTLVR 628

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            LC +  +  A+  F+ + +     N V     +   C E N Y
Sbjct: 629 KLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTA-CYESNKY 671



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 89/176 (50%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++++F++ G  K A ++V EM  +G+ PS  T   ++        +E A  ++  M   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+  +Y V++ G C  GN+ E+ +    M E     ++   ++++  +C++G   RAL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                  E GL PN+ +++  I  LC+ G   +A  +L +M+  G KP+V  +  L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTAL 313


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 233/444 (52%), Gaps = 7/444 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M+ SG RP + TFNSL++   ++   D     F +   +    DV S+  LI+G CEAG 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++A E+  ++++    P++ +Y +L+ G C     E   ++ R++ ELG   +   Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++    +    K+  E  ++M   G++P + T   +I+ YC EG++S+  ++ + M+ R 
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NV TYN L+ G C E +V +A  LL++M+  G++P+ +TYN LI G C  G  + AF
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           RL   ++ +G      TYN LI A  K G +  A  L   +E RGI P+ VT+  LI+  
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC-MKGNMKEASKLFNSMWETKLEPN 489
            +S   + A++    M  +G +PD YTY   I  LC MKG+ +E       M +  ++P+
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS-QEGLSFIGEMLQKDVKPS 355

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y ++I    KE N     R  GEM   G  P++ +Y++++   C +G+  EAE +L 
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415

Query: 550 QMLKLGLKPSVSLYNILYRAKNNI 573
           +M K G+      YN L     +I
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASI 439



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 21/463 (4%)

Query: 111 SIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           ++I+A+ K  R+SD AL     M   G +P   T+N+L+          K     ++ R 
Sbjct: 151 AVINAYCKEGRMSD-ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C V  D  ++ +LI+G C  G +  AF +L  +E  G   +   Y +LI+  CK+G  ++
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  +   G+     T+  LI GL K+G     ++F EKM   G +P  YTY+  I 
Sbjct: 270 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 329

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C      EG     EM  ++V  + V Y  +I  L KE       R   +M  +G +P
Sbjct: 330 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 389

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TY   +  +C  G  ++A  +  ++  NG +   + YN L+   +  G +  A  ++
Sbjct: 390 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 449

Query: 409 REMEERGITPSEVTYTILIDSFVR-----------------SDDMEKAFEMYSLMQKSGF 451
           ++M      P++ TY IL+   VR                 + ++   F ++ +M+K+ F
Sbjct: 450 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 509

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+  TY  ++ G    G  +EA+ L + M E  +  N+ +Y  ++  +CK      A  
Sbjct: 510 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 569

Query: 512 LLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAEVLLNQMLK 553
           L+  M + G +P + SY   + G++C+       E+ +N   K
Sbjct: 570 LVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWK 612



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 216/479 (45%), Gaps = 18/479 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y +++D   + R + +A     +M + G+ P   T  +++    K            
Sbjct: 111 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 170

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             + +  + +V+++  L++G C  G ++KA  +LN++   G +P+ V Y  LI G C +G
Sbjct: 171 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 230

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  L R +   GL+A Q+TY  LI  L K+G        ++ ++  G+ P+  T+N
Sbjct: 231 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 290

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+  C  GK    +K  ++M       +  TY++ I  LCK    QE    + +M   
Sbjct: 291 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P+ + Y  +I             R + ++ S+G +P VVTY   +RA+   G    A
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH- 463
            +++ EM + G+T   + Y  L+D        + A  +   M      P+ +TY +L+  
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 470

Query: 464 ----------------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
                           G+     + +   LF+ M + +  PN   Y+ ++ G+ ++G + 
Sbjct: 471 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 530

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  L+  M E  +  N   Y++ +   C+  ++ +A VL+  M++ G  P +  Y  L
Sbjct: 531 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 24/359 (6%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++  +   P T +  Y S I+   K + S + L +  +ML   V+P +  +  ++  +
Sbjct: 309 LEKMVSAGCTPDTYT--YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 366

Query: 152 IKSCSFD---KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
           +K  ++    + W     + C    DV ++   ++  C  G LN+A  VL ++ + G + 
Sbjct: 367 LKERNYGLVARTWGEMVSSGCNP--DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---------------- 252
           + + Y +L+DG    G  + A  + +++  +  V  Q TY +L+                
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484

Query: 253 -CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
             G++K     D F  ++ M+ N   P+  TY+ ++  +  +G+  E   L   M+   +
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 544

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           + N   Y  L+   CK  R  +A  L+  M   G  P +++Y  L+ G    G+TDKA  
Sbjct: 545 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKE 604

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +F   +    SP  + + V+I    K G+S ++ +++  +E     PS  TY +L +  
Sbjct: 605 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 18/269 (6%)

Query: 95  LFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           L   S N VT   + Y +++D H     +D A+    QM      P   T+  LL  ++ 
Sbjct: 414 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV- 472

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
                         R ++  DV    +   G  +A +L   F + + +++  F PN   Y
Sbjct: 473 --------------RMRLVEDV--LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 516

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           +S+++G  ++G  E A  L   + E  +   +  YT L+    K+    D +     M  
Sbjct: 517 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 576

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G  P L +Y  L+     EG+  +  ++F   R ++ + + + +  +I GL K+     
Sbjct: 577 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 636

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCD 362
           +  ++  ++     P+  TY  L +   D
Sbjct: 637 SREMIIMLERMNCRPSHQTYAMLTEELPD 665


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/482 (32%), Positives = 229/482 (47%), Gaps = 42/482 (8%)

Query: 119 SRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYS 177
           SRL  D+A+  F  + D  V     ++N LL  +  +   +     F E       DV +
Sbjct: 243 SRLPLDEAIELFQGLPDKNV----CSYNILLKVLCGAGRVEDARQLFDE--MASPPDVVT 296

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI-------------------- 217
           +GILI G C  G+L  A ++L+ +   G  PN  +YTS++                    
Sbjct: 297 YGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMV 356

Query: 218 ---------------DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
                           G C  GD+  A+  F ++   GL     TYT LI GL + G  K
Sbjct: 357 HHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELK 416

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +  +  ++M    +     TY  L+  YC  GK++E F++ + M  R VA NVVTY  L 
Sbjct: 417 EAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALS 476

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCK+  VQ A  LL +M   G+  N  TYN LI+G C AG  D+A R    + + G  
Sbjct: 477 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P V TY  LI A  K+G    A DL++EM + GI P+ VTY +L++ F  S  +E   ++
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M +    P+  TY  L+   C+  NMK  ++++  M    +EPN+  YN++I G+CK
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
             +   A     EM EKG     +SYS+ I +L +  K+ EA  L + M K G      +
Sbjct: 657 ARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDV 716

Query: 563 YN 564
           YN
Sbjct: 717 YN 718



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 201/396 (50%), Gaps = 3/396 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V S+ IL+K  C AG +  A ++    +EM   P+VV Y  LI G C  G++E A  L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLF---DEMASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G+      YT ++  L   G   D     E M  + V      Y  ++  +CN+
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +    + FDEM+ + +A + VTY TLI GLC+   ++EAE++L +M    +  + +TY
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+DG+C  G+  +AF++ N +   G +P+VVTY  L     K G+ + A++L+ EM  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+  +  TY  LI+   ++  +++A    + M  +G  PDVYTY  LI  LC  G +  
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  L   M +  ++P  V YN+++ G+C  G      +LL  M EK + PN  +Y+S + 
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C          +   M    ++P+ + YNIL + 
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 198/446 (44%), Gaps = 36/446 (8%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           + A+     M+  GV P +  + S++  +              +    KV LD   +  +
Sbjct: 311 ENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTV 370

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G C  GDL  A    ++++  G + + V YT+LI+G C+ G+++ A+ + +++    L
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              + TYTVL+ G  K G   + F+ +  M   GV+P++ TY  L    C +G V    +
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV----------- 350
           L  EM ++ +  N  TYN+LI GLCK   + +A R +  M  AG+ P+V           
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550

Query: 351 ------------------------ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
                                   +TYN L++GFC +G  +   +L   +      P+  
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L++ +    N K  +++ + M  R + P+E TY ILI    ++  M++A   ++ M
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + GF     +Y  LI  L  K    EA KLF+ M +        VYN  I     E N 
Sbjct: 671 IEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNL 730

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTI 532
              L L  E+ E  +V + A     +
Sbjct: 731 EATLALCDELVEASIVKSKAEMDQDV 756


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 258/525 (49%), Gaps = 15/525 (2%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A S FN   R   +  P S     RLL S   +  H+   +L  ++ S  I    +T  
Sbjct: 53  EALSTFN---RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109

Query: 87  SL---LCHLTQLFPSSSNPVTKSRL--------YESIIDAHLKSRLSDQALFYFHQMLDS 135
            +   LCHL ++  + S      +L        + ++I          +AL  F +M+  
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G +P   T+ +L+  + K  +      L  S  +   + +V  F  LI   C+   + +A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           F + +++   G SPN+V Y SLI G CK  + +    L  ++ +  ++    T   ++  
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K G+  +  +  + M   GV P++ TYN L+  +C   +V    K+FD M H++   N
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V++YNTLI G CK   V +A  L ++M    ++PN +TYN LI G C  G    A  LF+
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ + GQ P +VTY  L     K  +   A  L++ +E     P    YT ++D   R+ 
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           ++E A +++S +   G  P+V+TY ++IHGLC +G + EASKLF+ M +    PND  YN
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           ++  G+ +   + R + LL EM  +G   ++++ +  +G+L  DG
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 230/488 (47%), Gaps = 38/488 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS---------------------------- 154
           D+AL  F++ML     P +  FN LL  + K+                            
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 155 ----CSFDKGWLFFSENRCKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
               C  ++    FS     ++L    D  +F  LI+G C  G + +A  + +++   GF
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            PNVV Y +LI+G CK G+   A  L R + +         ++ LI  L K+    + F 
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            + +M   G+SP++ TYN LIH  C   +      L +EM   ++  +V T NT++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           KE  V EA  ++D M   G+ PNV+TYN L+DG C   E D A ++F+ +       +V+
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           +YN LI  + K  +   A  L  EM  + +TP+ VTY  LI        ++ A  ++  M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  PD+ TY  L   LC   ++ +A  L  ++  +  +P+  +Y  ++ G C+ G  
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L   ++ KGL PN+ +Y+  I  LC+ G   EA  L ++M K G  P+   YN++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 567 YRA--KNN 572
            R   +NN
Sbjct: 532 TRGFLRNN 539


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 239/471 (50%), Gaps = 45/471 (9%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T+N LL+ + +    DK    F E   K  + D ++F IL++G C +  L KA ++L ++
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           +EMG  P+  IY +LI G  K  D  +A     ++ +   + T  TYT ++ GL K    
Sbjct: 69  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +D  +  ++M+  G SP++YTYN ++   C E K+ E  K+ +EM  R    +VVTYN+ 
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188

Query: 322 ICGLCKEMRVQEAE--------------------------------RLLDQMKMAGISPN 349
           I GLCK  RV EA                                 R+LD M   G +P+
Sbjct: 189 IKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPD 248

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY+ LIDGFC  GE ++A  L + +   G  P++V YN L+ A  + G+   A D++ 
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 308

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP----------DVYTYG 459
           EME RG TP  V+Y   ID   +++ ++KA  ++  M + G +P          D+  Y 
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYT 368

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKL-EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
           VL+ GLC  G   EA  LF+ + + K+ EP+   YN+M+  +CK     +AL++  +M E
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           K    N+ +++  +  LC D +  +AE +L  M+  G  P    Y  L  A
Sbjct: 429 KNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 185/363 (50%), Gaps = 3/363 (0%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           MG+  NV  Y  L+    +    ++A  +F+++ +        T+ +L+ GL ++   + 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             +   +M+  G  P    YN LI  Y       + FK   EM        VVTY  ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  R ++A +LLD+M+  G SPN+ TYN +++G C+  + D+A ++  ++   G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            VVTYN  I+   K      A   +  M    +TP  V+YT +I+   +S D++ A  M 
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G +PDV TY  LI G C  G ++ A  L +SM +    PN V YN ++    + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G+  +A  +L EM  +G  P++ SY++ I  LC+  +  +A+ + ++M++ G  P+ S Y
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 564 NIL 566
           ++L
Sbjct: 358 SML 360



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 3/295 (1%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G   +++TYN L+ +   E +  +   +F EM  +    +  T+  L+ GLC+  ++++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +LL +MK  G  P+   YN LI G+  A +  +AF+   ++  N   P+VVTY  ++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KA  ++ A  L+ EM ++G +P+  TY ++++       +++A +M   M   G+ PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY   I GLC    + EA K    M  T   P+ V Y  +I G CK G+   A R+L 
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M+ +G  P++ +YSS I   C+ G+   A  LL+ MLKLG +P++  YN L  A
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 293



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 173/398 (43%), Gaps = 47/398 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I++   + R  D+A     +M   G  P   T+NS +  + K    D+   F +  R
Sbjct: 150 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA--R 207

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             V  DV S+  +I G C++GDL+ A  +L+ +   G +P+VV Y+SLIDG CK G++ER
Sbjct: 208 MPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVER 267

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L   + +LG       Y  L+  L + G      +   +M+  G +P + +YN  I 
Sbjct: 268 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 327

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC----------GLCKEMRVQEA---- 334
             C   +V +   +FD M  R    N  +Y+ LI           GLCK  R  EA    
Sbjct: 328 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387

Query: 335 ERLLDQ-----------------MKMAGISP--------------NVITYNKLIDGFCDA 363
            ++LD+                  K   I                NV+T+N L+ G C  
Sbjct: 388 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVD 447

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
                A  +   +   G  P  VTY  L+ A  K G S  A +L  E  + G  P  VTY
Sbjct: 448 DRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 507

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + LI   V  +  E+A+ +++ + +  + PD  T G+L
Sbjct: 508 SALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 163/338 (48%), Gaps = 14/338 (4%)

Query: 102 PVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           PVT   + Y ++I+   KS   D A      M + G  P   T++SL+    K    ++ 
Sbjct: 209 PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERA 268

Query: 161 W-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
             L  S  +     ++ ++  L+      G + KA ++L ++E  GF+P+VV Y + IDG
Sbjct: 269 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328

Query: 220 CCKNGDIERAKMLFRKIGELG----------LVATQHTYTVLICGLFKNGLQKDGFEFYE 269
            CK   +++AK +F ++ E G          L+     YTVL+ GL K G   +    + 
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS 388

Query: 270 KMQLNGV-SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           K+    +  P ++ YN ++  +C   ++ +  ++  +M  +   CNVVT+N L+ GLC +
Sbjct: 389 KVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-CCNVVTWNILVHGLCVD 447

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ +AE +L  M   G  P+ +TY  L+D  C  G++  A  LF +    G  P VVTY
Sbjct: 448 DRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 507

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           + LI        ++ A  L  ++ ER   P + T  +L
Sbjct: 508 SALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 175/612 (28%), Positives = 282/612 (46%), Gaps = 76/612 (12%)

Query: 25  PLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSH-------------------- 63
           P  A + F W A R G +HT  S + +L LL  + +   +                    
Sbjct: 70  PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129

Query: 64  AAAQTLILKIISGRITSS----SFTPRSLLCH---------LTQLFPSSSNPVTKSRLYE 110
           A A   I +  S R+  S    +F  RSL             +QL      P T +  Y 
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVT--YN 187

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRC 169
           ++I ++ K      A   F  +L+ G+ P + T N+L++   ++    K  WLF      
Sbjct: 188 TMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 247

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             + + YS+ ILI+G CEA  + +A  +   ++  G SPNV  +T LI G CK+G +  A
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           ++LF  + + G+V +  TY  +I G  K G   D  +  E M+ NG  P  +TYN LI+ 
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC----------------------- 326
            C++ K  E  +L +          VVT+  LI G C                       
Sbjct: 368 LCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426

Query: 327 ------------KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                       K+ R++EA+ LL+++   G+ PNVITY  +IDG+C +G+ D A  +  
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            ++ +G  P+  TYN L+    K      A  L+ +M++ GI P+ +TYT L+       
Sbjct: 487 MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D + AF ++ +M+++G  PD + Y VL   LC  G  +EA   ++ +    +    V Y 
Sbjct: 547 DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYT 603

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G+ K GN+  A  L+  M ++G  P+  +YS  +  LC+  +  EA  +L+QM   
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 555 GLKPSVSLYNIL 566
           G+K ++  Y IL
Sbjct: 664 GIKCTIFAYTIL 675



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 221/509 (43%), Gaps = 88/509 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SIID + KS   D AL     M   G +P + T+NSL+  ++K    DK         
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK----DK--------- 511

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                                 L+KA  +L ++++ G  PNV+ YT+L+ G C   D + 
Sbjct: 512 ---------------------KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  + + GL   +H Y VL   L K G  ++ + F  +    GV+ +   Y  LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLID 607

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G       L + M       +  TY+ L+  LCK+ R+ EA  +LDQM + GI  
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +  Y  LID     G+ D A R++N++ S+G  PS  TY V I ++ K G  + A DL+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 409 REMEERGITPSEVTYTILID---------------------------------------- 428
            +ME  G+ P  VTY ILID                                        
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787

Query: 429 --SFVRSDD---------MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
             ++VRS D         ++  +++   M K G +P V TY  LI G C  G ++EA  L
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            + M    L PN+ +Y ++I   C      +AL  +  M+E G  P + SY   +  LC 
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G + + + L   +L+LG       + IL
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 225/506 (44%), Gaps = 63/506 (12%)

Query: 121 LSDQALFYFHQMLDSGVR----PRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVEL 173
           L DQ      ++L++ V+    P   TF +L+     +  FD      ++   ++CK++L
Sbjct: 368 LCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            V  FG LI    +   L +A E+LN++   G  PNV+ YTS+IDG CK+G ++ A  + 
Sbjct: 428 QV--FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + +   G      TY  L+ GL K+           KMQ +G+ P++ TY  L+   C+E
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                 F+LF+ M    +  +   Y  L   LCK  R +EA   + +    G++   + Y
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYY 602

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDGF  AG TD A  L  ++   G +P   TY+VL+ A  K      A  ++ +M  
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI  +   YTILID  +R    + A  MY+ M  SG  P   TY V I+  C +G +++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL----------------------- 510
           A  L   M    + P+ V YN++I G    G   RA                        
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 511 ----------------------------RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                                       +LL  M + GL P + +YSS I   C+ G+  
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYR 568
           EA +LL+ M   GL P+  +Y +L +
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 223/497 (44%), Gaps = 38/497 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---F 163
           R +  +I    KS     A   F  M  +GV P   T+N++++   K    +        
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             +N C    D +++  LI G C+     +A E+LN   + GF+P VV +T+LI+G C  
Sbjct: 349 MEKNGCHP--DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + A  +  K+           +  LI  L K    K+  E   ++  NG+ P++ TY
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I  YC  GKV    ++   M       N  TYN+L+ GL K+ ++ +A  LL +M+ 
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP-------------------- 383
            GI PNVITY  L+ G CD  + D AFRLF  ++ NG  P                    
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 384 ------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
                       + V Y  LI  FSKAGN+  A+ L+  M + G TP   TY++L+ +  
Sbjct: 586 AYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   + +A  +   M   G    ++ Y +LI  +  +G    A +++N M  +  +P+  
Sbjct: 646 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y + I  YCKEG    A  L+ +M  +G+ P++ +Y+  I      G    A   L +M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 552 LKLGLKPSVSLYNILYR 568
           +    +P+   Y +L +
Sbjct: 766 VGASCEPNYWTYCLLLK 782



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 183/374 (48%), Gaps = 1/374 (0%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V +QL + G  P+ V Y ++I   CK GD+  A   FR + E GL     T   L+ G  
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           + G  +     +  M L G   + Y+Y  LI   C    V E   LF  M+    + NV 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVR 289

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            +  LI GLCK  RV +A  L D M   G+ P+V+TYN +I G+   G  + A ++   +
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           + NG  P   TYN LI        ++ A +L+    + G TP+ VT+T LI+ +  ++  
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A  M + M  S    D+  +G LI+ L  K  +KEA +L N +    L PN + Y  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I GYCK G    AL +L  M   G  PN  +Y+S +  L +D K  +A  LL +M K G+
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528

Query: 557 KPSVSLYNILYRAK 570
            P+V  Y  L + +
Sbjct: 529 IPNVITYTTLLQGQ 542



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 19/375 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+  +D A     +M+D G  P S T++ LL  + K    ++      +  
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++  ++++ ILI      G  + A  + N++   G  P+   YT  I+  CK G +E
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  K+   G+     TY +LI G    G     F   ++M      P+ +TY CL+
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLL 780

Query: 288 HEYCNEGKVSE-----------------GFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
            ++  +G ++                   ++L + M    +   V TY++LI G CK  R
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA  LLD M   G+SPN   Y  LI   CD    +KA    + +   G  P + +Y +
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+      G+ +    L  ++ E G    EV + IL D  +++  ++  F+M S+M+K  
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY 960

Query: 451 FSPDVYTYGVLIHGL 465
                 TY ++ + +
Sbjct: 961 CCISSQTYALVTNKM 975



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 149/381 (39%), Gaps = 39/381 (10%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLT-QLFPSSSNPVTKSR----------LYESIID 114
           A TLI ++I    T  S+T   LL  L  Q   + + P+               Y  +ID
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFFSENRCK 170
             L+    D A   +++M  SG +P + T+    +F+   C      D   L     R  
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYT---VFINSYCKEGRLEDAEDLILKMEREG 734

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG------ 224
           V  DV ++ ILI GC   G +++AF  L ++      PN   Y  L+    K        
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 225 ----------DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
                     +++    L  ++ + GL  T  TY+ LI G  K G  ++     + M   
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+SP+   Y  LI   C+     +       M        + +Y  L+ GLC E   ++ 
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + L   +   G + + + +  L DG   AG  D  F++ + ++      S  TY ++   
Sbjct: 915 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNK 974

Query: 395 FSKAGNSKMASDLVREMEERG 415
                  +++S LV E+ E  
Sbjct: 975 M-----HEVSSSLVSEVREEA 990


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 213/399 (53%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ D  +F  LI G C  G + +A  + N++   G  PNV+ Y ++I+G CKNG+   A 
Sbjct: 162 IQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAV 221

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +FRK+ +        TY  +I  L K+ L  +  EF  +M   G+ P + TYN ++H +
Sbjct: 222 RVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGF 281

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+++E  +LF EM  R V  + VT+N L+ GLCKE  V EA  + + M   G  PN 
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN L+DG+C   + D+A ++   +   G +P++ +YN+LI  + K+     A  L+ E
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+ +TP  VTY+ L+    +     +A  ++  M  SG  PD+  Y +L+ G C  G+
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA KL   M E +++PN ++Y ++I G    G    A  L  +++  G+ P+I +Y+ 
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  L ++G   EA     +M   G  P    YN++ + 
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQG 560



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 208/407 (51%)

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F+   R      V  FG  +    +    + A  + NQ++  G + NV     LI+  C+
Sbjct: 84  FYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
              ++ A  +  K+ +LG+     T+  LI GL   G  K+    + +M  +G  P++ +
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN +I+  C  G      ++F +M       NVVTYNT+I  LCK+  V EA   L +M 
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             GI P+V+TYN ++ GFC  G+ ++A RLF ++      P  VT+N+L+    K G   
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  +   M E+G  P+  TY  L+D +   + M++A ++  +M   G +P++ +Y +LI
Sbjct: 324 EARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILI 383

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +G C    M EA +L + M E  L P+ V Y+ ++ G C+ G    AL L  EM   GL+
Sbjct: 384 NGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL 443

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P++ +YS  +   C+ G   EA  LL +M +  +KP++ LY IL R 
Sbjct: 444 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 226/448 (50%), Gaps = 1/448 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++M+    RP    F   L  + K   +       ++ +   V  +VYS  +L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ A  V+ ++ ++G  P+ + + +LI+G C  G I+ A  LF ++   G 
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +Y  +I GL KNG        + KM+ N   P++ TYN +I   C +  V+E  +
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
              EM  R +  +VVTYNT++ G C   ++ EA RL  +M    + P+ +T+N L+DG C
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  +   +   G  P+  TYN L+  +        A  ++  M  +G  P+  
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y ILI+ + +S  M +A  + S M +   +PD  TY  L+ GLC  G  +EA  LF  M
Sbjct: 378 SYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEM 437

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             + L P+ + Y++++ G+CK G+   AL+LL EM+E+ + PNI  Y+  I  +   GK 
Sbjct: 438 CSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKL 497

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             A+ L +++   G++P +  YN++ + 
Sbjct: 498 EVAKELFSKLSADGIRPDIWTYNVMIKG 525



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 216/396 (54%), Gaps = 5/396 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGI 180
           +A+  F++M+ SG  P   ++N+++  + K+ +       F    +NR K   +V ++  
Sbjct: 184 EAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKP--NVVTYNT 241

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+   +N+A E L+++ + G  P+VV Y +++ G C  G +  A  LF+++    
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++    T+ +L+ GL K G+  +     E M   G  P+ YTYN L+  YC   ++ E  
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+   M  +  A N+ +YN LI G CK  R+ EA+RLL +M    ++P+ +TY+ L+ G 
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G   +A  LF ++ S+G  P ++ Y++L+  F K G+   A  L++EM ER I P+ 
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           + YTILI     +  +E A E++S +   G  PD++TY V+I GL  +G   EA + F  
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           M +    P+   YN++I G+ +  +S  A++L+ EM
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 1/290 (0%)

Query: 278 PSLYTYNC-LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           PSL   +C       N+  + +    F  M       +VV +   +  + K+ +   A  
Sbjct: 58  PSLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVS 117

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L +QM + G++ NV + N LI+  C     D A  +  ++   G  P  +T+N LI    
Sbjct: 118 LCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLC 177

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
             G  K A  L  EM   G  P+ ++Y  +I+   ++ +   A  ++  M+++   P+V 
Sbjct: 178 NEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVV 237

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  +I  LC    + EA +  + M +  + P+ V YN ++ G+C  G    A RL  EM
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + ++P+  +++  +  LC++G   EA  +   M + G +P+   YN L
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 212/395 (53%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + +F  LI   C+ G   +A E+ + +   G  P+V  YT++I+G CK G+   A  L +
Sbjct: 168 IVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLK 227

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E G      TY+ +I    K+    +  + +  M++ G+SP ++TYN LI   CN  
Sbjct: 228 KMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFS 287

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +  E   L +EMR   +  ++VT+N L+  +CKE +V EA+ +L  M   G+ P+V+TY+
Sbjct: 288 QWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYS 347

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ G+    E  +A +LF+ + + G  P V +YN+LI  + K      A  L  EM  +
Sbjct: 348 SLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQ 407

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+TP+ V+Y  LI    +   + +A  ++  M  +G  P+++TY +L+ G C +G   +A
Sbjct: 408 GLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKA 467

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF +M  T  +PN V+YN++I   CK GN   A +L  E+  KGL PN   Y++ I  
Sbjct: 468 FRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIING 527

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC++G   EA      M + G  P    YN++ R 
Sbjct: 528 LCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 221/441 (50%), Gaps = 36/441 (8%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A     +++  G++P   TF +L+ ++ K   F +    F +   +    DVY++  +
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G+   A  +L ++EE G  PNVV Y+++ID   K+  +  A  +F  +   G+
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE--- 298
                TY  LI GL      K+      +M+   + P + T+N L+   C EGKVSE   
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 299 ----------------------GF----------KLFDEMRHREVACNVVTYNTLICGLC 326
                                 G+          KLFD M  +    +V +YN LI G C
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  R+ EA++L ++M   G++PN ++YN LI G C  G   +A  LF  + +NG  P++ 
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY++L+  F K G    A  L R M+     P+ V Y ILID+  +S ++  A +++S +
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  P+   Y  +I+GLC +G + EA + F +M E    P+++ YN++I G+    + 
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569

Query: 507 YRALRLLGEMNEKGLVPNIAS 527
            RA++L+GEM +KG + ++ +
Sbjct: 570 SRAVQLIGEMRDKGFIADVGT 590



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 194/370 (52%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           Q+E  G SPN+   + LI+       ++ A  +  KI +LGL  T  T+T LI  L K G
Sbjct: 123 QMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG 182

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E ++ M   G  P +YTY  +I+  C  G+ +    L  +M       NVVTY+
Sbjct: 183 KFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYS 242

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           T+I    K+ RV EA  +   MK+ GISP++ TYN LI G C+  +  +A  L N+++S 
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P +VT+NVL+    K G    A  +++ M E G+ P  VTY+ L+  +    ++ +A
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +++  M   G  PDV++Y +LI+G C    + EA +LFN M    L PN+V YN +I G
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            C+ G+   A  L   M+  G +PN+ +YS  +   C+ G + +A  L   M     KP+
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 560 VSLYNILYRA 569
           + +YNIL  A
Sbjct: 483 LVMYNILIDA 492



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS-KMASDLVREMEERGI 416
           D  C     D A   FN +      P ++ +  L+ A  K G        L ++ME  G+
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P+  T +ILI+ F     ++ AF + + + K G  P + T+  LI+ LC  G   +A +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI---- 532
           LF+ M      P+   Y  +I G CK G +  A  LL +M E G  PN+ +YS+ I    
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 533 ------------------GV-------------LCQDGKWPEAEVLLNQMLKLGLKPSVS 561
                             G+             LC   +W EA  LLN+M  L + P + 
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 562 LYNIL 566
            +N+L
Sbjct: 310 TFNVL 314


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 219/417 (52%), Gaps = 1/417 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           +AL  F +M+  G +P   T+ +L+  + K  +      L  S  +   + +V  F  LI
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C+   + +AF + +++   G SPN+V Y SLI G CK  + +    L  ++ +  ++
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               T   ++  L K G+  +  +  + M   GV P++ TYN L+  +C   +V    K+
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FD M H++   NV++YNTLI G CK   V +A  L ++M    ++PN +TYN LI G C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A  LF+++ + GQ P +VTY  L     K  +   A  L++ +E     P    
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT ++D   R+ ++E A +++S +   G  P+V+TY ++IHGLC +G + EASKLF+ M 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           +    PND  YN++  G+ +   + R + LL EM  +G   ++++ +  +G+L  DG
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 230/488 (47%), Gaps = 38/488 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS---------------------------- 154
           D+AL  F++ML     P +  FN LL  + K+                            
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 155 ----CSFDKGWLFFSENRCKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
               C  ++    FS     ++L    D  +F  LI+G C  G + +A  + +++   GF
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            PNVV Y +LI+G CK G+   A  L R + +         ++ LI  L K+    + F 
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            + +M   G+SP++ TYN LIH  C   +      L +EM   ++  +V T NT++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           KE  V EA  ++D M   G+ PNV+TYN L+DG C   E D A ++F+ +       +V+
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           +YN LI  + K  +   A  L  EM  + +TP+ VTY  LI        ++ A  ++  M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  PD+ TY  L   LC   ++ +A  L  ++  +  +P+  +Y  ++ G C+ G  
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L   ++ KGL PN+ +Y+  I  LC+ G   EA  L ++M K G  P+   YN++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 567 YRA--KNN 572
            R   +NN
Sbjct: 532 TRGFLRNN 539



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%), Gaps = 1/231 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + K +  D+A++ F +M    + P + T+N+L+  +            F E  
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ D+ ++  L    C+   L+KA  +L  +E   + P++ IYT+++DG C+ G++E
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  +   GL     TY ++I GL K GL  +  + + +M  NG SP+  TYN + 
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
             +    +     +L +EM  R  + +V T   L+  L  +   Q  +++L
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 217/430 (50%), Gaps = 8/430 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFFSEN 167
           ++  + K    ++ L +  +M + G RP   TFNSL+  + +            +   E 
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + D++++  LI G C+ G++ +A E+LNQ+    FSPN V Y +LI   CK   +E
Sbjct: 347 ---FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L R +   G++    T+  LI GL      +   E +E+M+  G  P  +TYN LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ G++ E   L  EM     + NVVTYNTLI G CK  R++EAE + D+M++ GIS
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            NV+TYN LIDG C     ++A +L +Q+   G  P   TYN L+  F +AG+ K A+D+
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V+ M   G  P  VTY  LI    ++  +E A  +   +Q  G      TY  +I  L  
Sbjct: 584 VQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFR 643

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY-RALRLLGEMNEKGLVPNIA 526
           +    EA +LF  M E    P+ V Y ++  G C  G     A+  L EM +KG +P+ +
Sbjct: 644 EKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFS 703

Query: 527 SYSSTIGVLC 536
           S+      LC
Sbjct: 704 SFLMLAEGLC 713



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 253/559 (45%), Gaps = 25/559 (4%)

Query: 32  FNWASRQGLQHTPQSISII-----LRLLLSKMSSHSH-AAAQTLILKIISGRITSS---S 82
           + W     L   P ++S          L+S  S+H H   A +     +S   T+    +
Sbjct: 10  YPWTPPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQN 69

Query: 83  FTPRSL------------LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           FTP+ L            +  L        N V  S +YE ++    K            
Sbjct: 70  FTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQ 129

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEA 188
           +M  +G   R  TF  L+    K   FD+        E    ++LD +++  L+    + 
Sbjct: 130 EMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDG 189

Query: 189 GDLNKAFEVLN-QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             L K  E++N ++   G  P+V  +  LI   C+   I  A ++  ++G  GL   + T
Sbjct: 190 NKL-KLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKT 248

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +T L+ G  + G         E+M   G   S  T N L+H YC EG++ E     DEM 
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS 308

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           +     +  T+N+L+ GLC+   V+ A  +LD M   G  P++ TYN LI G C  GE +
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  + NQ+     SP+ VTYN LI    K    + A++L R +  +GI P   T+  LI
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 428

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                +++   A E++  M+  G  PD +TY +LI  LC +G ++EA  L   M  +   
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN +I G+CK      A  +  EM  +G+  N+ +Y++ I  LC++ +  EA  L
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQL 548

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           ++QML  GLKP    YN L
Sbjct: 549 MDQMLMEGLKPDKFTYNSL 567



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 221/440 (50%), Gaps = 1/440 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M+  G++P   TFN L+  + ++       L   E     +  D  +F  L++G  E G
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           ++N A  +  Q+   G   + V    L+ G CK G IE       ++   G    + T+ 
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ GL + G  K   E  + M   G  P ++TYN LI   C  G+V E  ++ ++M  R
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           + + N VTYNTLI  LCKE +V+EA  L   +   GI P+V T+N LI G C       A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++K+ G  P   TYN+LI +    G  + A  L++EME  G + + VTY  LID 
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F ++  +E+A E++  M+  G S +V TY  LI GLC    ++EA++L + M    L+P+
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN ++  +C+ G+  +A  ++  M   G  P+  +Y + I  L + G+   A  LL 
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            +   G+  +   YN + +A
Sbjct: 621 TVQLKGMVLAPQTYNPVIKA 640



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 229/457 (50%), Gaps = 2/457 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I+++ K  L D+A+     M +  G++  + T+N LL  ++         +  S    +
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            ++ DV +F ILIK  C A  +  A  ++ ++   G SP+   +T+L+ G  + G++  A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +  ++   G  ++  T  VL+ G  K G  ++   F ++M   G  P  +T+N L++ 
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C  G V    ++ D M       ++ TYN+LI GLCK   V+EA  +L+QM +   SPN
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +TYN LI   C   + ++A  L   L S G  P V T+N LI+      N ++A +L  
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM+ +G  P E TY +LIDS      +E+A  +   M+ SG S +V TY  LI G C   
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++EA ++F+ M    +  N V YN +I G CK      A +L+ +M  +GL P+  +Y+
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S +   C+ G   +A  ++  M   G +P    Y  L
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASK 476
           P   T   L D+  R  D +   ++     K   F P    Y  ++  L   G+     +
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK-GLVPNIASYSSTIGVL 535
           +   M  T  E     + ++I  Y K      A+ ++  M E+ GL  +  +Y+  + VL
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               K    E++ ++M+  G+KP V+ +NIL +A
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/404 (34%), Positives = 215/404 (53%), Gaps = 6/404 (1%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           LF    R ++ L   +F I+++  C AG   +A E+L Q+     SPN V Y ++I G C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFC 158

Query: 222 KNGDIERAKMLFRKIGELGLVAT-QHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPS 279
             G ++    + R++ E G +A  ++TY  +I G  K G  +D  + +++M   G V P+
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
              YN LI  YC++G +    +   EM  R V+  V TYN  +  L  E R  EA  L++
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVE 278

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G++P+  TYN LI+G+C  G+  KA ++F  +   G   +VVTY  LI A S  G
Sbjct: 279 EMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKG 338

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             +    L  +   RGI P    Y  LI+S     DM++AFE+   M+K   +PD  TY 
Sbjct: 339 MVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYN 398

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ GLC+ G + EA  L   M +  ++P+ V YN +I GY  +G+   A+++  EM  K
Sbjct: 399 TLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGK 458

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G  P + +Y++ I  LC +G+  +AE L+ +M+  G+ P  S Y
Sbjct: 459 GFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 229/505 (45%), Gaps = 47/505 (9%)

Query: 17  ISRMAKLPPLKAFS----LFNWASRQGLQHTPQSISIILRL-----------LLSKMSSH 61
           +S +A LP L A      L   AS  G  HT  S+S+  RL           L   +SS 
Sbjct: 37  LSPLAVLPHLAATPSLPHLLLTASVAGRPHT-TSLSLYSRLKSLSLPIPTASLHPLLSSL 95

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRL 121
             A A  L   I   R+  S+ T   +L HL     ++  PV                  
Sbjct: 96  PPAPAFVLFADIFRLRLPLSTTTFNIMLRHLC----TAGKPV------------------ 133

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFG 179
             +AL    QM      P + T+N+++           G     E   R  +  D Y++ 
Sbjct: 134 --RALELLRQM----PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYA 187

Query: 180 ILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            +I G C+ G +  A +V ++ L E    PN V+Y +LI G C  G++E A     ++ +
Sbjct: 188 TVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVD 247

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+  T  TY + +  LF  G   +     E+M   G++P  +TYN LI+ YC EGK  +
Sbjct: 248 RGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKK 307

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             K+F+ M  + +   VVTY +LI  L  +  VQE +RL +     GI P++  YN LI+
Sbjct: 308 AMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALIN 367

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C  G+ D+AF +  +++    +P  VTYN L+R     G    A  L+ EM +RGI P
Sbjct: 368 SHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQP 427

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             V+Y  LI  +    D++ A ++   M   GF+P + TY  +I GLC+ G   +A  L 
Sbjct: 428 DLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLV 487

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKE 503
             M    + P+D  Y  +I G   E
Sbjct: 488 KEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 9/351 (2%)

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +LF  I  L L  +  T+ +++  L   G      E   +M     SP+  TYN +I 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIA 155

Query: 289 EYCNEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-I 346
            +C  G+V  G ++  EMR R  +A +  TY T+I G CK  +V++A ++ D+M   G +
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + YN LI G+CD G  + A R   ++   G S +V TYN+ +      G +  A  
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           LV EM E+G+ P   TY ILI+ + +    +KA +M+ +M   G    V TY  LIH L 
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           MKG ++E  +LFN      + P+  +YN +I  +C  G+  RA  ++GEM +K + P+  
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           +Y++ +  LC  G+  EA  L+ +M K G++P +  YN L   Y  K +I+
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIK 446



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 204/438 (46%), Gaps = 23/438 (5%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSS 60
           T +L   ++ LPP  AF LF    R  L  +  + +I+LR L            L +M S
Sbjct: 85  TASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS 144

Query: 61  HSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
            +     T+I    + GR+ +           + +              Y ++I    K 
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAG--------IEIMREMRERGGIAPDKYTYATVISGWCKV 196

Query: 120 RLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
              + A   F +ML  G V P +  +N+L+       + +    +  E   + V + V +
Sbjct: 197 GKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + + +      G   +A  ++ ++ E G +P+   Y  LI+G CK G  ++A  +F  + 
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+ AT  TYT LI  L   G+ ++    +      G+ P L+ YN LI+ +C  G + 
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMD 376

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F++  EM  + +  + VTYNTL+ GLC   R+ EA  L+++M   GI P++++YN LI
Sbjct: 377 RAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLI 436

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+   G+   A ++ +++   G +P+++TYN +I+     G    A DLV+EM   GIT
Sbjct: 437 SGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGIT 496

Query: 418 PSEVTYTILIDSFVRSDD 435
           P + TY  LI+     D+
Sbjct: 497 PDDSTYISLIEGLTTEDE 514


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 280/573 (48%), Gaps = 46/573 (8%)

Query: 30  SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
           + F+W+S +    TPQ +     L +   +S     A  ++ K++  R       P  +L
Sbjct: 105 NFFHWSSSK--MSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKP-----PLEIL 157

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
             L + +       +   +++  ID        ++A   F   +  G  P     N+L+ 
Sbjct: 158 DSLVRCYREFGG--SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMR 215

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            ++K+      W ++ S    K+  DVY++  +IK  C+ GD+ K   VL+++E+    P
Sbjct: 216 DLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKP 274

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N+  Y + I G C+ G ++ A  + + + E GL    HTYT+L+ G  K    K+    +
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E M  +G++P+ +TY  LI  +  EG + E  ++ DEM  R +  NVVTYN +I G+ K 
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             + +A  L ++M MAGI P+  TYN LIDG+  + +  KA  L  ++K+   +PS  TY
Sbjct: 395 GEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           +VLI     + + + A++++ +M   G+ P+   Y  LI ++V+    E A E+  +M  
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKL------------------------------- 477
           +G  PD++ Y  LI GLC    ++EA  L                               
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV 574

Query: 478 ----FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
               F  M  + + PN+V+Y ++I G+C  GN+  AL     M EKGL+P+I +YS+ I 
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L ++GK  EA  +  + LK G+ P V LYN L
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 168/599 (28%), Positives = 281/599 (46%), Gaps = 56/599 (9%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           KA SLFN     G++    + ++++      + SH  A A  L+ ++ + ++T S FT  
Sbjct: 399 KAMSLFNEMLMAGIEPDTWTYNLLID---GYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 87  SL---LCH----------LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
            L   LCH          L Q+  +   P     +Y ++I A+++    + A+     M+
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKP--NVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
            +GV P    +N L+I + ++   ++  +   +   K ++ + +++G  I    ++G++ 
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A      +   G  PN VIYT LI G C  G+   A   F+ + E GL+     Y+ +I
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L KNG  K+    + K    GV P ++ YN LI  +C EG + +  +L+DEM H  + 
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693

Query: 313 CNVVTYNTLI--CGLCKEMRVQEAERLLDQMKMAGISPNVITY----------------- 353
            N+V YNTLI   G CK   + EA +L D+M   GISP+   Y                 
Sbjct: 694 PNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 753

Query: 354 -----------------NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
                            N LID FC  G+  +A  LF+ +     +P++VTY +LI A+ 
Sbjct: 754 SLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 813

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KA   + A  L  +ME R I P+ +TYT L+ S+ +  +  K   ++  M+  G + D  
Sbjct: 814 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAI 873

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            YGV+    C +G   EA KL N      ++  D V++ +IF  CKE      L LL EM
Sbjct: 874 AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP-SVSLYNILYRAKNNIE 574
            ++ L  +  + ++ +    + G   EA  +L  M +LG  P S+SL + +   +++++
Sbjct: 934 GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMK 992



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 231/516 (44%), Gaps = 74/516 (14%)

Query: 125 ALFY--FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
            LF+  +  M+++ + P   T+ +++    K     KG +  SE   + + +++++   I
Sbjct: 224 GLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFI 283

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C+ G +++A EV   + E G  P+   YT L+DG CK    + AK++F  +   GL 
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 243 ATQHTYTVLICGLFKNG------------------------------LQKDG-----FEF 267
             + TYT LI G  K G                              + K G        
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           + +M + G+ P  +TYN LI  Y     +++  +L  EM+ R++  +  TY+ LI GLC 
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 328 EMRVQEAERLLDQMKMAGISPNVITY---------------------------------- 353
              +Q+A  +LDQM   G+ PNV  Y                                  
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523

Query: 354 -NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            N LI G C A + ++A  L   +   G  P+  TY   I  +SK+G  ++A    ++M 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             GI P+ V YTILI       +  +A   +  M + G  PD+  Y  +IH L   G  K
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  +F    +T + P+  +YN +I G+CKEG+  +A +L  EM   G+ PNI  Y++ I
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 533 GV--LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                C+ G   EA  L ++M+  G+ P   +Y IL
Sbjct: 704 NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 739



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 198/393 (50%), Gaps = 1/393 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++   +A  +   ++V   + E    P+V  YT++I   CK GD+ + KM+  ++ E  
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKE 271

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY   I GL + G   +  E  + M   G+ P  +TY  L+  +C + +  E  
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +F+ M    +  N  TY  LI G  KE  ++EA R+ D+M   G+  NV+TYN +I G 
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             AGE  KA  LFN++   G  P   TYN+LI  + K+ +   A +L+ EM+ R +TPS 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY++LI     S D++KA E+   M ++G  P+V+ YG LI     +   + A +L   
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    + P+   YN +I G C+      A  LL +M EKG+ PN  +Y + I +  + G+
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
              AE     ML  G+ P+  +Y IL +   ++
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 1/295 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+L   N L+ +      +   +K++  M   ++  +V TY  +I   CK   V + 
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + +L +M+     PN+ TYN  I G C  G  D+A  +   +   G  P   TY +L+  
Sbjct: 262 KMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F K   SK A  +   M   G+ P+  TYT LID F++  ++E+A  +   M   G   +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  +I G+   G M +A  LFN M    +EP+   YN++I GY K  +  +A  LL 
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM  + L P+  +YS  I  LC      +A  +L+QM++ G+KP+V +Y  L +A
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 228/425 (53%), Gaps = 4/425 (0%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S P+     +  ++    KS+  D  +  FH M   G+     ++N ++  + +   F  
Sbjct: 4   SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI 63

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                 +  +   E DV +   LI G C+   +  A ++++++EEMGF P+VVIY ++ID
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK G +  A  LF ++   G+ A   TY  L+ GL  +G   D       M +  + P
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           ++ T+  +I  +  EGK SE  KL++EM  R V  +V TYN+LI GLC   RV EA+++L
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           D M   G  P+V+TYN LI+GFC +   D+  +LF ++   G     +TYN +I+ + +A
Sbjct: 244 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A ++   M+ R   P+  TY+IL+     +  +EKA  ++  MQKS    D+ TY
Sbjct: 304 GRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 360

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            ++IHG+C  GN+++A  LF S+    L+P+ V Y  MI G+C++    ++  L  +M E
Sbjct: 361 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420

Query: 519 KGLVP 523
            GL+P
Sbjct: 421 DGLLP 425



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M+ S   P    F+ +L  + KS ++D    LF     C +  D+YS+ I+I   C    
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
              A  V+ ++ + G+ P+VV  +SLI+G C+   +  A  L  K+ E+G       Y  
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I G  K GL  D  E +++M+ +GV     TYN L+   C  G+ S+  +L  +M  R+
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  NV+T+  +I    KE +  EA +L ++M    + P+V TYN LI+G C  G  D+A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++ + + + G  P VVTYN LI  F K+      + L REM +RG+    +TY  +I  +
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   + A E++S M      P++ TY +L++GLCM   +++A  LF +M ++++E + 
Sbjct: 301 FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN++I G CK GN   A  L   ++ KGL P++ SY++ I   C+  +W ++++L  +
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417

Query: 551 MLKLGLKP 558
           M + GL P
Sbjct: 418 MQEDGLLP 425



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 3/300 (1%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            +  M++ G+   LY+YN +I+  C   +      +  +M       +VVT ++LI G C
Sbjct: 32  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 91

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  RV +A  L+ +M+  G  P+V+ YN +IDG C  G  + A  LF++++ +G     V
Sbjct: 92  QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 151

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L+     +G    A+ L+R+M  R I P+ +T+T +ID FV+     +A ++Y  M
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    PDV+TY  LI+GLCM G + EA ++ + M      P+ V YN +I G+CK    
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 271

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +L  EM ++GLV +  +Y++ I    Q G+   A+ + ++M     +P++  Y+IL
Sbjct: 272 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 328



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 123/253 (48%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++V ++ ++  + K         L   M++ GI  ++ +YN +I+  C       A  + 
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++   G  P VVT + LI  F +      A DLV +MEE G  P  V Y  +ID   + 
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +  A E++  M++ G   D  TY  L+ GLC  G   +A++L   M    + PN + +
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I  + KEG    A++L  EM  + + P++ +Y+S I  LC  G+  EA+ +L+ M+ 
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 248

Query: 554 LGLKPSVSLYNIL 566
            G  P V  YN L
Sbjct: 249 KGCLPDVVTYNTL 261


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 242/494 (48%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++DAH ++   D A     QM +  V P   TF+S+L  ++K     K   +  + +
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +V ++G LI G  +      A +V   +   G   N  I  SL++G  KNG+IE
Sbjct: 462 DSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIE 521

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF+ +GE GL+     Y  L+ GLFK G      +  +++    +SP    YN  I
Sbjct: 522 EAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFI 581

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK SE      EMR+  +  +  TYNT+I   C+E    +A +LL++MK + I 
Sbjct: 582 NCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIK 641

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT-------------------- 387
           PN+ITY  L+ G  +AG  +KA  L N++ S G +P+ +T                    
Sbjct: 642 PNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEV 701

Query: 388 ---------------YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                          YN L+      G ++ A+ ++ EM  RGI P  +T+  LI    +
Sbjct: 702 HELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCK 761

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           S  ++ AF  Y+ M   G SP++ T+  L+ GL   G + EA  +   M +  LEPN++ 
Sbjct: 762 SSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLT 821

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y++++ GY K+ N   ALRL  EM  KG +P  ++Y+S I    + G   +A+ L ++M 
Sbjct: 822 YDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMK 881

Query: 553 KLGLKPSVSLYNIL 566
           + G+  + S Y+IL
Sbjct: 882 RRGVLHTSSTYDIL 895



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 218/429 (50%), Gaps = 18/429 (4%)

Query: 160 GWLFFSENRCKVE------------------LDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           GW    +  CKV+                  LDV  +  L+ G   +GD + A+EV  ++
Sbjct: 191 GWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM 250

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           +  G  P+VV +T+LI   CK   IE A  L+  +   G++    T + L+ GL ++G  
Sbjct: 251 KADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            + +  + +M   GV+P+  TY   I       +V+E   L  EM  R VA ++V Y T+
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  L KE +++EA+ +L       I+PN +TY  L+D  C AG  D A ++  Q++    
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           SP+VVT++ ++    K G    A+  +R+M++ GI P+ VTY  LID F +    E A +
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +Y  M   G   + +    L++GL   GN++EA  LF  M E  L  + V Y  ++ G  
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLF 550

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K GN   AL++  E+ E+ L P+   Y+  I  LC+ GK+ EA+  L +M   GL+P  +
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610

Query: 562 LYNILYRAK 570
            YN +  A+
Sbjct: 611 TYNTMISAQ 619



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y +++     S  +D A     +M   GV P   T  +L+    K    ++ + L+    
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMV 286

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  DV +   L+ G C  G  ++A+ +  +++++G +PN V Y + ID   K   + 
Sbjct: 287 RSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVN 346

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  L  ++   G+      YT ++  L K G  ++  +       + ++P+  TY  L+
Sbjct: 347 ESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLV 406

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +    ++  +M  + V+ NVVT+++++ GL K   + +A   + +MK +GI+
Sbjct: 407 DAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  LIDGF      + A  ++  +   G   +    + L+    K GN + A  L
Sbjct: 467 PNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M ERG+    V Y  L+D   ++ +M  A ++   + +   SPD   Y V I+ LC 
Sbjct: 527 FKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCR 586

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   EA      M  T LEP+   YN MI   C+EGN+ +AL+LL EM    + PN+ +
Sbjct: 587 LGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLIT 646

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y++ +  L + G   +A+ LLN+M   G  P+   Y  + +A
Sbjct: 647 YTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 216/482 (44%), Gaps = 36/482 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID   K +  + AL  +  ML  GV   +   +SL+  + K+ + ++    F +  
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG 531

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              + LD  ++  L+ G  + G++  A +V  +L E   SP+ V+Y   I+  C+ G   
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK   +++   GL   Q TY  +I    + G      +   +M+ + + P+L TY  L+
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651

Query: 288 HEYCNEGKVSEGFKLFDEM----------RHREV--AC---------------------- 313
                 G V +   L +EM           +R V  AC                      
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLH 711

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++  YNTL+  LC     ++A  +LD+M   GI+P+ IT+N LI G C +   D AF  
Sbjct: 712 ADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFAT 771

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + Q+   G SP++ T+N L+     AG    A  ++ EM++ G+ P+ +TY IL+  + +
Sbjct: 772 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAK 831

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +  +A  +Y  M   GF P   TY  LI      G M +A +LF+ M    +      
Sbjct: 832 KSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSST 891

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y++++ G+ K  N      LL +M E G  P+  + SS      + G   EA  LL  + 
Sbjct: 892 YDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLF 951

Query: 553 KL 554
           K+
Sbjct: 952 KV 953



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 235/536 (43%), Gaps = 74/536 (13%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +++D   +     +A   F +M   GV P   T+ + +  + K    ++      E   +
Sbjct: 299 ALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSR 358

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V +D+  +  ++    + G + +A +VL        +PN V YT L+D  C+ G+I+ A
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGA 418

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           + +  ++ E  +     T++ ++ GL K G       +  KM+ +G++P++ TY  LI  
Sbjct: 419 EQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---- 345
           +           ++ +M H  V  N    ++L+ GL K   ++EAE L   M   G    
Sbjct: 479 FFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538

Query: 346 -------------------------------ISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                                          +SP+ + YN  I+  C  G+  +A     
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++++ G  P   TYN +I A  + GN+  A  L+ EM+   I P+ +TYT L+   + + 
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAG 658

Query: 435 DMEKA-----------------------------------FEMYSLMQKSGFSPDVYTYG 459
            +EKA                                    E++ LM  +G   D+  Y 
Sbjct: 659 VVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYN 718

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+H LC  G  ++A+ + + M    + P+ + +N +I G+CK  +   A     +M  +
Sbjct: 719 TLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 778

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNN 572
           GL PNIA++++ +G L   G+  EA+ ++ +M K+GL+P+   Y+IL   Y  K+N
Sbjct: 779 GLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSN 834



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 173/364 (47%), Gaps = 6/364 (1%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           + + V Y   + G  + G    A  +  ++ + G+     T +  + GL + GL  +   
Sbjct: 114 AADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAA 173

Query: 267 FYEKM----QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             E +     ++G+   +  +N LI  YC    ++    + + M  + ++ +VV YNTL+
Sbjct: 174 LAEMLVRGRGIDGLG--VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLV 231

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G         A  + ++MK  G+ P+V+T+  LI  +C     ++AF L+  +  +G  
Sbjct: 232 AGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVL 291

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VVT + L+    + G    A  L REM++ G+ P+ VTY   IDS  +   + ++  +
Sbjct: 292 PDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M   G + D+  Y  ++  L  +G ++EA  +        + PN V Y +++  +C+
Sbjct: 352 LGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCR 411

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            GN   A ++L +M EK + PN+ ++SS +  L + G   +A   + +M   G+ P+V  
Sbjct: 412 AGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVT 471

Query: 563 YNIL 566
           Y  L
Sbjct: 472 YGTL 475



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 2/296 (0%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V+    +YN  +     +G       +  EM  R V  + VT +T + GL +   V EA 
Sbjct: 113 VAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAA 172

Query: 336 RLLDQM-KMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            L + + +  GI    V+ +N LIDG+C   +   A  +  ++ + G S  VV YN L+ 
Sbjct: 173 ALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVA 232

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F  +G++  A ++   M+  G+ PS VT+T LI  + +   +E+AF +Y  M +SG  P
Sbjct: 233 GFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           DV T   L+ GLC  G   EA  LF  M +  + PN V Y   I    K      +L LL
Sbjct: 293 DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLL 352

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GEM  +G+  ++  Y++ +  L ++GK  EA+ +L   L   + P+   Y +L  A
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDA 408


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 280/564 (49%), Gaps = 57/564 (10%)

Query: 19  RMAKLPPLK---AFSLFNWASRQ-GLQHTPQSISIILRL---LLSKMSSHSHAAAQTLIL 71
           + A L P+    A     W  +Q GL+  P  ++ IL +   +L +   + +A +   IL
Sbjct: 23  KFASLRPIHGVLALKFLKWVIKQPGLE--PNHLTHILGITTHVLVRARLYGYAKS---IL 77

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFP-SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           K ++ + + S+F    L   L   +P  SSNP     +++ +I  +L+  +   A+  F 
Sbjct: 78  KHLAQKNSGSNF----LFGVLMDTYPLCSSNPA----VFDLLIRVYLRQGMVGHAVNTFS 129

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
            ML  G +P   T N ++  ++K+C     W FF +    +V  +V SF ILI   C  G
Sbjct: 130 SMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQG 189

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA  +L  +E  G+ P +V Y +L+  CCK G  + A           LV   H   
Sbjct: 190 KLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFA-----------LVLIHH--- 235

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                                M+  G+   + TYN  I   C   + ++G+ +  +MR++
Sbjct: 236 ---------------------MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N V+YNTLI G  KE ++  A R+ ++M    +SPN+ITYN LI+G+C  G  ++A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            RL + +++N   P+ VT   L+    K+    +A +++        + + +++T++ID 
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R+  +++AF++   M K G  PD+ T+ VLI+G C  GN+ +A ++ + ++     PN
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPN 454

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           +V+++ +I+  CK GN Y  ++    MN  G   +  + +S +  LC++GK  EAE  L+
Sbjct: 455 NVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 550 QMLKLGLKPSVSLYNILYRAKNNI 573
            + ++GL P+   ++ +     N+
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANV 538



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 212/444 (47%), Gaps = 4/444 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           AL   H M   G++    T+N  +  + ++    +G+L   + R K +  +  S+  LI 
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G  + G +  A  V N++ E+  SPN++ Y  LI+G C NG+ E A  L   +    +  
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRP 348

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
            + T   L+ GL+K+          E+  +N  S +  ++  +I   C  G + E F+L 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM    V  +++T++ LI G CK   + +A+ ++ ++   G  PN + ++ LI   C  
Sbjct: 409 IEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +  + +  +  NGQ+    T N L+ +  + G    A + +  +   G+ P+ VT+
Sbjct: 469 GNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +I+ +    D   AF ++  M   G  P  +TYG L+  LC   N  EA KL   +  
Sbjct: 529 DCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L  + + YN +I    K GN   A+RL  EM +  ++P+  +Y+  +  L ++G+   
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 544 AEVLLNQMLKLGLKPSVSLYNILY 567
           A + L ++++   K  ++L +I+Y
Sbjct: 649 AFIFLGRLMQ---KEILTLNSIVY 669



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 205/469 (43%), Gaps = 2/469 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S  ++ II+ +        A   F +M+  G  P   T+ SLL  + K  +F +   
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 163 FFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              +  C  + +D  S+  LI    ++G+L +A  +  ++ +    P+   YT ++ G  
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 222 KNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           + G +  A +   ++ +  ++      YT  I GLFK G  K     +++M+  G+S  L
Sbjct: 642 REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
              N +   Y   GKV     L  + R++ V  N+ T+N L+ G  +   +    +L + 
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+ +G  PN +TY+ LI G C+ G  +   ++     +   +   +T+N+LIR   +  +
Sbjct: 762 MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
                DL   ME   ++  + T   + D  VR    +  F     M K GF P    Y  
Sbjct: 822 LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           ++  +C  G+++ A KL + M    +  +D     M+ G    G    A+ +L  M    
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +P  +++++ + V C+   + EA  L   M    +K  +  YN+L  A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISA 990



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/451 (21%), Positives = 182/451 (40%), Gaps = 37/451 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y ++I    KS    +A+  F +M+ + + P S T+  +L  +I+       ++F     
Sbjct: 598  YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 169  CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  + L+   +   I G  +AG    A  +  ++EE G S +++   S+ DG  + G +
Sbjct: 658  QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
              A  L  K     ++    T+ +L+ G  +       F+ Y  M+ +G  P+  TY+ L
Sbjct: 718  FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC-------------------- 326
            I   CN G +  G K+           + +T+N LI   C                    
Sbjct: 778  ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837

Query: 327  ---------------KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                           + M  Q     + +M   G  P    Y  ++   C  G+   AF+
Sbjct: 838  SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            L +Q+ + G S        ++R  +  G  + A  +++ M      P+  T+T L+  F 
Sbjct: 898  LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + D+ ++A  +  LM+      D+  Y VLI   C  G++  A   +  + +  L PN  
Sbjct: 958  KKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMT 1017

Query: 492  VYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             Y +++     +    R   +L ++N++GLV
Sbjct: 1018 TYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
            ++A++   +ML     P ++TF +L+    K  +F +   L       +V+LD+ ++ +L
Sbjct: 928  EEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVL 987

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I  CC  GD+  A +   ++++ G  PN+  Y  L+        + R +++ + + + GL
Sbjct: 988  ISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047

Query: 242  VA 243
            V+
Sbjct: 1048 VS 1049


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 220/418 (52%), Gaps = 1/418 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A     ++L  G +P + TF +L+  +       +    F +   +  + +V ++G L
Sbjct: 97  DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 156

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+   + +AF + +++   G SPN+V Y SLI G CK  + +    L  ++ +  +
Sbjct: 157 INGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 216

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T   ++  L K G+  +  +  + M   GV P++ TYN L+  +C   +V    K
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +FD M H++   NV++YNTLI G CK   V +A  L ++M    ++PN +TYN LI G C
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G    A  LF+++ + GQ P +VTY  L     K  +   A  L++ +E     P   
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT ++D   R+ ++E A +++S +   G  P+V+TY ++IHGLC +G + EASKLF+ M
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            +    PND  YN++  G+ +   + R + LL EM  +G   ++++ +  +G+L  DG
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 227/455 (49%), Gaps = 7/455 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGI 180
           D+AL  F++ML     P +  FN LL  + K+       L  S   +   +  DVY+  I
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKT-KHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGEL 239
           +I   C    ++ AF  L ++ ++G  P+   +T+LI G C  G I  A  LF K IGE 
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE- 144

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY  LI GL K+    + F  + +M   G+SP++ TYN LIH  C   +    
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L +EM   ++  +V T NT++  LCKE  V EA  ++D M   G+ PNV+TYN L+DG
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C   E D A ++F+ +       +V++YN LI  + K  +   A  L  EM  + +TP+
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY  LI        ++ A  ++  M   G  PD+ TY  L   LC   ++ +A  L  
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           ++  +  +P+  +Y  ++ G C+ G    A  L   ++ KGL PN+ +Y+  I  LC+ G
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 444

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
              EA  L ++M K G  P+   YN++ R   +NN
Sbjct: 445 LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 227/505 (44%), Gaps = 47/505 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+   K R   +A   F +M+  G+ P   T+NSL+  + K C +       +E  
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K+  DV++   ++   C+ G + +A +V++ +   G  PNVV Y +L+DG C   +++
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +     VA   +Y  LI G  K          +E+M    ++P+  TYN LI
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C+ G++ +   LF EM  R    ++VTY TL   LCK   + +A  LL  ++ +   
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  Y  ++DG C AGE + A  LF+ L S G  P+V TYN++I    K G    AS L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM + G +P++ TY ++   F+R+++  +  E+   M   GFS DV T  +L+  L  
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 468 KG----------------------------------------------NMKEASKLFNSM 481
            G                                               + +A   FN M
Sbjct: 513 DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM 572

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P+ V +  ++    K  +    L L  +M+  G+ P++ + +  I   C   + 
Sbjct: 573 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 632

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  +L ++LKLG +P V  Y  L
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTL 657



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 201/430 (46%), Gaps = 49/430 (11%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++ML     P +  F  LL  + K   +       ++ +   +  DVY+  IL
Sbjct: 563 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 622

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    L  AF VL +L ++GF P+VV Y +L++G C                    
Sbjct: 623 INSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------------- 662

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                                       KM   G+SP ++TYN LIH  CN  +      
Sbjct: 663 ----------------------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTT 694

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L +EM + ++  NVV ++T++  LCKE  +  A  ++D M   G+ P+V+TY  L+DG C
Sbjct: 695 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              E D+A ++F+ +   G  P+V +YN+LI  + +      A  L+ +M  +G+    V
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 814

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  LI        ++ A  ++  M  SG  PD+ TY +L+  LC   ++ EA  L  ++
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             + L+ + +VYN+ I G C+ G    A  L   ++ KGL P++ +Y+  I  LC+ G  
Sbjct: 875 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 934

Query: 542 PEAEVLLNQM 551
            EA  L  +M
Sbjct: 935 DEANKLFRKM 944



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 176/376 (46%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L++A    N++      P+ V +  L+    K         L R++   G+    +T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L         F    K+   G  P   T+  LI   C EGK+ E   LFD+M    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NVVTY TLI GLCK+ +V EA  +  +M   GISPN++TYN LI G C   E     
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L N++  +   P V T N ++ A  K G    A D+V  M  RG+ P+ VTY  L+D  
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
              ++++ A +++  M       +V +Y  LI+G C   ++ +A  LF  M   +L PN 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I G C  G    A+ L  EM  +G +P++ +Y +    LC++    +A  LL  
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 551 MLKLGLKPSVSLYNIL 566
           +      P + +Y  +
Sbjct: 386 IEGSNWDPDIQIYTTI 401



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 231/500 (46%), Gaps = 34/500 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + K +  D+A++ F +M    + P + T+N+L+  +            F E  
Sbjct: 293 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 352

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ D+ ++  L    C+   L+KA  +L  +E   + P++ IYT+++DG C+ G++E
Sbjct: 353 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  +   GL     TY ++I GL K GL  +  + + +M  NG SP+  TYN + 
Sbjct: 413 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL--------- 338
             +    +     +L +EM  R  + +V T   L+  L  +   Q  +++L         
Sbjct: 473 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRP 532

Query: 339 DQMKMAGISP--NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
              +M  + P     ++N L          D A   FN++      PS V +  L+ + +
Sbjct: 533 SGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIA 592

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K  +      L  +M+  GI P   T  ILI+SF     +  AF + + + K GF PDV 
Sbjct: 593 KMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVV 652

Query: 457 TYGVLIHGLC---MKG-------------------NMKEASKLFNSMWETKLEPNDVVYN 494
           TYG L++GLC    KG                     K  + L N M  +K+ PN VV++
Sbjct: 653 TYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 712

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++   CKEG    A  ++  M ++G+ P++ +Y++ +   C   +  EA  + + M+  
Sbjct: 713 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772

Query: 555 GLKPSVSLYNILYRAKNNIE 574
           G  P+V  YNIL      I+
Sbjct: 773 GCVPNVRSYNILINGYCQIQ 792



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 248/596 (41%), Gaps = 72/596 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSIS---IILRL-----LLSKMSSHSHAAAQTLILKIISGRI 78
           KA  LF   SRQ L  TP +++   +I  L     L   +S      A+  I  +++ R 
Sbjct: 308 KAMYLFEEMSRQEL--TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 79  TSSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
            S        L     L  +   SN     ++Y +I+D   ++   + A   F  +   G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           ++P   T+N ++  + K     +    FSE N+     +  ++ ++ +G     +  +  
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML----------------------- 232
           E+L ++   GFS +V   T L+     +G  +  K +                       
Sbjct: 486 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFL 545

Query: 233 -----------------------FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
                                  F ++  +    +   +T L+  + K            
Sbjct: 546 SSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLST 605

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M   G+ P +YT N LI+ +C+  ++   F +  ++       +VVTY TL+ GLCK  
Sbjct: 606 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-- 663

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
                      M   GISP++ TYN LI   C+  E      L N++ ++   P+VV ++
Sbjct: 664 -----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 712

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            ++ A  K G   +A D+V  M +RG+ P  VTYT L+D      +M++A +++  M   
Sbjct: 713 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P+V +Y +LI+G C    M +A  L   M    L  + V YN +I G C  G    A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
           + L  EM   G +P++ +Y   +  LC++    EA VLL  +    L   + +YNI
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 888



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%)

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA   FN M   +  P+ V +N ++    K  +    L L  +M+  G+ P++ + + 
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  LC   +   A   L ++LKLG +P  + +  L R 
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRG 124


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/510 (31%), Positives = 255/510 (50%), Gaps = 22/510 (4%)

Query: 29  FSLFNWASRQGL-QHTPQS-ISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           F L   AS  GL +HTP S +S+   LL  ++   +H      +L++++ R+  SS  PR
Sbjct: 103 FRLLLVASPPGLFRHTPASFLSMACHLLRHRLPHLAHP-----LLRLLASRLGRSS-PPR 156

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR--PRSNT- 143
            L   L+    +  +P +      S   A+ +  L   A       L  G+R  P S T 
Sbjct: 157 VLPLLLSAAAAAPGDPASLLSALSS---AYAEEGLLPDACTLVLLALRRGIRLEPTSCTG 213

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             S      ++C+F   +L   +     E  +  F +L++     G+L  A  V ++++ 
Sbjct: 214 LMSRFPTAPEACAF---YLQLLDAGLPPEAKL--FNVLMRDLVRLGELASAQNVFDEMQS 268

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G    VV + ++I G C+ GD++ A+ L R++ E G+    +TY  LI GL + G  +D
Sbjct: 269 RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED 328

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
               +EKM   G+ P+   +  LI  +C +G      +L  EMR R V  + VTYN ++ 
Sbjct: 329 ARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVN 388

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLC+   ++ A  ++ +M+ AG+ P+ +TY  LIDG+C   E D A  +   + + G   
Sbjct: 389 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             VTY  LI   SKAG S  A  ++ EM E G+ P   TYT++ID+F R  D++    + 
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 508

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             MQ  G  P V TY V+++G C  G MK A  L N+M    + P+D+ YN+++ G+CK 
Sbjct: 509 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           G       L    + KG VP++  Y+S +G
Sbjct: 569 GKVTDIEEL---KSAKGTVPDLGVYTSIVG 595



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 168/329 (51%)

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + GL      + VL+  L + G        +++MQ  GV  ++ ++N +I   C  G + 
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L   M    V  +V TY  LI GLC+  R+++A  + ++M   G+ PN + +  LI
Sbjct: 293 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 352

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           D  C  G+ +    L  +++  G  P  VTYN ++    +A + K AS +V EM   G+ 
Sbjct: 353 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 412

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  VTYT LID + + ++++ A E+   M   G   D  TY  LI GL   G   +A ++
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 472

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
              M E  LEP++  Y M+I  +C++G+    LRLL EM  KG  P + +Y+  +   C+
Sbjct: 473 LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCK 532

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G+   A++LLN M+ +G+ P    YNIL
Sbjct: 533 LGQMKNADMLLNAMINIGVSPDDITYNIL 561



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 109/199 (54%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A   + QL   G  P    +NVL+R   + G    A ++  EM+ RG+  + V++  +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R+ D++ A  ++  M ++G +PDVYTYG LI GLC  G +++A  +F  M    ++
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN VV+ ++I  +CK+G++   L L  EM E+G+ P+  +Y++ +  LC+      A  +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           + +M   GL+P    Y  L
Sbjct: 403 VVEMRSAGLRPDTVTYTTL 421



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 3/156 (1%)

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI     + T L+  F  + +   A   Y  +  +G  P+   + VL+  L   G +  
Sbjct: 202 RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 258

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F+ M    +    V +N MI G C+ G+   A  L   M+E G+ P++ +Y + I 
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G+  +A  +  +M   G+KP+  ++ IL  A
Sbjct: 319 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/620 (28%), Positives = 282/620 (45%), Gaps = 82/620 (13%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A + F +AS   G + T +S  +++R L+    S   + A+ L++++I  ++     
Sbjct: 92  PKTALNFFYFASDSCGFRFTLRSYCVLMRSLIV---SGFVSPARLLLIRLIDRKLPVLFG 148

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIID-------AHLKSRLSDQALFYFHQMLDSG 136
            P++    +     +  N V +S +  + +D          ++     A+  F  + + G
Sbjct: 149 DPKNRHIEIASAM-ADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG 207

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           V P   T   LL  ++K+   +K +  F   R  V  DVY F   I   C+ G +  A +
Sbjct: 208 VFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQ 267

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +   +E++G SPNVV Y +LI G CK+G+++ A     K+ + G+ AT  TY+VLI GL 
Sbjct: 268 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 327

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K     +     ++    G +P+   YN LI  YC  G + +  ++  +M  + +  N V
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGIS----------------------------- 347
           T N++I G CK  ++++AE +L++M   G S                             
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 348 ------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 PN      L+ G C  G+   A  L+ +L   G   ++VT N LI    K GN 
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L+++M ERG    ++TY  LI    +   +E+ F++   M K G  PD +TY +L
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567

Query: 462 IHGLCMKGNMKEA-----------------------------------SKLFNSMWETKL 486
           IHG+C  G + EA                                    KLF  +    L
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           E N VVYN +I  YC+ GN+  A +L  +M  KG+ P  A+YSS I  +C  G+  +A+ 
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L+++M K GL P+V  Y  L
Sbjct: 688 LIDEMRKEGLLPNVVCYTAL 707



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 220/441 (49%), Gaps = 7/441 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           SII    K    +QA     +ML  G       F +++ ++  +  F+    F  E   +
Sbjct: 391 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  +      L+ G C+ G  + A E+  +L E GF  N+V   +LI G CK G+++ A
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L +K+ E G V  + TY  LI G  K G  ++GF+   +M   G+ P  +TYN LIH 
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C  GK+ E   L++E + R++  NV TY  +I G CK  +++E E+L  ++    +  N
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + YN LI  +C  G T +AF+L + ++S G  P+  TY+ LI      G  + A  L+ 
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM + G+ P+ V YT LI  + +   M+K   +   M      P+  TY V+I G    G
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 750

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           +MK A+KL + M    + P+ V YN++  G+CKEG      ++   M+++GL  +  +Y+
Sbjct: 751 DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYT 810

Query: 530 STIGVLCQDGKWPEAEVLLNQ 550
           + +        W +   L NQ
Sbjct: 811 TLV------HGWQQPSALTNQ 825



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 224/459 (48%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+  +K    ++A     + L+ G  P    +N+L+    K  +         +  
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  +  +   +I+G C+ G + +A  +L ++   GFS N   +T++I   C N   E
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    R++    +       T L+ GL K G   D  E + ++   G   +L T N LI
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G + E  +L  +M  R    + +TYNTLI G CKE +V+E  +L  +M   GI 
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TYN LI G C  G+ D+A  L+N+ KS    P+V TY V+I  + KA   +    L
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E+  + +  + V Y  LI ++ R+ +  +AF+++  M+  G  P   TY  LIHG+C 
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M++A  L + M +  L PN V Y  +I GYCK G   + + +L EM+   + PN  +
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I    + G    A  LL++M+  G+ P    YN+L
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 777



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 216/450 (48%), Gaps = 1/450 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K      AL     M+  G+ P S T NS++    K    ++      E 
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +   ++  +F  +I   C       A   L ++      PN  + T+L+ G CK G  
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++ E G  A   T   LI GL K G  ++     +KM   G      TYN L
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EGKV EGFKL  EM  + +  +  TYN LI G+C+  ++ EA  L ++ K   +
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TY  +IDG+C A + ++  +LF +L +     + V YN LIRA+ + GN+  A  
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M  +GI P+  TY+ LI        ME A  +   M+K G  P+V  Y  LI G C
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M +   +   M    + PN + Y +MI GY K G+   A +LL EM  KG+VP+  
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +Y+      C++GK  E   + + M + GL
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 278/561 (49%), Gaps = 55/561 (9%)

Query: 13  TLNLISRMAKLPPL-KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
            L+L+ R +  PPL +  ++  W SR   +         L L         H+  ++ + 
Sbjct: 35  VLHLLLRTSPPPPLPRLVAIARW-SRAHFRAPLPLRLHALLLARLASDGSLHSLLRSELH 93

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
            + +GR+ S    P S+L    +  P+SS P+    L  ++  A        Q L  +  
Sbjct: 94  VLAAGRLHS----PASIL----RALPASSGPLVADMLVLALARA-------SQPLAAYEA 138

Query: 132 MLDSGV-----RPRSNTFNSLLIFVIKSCSFD-KGWLFFSENRCKVELDVYSFGILIKGC 185
            L +G      RP + + N+LL  ++++   D     F +  R +V  D+++F I+I G 
Sbjct: 139 FLLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGF 198

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G L KA +V   +   G +P+V  Y +LIDG CK G +   KM              
Sbjct: 199 CKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQV--GKMYH------------ 244

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                 +  L K  +Q             G+SP + T+N LI+ YC E  ++   K+F E
Sbjct: 245 ------VDALLKEMIQA------------GISPDVVTFNVLINGYCKEPNITAAIKVFQE 286

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR + +  NVVTYN+L+ GLC+E +V+++ +L+++M+  G++  + T N +++GFC  G 
Sbjct: 287 MRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGM 346

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A    + +   G  P+V+TYN L+  + + G  K A+     M  +GI+P+  TY  
Sbjct: 347 MVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNC 406

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI  F  S D      +   M++ G   DV TY VLI  LC KG +++A KL + M E  
Sbjct: 407 LITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 466

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           LEP  V YN +I G+C++G++  A  +   M ++    N+ +Y+  +   C+ GK  EA 
Sbjct: 467 LEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEAN 526

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
           V+LN+ML+ GL P+   Y I+
Sbjct: 527 VVLNEMLEKGLVPNRITYEII 547


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/564 (28%), Positives = 281/564 (49%), Gaps = 57/564 (10%)

Query: 19  RMAKLPPLK---AFSLFNWASRQ-GLQHTPQSISIILRL---LLSKMSSHSHAAAQTLIL 71
           + A L P+    A     W  +Q GL+  P  ++ IL +   +L K   + +A +   IL
Sbjct: 23  KFASLRPIHGVLALKFLKWVIKQPGLE--PNHLTHILGITTHVLVKARLYGYAKS---IL 77

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFP-SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           K ++ + + S+F    L   L   +P  SSNP     +++ +I  +L+  +   A+  F 
Sbjct: 78  KHLAQKNSGSNF----LFGVLMDTYPLCSSNPA----VFDLLIRVYLRQGMVGHAVNTFS 129

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
            ML  G +P   T N ++  ++K+C     W FF +    +V  +V SF ILI   C  G
Sbjct: 130 SMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQG 189

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L KA  +L  +E  G+ P +V Y +L+  CCK G  + A           LV   H   
Sbjct: 190 KLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFA-----------LVLIHH--- 235

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                                M+  G+   + TYN  I   C   + ++G+ +  +MR++
Sbjct: 236 ---------------------MECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N V+YNTLI G  KE ++  A R+ ++M    +SPN+ITYN LI+G+C  G  ++A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            R+ + +++N   P+ VT   L+    K+    +A +++        + + +++T++ID 
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R+  +++AF++   M K G  PD+ T+ VLI+G C  GN+ +A ++ + ++     PN
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPN 454

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           +V+++ +I+  CK GN Y A++    MN  G   +  + +S +  LC++GK  EAE  L+
Sbjct: 455 NVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 550 QMLKLGLKPSVSLYNILYRAKNNI 573
            + ++GL P+   ++ +     N+
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANV 538



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 213/444 (47%), Gaps = 4/444 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           AL   H M   G++    T+N  +  + ++    +G+L   + R K +  +  S+  LI 
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G  + G +  A  V N++ E+  SPN++ Y  LI+G C NG+ E A  +   +    +  
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRP 348

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
            + T   L+ GL+K+          E+  +N  S +  ++  +I   C  G + E F+L 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM    V  +++T++ LI G CK   + +A+ ++ ++   G  PN + ++ LI   C  
Sbjct: 409 IEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +A + +  +  NGQ+    T N L+ +  + G    A + +  +   G+ P+ VT+
Sbjct: 469 GNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +I+ +    D   AF ++  M   G  P  +TYG L+  LC   N  EA KL   +  
Sbjct: 529 DCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L  + + YN +I    K GN   A+RL  EM +  ++P+  +Y+  +  L ++G+   
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 544 AEVLLNQMLKLGLKPSVSLYNILY 567
           A + L ++++   K  ++L +I+Y
Sbjct: 649 AFIFLGRLMQ---KEILTLNSIVY 669



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 205/469 (43%), Gaps = 2/469 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S  ++ II+ +        A   F +M+  G  P   T+ SLL  + K  +F +   
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 163 FFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              +  C  + +D  S+  LI    ++G+L +A  +  ++ +    P+   YT ++ G  
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 222 KNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           + G +  A +   ++ +  ++      YT  I GLFK G  K     +++M+  G+S  L
Sbjct: 642 REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
              N +   Y   GKV     L  + R++ V  N+ T+N L+ G  +   +    +L + 
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+ +G  PN +TY+ LI G C+ G  +   ++     +   +   +T+N+LIR   +  +
Sbjct: 762 MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
                DL   ME   ++  + T   + D  VR    +  F     M K GF P    Y  
Sbjct: 822 LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           ++  +C  G+++ A KL + M    +  +D     M+ G    G    A+ +L  M    
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +P  +++++ + V C+   + EA  L   M    +K  +  YN+L  A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISA 990



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/451 (21%), Positives = 182/451 (40%), Gaps = 37/451 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y ++I    KS    +A+  F +M+ + + P S T+  +L  +I+       ++F     
Sbjct: 598  YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 169  CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  + L+   +   I G  +AG    A  +  ++EE G S +++   S+ DG  + G +
Sbjct: 658  QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
              A  L  K     ++    T+ +L+ G  +       F+ Y  M+ +G  P+  TY+ L
Sbjct: 718  FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC-------------------- 326
            I   CN G +  G K+           + +T+N LI   C                    
Sbjct: 778  ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837

Query: 327  ---------------KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                           + M  Q     + +M   G  P    Y  ++   C  G+   AF+
Sbjct: 838  SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            L +Q+ + G S        ++R  +  G  + A  +++ M      P+  T+T L+  F 
Sbjct: 898  LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + D+ ++A  +  LM+      D+  Y VLI   C  G++  A   +  + +  L PN  
Sbjct: 958  KKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMT 1017

Query: 492  VYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             Y +++     +    R   +L ++N++GLV
Sbjct: 1018 TYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
            ++A++   +ML     P ++TF +L+    K  +F +   L       +V+LD+ ++ +L
Sbjct: 928  EEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVL 987

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I  CC  GD+  A +   ++++ G  PN+  Y  L+        + R +++ + + + GL
Sbjct: 988  ISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047

Query: 242  VA 243
            V+
Sbjct: 1048 VS 1049


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 242/465 (52%), Gaps = 14/465 (3%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS--GVRPRSN-TFNSLLIFVIKSCSFD 158
           P T  R+ + I D        D +LF+F  +  S  G    +N T N LL  ++K+    
Sbjct: 34  PNTVGRVLQVIKDV-------DVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHH 86

Query: 159 KGWLFFSENRCKVELDV--YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           + +  F +       D    ++  LI G C+AGD+ +AF++L +++E G SP+VV ++S+
Sbjct: 87  QAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +   C  G++ RA   FR+  E    +    + +L+ GL K     +  +  E+M   G+
Sbjct: 147 VQALCNTGNLSRAMQYFRESVECAPDSV--LFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + TYN LI   C   ++ E  +L + M  R+V  N+VTYNTLI G CK      A +
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L+++M  +G  P+V+T+N LI GFC   + DKA  + + +K    +P++VTYNVLI    
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
            AG +  A +L+ EM+ RGI P  +TY  LI  F R+  +E+AF++ +LM + G  PD  
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           +Y  L   L       EA  L ++M++    PN   +N ++ G C       A  LL  M
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
              G  P  ++Y   +  LC+ G+  +A+ +L  M+  G++P VS
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVS 489



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 202/408 (49%), Gaps = 1/408 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K+   ++A     +M + G  P   T +S++  +  + +  +   +F E+ 
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES- 166

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            +   D   F IL+ G C+A  L++A +++ ++ E G  P+VV Y SLIDG CK+  +E 
Sbjct: 167 VECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE 226

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ L   + +  +     TY  LI G  K G      +  E+M  +G  P + T+N LI 
Sbjct: 227 ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLIS 286

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C + K+ +  ++   M+    A N+VTYN LI GLC   R  EA  LL +M   GI P
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ITYN LI  FC   + ++AF++ N +   G  P  ++Y  L  A  K+     A  L+
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M + G  P+  T+  L++    S  +++A  + ++M++ G  P   TY VL+ GLC  
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           G + +A ++   M    ++P       ++    +EG    AL    ++
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 40/288 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y ++I  + K+  +  A     +M+ SG  P   TFNSL+    +    DK         
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C   L  Y+  +LI G C+AG  N+A E+L++++  G  P+++ Y SLI   C+N  
Sbjct: 306 KGLCAPNLVTYN--VLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT--- 282
           IE+A  +   + E G++    +Y  L   L K+    + F   + M   G  P+L+T   
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 283 --------------------------------YNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
                                           Y  L+   C  G+V +  ++   M    
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
           +   V +  T++  L +E +   A    DQ+  A       +Y KL++
Sbjct: 484 IQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 236/460 (51%), Gaps = 6/460 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--C 169
           IID   K+    QAL  F +M +  V P   T+N ++  + K+    K +    E R   
Sbjct: 13  IIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGK 71

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIER 228
            V  D+ ++  +I G C+ G++++A E+L ++    G +P+VV YTS++DG C++G ++R
Sbjct: 72  SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY-EKMQLNGVSPSLYTYNCLI 287
           A  + R++   G+   + T++ LI G        +  + Y E +  +   P + TY  LI
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G + +  K+   M  R+   NVVTY++L+ GLCK   + +A  L  +M   G  
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  LI G C A + D A  L +++ +    P  V+YN L+  + + G  + A  L
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKA-FEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +EM  +   P  +TYT L+  F  +  +E+A F + ++   +G  PDV TY +++ G  
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                 EA++    M    + PN V Y+ +I G CK G    A+ +L  M  K + P++ 
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +++S IG LC+ G   EA  LL  M   GL+P +  Y  L
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 209/379 (55%), Gaps = 9/379 (2%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           M   P VV +T +IDG CK   +++A   F K+ E  +   + TY V++ GL K  L   
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK 59

Query: 264 GFEFYEKMQL-NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE-VACNVVTYNTL 321
            +E  ++M+    V+P L TY+ +I+ +C +G++    ++  EM  R+ +A +VVTY ++
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ-LKSNG 380
           + GLC++ ++  A  ++ +MK+ G+ P+  T++ LI G+C+A + D+A +L+ + L S+ 
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P VVTY  LI  F K+GN + A  ++  ME R   P+ VTY+ L+    ++ D+++A 
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           +++  M   G  P+V TY  LIHGLC    +  A  L + M  T   P+ V YN ++ GY
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM-LKLGLKPS 559
           C+ G    A +L  EM  K  +P+  +Y+  +   C   +  EA  LL  M    G+ P 
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 560 VSLYNILY----RAKNNIE 574
           V  Y+I+     RAK  +E
Sbjct: 360 VVTYSIVVAGYSRAKRFVE 378



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 230/463 (49%), Gaps = 13/463 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I+   K    D+A     +M+   G+ P   T+ S++  + +    D+      E 
Sbjct: 80  YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGD 225
           + K VE D ++F  LI G C A  +++A ++  + L    + P+VV YT+LIDG CK+G+
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGN 199

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E+A  +   +     V    TY+ L+ GL K G      + + +M   G  P++ TY  
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LIH  C   KV     L DEM       + V+YN L+ G C+  R++EA++L  +M    
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319

Query: 346 ISPNVITYNKLIDGFCDAGETDKA-FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
             P+ ITY  L+ GFC+A   ++A F L N   + G  P VVTY++++  +S+A     A
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           ++ ++EM  R + P+ VTY+ LID   ++  ++ A E+   M      P V T+  +I  
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN------- 517
           LC  G+M EA KL  +M    LEP  V Y  ++ G+ + G    A  L   M        
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSS 499

Query: 518 -EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
               LVP  A +S+ I  LC+  +  +A  ++ ++     +P+
Sbjct: 500 SAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEPA 541



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 224/459 (48%), Gaps = 12/459 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S++D   +    D+A     +M   GV P   TF++L+     +   D+    + E  
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                + DV ++  LI G C++G+L KA ++L  +E     PNVV Y+SL+ G CK GD+
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A  LFR++   G V    TYT LI GL             ++M      P   +YN L
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNAL 295

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-G 345
           +  YC  G++ E  +LF EM  +    + +TY  L+ G C   R++EA  LL+ MK A G
Sbjct: 296 LDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 355

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I P+V+TY+ ++ G+  A    +A     ++ +   +P+ VTY+ LI    KAG    A 
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM 415

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++++ M  + + PS  T+  +I +  R  DM++A+++   M   G  P + TY  L+ G 
Sbjct: 416 EVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 475

Query: 466 CMKGNMKEASKLFNSM--------WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
              G M+ A +LF  M            L P    ++ +I G CK     +A+ ++ E+ 
Sbjct: 476 SRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELR 534

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
            +   P      + +  L + G+  EA  L+N + K+GL
Sbjct: 535 SRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 220/435 (50%), Gaps = 12/435 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR----CK--VELDVYSFGILIKG 184
           +M + G+   + T N +L       +   G +  +EN     C+  V  D  SF +++  
Sbjct: 179 EMQNQGLVXSTQTLNCVL-----DVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVA 233

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           CC  G + +A + LN + E GF  +    T +ID  C+ G + R    F K+ E+GL   
Sbjct: 234 CCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPN 293

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              +T LI GL K G  K  FE  E+M   G  P++YT+  LI   C +G   + F+LF 
Sbjct: 294 VINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFL 353

Query: 305 EM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           ++ R      NV TY  +I G CKE ++  AE LL +M+  G+ PN  TY  LIDG C  
Sbjct: 354 KLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +A+ L + +   G SP++ TYN +I    K G+   A  L+ ++   G+    VTY
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           TIL+    R  D  ++   ++ M K GF+PD+++Y  LI   C +  MKE+ +LF     
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVS 533

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L P    Y  MI GYC+ GN+  A++L   M+  G  P+  +Y + I  LC++ K  +
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 544 AEVLLNQMLKLGLKP 558
           A  L + M+  GL P
Sbjct: 594 ARNLYDAMMDKGLSP 608



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 216/442 (48%), Gaps = 38/442 (8%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           IIDA  +    ++ + YF +M++ G+ P                                
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAP-------------------------------- 292

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             +V +F  LI G C+ G + +AFE+L ++   G+ PNV  +T+LIDG CK G  E+A  
Sbjct: 293 --NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 232 LFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           LF K +   G     HTYT +I G  K            +MQ  G+ P+  TY  LI  +
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G     ++L D M     + N+ TYN +I GLCK+  + EA RLL+++ + G+  + 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  L+   C   +T+++   FN++   G +P + +Y  LI  F +    K +  L  E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEE 530

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
               G+ P++ TYT +I  + R  +   A +++  M   G +PD  TYG LI GLC +  
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A  L+++M +  L P +V    + + YCK+ +S  A+ +L  + ++  +  +   ++
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NT 647

Query: 531 TIGVLCQDGKWPEAEVLLNQML 552
            +  LC +GK   A +  +++L
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLL 669



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 202/378 (53%), Gaps = 1/378 (0%)

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E G L +A  ++ +++  G   +      ++D     G +E A+ +F ++ + G+     
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           ++ +++      G   +  ++   M   G      T   +I  +C +G V+     F +M
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +A NV+ +  LI GLCK+  +++A  LL++M   G  PNV T+  LIDG C  G T
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 367 DKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           +KAFRLF +L +S+G  P+V TY  +I  + K      A  L+  M+E+G+ P+  TYT 
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID   +  +  +A+E+  LM K GFSP++YTY  +I GLC KG++ EA +L N +    
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L+ + V Y +++  +C++ ++ R+L    +M + G  P+I SY++ I   C+  +  E+E
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 546 VLLNQMLKLGLKPSVSLY 563
            L  + + LGL P+   Y
Sbjct: 526 RLFEEAVSLGLIPTKKTY 543



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 1/332 (0%)

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           IG   L         ++    +NG  K+      +MQ  G+  S  T NC++      G 
Sbjct: 145 IGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGL 204

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V     +F EM  R V+ + V++  ++   C   RV EAE+ L+ M   G   +  T   
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTL 264

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID FC  G  ++    F ++   G +P+V+ +  LI    K G+ K A +L+ EM  RG
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
             P+  T+T LID   +    EKAF ++  L++  G+ P+V+TY  +I+G C +  +  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L + M E  L PN   Y  +I G+CK GN  RA  L+  M ++G  PNI +Y++ I  
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+ G   EA  LLN++   GL+     Y IL
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 8/313 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y ++ID H K     +A      M   G  P   T+N+++  + K  S D+ + 
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             ++     ++ D  ++ IL+   C   D N++    N++ ++GF+P++  YT+LI   C
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFC 516

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +   ++ ++ LF +   LGL+ T+ TYT +ICG  + G      + +++M  +G +P   
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI   C E K+ +   L+D M  + ++   VT  TL    CK+     A  +LD++
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +       + T N L+   C  G+ D A   F++L    + P+V    V +  F      
Sbjct: 637 EKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLD--KEPNV--NRVTLLGFMNKCYE 689

Query: 402 KMASDLVREMEER 414
                LV E+ ER
Sbjct: 690 SNKYGLVSELSER 702


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 223/429 (51%), Gaps = 1/429 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P +   N+L+  +       K   F  +   +  ++D  S+GIL+ G C+ G
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A ++L  +E+    P+VV+Y+++IDG CK+  ++ A  L+ ++   G+     TYT
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LICG    G   + F    +M L  ++P++YTYN LI   C EGKV E   L   M  +
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +VV Y+ L+ G C    VQ+A+++   M   G++P+V +YN +I+G C     D+A
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEA 309

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  ++      P  VTY+ LI    K G      DL +EM  RG   + VTY  L+D 
Sbjct: 310 MNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDG 369

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++ +++KA  ++  M++ G  P+ YTY  LI GLC  G +K+   LF  +       +
Sbjct: 370 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCID 429

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y +MI G CKEG    AL +  +M + G +PN  ++   I  L +  +  +AE LL+
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLH 489

Query: 550 QMLKLGLKP 558
           +M+  GL P
Sbjct: 490 EMIAKGLLP 498



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 203/389 (52%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+KG C  G++ K+    +++   GF  + V Y  L++G CK G+   A  L R I +  
Sbjct: 86  LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS 145

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                  Y+ +I GL K+ L  + ++ Y +M   G+ P + TY  LI  +C  G++ E F
Sbjct: 146 TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAF 205

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L +EM  + +  N+ TYNTLI  LCKE +V+E++ LL  M   G+ P+V+ Y+ L+DG+
Sbjct: 206 GLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY 265

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  GE  KA ++F  +   G +P V +YN++I    K      A +L+REM  + + P  
Sbjct: 266 CLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY+ LID   +   +    ++   M   G   ++ TY  L+ GLC   N+ +A  LF  
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  ++PN   Y  +I G CK G   +   L   +  KG   ++ +Y+  I  LC++G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + EA  + ++M   G  P+   + I+ R+
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRS 474



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 194/393 (49%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +  ILI   C  G +  +F VL ++ ++G+ PN +I  +L+ G C  G+++++    
Sbjct: 44  DLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFH 103

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+   G    Q +Y +L+ GL K G  +   +    ++     P +  Y+ +I   C +
Sbjct: 104 DKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKD 163

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V E + L+ EM  R +  +V+TY TLICG C   ++ EA  LL++M +  I+PN+ TY
Sbjct: 164 KLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY 223

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LID  C  G+  ++  L   +   G  P VV Y++L+  +   G  + A  +   M +
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P   +Y I+I+   +   +++A  +   M      PD  TY  LI GLC  G +  
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
              L   M       N V YN ++ G CK  N  +A+ L  +M E+G+ PN  +Y++ I 
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+ G+  + + L   +L  G    V  Y ++
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM 436



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 174/347 (50%), Gaps = 1/347 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K +L D+A   + +M   G+ P   T+ +L+     +    + +   +E 
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  ++Y++  LI   C+ G + ++  +L  + + G  P+VVIY+ L+DG C  G++
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++AK +F  + + G+    ++Y ++I GL K     +      +M    + P   TY+ L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G+++    L  EM HR    N+VTYN+L+ GLCK   + +A  L  +MK  GI
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TY  LIDG C  G   K   LF  L   G    V TY V+I    K G    A  
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           +  +ME+ G  P+ VT+ I+I S +  D+ +KA ++   M   G  P
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 165/327 (50%)

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+V    T ++LI      G     F    K+   G  P+    N L+   C +G+V + 
Sbjct: 40  GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
               D++  +    + V+Y  L+ GLCK    + A +LL  ++     P+V+ Y+ +IDG
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C     D+A+ L++++ + G  P V+TY  LI  F  AG    A  L+ EM  + I P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TY  LID+  +   ++++  + ++M K G  PDV  Y +L+ G C+ G +++A ++F 
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +T + P+   YN++I G CK      A+ LL EM  K ++P+  +YSS I  LC+ G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +      L  +M   G   ++  YN L
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSL 366


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 260/577 (45%), Gaps = 63/577 (10%)

Query: 27  KAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTP 85
           KA   F+W + Q G +H+  + + +L   + K  +     A  L      G  +  S T 
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQE---AYDLFKNHRCGLCSPDSIT- 169

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                                  Y ++I+   K+R   QA     +M   G+ P +  +N
Sbjct: 170 -----------------------YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 206

Query: 146 SLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           +++  +  +   D   + + + +      V ++ IL+   C++  ++ A  +L  + E G
Sbjct: 207 TIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG----------- 254
            +PNVV Y +LI+G CK G+++ A +LF ++ E        TY +LI G           
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 255 ------------------------LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                   L K+G   D F   + M      PS +T+N +I  +
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G++   ++LF  M  R    ++ TYN +I G C+  R+ +A +LL++M  AG  P+V
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN ++ G C A + D+A+ ++  L++ G    VVT + LI    K+     A  L+RE
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ME  G  P  V YTILI  F ++D ++K+   +S M   G  P V TY ++I  LC    
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++   L  +M E  + P+ +VY  +I G CK  +   A  L   M + G  P + +Y+ 
Sbjct: 567 VRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            +  LC+  +  EA  LL  M   G  P    YN ++
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 247/494 (50%), Gaps = 44/494 (8%)

Query: 109 YESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           Y  ++DA  KS R+SD +L     M+++G  P   T+N+L+    K  + D+  + F+  
Sbjct: 239 YTILVDALCKSARISDASLI-LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG----- 219
            EN C    DV+++ ILI G C+        ++L ++ + G  PN + Y +L+D      
Sbjct: 298 LENSCSP--DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355

Query: 220 ----------------C--------------CKNGDIERAKMLFRKIGELGLVATQHTYT 249
                           C              CK G ++ A  LF+ + + G +   +TY 
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 415

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           ++I G  +     D  +  E+M   G  P + TYN ++   C   +V E +++++ +R+ 
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 475

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +VVT +TLI GLCK  R+ +AE+LL +M+  G +P+V+ Y  LI GFC A + DK+
Sbjct: 476 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 535

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
              F+++   G  P+V+TY+++I    K+   +    L++ M ERG+TP  + YT +ID 
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +SD  ++A+E+Y LM+++G +P V TY VL+  LC    + EA  L   M      P+
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN +  G+ K     +A RL   M  +G  P    YS  +  L  + K  +A  +  
Sbjct: 656 TVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715

Query: 550 QMLKLG--LKPSVS 561
           + L+ G  + P +S
Sbjct: 716 EALEAGADVDPEIS 729


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 238/495 (48%), Gaps = 36/495 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID+  K R   +A   F +M   G+RP   T++ L+    +    D    F  E 
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++L VY +  LI G C+ GD++ A   + ++      P VV YTSL+ G C  G I
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  L+ ++   G+  + +T+T L+ GLF+ GL +D  + + +M    V P+  TYN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC EG +S+ F+   EM  + +  +  +Y  LI GLC   +  EA+  +D +     
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             N I Y  L+ GFC  G+ ++A  +  ++   G    +V Y VLI    K  + K+   
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L++EM +RG+ P +V YT +ID+  ++ D ++AF ++ LM   G  P+  TY  +I+GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 467 MKGNMKEASKLFNSMWETKLEPNDV----------------------------------- 491
             G + EA  L + M      PN V                                   
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YNM+I G+C++G    A  L+  M   G+ P+  +Y++ I  LC+     +A  L N M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848

Query: 552 LKLGLKPSVSLYNIL 566
            + G++P    YN L
Sbjct: 849 TEKGIRPDRVAYNTL 863



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 224/447 (50%), Gaps = 2/447 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++ +I  +++SR     +  F  M+    + P   T ++LL  ++K   F      F++ 
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  DVY +  +I+  CE  DL++A E++  +E  G   N+V Y  LIDG CK   +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  + + +    L     TY  L+ GL K    + G E  ++M     SPS    + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +      GK+ E   L   +    V+ N+  YN LI  LCK  +  EAE L D+M   G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY+ LID FC  G+ D A     ++   G   SV  YN LI    K G+   A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            + EM  + + P+ VTYT L+  +     + KA  +Y  M   G +P +YT+  L+ GL 
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +++A KLFN M E  ++PN V YN+MI GYC+EG+  +A   L EM EKG+VP+  
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           SY   I  LC  G+  EA+V ++ + K
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 205/403 (50%), Gaps = 10/403 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  L+ G C+  +     E+++++  + FSP+    +SL++G  K G IE A  L 
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++ + G+      Y  LI  L K     +    +++M   G+ P+  TY+ LI  +C  
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+        EM    +  +V  YN+LI G CK   +  AE  + +M    + P V+TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G+C  G+ +KA RL++++   G +PS+ T+  L+    +AG  + A  L  EM E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             + P+ VTY ++I+ +    DM KAFE    M + G  PD Y+Y  LIHGLC+ G   E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A    + + +   E N++ Y  ++ G+C+EG    AL +  EM ++G+  ++  Y    G
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY----G 651

Query: 534 VLCQDGKWPEAEV-----LLNQMLKLGLKPSVSLYNILYRAKN 571
           VL  DG     +      LL +M   GLKP   +Y  +  AK+
Sbjct: 652 VLI-DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 232/491 (47%), Gaps = 36/491 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K +   +A+     +    ++P   T+ +L+  + K   F+ G     E  
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C +      +   L++G  + G + +A  ++ ++ + G SPN+ +Y +LID  CK     
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A++LF ++G++GL     TY++LI    + G       F  +M   G+  S+Y YN LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G +S       EM ++++   VVTY +L+ G C + ++ +A RL  +M   GI+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ T+  L+ G   AG    A +LFN++      P+ VTYNV+I  + + G+   A + 
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 408 VREMEERGITP-----------------------------------SEVTYTILIDSFVR 432
           ++EM E+GI P                                   +E+ YT L+  F R
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +E+A  +   M + G   D+  YGVLI G     + K    L   M +  L+P+DV+
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  MI    K G+   A  +   M  +G VPN  +Y++ I  LC+ G   EAEVL ++M 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744

Query: 553 KLGLKPSVSLY 563
            +   P+   Y
Sbjct: 745 PVSSVPNQVTY 755



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 40/420 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++  +      ++AL  +H+M   G+ P   TF +LL  + ++         F+E  
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP------------------- 208
              V+ +  ++ ++I+G CE GD++KAFE L ++ E G  P                   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 209 ----------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                           N + YT L+ G C+ G +E A  + +++ + G+      Y VLI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K+  +K  F   ++M   G+ P    Y  +I      G   E F ++D M +    
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD--KAF 370
            N VTY  +I GLCK   V EAE L  +M+     PN +TY   +D     GE D  KA 
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAV 773

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L N +   G   +  TYN+LIR F + G  + AS+L+  M   G++P  +TYT +I+  
Sbjct: 774 ELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R +D++KA E+++ M + G  PD   Y  LIHG C+ G M +A++L N M    L PN+
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 2/299 (0%)

Query: 270 KMQLNGVS--PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           KM +  VS  P + T + L+H            +LF++M    +  +V  Y  +I  LC+
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              +  A+ ++  M+  G   N++ YN LIDG C   +  +A  +   L      P VVT
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  L+    K    ++  +++ EM     +PSE   + L++   +   +E+A  +   + 
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G SP+++ Y  LI  LC      EA  LF+ M +  L PNDV Y+++I  +C+ G   
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AL  LGEM + GL  ++  Y+S I   C+ G    AE  + +M+   L+P+V  Y  L
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 4/254 (1%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+LD+  +G+LI G  +  D    F +L ++ + G  P+ VIYTS+ID   K GD + A 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            ++  +   G V  + TYT +I GL K G   +      KMQ     P+  TY C + + 
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DI 761

Query: 291 CNEGKVS--EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             +G+V   +  +L + +    +A N  TYN LI G C++ R++EA  L+ +M   G+SP
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + ITY  +I+  C   +  KA  L+N +   G  P  V YN LI     AG    A++L 
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880

Query: 409 REMEERGITPSEVT 422
            EM  +G+ P+  T
Sbjct: 881 NEMLRQGLIPNNKT 894



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 56/253 (22%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+IDA  K+    +A   +  M++ G  P   T+ +++  + K+     G++  +E 
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA-----GFVNEAEV 738

Query: 168 RCKVELDVYS----------FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            C     V S            IL KG     D+ KA E+ N + + G   N   Y  LI
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKG---EVDMQKAVELHNAILK-GLLANTATYNMLI 794

Query: 218 DGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            G C+ G IE A +++ R IG+                                    GV
Sbjct: 795 RGFCRQGRIEEASELITRMIGD------------------------------------GV 818

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP   TY  +I+E C    V +  +L++ M  + +  + V YNTLI G C    + +A  
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878

Query: 337 LLDQMKMAGISPN 349
           L ++M   G+ PN
Sbjct: 879 LRNEMLRQGLIPN 891


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 174/620 (28%), Positives = 282/620 (45%), Gaps = 82/620 (13%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A + F +AS   G + T +S  +++R L+    S   + A+ L++++I  ++     
Sbjct: 159 PKTALNFFYFASDSCGFRFTLRSYCVLMRSLIV---SGFVSPARLLLIRLIDRKLPVLFG 215

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIID-------AHLKSRLSDQALFYFHQMLDSG 136
            P++    +     +  N V +S +  + +D          ++     A+  F  + + G
Sbjct: 216 DPKNRHIEIASAM-ADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG 274

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           V P   T   LL  ++K+   +K +  F   R  V  DVY F   I   C+ G +  A +
Sbjct: 275 VFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQ 334

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +   +E++G SPNVV Y +LI G CK+G+++ A     K+ + G+ AT  TY+VLI GL 
Sbjct: 335 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 394

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K     +     ++    G +P+   YN LI  YC  G + +  ++  +M  + +  N V
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGIS----------------------------- 347
           T N++I G CK  ++++AE +L++M   G S                             
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514

Query: 348 ------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 PN      L+ G C  G+   A  L+ +L   G   ++VT N LI    K GN 
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L+++M ERG    ++TY  LI    +   +E+ F++   M K G  PD +TY +L
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634

Query: 462 IHGLCMKGNMKEA-----------------------------------SKLFNSMWETKL 486
           IHG+C  G + EA                                    KLF  +    L
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           E N VVYN +I  YC+ GN+  A +L  +M  KG+ P  A+YSS I  +C  G+  +A+ 
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L+++M K GL P+V  Y  L
Sbjct: 755 LIDEMRKEGLLPNVVCYTAL 774



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 227/467 (48%), Gaps = 17/467 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+  +K    ++A     + L+ G  P    +N+L+    K  +          + 
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG--------DA 437

Query: 169 CKVELDVYSFGI---------LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            ++  D+ S GI         +I+G C+ G + +A  +L ++   GFS N   +T++I  
Sbjct: 438 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 497

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C N   E A    R++    +       T L+ GL K G   D  E + ++   G   +
Sbjct: 498 LCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 557

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           L T N LIH  C  G + E  +L  +M  R    + +TYNTLI G CKE +V+E  +L  
Sbjct: 558 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 617

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   GI P+  TYN LI G C  G+ D+A  L+N+ KS    P+V TY V+I  + KA 
Sbjct: 618 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 677

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             +    L  E+  + +  + V Y  LI ++ R+ +  +AF+++  M+  G  P   TY 
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LIHG+C  G M++A  L + M +  L PN V Y  +I GYCK G   + + +L EM+  
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + PN  +Y+  I    + G    A  LL++M+  G+ P    YN+L
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/441 (32%), Positives = 213/441 (48%), Gaps = 1/441 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K      AL     M+  G+ P S T NS++    K    ++      E 
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +   ++  +F  +I   C       A   L ++      PN  + T+L+ G CK G  
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++ E G  A   T   LI GL K G  ++     +KM   G      TYN L
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EGKV EGFKL  EM  + +  +  TYN LI G+C+  ++ EA  L ++ K   +
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TY  +IDG+C A + ++  +LF +L +     + V YN LIRA+ + GN+  A  
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M  +GI P+  TY+ LI        ME A  +   M+K G  P+V  Y  LI G C
Sbjct: 720 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 779

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M +   +   M    + PN + Y +MI GY K G+   A +LL EM  KG+VP+  
Sbjct: 780 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 839

Query: 527 SYSSTIGVLCQDGKWPEAEVL 547
           +Y+      C++GK  E ++L
Sbjct: 840 TYNVLTNGFCKEGKIEEGKLL 860



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 1/219 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A+  +++     + P   T+  ++    K+   ++G   F+E   + +EL+   +  L
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I+  C  G+  +AF++ + +   G  P    Y+SLI G C  G +E AK L  ++ + GL
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +     YT LI G  K G         ++M    + P+  TY  +I  Y   G +    K
Sbjct: 765 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           L  EM  + +  + VTYN L  G CKE +++E + L + 
Sbjct: 825 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID + K+   ++    F ++L   +   S  +N+L+    ++ +  + +    + R
Sbjct: 666 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 725

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +     ++  LI G C  G +  A  +++++ + G  PNVV YT+LI G CK G ++
Sbjct: 726 SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMD 785

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +   + +++    +   + TYTV+I G  K+G  K   +   +M   G+ P   TYN L 
Sbjct: 786 KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 845

Query: 288 HEYCNEGKVSEGFKLFDE 305
           + +C EGK+ EG KL  E
Sbjct: 846 NGFCKEGKIEEG-KLLAE 862


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 233/429 (54%), Gaps = 1/429 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F ++L  G  P + TF  L+  +       K   F  +   +  +LD  S+G LI G C 
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G+   A ++L +++     PNVV+Y+++ID  CK+  +  A  L+ ++    +     T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ LI G    G  K   + + +M  + ++P++YT++ LI  +C EGKV E   +   M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  +VVTYN+L+ G C   +V +A+ L + M   G++P+V +Y+ +I+GFC     D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A +LF ++      P+VVTYN L+    K+G +  A +LV EM +RG   + +TY  ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +++ ++KA  + + +++ G  PD++TY VLI+GLC  G + +A K+F  +      
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN   Y  +I G+C +G     L +L +M + G +PN  +Y   I  L +  +  +AE L
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535

Query: 548 LNQMLKLGL 556
           L +M+  GL
Sbjct: 536 LREMIARGL 544



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 209/389 (53%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG ++    +A     A  +  Q+E  G  P+ +    L++   + G I+ +  +F KI 
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G      T+T+LI GL   G       F++K+   G      +Y  LI+  C  G+  
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
              +L   +  + V  NVV Y+T+I  +CK+  V +A  L  +M    ISP+V+TY+ LI
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GFC  G+   A  LFN++ S+  +P+V T+++LI  F K G  + A +++  M ++ + 
Sbjct: 241 SGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVK 300

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
              VTY  L+D +     + KA  ++++M + G +PDV++Y ++I+G C    + EA KL
Sbjct: 301 LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M   ++ PN V YN ++ G CK G +  AL L+ EM+++G   NI +Y+S +  +C+
Sbjct: 361 FEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK 420

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +    +A VLL ++ + G++P +  Y +L
Sbjct: 421 NNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 224/467 (47%), Gaps = 34/467 (7%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +NP+  +  +  I+ + LK++    AL    QM  +G++P   T N L+     +C    
Sbjct: 52  NNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLM-----NCFSQL 106

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           G + FS                             F V  ++ + G+ P+ V +T LI G
Sbjct: 107 GHIKFS-----------------------------FSVFAKILKKGYHPDAVTFTILIKG 137

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C  G++ +A     K+   G    Q +Y  LI GL + G  K   +   ++    V P+
Sbjct: 138 LCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPN 197

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +  Y+ +I   C +  V++ F L+ EM  + ++ +VVTY++LI G C   +++ A  L +
Sbjct: 198 VVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFN 257

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M    I+PNV T++ LIDGFC  G+  +A  +   +        VVTYN L+  +    
Sbjct: 258 RMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVK 317

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  L   M +RG+TP   +Y+I+I+ F +   +++A +++  M      P+V TY 
Sbjct: 318 QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYN 377

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ GLC  G    A +L + M +     N + YN ++   CK  +  +A+ LL ++ EK
Sbjct: 378 SLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK 437

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+ P+I +Y+  I  LC+ G+  +A+ +   +L  G  P++  Y  L
Sbjct: 438 GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 372 LFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           LFN+L   N   P  + +  ++ +  KA   + A  L ++ME  GI P  +T  +L++ F
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   ++ +F +++ + K G+ PD  T+ +LI GLC+KG + +A    + +     + + 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V Y  +I G C+ G +  A++LL  ++ K + PN+  YS+ I  +C+D    +A  L  +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 551 MLKLGLKPSVSLYNIL 566
           M+   + P V  Y+ L
Sbjct: 224 MVSKRISPDVVTYSSL 239


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 253/533 (47%), Gaps = 71/533 (13%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFS 165
           ++ + +I  + K  + +Q L  F +M+ S + P     N +L I   K        ++ +
Sbjct: 165 KILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT 224

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                ++  + ++  L+   C+ G + +  ++L++++  G +PN V Y  LI+G  K G+
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN- 284
            E+AK L  ++ + GL  + +TY  LI G F  G+  +     E+M L G SP++ TYN 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 285 ----------------------------------CLIHEYCNEGKVSEGFKLFDEMRHRE 310
                                              LI+ YC  G + + F LFDE+R   
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG------ 364
           +   +VTYNTL+ GLC++  ++ A++L  +M   GI+P+++TY  L++G C  G      
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 365 -----------------------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                                        +T +AF L  ++ + G  P ++ YNV++   
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K GN + AS+L+++M   G+ P  VTYT +I + + +  + K  E++  M   G +P V
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY VLIHG   KG ++ A   F+ M E  + PN + YN +I G CK     +A     E
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           M EKG+ PN  SY+  I   C  G W EA  L  QML  G++P    ++ L +
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 214/433 (49%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+   K    +QA     +ML +G++  + T+N L+          +      E  
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K     V ++   I G C+ G ++ A + L+ +      P+VV Y +LI G C+ G++ 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A +LF ++  + L  T  TY  L+ GL + G  +   +   +M   G++P + TY  L+
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G +S   + FDEM H  +  +   Y T I G  K      A  L ++M   G  
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++I YN ++DG C  G  ++A  L  ++ S+G  P  VTY  +I A  + G  +   ++
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G+TPS VTYT+LI        +E+AF  +S MQ+ G  P+V TY  LI+GLC 
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M +A   F  M E  + PN   Y ++I   C  GN   AL L  +M ++G+ P+  +
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691

Query: 528 YSSTIGVLCQDGK 540
           +S+ +  L +D K
Sbjct: 692 HSALLKQLGKDCK 704



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +I    E G L K  E+  ++   G +P+VV YT LI G    G +ERA + F
Sbjct: 548 DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYF 607

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ E G++    TY  LI GL K       + F+ +M   G+ P+ Y+Y  LI+E CN 
Sbjct: 608 SEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           G   E   L+ +M  R V  +  T++ L+  L K+ ++Q
Sbjct: 668 GNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 228/430 (53%), Gaps = 2/430 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           F QMLD+G+ P    +N L+    K    D+    + E     +E  +Y++  L+   C+
Sbjct: 31  FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCK 90

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQH 246
              + +A E+   + E GF P+VV Y+++I G CK G +  A +MLF K+ E G  A   
Sbjct: 91  ETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV 150

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  LI GL K+   +  ++  E+M   G  P   TYN ++   C  GKVSE  + FD M
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R  + +VV YN L+  L KE +  EA +L   +   G  P+ +TYN ++ G       
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  +F ++ ++G +P+  TY++++    +A     A  ++ EM + G  P  VTY IL
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +D   +++ ++KA E++S M  +G +PD+ +Y V+++GLC    + +A  LF+ M E KL
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ V +N+++ G CK G    A  LL +M   G  P+  +Y++ +  L + G+  +A+ 
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450

Query: 547 LLNQMLKLGL 556
           L   M + G 
Sbjct: 451 LTQAMKEKGF 460



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 222/430 (51%), Gaps = 2/430 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   TF  +L    K      G+  F +     +  D   + ILI G  + G +++A  +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
             ++  +G  P++  Y SL++  CK   ++ A  LF+ + E G      TY+ +I GL K
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 258 NGLQKDGFE-FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
            G   +  E  + KM   G S +   YN LI+  C +  +   +KL +EM  +    + +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYNT++ GLC+  +V EA++  D M   G SP+V+ YN L+D     G+TD+A +LF  +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            + G  P  VTYN ++   ++  N   A ++ ++M   G  P+  TY+I++    R+  +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A ++   M K G  PDV TY +L+ GLC    + +A +LF++M +    P+ V Y+++
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G CK    + A  L   M E+ LVP++ +++  +  LC+ GK  EA+ LL+QM   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 557 KPSVSLYNIL 566
            P    YN L
Sbjct: 426 APDYVAYNTL 435



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 217/418 (51%), Gaps = 2/418 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +ID + K    D+A   + +M+  G+ P   T+NSLL    K     +   LF +  
Sbjct: 46  YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               E DV ++  +I G C+ G + +A E+L +++ E G S N V Y +LI+G CK+ +I
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERA  L  ++   G V    TY  ++ GL + G   +  +F++ M   G SP +  YN L
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +     EGK  E  KLF ++  +    + VTYN+++ GL ++  + EAE +  +M  +G 
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY+ ++ G C A + D A ++  ++   G  P VVTYN+L+    K      A +
Sbjct: 286 APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M + G  P  V+Y+++++   +++ +  A  ++  M +    PDV T+ +L+ GLC
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 405

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
             G + EA  L + M  +   P+ V YN ++ G  K+G   +A RL   M EKG + +
Sbjct: 406 KAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 195/396 (49%), Gaps = 36/396 (9%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           SPN   +  ++   CK G +     LF ++ + G+      Y +LI G  K G   +   
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            YE+M   G+ PS+YTYN L++ +C E K+ E  +LF  M  +    +VVTY+T+I GLC
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 327 KEMRVQEA---------ER---------------------------LLDQMKMAGISPNV 350
           K  +V EA         ER                           LL++M   G  P+ 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITYN ++ G C  G+  +A + F+ + S G SP VV YN L+ A  K G +  A  L ++
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G  P  VTY  ++    R  +M++A EM+  M  SG +P+  TY +++ G C    
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A K+   M +    P+ V YN+++ G CK     +A  L   M + G  P+I SYS 
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  LC+  K  +A VL ++M++  L P V  +NIL
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 400



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 2/350 (0%)

Query: 109 YESIIDAHLKSRLSDQAL-FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +II    K+    +AL   FH+M++ G    +  +N+L+  + K  + ++ +    E 
Sbjct: 116 YSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  + D  ++  ++ G C  G +++A +  + +   G+SP+VV Y  L+D   K G  
Sbjct: 176 ASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  LF+ +   G +    TY  ++ GL +     +  E ++KM  +G +P+  TY+ +
Sbjct: 236 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIV 295

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  +C   KV +  K+ +EM       +VVTYN L+ GLCK   V +A  L   M   G 
Sbjct: 296 LSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 355

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++++Y+ +++G C   +   A  LF+++      P VVT+N+L+    KAG    A D
Sbjct: 356 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           L+ +M   G  P  V Y  L++   +     +A  +   M++ GF  D +
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 1/228 (0%)

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           M   SPN  T+  ++  FC  G+    ++LF Q+  NG SP  + YN+LI  ++K G   
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A+ L  EM   G+ PS  TY  L+++F +   M++A E++  M + GF PDV TY  +I
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 463 HGLCMKGNMKEA-SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
            GLC  G + EA   LF+ M E     N V YN +I G CK+ N  RA +LL EM  KG 
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           VP+  +Y++ +  LC+ GK  EA+   + M   G  P V  YN L  A
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA 228



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 1/257 (0%)

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           RE + N  T+  ++   CK+ ++++  +L +QM   GISP+ I YN LIDG+   G  D+
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RL+ ++ S G  PS+ TYN L+ AF K    K A +L + M E+G  P  VTY+ +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 429 SFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
              ++  + +A EM +  M + G S +   Y  LI+GLC   N++ A KL   M      
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+++ YN ++ G C+ G    A +    M  +G  P++ +Y+  +  L ++GK  EA  L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 548 LNQMLKLGLKPSVSLYN 564
              ++  G  P    YN
Sbjct: 242 FKDVIAKGYMPDTVTYN 258


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 204/391 (52%), Gaps = 3/391 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+     LI+G C  G   KA  V+  LE+ G  P+V+ Y  LI G CK+G+I+ A    
Sbjct: 148 DIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---L 204

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + +  + +     TY  ++  L  +G  K   E  ++       P + TY  LI   C E
Sbjct: 205 QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKE 264

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KL DEMR++    +VVTYN LI G+CKE R+ EA + L+ M   G  PNVIT+
Sbjct: 265 SGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 324

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A +L + +   G SPSVVT+N+LI    + G    A D++ +M  
Sbjct: 325 NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G TP+ ++Y  L+  F +   M++A E   +M   G  PD+ TY  L+  LC  G +  
Sbjct: 385 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G + RA++LL EM  KGL P+I +YSS + 
Sbjct: 445 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 504

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L ++GK  EA    + +  LG++P+   YN
Sbjct: 505 GLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 227/446 (50%), Gaps = 2/446 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    +   + +A +    +  SG  P   T+N L+    KS   D        +R  
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVL--DRMN 211

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV ++  +++  C++G L +A EVL++  +    P+V+ YT LI+  CK   + +A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++   G      TY VLI G+ K G   +  +F   M   G  P++ T+N ++   
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+  +  KL  +M  +  + +VVT+N LI  LC++  +  A  +L++M M G +PN 
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+ GFC   + D+A    + + S G  P +VTYN L+ A  K G   +A +++ +
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G +P  +TY  +ID   +    E+A ++   M++ G  PD+ TY  L+ GL  +G 
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA K F+ +    + PN + YN ++ G CK   + RA+  L  M  K   P  A+Y+ 
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            I  +  +G   EA  LLN++   GL
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 4/415 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I  + KS   D AL    +M    V P   T+N++L  +  S    +         
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 243

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    DV ++ ILI+  C+   + +A ++L+++   G  P+VV Y  LI+G CK G ++
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G      T+ +++  +   G   D  +    M   G SPS+ T+N LI
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +G +     + ++M       N ++YN L+ G CKE ++  A   LD M   G  
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 423

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN L+   C  G+ D A  + NQL S G SP ++TYN +I   SK G ++ A  L
Sbjct: 424 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 483

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G+ P  +TY+ L+    R   +++A + +  ++  G  P+  TY  ++ GLC 
Sbjct: 484 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 543

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
                 A      M   + +P +  Y ++I G   EG +  AL LL E+  +GLV
Sbjct: 544 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 164/347 (47%), Gaps = 38/347 (10%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L +NG  +DGF+F E M   G  P +     LI  +C  GK  +   + + +       +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE--------- 365
           V+TYN LI G CK   +  A ++LD+M +A   P+V+TYN ++   CD+G+         
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 366 --------------------------TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
                                       +A +L +++++ G  P VVTYNVLI    K G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A   +  M   G  P+ +T+ I++ S   +     A ++ S M + G SP V T+ 
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +LI+ LC +G +  A  +   M      PN + YN ++ G+CKE    RA+  L  M  +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G  P+I +Y++ +  LC+DGK   A  +LNQ+   G  P +  YN +
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 245/462 (53%), Gaps = 2/462 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y  +I+A  K   S  AL    +M D G  P    F  ++   +K     +      
Sbjct: 259 ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKG 318

Query: 166 EN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   C   ++V     L+KG C+ GDL+ A E+ +++ E G  PN V Y  +I+ CCKNG
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           ++++A  ++ ++    +  T      LI G  K    ++  + +++    G++ +++TYN
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYN 437

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+   C EGK+SE   ++++M  + V  +VV+YN +I G C++  +  A  +  +M   
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ PN+ITY+ L+DG+   G+T+ AF L+++++    +PS  T N++I    KAG +  +
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            D ++++ + G  P+ +TY  +ID FV+   +  A  +Y+ M K G SP+V+TY  LI+G
Sbjct: 558 QDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLING 617

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C   NM  A K+ + M    +E +  VY  +I G+C++G+   A +LL E+ E GL PN
Sbjct: 618 FCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPN 677

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              YSS I    +      A  L  +M+  G+   + +Y  L
Sbjct: 678 KVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTL 719



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/430 (34%), Positives = 224/430 (52%), Gaps = 2/430 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           S+I  +LK+R  ++A   F + +  G+     T+NSLL ++ K     +    + +  R 
Sbjct: 404 SLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRK 462

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V   V S+  +I G C+ GD++ A  V  ++ E G  PN++ Y+ L+DG  K GD E A
Sbjct: 463 GVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYA 522

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L+ ++    +  +  T  ++I GL K G   +  +  +K+   G  P+  TYNC+I  
Sbjct: 523 FGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDG 582

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +  EG V+    ++ EM    V+ NV TY  LI G CK   +  A +++D+MK  GI  +
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V  Y  LIDGFC  G+   A +L ++L+  G SP+ V Y+ +I  F K  N + A  L +
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHK 702

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M   GI      YT LI   ++   +  A E+Y+ M   G  PD+ TY VLIHGLC KG
Sbjct: 703 RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++ A K+   M    + P   +YN +I G+ KEGN   A RL  EM +KGLVP+  +Y 
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822

Query: 530 STIGVLCQDG 539
             +    +DG
Sbjct: 823 ILVNGKVKDG 832



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 242/462 (52%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  II+   K+   D+A   ++QM +  + P     NSL+   +K+ S ++    F E  
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                +V+++  L+   C+ G +++A  +  ++   G  P+VV Y ++I G C+ GD++ 
Sbjct: 427 ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDS 486

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F ++ E GL     TY+VL+ G FK G  +  F  Y++M+   ++PS +T N +I+
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G+ SE      ++         +TYN +I G  KE  V  A  +  +M   G+SP
Sbjct: 547 GLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSP 606

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TY  LI+GFC +   D A ++ +++K+ G    V  Y  LI  F + G+   AS L+
Sbjct: 607 NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLL 666

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            E++E G++P++V Y+ +I  F +  +ME A  ++  M   G   D+  Y  LI GL  +
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKE 726

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +  AS+L+  M    + P+ + Y+++I G C +G    A ++L +M+ K + P +  Y
Sbjct: 727 GKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIY 786

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           ++ I    ++G   EA  L N+ML  GL P  + Y+IL   K
Sbjct: 787 NTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGK 828



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 191/406 (47%), Gaps = 3/406 (0%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L  S  R   E D   F  L+    +   +N A +  N L E    P + +    +    
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           KN  I  A+ ++ K+   G+     T +V+I    + G  ++   ++ + +  GV     
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC-KEMRVQEAERLLDQ 340
            Y+ +I   C +        L  EMR +    + V + T + G+C K+ ++ EA ++  +
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIF-TRVIGVCMKQGKMLEAVKVKGE 319

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G   NV+    L+ G+C  G+ D A  LF+++  NG  P+ VTY V+I    K GN
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A ++  +M+ + I+P+      LI  ++++   E+A +++      G + +V+TY  
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNS 438

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+  LC +G M EA  ++  M    + P+ V YN MI G+C++G+   A  +  EM EKG
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L PN+ +YS  +    + G    A  L ++M    + PS    NI+
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 2/270 (0%)

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L +  R  +   +   +N L+    K  R+ +A    + +    I P +   N  +   
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSEL 199

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
                  +A  ++N++ S G      T +V+IRA  + G  + A    RE + +G+    
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK-GNMKEASKLFN 479
             Y+I+I++  +  D   A  +   M+  G+ P    +  +I G+CMK G M EA K+  
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKG 318

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M       N VV   ++ GYCK+G+   AL L  +MNE G+ PN  +Y+  I   C++G
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              +A  + NQM    + P+V   N L R 
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRG 408


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 244/505 (48%), Gaps = 25/505 (4%)

Query: 86  RSLLCHLTQ--LFP----------SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           RSLL H ++  L P            + P      Y ++I A  +      A  Y   M+
Sbjct: 97  RSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMV 156

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-----DVYSFGILIKGCCEA 188
            SG RP + TFNSL++   ++   +     F    CK+       D  S+  LI+G CEA
Sbjct: 157 RSGWRPDAFTFNSLILGYCRTQQLEVAHDLF----CKMPFRGFSQDAVSYAALIEGFCEA 212

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G +++A E+  ++ +    P++  + +L+ G C  G  E    + +K+ ELG   T   Y
Sbjct: 213 GRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAY 268

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             L+    +    ++  +   +M  +G+ P + T   +++ YC EG++S   ++F+ MR 
Sbjct: 269 AALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRF 328

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           +    NV TYN ++ G C   +V +A  LLDQM+  G+ P+V+TYN LI G C  G    
Sbjct: 329 KGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGS 388

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AFRL   ++ NG +    TYNVLI A  K G    A  L   +E RGI P+ VT+  +I+
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              ++   + A      M  +G++PD YTY   I  LC     +E     + M +  ++P
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V Y ++I     E N   A R+ G+M  +G  P++ +Y++++   C +G+  EAE ++
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVV 568

Query: 549 NQMLKLGLKPSVSLYNILYRAKNNI 573
            +M K         YN L     +I
Sbjct: 569 TEMKKCRTIVDAMAYNTLIDGHTSI 593



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 217/509 (42%), Gaps = 54/509 (10%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           LC L ++      P T  R Y +++D   + + +++A    ++M DSG+ P   T   ++
Sbjct: 250 LCMLQKMKELGWRPTT--RAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVV 307

Query: 149 IFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
               +          F   R K  E +V+++  +++G C AG + KA  +L+Q+ E G  
Sbjct: 308 NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+VV Y  LI G C +G I  A  L R +   GL A Q+TY VLI  L K G   +    
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           ++ ++  G+ P+  T+N +I+  C  GK        + M     A +  TY+  I  LCK
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
               QE    +D+M    + P+ + Y  +I+   +      A R++ Q+ S G SP VVT
Sbjct: 488 TKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVT 547

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID------------------- 428
           Y   +RA+   G    A ++V EM++       + Y  LID                   
Sbjct: 548 YTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT 607

Query: 429 --------------------------------SFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
                                           S  ++ ++   FE++ LM+K+       
Sbjct: 608 GVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSAR 667

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  ++ G   +  + E + L + M E  L  N+ +YN ++  +CK      A  LL  M
Sbjct: 668 TYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSM 727

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              G +PN+  Y   +  L  +G+   A+
Sbjct: 728 IGHGFLPNLIFYQYLLSGLTAEGQADRAK 756



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 25/343 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFFS 165
           Y   I+   K++ S + LF+  +ML   V+P +  +  ++  +    ++    + W    
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C    DV ++   ++  C  G L++A  V+ ++++     + + Y +LIDG    G 
Sbjct: 538 SQGCSP--DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLI------------------CGLFKNGLQKDGFEF 267
            +RA  + + +   G+ +  + +T  I                    ++K     D FE 
Sbjct: 596 TDRAVTILKHMT--GVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFEL 653

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +E M+ N V  S  TY  ++  +  E ++ E   L   M+   +  N   YN L+   CK
Sbjct: 654 FELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCK 713

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                +A  LL  M   G  PN+I Y  L+ G    G+ D+A  +F   +    +   + 
Sbjct: 714 LRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIV 773

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + V+I  F + G++ M  D++  +E+    PS+ TY +L +  
Sbjct: 774 WKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 163/409 (39%), Gaps = 52/409 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----- 163
           Y  +IDA  K+   D+A   F  +   G+RP S TFN+++  + K+  FD    F     
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI 467

Query: 164 -------------FSENRCK------------------VELDVYSFGILIKGCCEAGDLN 192
                        F EN CK                  V+    ++ I+I       +  
Sbjct: 468 SAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYG 527

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  +  Q+   G SP+VV YT+ +   C  G ++ A+ +  ++ +   +     Y  LI
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG----------------KV 296
            G    G         + M      P+ +T+  L+                       ++
Sbjct: 588 DGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIEL 647

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           ++ F+LF+ M+   V  +  TY +++ G  +E R+ E   L+  MK   +  N   YN L
Sbjct: 648 ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ++ FC       A+ L   +  +G  P+++ Y  L+   +  G +  A ++ R    +  
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
              E+ + ++ID F+R    +   +M S++++    P   TY +L   L
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 246/467 (52%), Gaps = 4/467 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           +I+A  K++  +    +   M + GV P   T+N+L+    +    ++ +        K 
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++  V+++  +I G C+ G   +A  VL+++ ++G SP+   Y  L+  CC+N ++  A+
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F ++   G+V    +++ LI  L KNG      +++  M+  G++P    Y  LI  +
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +SE  K+ DEM  +    +VVTYNT++ GLCKE  + EA+ L  +M   G+ P+ 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI+G+   G  +KA  LF  +      P VVTYN LI  F K    +  ++L  +
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  R I P+ ++Y ILI+ +     + +AF ++  M + GF   + T   ++ G C  GN
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +A +  ++M    + P+ + YN +I G+ KE N  RA  L+ +M   GL+P++ +Y+ 
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            +    + G+  EAE+++ +M++ G+ P  S Y  L   +  +NN++
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLK 726



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 259/528 (49%), Gaps = 11/528 (2%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
            +H+ QS S ++ +L+    S     AQ +IL+++     S      SL+          
Sbjct: 128 FKHSLQSFSAMIHILVR---SRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGN---CG 181

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SNP+    +++ ++  ++++R   +    F  +   G+    N  NSLL  ++K    D 
Sbjct: 182 SNPL----VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDL 237

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W  + E  R  V+++VY+  I+I   C+   +      L+ +EE G  P+VV Y +LI+
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 297

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             C+ G +E A  L   +   GL     TY  +I GL K G         ++M   G+SP
Sbjct: 298 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 357

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TYN L+ E C    + +  ++FDEM  + V  ++V+++ LI  L K   + +A +  
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 417

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             MK AG++P+ + Y  LI GFC  G   +A ++ +++   G    VVTYN ++    K 
Sbjct: 418 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A +L  EM ERG+ P   T+T LI+ + +  +M KA  ++ +M +    PDV TY
Sbjct: 478 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 537

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             LI G C    M++ ++L+N M   ++ PN + Y ++I GYC  G    A RL  EM E
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           KG    I + ++ +   C+ G   +A+  L+ ML  G+ P    YN L
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 261/506 (51%), Gaps = 9/506 (1%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKM------SSHSHAAAQTLILKIISGRITSS 81
           A+ ++    R G+Q    +++I++  L          S  S    + +   +++     +
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 297

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           ++  + LL    +L  S S    K  +  Y +II+   K+    +A     +ML  G+ P
Sbjct: 298 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 357

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVL 198
            + T+N LL+   ++ +       F E   + V  D+ SF  LI    + G L++A +  
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 417

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             ++  G +P+ VIYT LI G C+NG +  A  +  ++ E G V    TY  ++ GL K 
Sbjct: 418 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            +  +  E + +M   GV P  YT+  LI+ Y  +G +++   LF+ M  R +  +VVTY
Sbjct: 478 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 537

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI G CK   +++   L + M    I PN I+Y  LI+G+C+ G   +AFRL++++  
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   +++T N +++ + +AGN+  A + +  M  +GI P  +TY  LI+ F++ ++M++
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 657

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF + + M+ SG  PDV TY V+++G   +G M+EA  +   M E  + P+   Y  +I 
Sbjct: 658 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPN 524
           G+  + N   A R+  EM ++G VP+
Sbjct: 718 GHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 193/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  + G ++ A+E+  ++   G   NV     +I+  CKN  IE  K     + E G
Sbjct: 225 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 284

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI    + GL ++ FE  + M   G+ P ++TYN +I+  C  GK     
Sbjct: 285 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 344

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            + DEM    ++ +  TYN L+   C+   + +AER+ D+M   G+ P++++++ LI   
Sbjct: 345 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  D+A + F  +K+ G +P  V Y +LI  F + G    A  +  EM E+G     
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  +++   +   + +A E+++ M + G  PD YT+  LI+G    GNM +A  LF  
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L+P+ V YN +I G+CK     +   L  +M  + + PN  SY   I   C  G 
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  L ++M++ G + ++   N + + 
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKG 613


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 235/461 (50%), Gaps = 2/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +++ I+  +++  L+  AL+ F  M   G  P   + NSLL  ++K+         + + 
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +  DV+   I++   C+ G +++A   + ++E +G  PN+V Y SLI+G    GD+
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNC 285
           E AK + + + E G+     TYT+LI G  K     +  +    MQ    + P    Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC  GK+ +  +L DEM    +  N+   N+LI G CK   + EAE ++ +M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  +YN L+DG+C  G T +AF L +++   G  P+V+TYN L++   + G    A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M +RG+ P EV Y+ L+D   + ++ E A  ++  +   GF+    T+  +I GL
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G M EA ++F+ M +    P+ + Y  +I GYCK  N  +A ++ G M  + + P+I
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 577

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             Y+S I  L +  +  E   LL +M   GL P++  Y  L
Sbjct: 578 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 246/494 (49%), Gaps = 43/494 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I+ + K     +A     +M+D  ++P S ++N+LL    +     + +     N C 
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF-----NLCD 426

Query: 171 ------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 +E  V ++  L+KG C  G  + A ++ + + + G +P+ V Y++L+DG  K  
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E A  L++ I   G   ++ T+  +I GL K G   +  E ++KM+  G SP   TY 
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  YC    V + FK+   M    ++ ++  YN+LI GL K  R+ E   LL +M + 
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN++TY  LIDG+C  G  DKAF  + ++  NG S +++  + ++    + G    A
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 405 SDLVREMEERG--------------------------------ITPSEVTYTILIDSFVR 432
           + L+++M + G                                + P+ + Y I I    +
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ++ A   +S++   GF PD +TY  LIHG    GN+ EA +L + M    L PN V 
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK  N  RA RL  ++++KGL PN+ +Y++ I   C+ G    A  L ++M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 553 KLGLKPSVSLYNIL 566
           + G+ PSV  Y+ L
Sbjct: 847 EEGISPSVVTYSAL 860



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 240/527 (45%), Gaps = 69/527 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+ ++     + A      M + GV     T+  L+    K C  D+        +
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  L  D  ++G+LI G C  G ++ A  +L+++  +G   N+ I  SLI+G CK G+I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +  ++ +  L    ++Y  L+ G  + G   + F   +KM   G+ P++ TYN L
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVV------------------------------ 316
           +   C  G   +  +++  M  R VA + V                              
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 317 -----TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                T+NT+I GLCK  ++ EAE + D+MK  G SP+ ITY  LIDG+C A    +AF+
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +   ++    SPS+  YN LI    K+      +DL+ EM  RG+TP+ VTY  LID + 
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE-------- 483
           +   ++KAF  Y  M ++G S ++     ++ GL   G + EA+ L   M +        
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683

Query: 484 ------------------------TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                                   T L PN++VYN+ I G CK G    A R    ++ K
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G VP+  +Y + I      G   EA  L ++ML+ GL P++  YN L
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 232/476 (48%), Gaps = 33/476 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++    +    D AL  +H M+  GV P    +++LL  + K  +F+     + +  
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +       +F  +I G C+ G + +A E+ ++++++G SP+ + Y +LIDG CK  ++ 
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +   +    +  +   Y  LI GLFK+    +  +   +M + G++P++ TY  LI
Sbjct: 560 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM------ 341
             +C EG + + F  + EM    ++ N++  +T++ GL +  R+ EA  L+ +M      
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 342 -----------KMAGIS---------------PNVITYNKLIDGFCDAGETDKAFRLFNQ 375
                      + A I                PN I YN  I G C  G+ D A R F+ 
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           L   G  P   TY  LI  +S AGN   A  L  EM  RG+ P+ VTY  LI+   +S++
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A  ++  + + G  P+V TY  LI G C  GNM  A KL + M E  + P+ V Y+ 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +I G CK G+  R+++LL +M + G+   +  Y + +    + G+  +   L + M
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 185/372 (49%), Gaps = 33/372 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K+    QA      M    + P    +NSL+  + KS    +     +E  
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  ++ ++G LI G C+ G L+KAF    ++ E G S N++I ++++ G  + G I+
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 228 RAKMLFRKIGELG--------------------------------LVATQHTYTVLICGL 255
            A +L +K+ + G                                L+     Y + I GL
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K G   D   F+  + L G  P  +TY  LIH Y   G V E F+L DEM  R +  N+
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN LI GLCK   V  A+RL  ++   G+ PNV+TYN LIDG+C  G  D AF+L ++
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G SPSVVTY+ LI    K G+ + +  L+ +M + G+    + Y  L+  ++RS +
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904

Query: 436 MEKAFEMYSLMQ 447
           M+K  ++Y +M 
Sbjct: 905 MQKIHKLYDMMH 916



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 212/427 (49%), Gaps = 5/427 (1%)

Query: 104 TKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
           TKSR+ + ++I    K     +A   F +M D G  P   T+ +L+    K+ +  + + 
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +  R  +   +  +  LI G  ++  L +  ++L ++   G +PN+V Y +LIDG C
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +++A   + ++ E GL A     + ++ GL++ G   +     +KM  +G  P   
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD-- 681

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            + C +        + +     DE     +  N + YN  I GLCK  +V +A R    +
Sbjct: 682 -HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + G  P+  TY  LI G+  AG  D+AFRL +++   G  P++VTYN LI    K+ N 
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L  ++ ++G+ P+ VTY  LID + +  +M+ AF++   M + G SP V TY  L
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+GLC  G+++ + KL N M +  ++   + Y  ++ GY + G   +  +L   M+ + L
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCL 920

Query: 522 VPNIASY 528
                S+
Sbjct: 921 STTAISH 927



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 250/585 (42%), Gaps = 84/585 (14%)

Query: 27  KAFSLFN--WASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           + FS+F     SR  L+  P  +S   R LL K+   SH A   L+ +I           
Sbjct: 3   RYFSIFTPPLPSRLHLRR-PIHLS---RTLLWKLRDESHPAPPELVSRI----------- 47

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKS-RLSDQALFYFHQML--DSGVRP 139
                C L  L     N ++K      + I+DA L++ RL+  A   F Q +      RP
Sbjct: 48  -----CRLVLL--RRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRP 100

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF--EV 197
              ++  L+  + +   +D+   + ++               +   C+  D       E+
Sbjct: 101 NVKSYCKLVHILSRGRMYDETRAYLNQ---------------LVDLCKFKDRGNVIWDEL 145

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           +    E  FSP V  +  ++    + G  + A  +F  +G+ G + +  +   L+  L K
Sbjct: 146 VGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVK 203

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
           NG        Y++M   G+ P ++  + +++ +C +GKV E      +M +  V  N+VT
Sbjct: 204 NGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 263

Query: 318 YNTLIC-----------------------------------GLCKEMRVQEAERLLDQMK 342
           Y++LI                                    G CK+ ++ EAE++L  M+
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 343 -MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             A + P+   Y  LIDG+C  G+ D A RL +++   G   ++   N LI  + K G  
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  ++  M +  + P   +Y  L+D + R     +AF +   M + G  P V TY  L
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + GLC  G   +A ++++ M +  + P++V Y+ ++ G  K  N   A  L  ++  +G 
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +  ++++ I  LC+ GK  EAE + ++M  LG  P    Y  L
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+++  + ++  Y  +G       +FD M       ++ + N+L+  L K      A  
Sbjct: 155 SPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +  QM   GI P+V   + +++ FC  G+ D+A     ++++ G  P++VTY+ LI  + 
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 272

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDV 455
             G+ + A  +++ M E+G++ + VTYT+LI  + +   M++A ++   MQ+ +   PD 
Sbjct: 273 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             YGVLI G C  G + +A +L + M    L+ N  + N +I GYCK G  + A  ++  
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M +  L P+  SY++ +   C++G   EA  L ++ML+ G++P+V  YN L + 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 446



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 117 LKSRLSDQALFYFHQMLDSGVR----PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE 172
           LKS +   A+      LD   +    P +  +N  +  + K+   D    FFS    K  
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745

Query: 173 L-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           + D +++  LI G   AG++++AF + +++   G  PN+V Y +LI+G CK+ +++RA+ 
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF K+ + GL     TY  LI G  K G     F+  +KM   G+SPS+ TY+ LI+  C
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLC 865

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G +    KL ++M    V   ++ Y TL+ G  +   +Q+  +L D M +  +S   I
Sbjct: 866 KHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAI 925

Query: 352 TYNKL 356
           ++ ++
Sbjct: 926 SHKQV 930



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 16/228 (7%)

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K     PNV +Y KL+         D+     NQL             V +  F   GN 
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------------VDLCKFKDRGNV 140

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +  +LV    E   +P+   + +++  +V     + A  ++  M K G  P + +   L
Sbjct: 141 -IWDELVGVYREFAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           ++ L   G    A  ++  M    + P+  + ++M+  +CK+G    A   + +M   G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            PNI +Y S I      G    A+ +L  M + G+  +V  Y +L + 
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/541 (28%), Positives = 268/541 (49%), Gaps = 11/541 (2%)

Query: 28  AFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           A   F WA  R G QHT ++  I++ +L     +  ++ A  ++ ++I  R    S+   
Sbjct: 115 ALRFFEWAKGRIGFQHTSEAYCILVHILFC---ARFYSDANAVLKELICLRRVLPSWDVF 171

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            LL      + + +  V    +++++  A ++  + ++A   F +M    V P+  + N+
Sbjct: 172 DLL------WATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNA 225

Query: 147 LLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           LL  + K    D    FF +     ++  V+++ I+I   C+ GDL  A  +  Q++E G
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           F+P++V Y SLIDG  K G ++    +F ++ +        TY  LI    K       F
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           EF  +M+ NG+ P++ TY+  I  +C EG + E  K F +MR   +  N  TY +LI   
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CK   + EA +L++++  AGI  NV+TY  L+DG C+ G   +A  +F  + + G +P+ 
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TY  L+  F KA   + A D+++EM+E+ I P  + Y  ++        +E+A  +   
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 525

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           +++SG + +   Y  L+      G   EA  L   M +  L   +V Y  +I G CK G 
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGL 585

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+   G M+E GL PN+A Y++ +  LC++  +  A+ L ++ML  G+ P    Y  
Sbjct: 586 VQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 566 L 566
           L
Sbjct: 646 L 646



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 233/461 (50%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K    + A   F QM ++G  P   T+NSL+    K    D+    F + +
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV ++  LI   C+   + KAFE L++++  G  PNVV Y++ ID  CK G ++
Sbjct: 318 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 377

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F  +  + L   + TYT LI    K G   +  +  E++   G+  ++ TY  L+
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 437

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG++ E  ++F  M +  VA N  TY  L+ G  K   ++ A+ +L +MK   I 
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++ Y  ++ G C+    ++A  L  ++K +G + + V Y  L+ A+ K+G +  A  L
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+  +EVTY  LID   +S  +++A   +  M + G  P+V  Y  L+ GLC 
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
               + A KLF+ M +  + P+ + Y  +I G  K GN   AL L   M E G+  ++ +
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y++ I  L   G+  +A  LL++M+  G+ P   +Y  L +
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 225/454 (49%), Gaps = 1/454 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID H K  L D+ +  F QM D+   P   T+N+L+    K     K + F  E +
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +V ++   I   C+ G L +A +    +  +  +PN   YTSLID  CK G++ 
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  +I + G+     TYT L+ GL + G  K+  E +  M   GV+P+  TY  L+
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +    ++     +  EM+ + +  +++ Y T++ GLC E R++EA+ L+ ++K +GI+
Sbjct: 473 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 532

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y  L+D +  +G+  +A  L  ++   G   + VTY  LI    K+G  + A   
Sbjct: 533 TNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHH 592

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M E G+ P+   YT L+D   +++  E A +++  M   G  PD   Y  LI G   
Sbjct: 593 FGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 652

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN++EA  L + M E  +E +   Y  +I+G    G   +A  LL EM  KG++P+   
Sbjct: 653 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 712

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           Y   I      GK  EA  L N+M K G+   +S
Sbjct: 713 YMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 222/442 (50%), Gaps = 3/442 (0%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           +C   Q+  +  +P   +  Y ++I+   K     +A  + H+M  +G++P   T+++ +
Sbjct: 310 ICIFEQMKDADCDPDVIT--YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI 367

Query: 149 IFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
               K     +   FF +  R  +  + +++  LI   C+AG+L +A +++ ++ + G  
Sbjct: 368 DAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 427

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
            NVV YT+L+DG C+ G ++ A+ +FR +   G+   Q TYT L+ G  K    +   + 
Sbjct: 428 LNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDI 487

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
            ++M+   + P L  Y  ++   CNE ++ E   L  E++   +  N V Y TL+    K
Sbjct: 488 LKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFK 547

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             +  EA  LL++M   G+    +TY  LIDG C +G   +A   F ++   G  P+V  
Sbjct: 548 SGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAV 607

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  L+    K    ++A  L  EM ++G+ P ++ YT LID  ++  ++++A  +   M 
Sbjct: 608 YTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 667

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           + G   D++ Y  LI GL   G +++A  L + M    + P++VVY  +I  Y   G   
Sbjct: 668 EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVD 727

Query: 508 RALRLLGEMNEKGLVPNIASYS 529
            AL L  EM ++G++  ++ ++
Sbjct: 728 EALELQNEMAKRGMITGLSDHA 749



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P   ++ +L     + G +E A   F K+ +  +     +   L+  L K G      +F
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           ++ M   G+  S++TYN +I   C EG +     LF +M+      ++VTYN+LI G  K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              + E   + +QMK A   P+VITYN LI+ FC      KAF   +++K+NG  P+VVT
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y+  I AF K G  + A     +M    +TP+E TYT LID+  ++ ++ +A ++   + 
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           ++G   +V TY  L+ GLC +G MKEA ++F +M    + PN   Y  ++ G+ K     
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A  +L EM EK + P++  Y + +  LC + +  EA++L+ ++ + G+  +  +Y  L 
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 568 RA 569
            A
Sbjct: 543 DA 544


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 204/391 (52%), Gaps = 3/391 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+     LI+G C  G   KA  V+  LE+ G  P+V+ Y  LI G CK+G+I+ A    
Sbjct: 91  DIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---L 147

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + +  + +     TY  ++  L  +G  K   E  ++       P + TY  LI   C E
Sbjct: 148 QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKE 207

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KL DEMR++    +VVTYN LI G+CKE R+ EA + L+ M   G  PNVIT+
Sbjct: 208 SGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITH 267

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A +L + +   G SPSVVT+N+LI    + G    A D++ +M  
Sbjct: 268 NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 327

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G TP+ ++Y  L+  F +   M++A E   +M   G  PD+ TY  L+  LC  G +  
Sbjct: 328 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G + RA++LL EM  KGL P+I +YSS + 
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L ++GK  EA    + +  LG++P+   YN
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 227/446 (50%), Gaps = 2/446 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    +   + +A +    +  SG  P   T+N L+    KS   D        +R  
Sbjct: 97  SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVL--DRMN 154

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV ++  +++  C++G L +A EVL++  +    P+V+ YT LI+  CK   + +A 
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++   G      TY VLI G+ K G   +  +F   M   G  P++ T+N ++   
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+  +  KL  +M  +  + +VVT+N LI  LC++  +  A  +L++M M G +PN 
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+ GFC   + D+A    + + S G  P +VTYN L+ A  K G   +A +++ +
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G +P  +TY  +ID   +    E+A ++   M++ G  PD+ TY  L+ GL  +G 
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA K F+ +    + PN + YN ++ G CK   + RA+  L  M  K   P  A+Y+ 
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            I  +  +G   EA  LLN++   GL
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 4/415 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I  + KS   D AL    +M    V P   T+N++L  +  S    +         
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 186

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    DV ++ ILI+  C+   + +A ++L+++   G  P+VV Y  LI+G CK G ++
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G      T+ +++  +   G   D  +    M   G SPS+ T+N LI
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +G +     + ++M       N ++YN L+ G CKE ++  A   LD M   G  
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 366

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN L+   C  G+ D A  + NQL S G SP ++TYN +I   SK G ++ A  L
Sbjct: 367 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 426

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G+ P  +TY+ L+    R   +++A + +  ++  G  P+  TY  ++ GLC 
Sbjct: 427 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 486

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
                 A      M   + +P +  Y ++I G   EG +  AL LL E+  +GLV
Sbjct: 487 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 3/315 (0%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L +NG  +DGF+F E M   G  P +     LI  +C  GK  +   + + +       +
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN LI G CK   +  A ++LD+M +A   P+V+TYN ++   CD+G+  +A  + +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +       P V+TY +LI A  K      A  L+ EM  +G  P  VTY +LI+   +  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A +  + M   G  P+V T+ +++  +C  G   +A KL + M      P+ V +N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I   C++G   RA+ +L +M   G  PN  SY+  +   C++ K   A   L+ M+  
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 555 GLKPSVSLYNILYRA 569
           G  P +  YN L  A
Sbjct: 364 GCYPDIVTYNTLLTA 378


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 274/616 (44%), Gaps = 85/616 (13%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A  LF WA  Q G + +      IL +L       S       ++     RI     
Sbjct: 95  PRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDV-- 152

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                      L     +     ++ + +I  + K  + +Q L  F +M+ S + P    
Sbjct: 153 -----------LIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 201

Query: 144 FNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
            N +L I   K        ++ +     ++  + ++  L+   C+ G + +  ++L++++
Sbjct: 202 CNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQ 261

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G +PN V Y  LI+G  K G+ E+AK L  ++ + GL  + +TY  LI G F  G+  
Sbjct: 262 RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLA 321

Query: 263 DGFEFYEKMQLNGVSPSLYTYN-----------------------------------CLI 287
           +     E+M L G SP++ TYN                                    LI
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC  G + + F LFDE+R   +   +VTYNTL+ GLC++  ++ A++L  +M   GI+
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 348 PNVITYNKLIDGFCDAG-----------------------------------ETDKAFRL 372
           P+++TY  L++G C  G                                   +T +AF L
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++ + G  P ++ YNV++    K GN + AS+L+++M   G+ P  VTYT +I + + 
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  + K  E++  M   G +P V TY VLIHG   KG ++ A   F+ M E  + PN + 
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK     +A     EM EKG+ PN  SY+  I   C  G W EA  L  QML
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 553 KLGLKPSVSLYNILYR 568
             G++P    ++ L +
Sbjct: 682 DRGVQPDSCTHSALLK 697



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 214/433 (49%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+   K    +QA     +ML +G++  + T+N L+          +      E  
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K     V ++   I G C+ G ++ A + L+ +      P+VV Y +LI G C+ G++ 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A +LF ++  + L  T  TY  L+ GL + G  +   +   +M   G++P + TY  L+
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G +S   + FDEM H  +  +   Y T I G  K      A  L ++M   G  
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++I YN ++DG C  G  ++A  L  ++ S+G  P  VTY  +I A  + G  +   ++
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G+TPS VTYT+LI        +E+AF  +S MQ+ G  P+V TY  LI+GLC 
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M +A   F  M E  + PN   Y ++I   C  GN   AL L  +M ++G+ P+  +
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691

Query: 528 YSSTIGVLCQDGK 540
           +S+ +  L +D K
Sbjct: 692 HSALLKQLGKDCK 704



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 37/363 (10%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSF 178
           R+SD A+     ML + + P   ++N+L+    +  +  K +L F E R       + ++
Sbjct: 354 RMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTY 412

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF----- 233
             L+ G C  G+L  A ++  ++   G +P++V YT L++G CK G +  A+  F     
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472

Query: 234 ------------RKIGELGLVATQHT------------------YTVLICGLFKNGLQKD 263
                       R +GEL L  T                     Y V++ GL K G  ++
Sbjct: 473 EGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 532

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E  +KM  +GV P   TY  +IH +   G++ +G ++F EM  + +  +VVTY  LI 
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIH 592

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G   + R++ A     +M+  GI PNVITYN LI+G C     D+A+  F ++   G  P
Sbjct: 593 GHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +  +Y +LI      GN + A  L ++M +RG+ P   T++ L+    +   ++   ++ 
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLE 712

Query: 444 SLM 446
           SL+
Sbjct: 713 SLL 715


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 259/528 (49%), Gaps = 11/528 (2%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
            +H+ QS S ++ +L+    S     AQ +IL+++     S      SL+          
Sbjct: 232 FKHSLQSFSAMIHILVR---SRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGN---CG 285

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SNP+    +++ ++  ++++R   +    F  +   G+    N  NSLL  ++K    D 
Sbjct: 286 SNPL----VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDL 341

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W  + E  R  V+++VY+  I+I   C+   +      L+ +EE G  P+VV Y +LI+
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 401

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             C+ G +E A  L   +   GL     TY  +I GL K G         ++M   G+SP
Sbjct: 402 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 461

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TYN L+ E C    + +  ++FDEM  + V  ++V+++ LI  L K   + +A +  
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             MK AG++P+ + Y  LI GFC  G   +A ++ +++   G    VVTYN ++    K 
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A +L  EM ERG+ P   T+T LI+ + +  +M KA  ++ +M +    PDV TY
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             LI G C    M++ ++L+N M   ++ PN + Y ++I GYC  G    A RL  EM E
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           KG    I + ++ +   C+ G   +A+  L+ ML  G+ P    YN L
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 246/467 (52%), Gaps = 4/467 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           +I+A  K++  +    +   M + GV P   T+N+L+    +    ++ +        K 
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++  V+++  +I G C+ G   +A  VL+++ ++G SP+   Y  L+  CC+N ++  A+
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F ++   G+V    +++ LI  L KNG      +++  M+  G++P    Y  LI  +
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +SE  K+ DEM  +    +VVTYNT++ GLCKE  + EA+ L  +M   G+ P+ 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI+G+   G  +KA  LF  +      P VVTYN LI  F K    +  ++L  +
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  R I P+ ++Y ILI+ +     + +AF ++  M + GF   + T   ++ G C  GN
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +A +  ++M    + P+ + YN +I G+ KE N  RA  L+ +M   GL+P++ +Y+ 
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            +    + G+  EAE+++ +M++ G+ P  S Y  L   +  +NN++
Sbjct: 784 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLK 830



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 260/506 (51%), Gaps = 9/506 (1%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKM------SSHSHAAAQTLILKIISGRITSS 81
           A+ ++    R G+Q    +++I++  L          S  S    + +   +++     +
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 401

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           ++  + LL    +L  S S    K  +  Y +II+   K+    +A     +ML  G+ P
Sbjct: 402 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 461

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVL 198
            + T+N LL+   ++ +       F E   + V  D+ SF  LI    + G L++A +  
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             ++  G +P+ VIYT LI G C+NG +  A  +  ++ E G      TY  ++ GL K 
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            +  +  E + +M   GV P  YT+  LI+ Y  +G +++   LF+ M  R +  +VVTY
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI G CK   +++   L + M    I PN I+Y  LI+G+C+ G   +AFRL++++  
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   +++T N +++ + +AGN+  A + +  M  +GI P  +TY  LI+ F++ ++M++
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 761

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF + + M+ SG  PDV TY V+++G   +G M+EA  +   M E  + P+   Y  +I 
Sbjct: 762 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPN 524
           G+  + N   A R+  EM ++G VP+
Sbjct: 822 GHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 193/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  + G ++ A+E+  ++   G   NV     +I+  CKN  IE  K     + E G
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI    + GL ++ FE  + M   G+ P ++TYN +I+  C  GK     
Sbjct: 389 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            + DEM    ++ +  TYN L+   C+   + +AER+ D+M   G+ P++++++ LI   
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  D+A + F  +K+ G +P  V Y +LI  F + G    A  +  EM E+G     
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  +++   +   + +A E+++ M + G  PD YT+  LI+G    GNM +A  LF  
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L+P+ V YN +I G+CK     +   L  +M  + + PN  SY   I   C  G 
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  L ++M++ G + ++   N + + 
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKG 717



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCE 187
           F +M   GV P   +F++L+  + K+   D+   +F + +   +  D   + ILI G C 
Sbjct: 486 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 545

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G +++A +V +++ E G   +VV Y ++++G CK   +  A  LF ++ E G+    +T
Sbjct: 546 NGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT 605

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +T LI G  K+G        +E M    + P + TYN LI  +C   ++ +  +L+++M 
Sbjct: 606 FTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 665

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R +  N ++Y  LI G C    V EA RL D+M   G    +IT N ++ G+C AG   
Sbjct: 666 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 725

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KA    + +   G  P  +TYN LI  F K  N   A  LV +ME  G+ P  +TY +++
Sbjct: 726 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 785

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F R   M++A  +   M + G +PD  TY  LI+G   + N+KEA ++ + M +    
Sbjct: 786 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 845

Query: 488 PND 490
           P+D
Sbjct: 846 PDD 848


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 220/423 (52%), Gaps = 40/423 (9%)

Query: 117 LKSRL--SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELD 174
           L SRL  + +A  ++ Q+LD+G+ P +  FN                             
Sbjct: 160 LMSRLPSTPEAYTFYLQLLDAGMAPETRLFN----------------------------- 190

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
                +L++     G+L  A +V +++      P VV + +LI G C+  D++    L++
Sbjct: 191 -----VLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYK 244

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ ++G+    +TY  LI G  + G  ++  + + +M+  GV+P+   +  LI  +C EG
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            V+ G  L+ +MR R V  ++V YN L+ GLC+   ++ AE ++++MK AG+ P+ +TY 
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG C  G+ D A  +  ++     S   VTY  LI   SKAG    A  ++REM E 
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            + P   TYT++ID+F R  D++  F++   MQ  G  P V TY V+++GLC  G MK A
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L ++M    + P+D+ YN+++ G CK G    +  L    + KG+VP+ A Y+S I  
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLISE 541

Query: 535 LCQ 537
           L +
Sbjct: 542 LAK 544



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 204/406 (50%), Gaps = 8/406 (1%)

Query: 68  TLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALF 127
           +L   + SG ++    TP +   +L QL  +   P T  RL+  ++   ++      A  
Sbjct: 151 SLPAPVCSGLMSRLPSTPEAYTFYL-QLLDAGMAPET--RLFNVLMRDFVRLGELVSARK 207

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCC 186
            F +M  S V+P   TFN+L+  + ++   D    L+   +   V+ DVY++G LIKG C
Sbjct: 208 VFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G +  A ++ N++ + G +PN V++T+LID  CK G++     L++ +   G++    
Sbjct: 267 RTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLV 326

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  L+ GL +    K      E+M+  G+ P   TY  LI   C +GK+     +  +M
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +EV+ + VTY  LI GL K  R  +AER+L +M  A + P+  TY  +ID FC  G+ 
Sbjct: 387 AEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
              F+L  ++++ G+ P VVTYNV++    K G  K A  L+  M   G++P ++TY IL
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           +D   +   +  + E+ S     G  PD   Y  LI  L  K   K
Sbjct: 507 LDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISELAKKKPAK 549



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 170/339 (50%), Gaps = 36/339 (10%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + + FY ++   G++P    +N L+ ++   G++    K+FDEMR R V   VVT+NTLI
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLI 227

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G+C+   +   + L  +M   G+ P+V TY  LI GFC  G  + A ++FN+++  G +
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 383 PS-----------------------------------VVTYNVLIRAFSKAGNSKMASDL 407
           P+                                   +V YN L+    +A N K A  +
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESI 347

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V EM+  G+ P +VTYT LID   +   ++ A ++   M +   S D  TY  LI GL  
Sbjct: 348 VEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   +A ++   M E  LEP++  Y M+I  +C++G+     +LL EM  KG  P + +
Sbjct: 408 AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVT 467

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  +  LC+ G+   A++LL+ ML +G+ P    YNIL
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 246/477 (51%), Gaps = 7/477 (1%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SNP      +  ++    K +   Q  + ++QM  SG+ P   T N LL  +       +
Sbjct: 90  SNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGE 149

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           G    +   R     D+ ++  LIKG C    ++KA  +  +++++G +PN + Y +L+ 
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209

Query: 219 GCCKNGDIERAKMLFRKIGE------LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           G C+ G+I  A  L +++        +       +Y+++I  L K+  + +  + +E+M+
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           + G++P++ +Y  LIH +C  GK  E  +LF+EM ++ V  NVVT+N LI  LCKE +V 
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 329

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA+ LL+ M   GI PN++TYN LI+GFC  G+ + A  LF  + S G  P V+ Y VLI
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 389

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             + K    + A  L   M + G  P   TY  L+    +   +  A +++ +M+  G  
Sbjct: 390 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIP 449

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D+Y YG+ ++GLC  G + EA +LFN +    ++ +   +N +I G CK G    A  L
Sbjct: 450 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++ ++ L P++ +Y+  I   C+ G+  +A +L  +M K G  P    Y  L R 
Sbjct: 510 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 212/429 (49%), Gaps = 7/429 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGD 190
           +L  G  P   T+ +L+  +       K  L F+   +     +  ++G L+KG C  G+
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 191 LNKAF----EVLNQ--LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           ++ A     E+LN   L  + F P V+ Y+ +ID  CK+   + A+ LF ++   G+  T
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             +YT LI G    G  ++    + +M   GV P++ T+N LI   C EGKV E   L +
Sbjct: 277 VISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M  R +  N++TYN+LI G C    +  A  L   M   G  P+VI Y  LI+G+C   
Sbjct: 337 VMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTS 396

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + ++A +L+N +   G+ P V TY  L+    + G    A  L   M+  GI      Y 
Sbjct: 397 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 456

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           I ++   ++  + +A E+++ ++      D+  +  LI GLC  G ++ A +LF  + + 
Sbjct: 457 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 516

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           +L+P+ V YN+MI  +C+ G   +A  L  +M + G  P+  +Y++ I    +  K  + 
Sbjct: 517 ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKV 576

Query: 545 EVLLNQMLK 553
             LL+ M++
Sbjct: 577 VELLHMMVQ 585



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 193/424 (45%), Gaps = 43/424 (10%)

Query: 186 CEAGDLN--KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           C+ G++   +AF+  + +     +P +  +T L+ G  K     +   L+ ++   G+  
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T  +L+  L       +G      +   G  P + TY  LI   C E ++S+   LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 304 DEMRHREVACNVVTYNTLICG--------------------------------------- 324
             M+      N +TY TL+ G                                       
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 325 --LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
             LCK+ R  EA  L ++MK+ G++P VI+Y  LI GFC  G+ ++A RLFN++ + G  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVT+NVLI    K G    A DL+  M +RGI P+ +TY  LI+ F    D+  A E+
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M   G  PDV  Y VLI+G C    ++EA KL+N M +    P+   Y  ++ G  +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    A +L G M   G+  ++  Y   +  LC++G   EA  L N++    +K  +  
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489

Query: 563 YNIL 566
           +N L
Sbjct: 490 FNCL 493



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 65/132 (49%)

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +AF+ + LM  S  +P + ++  L+ GL    +  +   L+N M  + + P+    N+++
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              C        L ++  +  +G +P+I +Y++ I  LC + +  +A +L  +M KLG  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 558 PSVSLYNILYRA 569
           P+   Y  L + 
Sbjct: 199 PNAITYGTLMKG 210


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 235/461 (50%), Gaps = 2/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +++ I+  +++  L+  AL+ F  M   G  P   + NSLL  ++K+         + + 
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +  DV+   I++   C+ G +++A   + ++E +G  PN+V Y SLI+G    GD+
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNC 285
           E AK + + + E G+     TYT+LI G  K     +  +    MQ    + P    Y  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC  GK+ +  +L DEM    +  N+   N+LI G CK   + EAE ++ +M    
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  +YN L+DG+C  G T +AF L +++   G  P+V+TYN L++   + G    A 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M +RG+ P EV Y+ L+D   + ++ E A  ++  +   GF+    T+  +I GL
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G M EA ++F+ M +    P+ + Y  +I GYCK  N  +A ++ G M  + + P+I
Sbjct: 484 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 543

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             Y+S I  L +  +  E   LL +M   GL P++  Y  L
Sbjct: 544 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 243/488 (49%), Gaps = 43/488 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I+ + K     +A     +M+D  ++P S ++N+LL    +     + +     N C 
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF-----NLCD 392

Query: 171 ------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 +E  V ++  L+KG C  G  + A ++ + + + G +P+ V Y++L+DG  K  
Sbjct: 393 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E A  L++ I   G   ++ T+  +I GL K G   +  E ++KM+  G SP   TY 
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  YC    V + FK+   M    ++ ++  YN+LI GL K  R+ E   LL +M + 
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 572

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN++TY  LIDG+C  G  DKAF  + ++  NG S +++  + ++    + G    A
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 632

Query: 405 SDLVREMEERG--------------------------------ITPSEVTYTILIDSFVR 432
           + L+++M + G                                + P+ + Y I I    +
Sbjct: 633 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 692

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ++ A   +S++   GF PD +TY  LIHG    GN+ EA +L + M    L PN V 
Sbjct: 693 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 752

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK  N  RA RL  ++++KGL PN+ +Y++ I   C+ G    A  L ++M+
Sbjct: 753 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812

Query: 553 KLGLKPSV 560
           + G+ PS+
Sbjct: 813 EEGISPSI 820



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 240/527 (45%), Gaps = 69/527 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+ ++     + A      M + GV     T+  L+    K C  D+        +
Sbjct: 230 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 289

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  L  D  ++G+LI G C  G ++ A  +L+++  +G   N+ I  SLI+G CK G+I
Sbjct: 290 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 349

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +  ++ +  L    ++Y  L+ G  + G   + F   +KM   G+ P++ TYN L
Sbjct: 350 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 409

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVV------------------------------ 316
           +   C  G   +  +++  M  R VA + V                              
Sbjct: 410 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 469

Query: 317 -----TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                T+NT+I GLCK  ++ EAE + D+MK  G SP+ ITY  LIDG+C A    +AF+
Sbjct: 470 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 529

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +   ++    SPS+  YN LI    K+      +DL+ EM  RG+TP+ VTY  LID + 
Sbjct: 530 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 589

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE-------- 483
           +   ++KAF  Y  M ++G S ++     ++ GL   G + EA+ L   M +        
Sbjct: 590 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 649

Query: 484 ------------------------TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                                   T L PN++VYN+ I G CK G    A R    ++ K
Sbjct: 650 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 709

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G VP+  +Y + I      G   EA  L ++ML+ GL P++  YN L
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 756



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 230/493 (46%), Gaps = 44/493 (8%)

Query: 30  SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
           SL N   ++G  H  + +  I R++   +   S++   TL+        TS +F     L
Sbjct: 338 SLINGYCKRGEIHEAEGV--ITRMVDWNLKPDSYSY-NTLLDGYCREGHTSEAFN----L 390

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           C   ++      P   +  Y +++    +    D AL  +H M+  GV P    +++LL 
Sbjct: 391 CD--KMLQEGIEPTVLT--YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446

Query: 150 FVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K  +F+     + +   +       +F  +I G C+ G + +A E+ ++++++G SP
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 506

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           + + Y +LIDG CK  ++ +A  +   +    +  +   Y  LI GLFK+    +  +  
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +M + G++P++ TY  LI  +C EG + + F  + EM    ++ N++  +T++ GL + 
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626

Query: 329 MRVQEAERLLDQM-----------------KMAGIS---------------PNVITYNKL 356
            R+ EA  L+ +M                 + A I                PN I YN  
Sbjct: 627 GRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA 686

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C  G+ D A R F+ L   G  P   TY  LI  +S AGN   A  L  EM  RG+
Sbjct: 687 IAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 746

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ VTY  LI+   +S+++++A  ++  + + G  P+V TY  LI G C  GNM  A K
Sbjct: 747 VPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK 806

Query: 477 LFNSMWETKLEPN 489
           L + M E  + P+
Sbjct: 807 LKDKMIEEGISPS 819



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 150/310 (48%), Gaps = 33/310 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K+    QA      M    + P    +NSL+  + KS    +     +E  
Sbjct: 511 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 570

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  ++ ++G LI G C+ G L+KAF    ++ E G S N++I ++++ G  + G I+
Sbjct: 571 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 630

Query: 228 RAKMLFRKIGELG--------------------------------LVATQHTYTVLICGL 255
            A +L +K+ + G                                L+     Y + I GL
Sbjct: 631 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 690

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K G   D   F+  + L G  P  +TY  LIH Y   G V E F+L DEM  R +  N+
Sbjct: 691 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN LI GLCK   V  A+RL  ++   G+ PNV+TYN LIDG+C  G  D AF+L ++
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810

Query: 376 LKSNGQSPSV 385
           +   G SPS+
Sbjct: 811 MIEEGISPSI 820



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 228/523 (43%), Gaps = 62/523 (11%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKS-RLSDQALFYFHQML--DSGVRPRS 141
           S +C L  L     N ++K      + I+DA L++ RL+  A   F Q +      RP  
Sbjct: 11  SRICRLVLL--RRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNV 68

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF--EVLN 199
            ++  L+  + +   +D+   + ++               +   C+  D       E++ 
Sbjct: 69  KSYCKLVHILSRGRMYDETRAYLNQ---------------LVDLCKFKDRGNVIWDELVG 113

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
              E  FSP V  +  ++    + G  + A  +F  +G+ G + +  +   L+  L KNG
Sbjct: 114 VYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNG 171

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                   Y++M   G+ P ++  + +++ +C +GKV E      +M +  V  N+VTY+
Sbjct: 172 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 231

Query: 320 TLIC-----------------------------------GLCKEMRVQEAERLLDQMK-M 343
           +LI                                    G CK+ ++ EAE++L  M+  
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           A + P+   Y  LIDG+C  G+ D A RL +++   G   ++   N LI  + K G    
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  ++  M +  + P   +Y  L+D + R     +AF +   M + G  P V TY  L+ 
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC  G   +A ++++ M +  + P++V Y+ ++ G  K  N   A  L  ++  +G   
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  ++++ I  LC+ GK  EAE + ++M  LG  P    Y  L
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 514



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 104 TKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
           TKSR+ + ++I    K     +A   F +M D G  P   T+ +L+    K+ +  + + 
Sbjct: 470 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 529

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +  R  +   +  +  LI G  ++  L +  ++L ++   G +PN+V Y +LIDG C
Sbjct: 530 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 589

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +++A   + ++ E GL A     + ++ GL++ G   +     +KM  +G  P   
Sbjct: 590 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD-- 647

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            + C +        + +     DE     +  N + YN  I GLCK  +V +A R    +
Sbjct: 648 -HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 706

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + G  P+  TY  LI G+  AG  D+AFRL +++   G  P++VTYN LI    K+ N 
Sbjct: 707 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
             A  L  ++ ++G+ P+ VTY  LID + +  +M+ AF++   M + G SP +
Sbjct: 767 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+++  + ++  Y  +G       +FD M       ++ + N+L+  L K      A  
Sbjct: 121 SPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +  QM   GI P+V   + +++ FC  G+ D+A     ++++ G  P++VTY+ LI  + 
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 238

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDV 455
             G+ + A  +++ M E+G++ + VTYT+LI  + +   M++A ++   MQ+ +   PD 
Sbjct: 239 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             YGVLI G C  G + +A +L + M    L+ N  + N +I GYCK G  + A  ++  
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M +  L P+  SY++ +   C++G   EA  L ++ML+ G++P+V  YN L + 
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 412



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 16/228 (7%)

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K     PNV +Y KL+         D+     NQL             V +  F   GN 
Sbjct: 60  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------------VDLCKFKDRGNV 106

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +  +LV    E   +P+   + +++  +V     + A  ++  M K G  P + +   L
Sbjct: 107 -IWDELVGVYREFAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 163

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           ++ L   G    A  ++  M    + P+  + ++M+  +CK+G    A   + +M   G+
Sbjct: 164 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            PNI +Y S I      G    A+ +L  M + G+  +V  Y +L + 
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 213/388 (54%), Gaps = 3/388 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D+++F  LI G C    + +A  ++NQ+ EMG  P+VVIYT++ID  CKNG ++ A  
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF ++   G+      YT L+ GL  +G  +D       M    + P + T+N LI  + 
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK+ +  +L++EM    +A N+ TY +LI GLC E R+ EA ++   M+  G  P+V+
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  LI+GFC   + + A ++F ++   G + + +TY  LI+ F   G   +A ++   M
Sbjct: 318 AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK---SGFSPDVYTYGVLIHGLCMK 468
             RG+ P+  TY +L+     +  + KA  ++  MQK    G  P++ TY VL+HGLC  
Sbjct: 378 VSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++A  +F  M +  ++   + Y ++I G CK G    AL L   +  KG+ PN+ +Y
Sbjct: 438 GKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTY 497

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I  L ++G   EA VL  +M + G+
Sbjct: 498 TTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 234/467 (50%), Gaps = 14/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+   L S   ++AL  F  M++S   P    F  LL  + K   FD        N 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFD-----VVINL 93

Query: 169 CK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           CK      V  D+Y+  +L+   C++     A   L +L ++GF P++  +TSLI+G C 
Sbjct: 94  CKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCL 153

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
              IE A  +  ++ E+G+      YT +I  L KNG   +    + +M+  G+ P +  
Sbjct: 154 GNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVM 213

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  L++  CN G+  +   L   M  R++  +V+T+N LI    KE ++ +A+ L ++M 
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
              I+PN+ TY  LI+G C  G  D+A ++F  +++ G  P VV Y  LI  F K    +
Sbjct: 274 QMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVE 333

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  +  EM ++G+T + +TYT LI  F        A E++  M   G  P++ TY VL+
Sbjct: 334 DAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLL 393

Query: 463 HGLCMKGNMKEASKLFNSMWETKLE---PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           H LC  G + +A  +F  M + +++   PN   YN+++ G C  G   +AL + G+M ++
Sbjct: 394 HCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   I +Y+  I  +C+ GK  +A  L   +   G+KP+V  Y  +
Sbjct: 454 DMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTM 500



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 179/349 (51%), Gaps = 4/349 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           +Y +IID+  K+   D AL  F+QM + G+RP    + SL+  +  S  + D   L    
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + K++ DV +F  LI    + G L  A E+ N++ +M  +PN+  YTSLI+G C  G +
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G       YT LI G  K    +D  + + +M   G++ +  TY  L
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK---M 343
           I  +   GK +   ++F  M  R V  N+ TYN L+  LC   +V +A  + + M+   +
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ PN+ TYN L+ G C  G+ +KA  +F  ++       ++TY ++I+   KAG  K 
Sbjct: 418 DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKD 477

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           A +L   +  +G+ P+ VTYT +I    R   M +A  ++  M++ G S
Sbjct: 478 ALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 108/203 (53%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A  LF+ +  +   PS++ +  L+   +K     +  +L + ++  G++    T  +L
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ++ F +S     A      + K GF PD++T+  LI+G C+   ++EA  + N M E  +
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P+ V+Y  +I   CK G+   AL L  +M   G+ P++  Y+S +  LC  G+W +A++
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           LL  M+K  +KP V  +N L  A
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDA 255


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 240/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN----------------------- 145
           Y ++ID   K++L D+A   F QM+D+G +P + T+N                       
Sbjct: 237 YTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMS 296

Query: 146 ------------SLLIFVIKSCSFDKGWLFF-SENRCKVELDVYSFGILIKGCCEAGDLN 192
                       SLL ++ K+    +   FF S  R  ++  V ++GILI G    G L+
Sbjct: 297 ARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALS 356

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +    L+ + E G SP+  I+        K G I++A  +F K+ + GL      Y  LI
Sbjct: 357 EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALI 416

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P++  +N L++  C   K     +L  EM  + + 
Sbjct: 417 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 476

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N V +NTLIC LC   RV E  RL+D M+  G+ P+  +Y  LI G+C  G TD+A ++
Sbjct: 477 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G SP+ VTYN L+  +  A     A  L REM  +G+TP  VTY  ++    +
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  SG   D+YTY ++++GLC    + EA K+F S+    L+ N + 
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 656

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + +MI    K G    A+ L   +   GLVPN+ +Y      L ++G   E + L + M 
Sbjct: 657 FTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME 716

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 717 KNGTAPNSQMLNALVR 732



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 202/428 (47%), Gaps = 35/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V S+ I+I G    G ++K + +  ++ + G  P+VV YT++IDG CK    +RA+ +F
Sbjct: 198 NVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVF 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++ + G     +TY  LI G    G  K+  +  E+M   G+ P  YTY  L++  C  
Sbjct: 258 QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD-------------- 339
           G+  E    FD M  + +   V TY  LI G   +  + E    LD              
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377

Query: 340 ---------------------QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
                                +M+  G+SPNV+ Y  LID  C  G  D A   FNQ+ +
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P++V +N L+         + A +LV EM ++GI P+ V +  LI +      + +
Sbjct: 438 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
              +  LM+  G  PD ++Y  LI G C+ G   EA K+F+ M    L P +V YN ++ 
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC       A  L  EM  KG+ P + +Y++ +  L Q  ++ EA+ L   M+  G K 
Sbjct: 558 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC 617

Query: 559 SVSLYNIL 566
            +  YNI+
Sbjct: 618 DIYTYNII 625



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 248/550 (45%), Gaps = 49/550 (8%)

Query: 64  AAAQTLIL-KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS 122
           A A+ L L +II+ R  S S      L    +L    + P +  R +  ++ A  ++R S
Sbjct: 8   APARCLELERIIAERARSRSLGLDDALKLFDELL-HHARPAS-VRAFNHLLTAVSRARCS 65

Query: 123 ---DQALFYFHQML---DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
              + A+ +F++M+      V P   T++ L+    +    + G+  F    +    +D 
Sbjct: 66  SASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDH 125

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCK------------ 222
            +   L+KG C    + +A +VL Q + E+G  P+ V YT L+ G C             
Sbjct: 126 IAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH 185

Query: 223 --------------------------NGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
                                      G +++   LF ++ + G+     TYT +I GL 
Sbjct: 186 MMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K  L       +++M  NG  P+ YTYNCLIH Y + GK  E  ++ +EM  R +  +  
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCY 305

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY +L+  LCK  R +EA    D M   GI P V TY  LI G+   G   +     + +
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             NG SP    +N+   A++K G    A D+  +M + G++P+ V Y  LID+  +   +
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A   ++ M   G +P++  +  L++GLC     + A +L   M +  + PN V +N +
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I   C  G      RL+  M   G+ P+  SY+  I   C  G+  EAE + + M+ +GL
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 557 KPSVSLYNIL 566
            P+   YN L
Sbjct: 546 SPTEVTYNTL 555



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 214/446 (47%), Gaps = 5/446 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y S+++   K+    +A F+F  M+  G++P+ +T+  L+       +  +   F     
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN   +  D + F I      + G ++KA ++ N++ + G SPNVV Y +LID  CK G 
Sbjct: 367 EN--GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A++ F ++   G+      +  L+ GL      +   E   +M   G+ P+   +N 
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   CN G+V EG +L D M H  V  +  +Y  LI G C   R  EAE++ D M   G
Sbjct: 485 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +SP  +TYN L+ G+C A   D A+ LF ++   G +P VVTYN ++    +      A 
Sbjct: 545 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 604

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L   M   G      TY I+++   +S+ +++AF+M+  +   G   ++ T+ ++I  L
Sbjct: 605 ELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 664

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G  ++A  LF ++    L PN V Y ++     +EG+      L   M + G  PN 
Sbjct: 665 LKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 724

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQM 551
              ++ +  L   G    A   L+++
Sbjct: 725 QMLNALVRRLLHRGDISRAGAYLSKL 750



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 220/505 (43%), Gaps = 44/505 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+        D+    F +M+D G+ P   T+ +++  + K+  FD+    F +  
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + + Y++  LI G    G   +  ++L ++   G  P+   Y SL++  CKNG   
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCR 321

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+  F  +   G+     TY +LI G    G   +   F + M  NG+SP  + +N   
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + +   +F++MR   ++ NVV Y  LI  LCK  RV +AE   +QM   G++
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN++ +N L+ G C   + ++A  L  ++   G  P+ V +N LI      G       L
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501

Query: 408 VREMEERGITPSEVTYTILIDSFV---RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           +  ME  G+ P   +YT LI  +    R+D+ EK F+    M   G SP   TY  L+HG
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG---MVSIGLSPTEVTYNTLLHG 558

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF-------------------------- 498
            C    + +A  LF  M    + P  V YN ++                           
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618

Query: 499 ---------GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
                    G CK      A ++   +  KGL  NI +++  IG L + G+  +A  L  
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678

Query: 550 QMLKLGLKPSVSLYNILYRAKNNIE 574
            +   GL P+V  Y ++  A+N IE
Sbjct: 679 AIPANGLVPNVVTYRLV--AENLIE 701



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 206/421 (48%), Gaps = 1/421 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCC 186
           +   M+++G+ P  + FN       K    DK    F++ R   +  +V ++G LI   C
Sbjct: 361 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 420

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G ++ A    NQ+   G +PN+V++ SL+ G C     ERA+ L  ++ + G+     
Sbjct: 421 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 480

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +  LIC L   G   +G    + M+  GV P  ++Y  LI  YC  G+  E  K+FD M
Sbjct: 481 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGM 540

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               ++   VTYNTL+ G C   R+ +A  L  +M   G++P V+TYN ++ G       
Sbjct: 541 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 600

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  L+  + ++G    + TYN+++    K+     A  + + +  +G+  + +T+TI+
Sbjct: 601 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 660

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I + ++    E A ++++ +  +G  P+V TY ++   L  +G+++E   LF++M +   
Sbjct: 661 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 720

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN  + N ++      G+  RA   L +++E+      ++ S  + +   D     A+ 
Sbjct: 721 APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKS 780

Query: 547 L 547
           L
Sbjct: 781 L 781


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 237/469 (50%), Gaps = 13/469 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           + +I+ A+ +    D+AL +F   +     P + T+  L+  + +    D+ +    E  
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMI 119

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C  +  VY+   LI G C+ G ++ A  VL  + E    P+V+ YTSLI GCC+   
Sbjct: 120 QKDCHPDAAVYN--CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A+ L  K+ E GL      Y  L+ GL K    ++  +  E+M   G  P  ++YN 
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++   C  GK  E  K+ ++M  ++   +VVTYN+L+ G CK  ++ EAERLL+ M    
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +P VITY  LI GF  A     A+R+   +   G SP +VTYN L+    KAG  + A 
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  M E+   P  VTY+IL++   +   ++ A  +  +M + G  P++ T+  +I G 
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G + E  K+   M E    P+ V Y+ +I GYCK      A  +LG      + P+ 
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDK 471

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           ASYSS +  LC  GK  EA+ +++ M K G  P+ S Y ++     ++E
Sbjct: 472 ASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVE 520



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 238/491 (48%), Gaps = 30/491 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y S+I    ++   D+A     +M +SG+ P +  +N+LL  + K    ++      E  
Sbjct: 165 YTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMV 224

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               E D +S+  ++   CE+G   +A ++L ++ E    P+VV Y SL+DG CK   ++
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMD 284

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L   +       T  TYT LI G  +     D +   E M   G+SP L TYNCL+
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GK+ E  +L + M  ++ A +VVTY+ L+ GLCK  +V +A  LL+ M   G  
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA--------- 398
           PN++T+N +IDGFC AG+ D+  ++   +K    +P VVTY+ LI  + KA         
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464

Query: 399 --------------------GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                               G  + A +++  M ++G  P+   Y ++I      +  ++
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A +M  +M + G  P++YTY +LI+GLC    +++A  + + M E    P+   Y  +I 
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+CK      A +    M + G  P+  +Y+  I   CQ G   +A  ++  ML+ G  P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 559 SVSLYNILYRA 569
             + Y  L R+
Sbjct: 645 DAATYFSLMRS 655



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 222/442 (50%), Gaps = 13/442 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++  +   P T S  Y +++    +S   ++A     +M++    P   T+NSL+   
Sbjct: 220 LEEMVEAGREPDTFS--YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 152 IKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            K    D+      +    RC     V ++  LI G   A  L  A+ V+  + + G SP
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPT--VITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           ++V Y  L+DG CK G +E A  L   + E        TY++L+ GL K G   D     
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E M   G  P+L T+N +I  +C  GKV EG K+ + M+      +VVTY+TLI G CK 
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKA 455

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+Q+A  +L      GISP+  +Y+ +++G C  G+ ++A  + + +   G  P+   Y
Sbjct: 456 NRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            ++I           A  +++ M ERG  P+  TY+ILI+   ++  +E A  +  +M +
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  PDV TY  LI G C    M  A + F +M ++  EP+ + YN++I G+C+ GN  +
Sbjct: 570 KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEK 629

Query: 509 ALRLLGEMNEKGLVPNIASYSS 530
           A+ ++  M EKG  P+ A+Y S
Sbjct: 630 AIEVMQLMLEKGCNPDAATYFS 651



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 207/425 (48%), Gaps = 37/425 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G LI G   AG+     E+ N++    FSP+V+ + +++   C+ GD++RA   FR  
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR-- 83

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           G++    T  TY +LI GL +     + ++  ++M      P    YNCLI   C  GK+
Sbjct: 84  GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                +   M  R    +V+TY +LI G C+   + EA +L+++MK +G++P+ + YN L
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQ----------------------------------- 381
           ++G C   + ++  +L  ++   G+                                   
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P VVTYN L+  F K      A  L+ +M  R   P+ +TYT LI  F R+D +  A+ 
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M K+G SPD+ TY  L+ GLC  G ++EA +L   M E    P+ V Y++++ G C
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G    A  LL  M E+G  PN+ ++++ I   C+ GK  E   +L  M ++   P V 
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 562 LYNIL 566
            Y+ L
Sbjct: 444 TYSTL 448



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 163/350 (46%), Gaps = 12/350 (3%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDV 175
            RL+D A      M  +G+ P   T+N LL  + K+   ++         E  C    DV
Sbjct: 316 DRLAD-AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP--DV 372

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ IL+ G C+ G ++ A  +L  + E G  PN+V + ++IDG CK G ++    +   
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E+       TY+ LI G  K    +D F         G+SP   +Y+ ++   C+ GK
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E  ++ D M  +        Y  +I GLC   R  EA ++L  M   G  PN+ TY+ 
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G C     + A  + + +   G  P V TY  LI  F K      A    + M + G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             P ++ Y ILI  F +S ++EKA E+  LM + G +PD  TY  L+  L
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 152/305 (49%), Gaps = 4/305 (1%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +G+ F+ +   +   PS  TY  LI  +   G      ++ +EM  R  + +V+T+NT++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 323 CGLCKEMRVQEAERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
              C+   + + +R L   +     SP   TY  LI G C     D+A++L +++     
Sbjct: 67  KAYCQ---IGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P    YN LI    K G    A ++++ M ER   P  +TYT LI    +++ +++A +
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M++SG +PD   Y  L++GLC +  ++E SKL   M E   EP+   YN ++   C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           + G    A ++L +M EK   P++ +Y+S +   C+  K  EAE LL  M+     P+V 
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303

Query: 562 LYNIL 566
            Y  L
Sbjct: 304 TYTTL 308



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 11/291 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y  +++   K    D A      ML+ G +P   TFN+++    K+   D+G        
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E  C    DV ++  LI G C+A  +  AF +L      G SP+   Y+S+++G C  G 
Sbjct: 435 EVSCTP--DVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A+ +   + + G   T   Y ++I GL       +  +  + M   G  P+LYTY+ 
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+  C   +V +   + D M  +    +V TY +LI G CK  ++  A +    M+ +G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
             P+ + YN LI GFC +G  +KA  +   +   G +P   TY  L+R+ +
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 165/551 (29%), Positives = 286/551 (51%), Gaps = 17/551 (3%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISI-ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P    S F WA     +  P    + +L ++ S +S H  A A++L++  I  R + +S 
Sbjct: 55  PETLVSFFQWAQSSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYI--RTSDASL 112

Query: 84  TPRSLLCHLTQLFPSSS-NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           +    LC+ + L P+   +P     L++  + A+L +     AL  F +M+   ++P   
Sbjct: 113 S----LCN-SLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLL 167

Query: 143 TFNSLLIFVIK---SCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           T N+LLI +++   S S       F +  +  V LDV +F +L+ G C  G L  A  +L
Sbjct: 168 TCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGML 227

Query: 199 NQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            ++  E   +P+ V Y +++    K G +   K L   +   GLV  + TY  L+ G  K
Sbjct: 228 ERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCK 287

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G  K+ F+  E M+   + P L TYN LI+  CN G + EG +L D M+  ++  +VVT
Sbjct: 288 LGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVT 347

Query: 318 YNTLICGLCKEMRVQ-EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           YNTLI G C E+ +  EA++L++QM+  G+ PN +T+N  +   C   + ++  R   +L
Sbjct: 348 YNTLIDG-CFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL 406

Query: 377 -KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
            + +G SP +VTY+ LI+A+ K G+   A +++REM ++GI  + +T   ++D+  +   
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A  +     K G+  D  TYG LI G   +  +++A ++++ M   K+ P    +N 
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G C  G +  A+    E+ E GL+P+  +++S I   C++G+  +A    N+ +K  
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 556 LKPSVSLYNIL 566
            KP     NIL
Sbjct: 587 FKPDNYTCNIL 597



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 237/445 (53%), Gaps = 5/445 (1%)

Query: 109 YESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-E 166
           Y +I+ A   K RLSD        M  +G+ P   T+N+L+    K  S  + +      
Sbjct: 243 YNTILKAMSKKGRLSDVKDLLL-DMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  D+ ++ ILI G C AG + +  E+++ ++ +   P+VV Y +LIDGC + G  
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNC 285
             AK L  ++   G+   Q T+ + +  L K   +++   +  E ++++G SP + TY+ 
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHT 421

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  Y   G +S   ++  EM  + +  N +T NT++  LCKE +V EA  LLD     G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              + +TY  LI G+    + +KAF +++++K    +P+V T+N LI      G +++A 
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +   E+ E G+ P + T+  +I  + +   +EKAFE Y+   K  F PD YT  +L++GL
Sbjct: 542 EKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G  ++A   FN++  T+ E + V YN MI  +CK+     A  LL EM EK L P+ 
Sbjct: 602 CKEGMTEKALNFFNTLI-TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDR 660

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQ 550
            +Y+S I  L +DGK  EA+ LL +
Sbjct: 661 FTYNSIITSLMEDGKLSEADELLKK 685



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 32/395 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   +  LS +A     QM + GV+P   T N  L ++   C  +K      + +
Sbjct: 348 YNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWL---CKEEKREEVTRKVK 404

Query: 169 CKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             VE+     D+ ++  LIK   + GDL+ A E++ ++ + G   N +   +++D  CK 
Sbjct: 405 ELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ A  L     + G +  + TY  LI G F+    +  FE +++M+   ++P++ T+
Sbjct: 465 RKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTF 524

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI   C+ GK     + FDE+    +  +  T+N++I G CKE RV++A    ++   
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIK 584

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               P+  T N L++G C  G T+KA   FN L +  +  +V TYN +I AF K    K 
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTV-TYNTMISAFCKDKKLKE 643

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM-------YSLMQ--------- 447
           A DL+ EMEE+ + P   TY  +I S +    + +A E+       +  M+         
Sbjct: 644 AYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEK 703

Query: 448 -------KSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
                  K     +   Y  +I+ LC +G +KE S
Sbjct: 704 NPATSESKEELKTEAIAYSDVINELCSRGRLKEHS 738



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 166/297 (55%), Gaps = 5/297 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---EMRVQEA 334
           PS   ++  +  Y + GK     ++F +M   ++  N++T NTL+ GL +      +  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIR 393
             + D M   G+S +V T+N L++G+C  G+ + A  +  ++ S    +P  VTYN +++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A SK G      DL+ +M+  G+ P+ VTY  L+  + +   +++AF++  LM+++   P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY +LI+G+C  G+++E  +L + M   KL+P+ V YN +I G  + G S  A +L+
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL-GLKPSVSLYNILYRA 569
            +M   G+ PN  +++ ++  LC++ K  E    + +++++ G  P +  Y+ L +A
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 230/465 (49%), Gaps = 11/465 (2%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW---- 161
           S+ Y S I A   +R  ++A+     M   G  P   T++S     I +C+    W    
Sbjct: 186 SQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSS----AIAACAKVSRWKEAV 241

Query: 162 -LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
            L  S     V+ +V  +   I  C + G    A ++L ++  +G +P+V+ Y+++ID C
Sbjct: 242 GLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDAC 301

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            K G  E A  L  ++   G+VA   TY+++I    K G  ++      +MQ NGV+P +
Sbjct: 302 AKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDV 361

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY+  I     +G+  E   L  EM    V  N ++Y  +I    K  R +EA  LL +
Sbjct: 362 ITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQE 421

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G+ P+VI Y+  ID    A   ++A  L  ++ + G +P+V++YN  I A +K G 
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGR 481

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           SK+A +L+REM   G+ P  +TY+ +I S       E+A +++  MQ+ G +PDV +   
Sbjct: 482 SKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNT 541

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL-RLLGEMNEK 519
            I+     G  +EA  +   M    L P+ + Y   I   C +G+ ++ +  LL EM+  
Sbjct: 542 AINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA-CAKGDRWKEIIDLLREMSTV 600

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           GL P+  SY   +     DG W EA VLL  ML +GL P V  YN
Sbjct: 601 GLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYN 645



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 215/466 (46%), Gaps = 3/466 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S I A  K     +A+     M   GV+P    +++ +    K   ++       E  
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMP 283

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DV ++  +I  C + G    AF +L ++   G   N++ Y+ +I  C K G  E
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWE 343

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L R++ E G+     TY+  I    K G  ++      +M + GV+P+  +Y  +I
Sbjct: 344 EAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVI 403

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+  E   L  EM+   V  +V+ Y+  I    +  R ++A  LL +M   G++
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVI+YN  ID     G +  A  L  ++ ++G +P V+TY+ +I + +     + A DL
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDL 523

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM+ +GITP  V+    I++  +    E+A ++   M   G  PD  +Y   I   C 
Sbjct: 524 FREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA-CA 582

Query: 468 KGN-MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           KG+  KE   L   M    L P+ + Y   +     +G    AL LL +M   GL P++ 
Sbjct: 583 KGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVV 642

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +Y+S I    + G+W EA VLL QM   GL P V+ +N    A  N
Sbjct: 643 TYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGN 688



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 1/457 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A  K    + A+    +M   G+ P   T+++++    K   ++  +    E 
Sbjct: 258 VYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEM 317

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K V  ++ ++ I+I  C + G   +A  +L +++E G +P+V+ Y+S I  C K G  
Sbjct: 318 PTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQW 377

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L R++   G+     +Y ++I    K G  ++  +  ++MQ +GV P +  Y+  
Sbjct: 378 EEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAA 437

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I       +  +   L  EM    +  NV++YN+ I    K  R + A  LL +M   G+
Sbjct: 438 IDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGL 497

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+VITY+ +I       + ++A  LF +++  G +P VV+ N  I A ++ G  + A D
Sbjct: 498 APDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD 557

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ EM   G+ P  ++Y   ID+  + D  ++  ++   M   G +PD  +Y   +    
Sbjct: 558 VLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACS 617

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + G  KEA  L   M    L P+ V YN  I    K G    A  LL +M   GL P++ 
Sbjct: 618 VDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVN 677

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           S+++ I       +W  A  +L +M  LG+ P+ + Y
Sbjct: 678 SFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATY 714



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 21/302 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y + IDA  ++   +QAL+   +M  +G+ P   ++NS +    K+            ++
Sbjct: 434 YSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKT----------GRSK 483

Query: 169 CKVEL-----------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             VEL           DV ++  +I  C       +A ++  +++  G +P+VV   + I
Sbjct: 484 IAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAI 543

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           + C + G  E A  +  ++  +GLV    +Y   I    K    K+  +   +M   G++
Sbjct: 544 NACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLT 603

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P   +Y   +     +G   E   L  +M    ++ +VVTYN+ I    K  R +EA  L
Sbjct: 604 PDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVL 663

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L QM   G++P+V ++N  ID   +  +   A  +  ++++ G SP+  TY   + A  +
Sbjct: 664 LRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKR 723

Query: 398 AG 399
            G
Sbjct: 724 CG 725



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW---LFFS 165
           Y + IDA  K     + +    +M   G+ P + ++     F + +CS D  W   L   
Sbjct: 574 YRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYR----FAMSACSVDGLWKEALVLL 629

Query: 166 ENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +   V L  DV ++   I  C + G   +A  +L Q+   G +P+V  + + ID C   
Sbjct: 630 RDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNG 689

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                A  +  ++  LG+   + TY   +    + G + D  +
Sbjct: 690 DQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 239/466 (51%), Gaps = 8/466 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           Y +++    ++ + ++A+  + Q++ D G  P   T+  +L  + K   F +    W   
Sbjct: 231 YNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N  +   D  ++GILI G C +GD++ A  V + + + G   +V +Y SLI G C+ G
Sbjct: 291 MANNHQA--DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG 348

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTY 283
               A   +   G  G+     TY ++  GL  +G+  +  E  ++++ +   SP   T+
Sbjct: 349 RTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTF 407

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LIH  C  G  +  F++ ++ R+     +V +Y+++I   CK+ R  +A  +   M  
Sbjct: 408 GTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVK 467

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  PN   YN LI+GFC   + + A +++ ++ SNG  P+++TYN LI    KA   + 
Sbjct: 468 DGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQE 527

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           AS L +EM ERG  P   TY  LI    R   ++ A  ++  +  +G   DV  + +LIH
Sbjct: 528 ASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIH 587

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC  G + EA  ++  M E    PN V YN ++ G+ + G+  +A  L   + + GL P
Sbjct: 588 GLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKP 647

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +I +Y++ I  LC   + PE  +LLN++L  G+ P+V  ++IL RA
Sbjct: 648 DIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRA 693



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 233/496 (46%), Gaps = 13/496 (2%)

Query: 80  SSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYF----HQML 133
           S +  P + L     L PS    NP  +S  + +++DA +++R    A  +F    H   
Sbjct: 94  SRALMPDAALAAFRDL-PSLLGCNPGVRS--HNTLLDAFVRARRYSDADAFFASLSHGAF 150

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
              + P   T+N +L  +      D+   LF S  R  V  D  ++  L+ G  +   L+
Sbjct: 151 GRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLD 210

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLVATQHTYTVL 251
            A ++L+++   G   + V Y +L+ GC + G  E+A  ++ + + + G      TY V+
Sbjct: 211 NALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVM 270

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + GL K G  K+  E + +M  N       TY  LIH  C  G V    +++ +M    +
Sbjct: 271 LDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGL 330

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V  YN+LI G C+  R  EA +  D    +GI   + TYN +  G  D+G   +A  
Sbjct: 331 VLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATE 389

Query: 372 LFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           L  QL+++   SP  VT+  LI    + G +  A +++ +    G      +Y+ +I+ F
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +      A E+Y  M K G  P+ + Y  LI+G C    + +A K++  M      P  
Sbjct: 450 CKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTI 509

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN +I G CK      A  L  EM E+G  P+I +Y+S I  LC+D K   A  + ++
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569

Query: 551 MLKLGLKPSVSLYNIL 566
           +L  GL+  V ++NIL
Sbjct: 570 ILDAGLQVDVMVHNIL 585



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 199/407 (48%), Gaps = 1/407 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++N    +  Y  +I    +S   D A   +  M+ +G+    + +NSL+    +     
Sbjct: 292 ANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTG 351

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLI 217
           + W F+          + ++ I+ KG  ++G +++A E+L QLE +   SP+ V + +LI
Sbjct: 352 EAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C+NG   RA  +       G      +Y+ +I    K+G   D  E Y+ M  +G  
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+ + YN LI+ +C   K+++  K++ EM        ++TYNTLI GLCK  + QEA  L
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M   G  P++ TY  LI G C   + D A R+++++   G    V+ +N+LI     
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AG    A  +  EM+E+  +P+ VTY  L+D F     ++KA  +++ +  +G  PD+ T
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           Y   I GLC      E   L N +  T + P  + +++++    K G
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 8/310 (2%)

Query: 249 TVLICGLFKNGLQKDGF--EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +++   F   L  D     F +   L G +P + ++N L+  +    + S+    F  +
Sbjct: 86  ALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASL 145

Query: 307 RH----REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            H    R +A N+ TYN ++  LC    V  A  L   ++  G++P+ +TY+ L+ G   
Sbjct: 146 SHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAK 205

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-EERGITPSEV 421
             + D A  L +++ + G     V YN L+    + G  + A  +  ++  + G +P+  
Sbjct: 206 HDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLA 265

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY +++D   +    ++A E++S M  +    D  TYG+LIHGLC  G++  A+++++ M
Sbjct: 266 TYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  L  +  VYN +I G+C+ G +  A +        G +  I +Y+     L   G  
Sbjct: 326 VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMV 384

Query: 542 PEAEVLLNQM 551
            EA  LL Q+
Sbjct: 385 SEATELLKQL 394



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 1/228 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y ++I+   +    + A+  + +M  +G  P   T+N+L+  + K+  + +      
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   +  + D+ ++  LI+G C    ++ A  + +++ + G   +V+++  LI G C  G
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A  ++ ++ E        TY  L+ G ++ G        +  +  NG+ P + TYN
Sbjct: 594 KVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYN 653

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             I   C+  +  EG  L +E+    +   V+T++ L+  + K   +Q
Sbjct: 654 TRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 419 SEVTYTILIDSFVRS---DDMEKAF-EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           SE    +++ +F R+   D    AF ++ SL+   G +P V ++  L+          +A
Sbjct: 82  SESAALVVLSAFSRALMPDAALAAFRDLPSLL---GCNPGVRSHNTLLDAFVRARRYSDA 138

Query: 475 SKLFNSM----WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
              F S+    +  ++ PN   YN+++   C  G+  RA+ L   +  +G+ P+  +YS+
Sbjct: 139 DAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYST 198

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  L +  +   A  LL++M   G++     YN L
Sbjct: 199 LMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNAL 234


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 233/478 (48%), Gaps = 46/478 (9%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----FSENRCKVELDVYSFGILIKGCC 186
           +ML+SG+RP   TFN+++  +       +  L     F    C    D +++  LI G C
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACP---DTFTYTSLIIGHC 248

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G+L+ AFE+ +++ + G  PN V Y++LI+G C  G +E A  +  ++ + G+  T H
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 247 TYTVLICGL------------------------------FKNGLQKDG-FEF----YEKM 271
            YT+ I  L                                +GL +DG FE     Y KM
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +G+ P+  TY+ LI++   EG+      +F+ M   +   N  TYN +I G C    +
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           Q+A  + DQM  AG SPNVITYN +I  +   G  + A RL   +K NG      TY  L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  FS+ G  + A  L  EM E GI+P+ VTY  +I+ ++    ++ A  ++  M +SG 
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P   TY ++I G      + EA      M +  L PN + Y   I G CK G +  A +
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  EM ++   PN+ +YSS I  LCQ+G+  +AE LL+     G +P+V  Y  L R 
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRG 662



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 242/494 (48%), Gaps = 40/494 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  H K+   D A   F +M+  G  P S T+++L+  +      ++      E  
Sbjct: 240 YTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI 299

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +E  V+++ I I   C+AG   +A ++L ++++ G  PNV  YT+LI G  ++G  E
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  ++ K+   GLV T  TY+ LI  L+  G  +     +E M  +   P+  TYN +I
Sbjct: 360 VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVII 419

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYN---------------------------- 319
             +C+ G + +   +FD+M     + NV+TYN                            
Sbjct: 420 KGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479

Query: 320 -------TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                   LI G  +  +++ A  L ++M   GISPNV+TYN +I+G+    + D A  L
Sbjct: 480 LDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALAL 539

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F ++  +G  PS  TYN++I  FSK      A +   +M ++G+ P+ +TYT  ID   +
Sbjct: 540 FWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCK 599

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     AF+++  M+K  + P++ TY  LI GLC +G  ++A +L +       EPN   
Sbjct: 600 NGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDT 655

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  ++ G C +G  Y A +L+  M +KGL P+   Y + +   C++ +   A  + + M+
Sbjct: 656 YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715

Query: 553 KLGLKPSVSLYNIL 566
             G +P +S Y  L
Sbjct: 716 TTGFQPCLSDYKAL 729



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 211/455 (46%), Gaps = 40/455 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-----WLF 163
           Y ++I    +    + A+  +H+ML  G+ P + T+++L+  +     F+       W+ 
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             ++    E    ++ ++IKG C  G + KA  + +Q+ + G SPNV+ Y  +I    K 
Sbjct: 405 SHDSLPNTE----TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A  L   +   GL     TY  LI G  + G  +  F  + +M  +G+SP++ TY
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTY 520

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N +I+ Y    KV +   LF +M       +  TYN +I G  K  R+ EAE    +M  
Sbjct: 521 NAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVK 580

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK-------------------------- 377
            G+ PNVITY   IDG C  G T  AF++F+++K                          
Sbjct: 581 QGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAED 640

Query: 378 -----SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                 +G  P+V TY  L+R     G    A  LV  M+++G+ PSE  Y  L+    +
Sbjct: 641 AERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCK 700

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           + ++E A +++  M  +GF P +  Y  LI  LC     ++A  +F +M +     ++VV
Sbjct: 701 NLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVV 760

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           + +++ G  KEG +  +L LL  M  +    N  +
Sbjct: 761 WTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 230/505 (45%), Gaps = 35/505 (6%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           S   P+    H+  L  + +N  +  R +  +   H      D + F    ML+  VR R
Sbjct: 70  SHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKH--DMSCFV--SMLNRLVRDR 125

Query: 141 SNT-FNSLLIFVIKSC------------------SFDKGWLFFSENRCKVELDVYSFGIL 181
                +++ I +IKSC                  ++D G+  +S +   ++L  +    L
Sbjct: 126 LFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGL 185

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            +        +   E+LN     G  PN+  + ++I   C  G ++ A+++   I   G 
Sbjct: 186 GR--------DVYIEMLNS----GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGA 233

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TYT LI G  KNG     FE +++M  +G  P+  TY+ LI+  C+EG++ E   
Sbjct: 234 CPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMD 293

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + +EM  + +   V  Y   I  LC   R  EA +LL +MK  G  PNV TY  LI G  
Sbjct: 294 MLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLS 353

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+ + A  +++++ ++G  P+ VTY+ LI      G  + A  +   M      P+  
Sbjct: 354 RDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTE 413

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY ++I  F     ++KA  ++  M K+G SP+V TY ++IH    +G M  A +L   M
Sbjct: 414 TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM 473

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               L+ +   Y  +I G+ + G    A  L  EM E G+ PN+ +Y++ I       K 
Sbjct: 474 KGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKV 533

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A  L  +M++ G  PS   YN++
Sbjct: 534 DDALALFWKMVESGNVPSSGTYNMM 558



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 190/429 (44%), Gaps = 35/429 (8%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S + +  +  Y  II          +A   F QML +G  P   T+N ++    K    +
Sbjct: 405 SHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMN 464

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                    +   ++LD +++  LI G    G L  AF + N++ E G SPNVV Y ++I
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAII 524

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +G      ++ A  LF K+ E G V +  TY ++I G  K     +   F  KM   G+ 
Sbjct: 525 NGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV-------------------------- 311
           P++ TY   I   C  G+ S  FK+F EM+ R+                           
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 312 ---AC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               C  NV TY TL+ GLC + R  EA++L++ MK  G+ P+   Y  L+ G C   E 
Sbjct: 645 LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEV 704

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           + A ++F+ + + G  P +  Y  LI A  KA   + A  + + M ++     EV +T+L
Sbjct: 705 ESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVL 764

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG---NMKEASKLFNSMWE 483
           +D  ++  + + + E+  +M+    + +  T  +L   L   G    + + SK    + E
Sbjct: 765 LDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKE 824

Query: 484 TKLEPNDVV 492
            + +  DV+
Sbjct: 825 KQKQTADVL 833



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 1/279 (0%)

Query: 292 NEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           NEG+V    ++  E+    +    + +++TL+  L K         +  +M  +GI PN+
Sbjct: 143 NEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNL 202

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+N +I   C+ G+  +A  +   +   G  P   TY  LI    K GN  +A ++   
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G  P+ VTY+ LI+       +E+A +M   M   G  P V+ Y + I  LC  G 
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             EA KL   M +    PN   Y  +I G  ++G    A+ +  +M   GLVP   +YS+
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  L  +G++  A  +   ML     P+   YN++ + 
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKG 421


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 242/463 (52%), Gaps = 3/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSE 166
           Y  +I  +L +    + +    +M   G+ P   T++ LL ++ K+  C+ +   +F+  
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT-EARKIFYCM 400

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  ++ +V  +GIL+ G    G +    ++L+ +   G SPN  I+  ++    K   I
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  +F ++ + GL     TY +LI  L K G   D    + +M  +GV+P+   +N L
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C   +  +  +LF EM  + V  NVV +NT++C LC E +V  A+RL+D M+  G+
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNVI+YN LI G C AG TD+A +L + + S G  P +++Y+ L+R + K G    A  
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L REM  +G+TP  VTY+ ++     +    +A E+Y  M KSG   D+YTY ++++GLC
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + EA K+F S+    L PN + + +MI    K G    A+ L   +   GLVPN+ 
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y   +  + Q+G   E + L   M K G  P   + N + R+
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 233/451 (51%), Gaps = 4/451 (0%)

Query: 123 DQALFYFHQMLDSG---VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSF 178
           ++AL   H M + G     P   T+N+++  + K+ + D+          K V+LDV ++
Sbjct: 178 EEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTY 237

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             +I G C+A  +++A  VL  + + G  P+VV Y ++IDG CK   ++RA+ + + + +
Sbjct: 238 STIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID 297

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+     TY  +I GL K           + M    V P + TYNCLIH Y + G+  E
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKE 357

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             +  +EM  R +  +VVTY+ L+  LCK  +  EA ++   M   GI PNV  Y  L+ 
Sbjct: 358 VVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLH 417

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+   G       L + + +NG SP+   +N+++ A++K      A  +   M + G++P
Sbjct: 418 GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             VTY ILID+  +   ++ A   ++ M   G +P+   +  L++GLC     ++A +LF
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             MW+  + PN V +N ++   C EG    A RL+  M   G+ PN+ SY++ IG  C  
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+  EA  LL+ M+ +GLKP +  Y+ L R 
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 229/462 (49%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID   K++  D+A      M+D GV+    T+++++  + K+ + D+         
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ DV ++  +I G C+A  +++A  VL  + + G  P+VV Y ++IDG CK   ++
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 321

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  + + + +  +     TY  LI G    G  K+     E+M   G+ P + TY+ L+
Sbjct: 322 RADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLL 381

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GK +E  K+F  M  + +  NV  Y  L+ G      + +   LLD M   GIS
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN   +N ++  +      D+A  +F+++  +G SP VVTY +LI A  K G    A   
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M   G+TP+ V +  L+      D  EKA E++  M   G  P+V  +  ++  LC 
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G +  A +L +SM    + PN + YN +I G+C  G +  A +LL  M   GL P++ S
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y + +   C+ G+   A  L  +ML+ G+ P    Y+ + + 
Sbjct: 622 YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 231/500 (46%), Gaps = 44/500 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--GWLFFSE 166
           Y +IID   K++  D+A      M+D GV+P   T+N+++  + K+ + D+  G L    
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM---GFSPNVVIYTSLIDGCCKN 223
           ++  V+ D+ ++  LI G    G+     EV+ +LEEM   G  P+VV Y+ L+D  CKN
Sbjct: 332 DK-DVKPDIQTYNCLIHGYLSTGEWK---EVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G    A+ +F  +   G+      Y +L+ G    G   D  +  + M  NG+SP+ Y +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++  Y  +  + E   +F  M    ++ +VVTY  LI  LCK  RV +A    +QM  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G++PN + +N L+ G C     +KA  LF ++   G  P+VV +N ++      G   +
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  ME  G+ P+ ++Y  LI     +   ++A ++  +M   G  PD+ +Y  L+ 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDV-------------------------------- 491
           G C  G +  A  LF  M    + P  V                                
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687

Query: 492 ---VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
               YN+++ G CK      A ++   +  K L PNI +++  I VL + G+  +A  L 
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747

Query: 549 NQMLKLGLKPSVSLYNILYR 568
             +   GL P+V  Y I+ +
Sbjct: 748 ASIPSHGLVPNVVTYCIMMK 767



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 228/491 (46%), Gaps = 48/491 (9%)

Query: 123 DQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKS-CSFDKGWLFFSENR----C--KVELD 174
           D AL  F ++L    RP S   FN LL  V ++ CS          NR    C  KV  D
Sbjct: 31  DDALKLFDELLPHA-RPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLF 233
           + ++ IL    C  G +   F     + + G+  N V+   L++G C    ++ A  +L 
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG---VSPSLYTYNCLIHEY 290
           R++ E G +    +   L+ GL      ++  E    M  +G    +P++ TYN +I   
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C    V     +   M  + V  +VVTY+T+I GLCK   V  AE +L  M   G+ P+V
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS----- 405
           +TYN +IDG C A   D+A  +   +   G  P VVTYN +I    KA     A      
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 406 ---------------------------DLVREMEE---RGITPSEVTYTILIDSFVRSDD 435
                                      ++VR +EE   RG+ P  VTY++L+D   ++  
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
             +A +++  M + G  P+V  YG+L+HG   +G + + + L + M    + PN+ ++N+
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++  Y K+     A+ +   M++ GL P++ +Y   I  LC+ G+  +A +  NQM+  G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509

Query: 556 LKPSVSLYNIL 566
           + P+  ++N L
Sbjct: 510 VTPNSVVFNSL 520



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 235/495 (47%), Gaps = 5/495 (1%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +I G +++  +  + ++  L +++    +P   +  Y  ++D   K+    +A   F+ M
Sbjct: 345 LIHGYLSTGEW--KEVVRRLEEMYARGLDPDVVT--YSLLLDYLCKNGKCTEARKIFYCM 400

Query: 133 LDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
           +  G++P    +  LL  +  +    D   L        +  + Y F I++    +   +
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++A  + +++ + G SP+VV Y  LID  CK G ++ A + F ++   G+      +  L
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + GL      +   E + +M   GV P++  +N ++   CNEG+V    +L D M    V
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NV++YNTLI G C   R  EA +LLD M   G+ P++I+Y+ L+ G+C  G  D A+ 
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF ++   G +P  VTY+ +++          A +L   M + G      TY I+++   
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +++ +++AF+++  +      P++ T+ ++I  L   G  K+A  LF S+    L PN V
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y +M+    +EG       L   M + G  P+    ++ I  L   G+   A   L+++
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820

Query: 552 LKLGLKPSVSLYNIL 566
            ++      S  ++L
Sbjct: 821 DEMNFSLEASTTSLL 835



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 199/424 (46%), Gaps = 3/424 (0%)

Query: 83  FTPRSLLCHLTQLFP-SSSNPVTKSR-LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           +  R  +  LT L     +N ++ +  ++  ++ A+ K  + D+A+  F +M   G+ P 
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+  L+  + K    D   L F++     V  +   F  L+ G C      KA E+  
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G  PNVV + +++   C  G +  A+ L   +  +G+     +Y  LI G    G
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +  +  + M   G+ P L +Y+ L+  YC  G++   + LF EM  + V    VTY+
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           T++ GL    R  EA+ L   M  +G   ++ TYN +++G C     D+AF++F  L S 
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P+++T+ ++I    K G  K A DL   +   G+ P+ VTY I++ + ++   +++ 
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEF 778

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             ++  M+KSG +PD      +I  L  +G +  A    + + E          +++I  
Sbjct: 779 DNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISL 838

Query: 500 YCKE 503
           + +E
Sbjct: 839 FSRE 842



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 168/366 (45%), Gaps = 44/366 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y  +IDA  K    D A+  F+QM++ GV P S  FNSL   V   C+ D+ W     LF
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL---VYGLCTVDR-WEKAEELF 537

Query: 164 F-----------------------------------SENRCKVELDVYSFGILIKGCCEA 188
           F                                   S  R  V  +V S+  LI G C A
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G  ++A ++L+ +  +G  P+++ Y +L+ G CK G I+ A  LFR++   G+     TY
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           + ++ GLF      +  E Y  M  +G    +YTYN +++  C    V E FK+F  +  
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCS 717

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           +++  N++T+  +I  L K  R ++A  L   +   G+ PNV+TY  ++      G  D+
Sbjct: 718 KDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDE 777

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF  ++ +G +P  V  N +IR+    G    A   + +++E   +    T ++LI 
Sbjct: 778 FDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837

Query: 429 SFVRSD 434
            F R +
Sbjct: 838 LFSREE 843


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 240/501 (47%), Gaps = 17/501 (3%)

Query: 86  RSLLCHLTQ--LFP----------SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           RSLL H ++  L P              P      Y ++I A  +      A  Y   M+
Sbjct: 97  RSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMV 156

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
            SG RP + TFNSL++   ++   D     F +   +    D  S+  LI+G CE G ++
Sbjct: 157 RSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVD 216

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A E+  +LE+    P++  + +L+ G C     E    + +K+ ELG       Y  L+
Sbjct: 217 EALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALV 272

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
               +    ++  +   +M  NG+ P   T   +++ YC EG++S   ++F+ M+ +   
Sbjct: 273 DLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE 332

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV TYN ++ G C   +V +A  LLDQM+  G+ P+V+TYN LI G C  G  + AFRL
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              ++ NG +    TYNVLI A  K G    A  L   +E RGI P+ VT+  +I+   +
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
               + A      M  +G +PD YTY   I  LC     +E     + M +  ++P+ V 
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y ++I    KE N   A R+ G+M   G  P++ +Y++++   C +G+  EAE ++ +M 
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 553 KLGLKPSVSLYNILYRAKNNI 573
           K G+      YN L     +I
Sbjct: 573 KGGIIVDAMAYNTLIDGHTSI 593



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 218/479 (45%), Gaps = 19/479 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y +++D   + + +++A    ++M D+G+ P + T  +++    +          F 
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFE 324

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             + K  E +V+++  +++G C  G + KA  +L+Q+ E G  P+VV Y  LI G C +G
Sbjct: 325 SMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  L R +   GL A Q+TY VLI  L K G   +    ++ ++  G+ P+  T+N
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I+  C  GK        ++M     A +  TY+  I  LCK    +E    +D+M   
Sbjct: 445 TVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P+ + Y  +ID          A R++ Q+ S G SP VVTY   +RA+   G    A
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            ++V EM++ GI    + Y  LID        + A  +   M      P+ +T+ +L+  
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRH 624

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDV-----------------VYNMMIFGYCKEGNSY 507
           L  +   ++      S+W+T +E  DV                  Y  ++ G+ +E    
Sbjct: 625 LLQRRLAEDVPLKTTSVWKT-IELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLD 683

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               L+  M E  L  N   Y+S +   C+   +P+A  LL  M+  G  P++  Y  L
Sbjct: 684 EVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYL 742



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 11/307 (3%)

Query: 271 MQLNGVSPSLY------TYNCLIHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLIC 323
           ++L+ +SP         T+  L+  +          +LF  M H    A    TYN LI 
Sbjct: 78  LRLHALSPPPLRPLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIR 137

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC+   ++ A+R L  M  +G  P+  T+N LI G+C   + D A  LF+++   G S 
Sbjct: 138 ALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQ 197

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             V+Y  LI  F + G    A +L RE+E+    P   T+  L+     +   E+   M 
Sbjct: 198 DAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYML 253

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M++ G+ P    Y  L+   C +   +EA K+ N M++  L P  V    ++  YC+E
Sbjct: 254 QKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCRE 313

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A+R+   M  KG  PN+ +Y++ +   C  GK  +A  LL+QM + G++P V  Y
Sbjct: 314 GRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 564 NILYRAK 570
           N+L R +
Sbjct: 374 NLLIRGQ 380



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 52/412 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----- 163
           Y  +IDA  K+   D+A   F  +   G+RP S TFN+++  + K   FD    F     
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467

Query: 164 -------------FSENRCK------------------VELDVYSFGILIKGCCEAGDLN 192
                        F EN CK                  V+    ++ I+I    +  +  
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  +  Q+  +G SP+VV YT+ +   C  G +  A+ +  ++ + G++     Y  LI
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG----------------KV 296
            G    G         + M      P+ +T+  L+                       ++
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           ++ F+LF+ M+   V  +   Y  ++ G  +E R+ E   L+  MK   +  N   Y  L
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ++ FC       A+ L   +  +G  P++++Y  L+  F+  G +  A ++ R +  +  
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEY 767

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
              E+ + I+ID  +R    +   +M S++++    P   TY +L   L  +
Sbjct: 768 NTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTR 819


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/488 (32%), Positives = 232/488 (47%), Gaps = 16/488 (3%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N V    L   +ID   K++ S  AL  F  M  SG+   +  + +LL  + K    D
Sbjct: 37  SKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLD 96

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +      E R    E +V ++  LI G C+  + ++A E+   ++ +  SP++V Y +L+
Sbjct: 97  QALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLL 156

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQH-----------TYTVLICGLFKNGLQKDGFE 266
           DG  + G +ERA  LF+++    L    H           TY+VLI GL K        E
Sbjct: 157 DGLFRTGKLERAMALFQEM----LDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVE 212

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             E M+  G SP + TY  L+   C E KV+  +++  EM       N+VTYN+L+ GLC
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 272

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  RV +A  L+  M   G +PNV+TY  LIDG C  G    A  +   +   G +P ++
Sbjct: 273 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 332

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            YN+LI    KA     +  L+R     GI P  VTY+ +I    RS+ +++A  +   +
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +  G  PDV  Y  LI GLC  G + EA  L+  M     + + V Y+ +I G CK G  
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  LL  M   G  P+  +Y+S I  LC      EA  L+ +M +    PS   YNIL
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512

Query: 567 YRAKNNIE 574
                 +E
Sbjct: 513 IHGMCRME 520



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 226/460 (49%), Gaps = 10/460 (2%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S  V  + +Y +++    K +  DQAL   H+M D G  P   T+NSL+  + K+   D+
Sbjct: 73  SGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132

Query: 160 GWLFFSENRCKVELD--VYSFGILIKGCCEAGDLNKAFEVLNQL-----EEMG--FSPNV 210
               F   +  VE    + ++  L+ G    G L +A  +  ++      +M    SPNV
Sbjct: 133 AQELFEHMK-SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + Y+ LIDG CK   + +A  L   +   G      TYT+L+ GL K       +E   +
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G  P+L TYN L+H  C   +VS+   L  +M  R    NVVTY TLI GLCK  R
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V++A  +L  M   G +P+++ YN LI+G C A + D++  L  +  S G  P VVTY+ 
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I    ++     A  L+  ++ RG  P  + Y+ LID   ++  +++AF++Y +M   G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
              DV TY  LI GLC  G + EA  L   M      P+ + YN +I G C   +   A+
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
            L+ EM      P+  +Y+  I  +C+  +   A VLL Q
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 230/473 (48%), Gaps = 17/473 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S+ID   K+   D+A   F  M      P   T+N+LL  + ++   ++    F E  
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 176

Query: 167 --------NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                   +RC    +V ++ +LI G C+A  +++A E+L  ++  G SP+V+ YT L+D
Sbjct: 177 DRRSHDMDDRCSP--NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 234

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK   +  A  + R++ + G V    TY  L+ GL +     D       M   G +P
Sbjct: 235 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           ++ TY  LI   C  G+V +   +  +M  +    +++ YN LI GLCK  +V E+  LL
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +    GI P+V+TY+ +I G C +   D+A RL   +KS G  P V+ Y+ LI    KA
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A DL   M   G     VTY+ LID   ++  +++A  + + M + G  P   TY
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             LI GLC   ++ EA +L   M  +   P+ V YN++I G C+      A+ LL +   
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534

Query: 519 K-----GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +     G   +  +YSS I  LC+ G+  EA     +M+  G+ P    Y+IL
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSIL 587



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 205/400 (51%), Gaps = 7/400 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY++  L++G C  G++++A    +++      PNV + + LIDG CK      A   F
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R +   G+VA    YT L+ GL+K            +M+ +G  P++ TYN LI   C  
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM------KMAG-I 346
            +     +LF+ M+  E + ++VTYNTL+ GL +  +++ A  L  +M       M    
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPNVITY+ LIDG C A    +A  L   +K+ G SP V+TY +L+    K      A +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++REM + G  P+ VTY  L+    R+  +  A  +   M   G +P+V TYG LI GLC
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +K+A  +   M +    P+ ++YNM+I G CK      ++ LL      G+ P++ 
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +YSS I  LC+  +  EA  LL  +   G  P V LY+ L
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTL 407



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+V  Y +L+ G C+ G+I++A+  F ++    LV      ++LI GL K     D    
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +  MQ +G+      Y  L+     E ++ +   +  EMR      NVVTYN+LI GLCK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-------KSNG 380
                 A+ L + MK    SP+++TYN L+DG    G+ ++A  LF ++         + 
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            SP+V+TY+VLI    KA     A +L+  M+ RG +P  +TYTIL+D   +   +  A+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E+   M  +G  P++ TY  L+HGLC    + +A  L   M      PN V Y  +I G 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G    A  +L +M +KG  P++  Y+  I  LC+  +  E+  LL + +  G+KP V
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 561 SLYN 564
             Y+
Sbjct: 367 VTYS 370



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 6/376 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++D   K      A     +MLD+G  P   T+NSLL  + ++           +  
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C+    +V ++G LI G C+ G +  A  +L  + + G +P+++IY  LI+G CK   ++
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 348

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  L R+    G+     TY+ +I GL ++    +       ++  G  P +  Y+ LI
Sbjct: 349 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 408

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GKV E F L++ M       +VVTY+TLI GLCK  RV EA  LL +M   G  
Sbjct: 409 DGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 468

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TYN LI G CD    D+A  L  +++ +  +PS VTYN+LI    +      A  L
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVL 528

Query: 408 VREMEER-----GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           + + + R     G     + Y+ LID   ++  + +A + +  M  +G  PD  TY +L+
Sbjct: 529 LEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588

Query: 463 HGLCMKGNMKEASKLF 478
            GL    ++ E   L 
Sbjct: 589 EGLKKSKDLHELRHLV 604



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 149/296 (50%), Gaps = 7/296 (2%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P +YTY  L+  +C  G++ +  + FDEMR + +  NV   + LI GLCK  R  +A R 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              M+ +GI  + + Y  L+ G       D+A  + ++++ +G  P+VVTYN LI    K
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM-------QKSG 450
                 A +L   M+    +PS VTY  L+D   R+  +E+A  ++  M           
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            SP+V TY VLI GLC    + +A +L  SM      P+ + Y +++ G CKE     A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +L EM + G VPN+ +Y+S +  LC+  +  +A  L+  M   G  P+V  Y  L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 44/281 (15%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG--WLFFS 165
           +Y  +I+   K+   D+++    + +  G++P   T++S++  + +S   D+    L + 
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           ++R     DV  +  LI G C+AG +++AF++   +   G   +VV Y++LIDG CK G 
Sbjct: 393 KSR-GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGR 451

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A +L  ++  +G   +  TY  LI GL       +  E  E+M+ +  +PS  TYN 
Sbjct: 452 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511

Query: 286 LIHE----------------------------------------YCNEGKVSEGFKLFDE 305
           LIH                                          C  G+V+E    F E
Sbjct: 512 LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQE 571

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERL-LDQMKMAG 345
           M    V  + +TY+ L+ GL K   + E   L LDQM   G
Sbjct: 572 MIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%)

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P+   Y  ++ G+C+ G   +A R   EM  K LVPN+   S  I  LC+  +  +A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
               M   G+     +Y  L
Sbjct: 66  CFRAMQGSGIVADTVIYTAL 85


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 226/429 (52%), Gaps = 5/429 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           +A+  F QM++ G+ P   TFN+L+    ++    +   L        + +DV ++G ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C+ GD   A  +L+++EE    P+VVIY+++ID  CK+G    A+ LF ++ E G+ 
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TY  +I G    G   D       M    ++P + T+N LI     EGK+ E  KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            DEM HR +  + VTYN++I G CK  R  +A+ + D M     SP+V+T+N +ID +C 
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A   D+  +L  ++   G   +  TYN LI  F +  N   A DL +EM   G+ P  +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
             IL+  F  ++ +E+A E++ ++Q S    D   Y ++IHG+C    + EA  LF S+ 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              +EP+   YN+MI G+C +     A  L  +M + G  P+ ++Y++ I    + G+  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 543 EAEVLLNQM 551
           ++  L+++M
Sbjct: 625 KSIELISEM 633



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 208/395 (52%), Gaps = 4/395 (1%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V +F  LI G C  G + +A  ++N++   G   +VV Y ++++G CK GD + A  L  
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E  +      Y+ +I  L K+G   D    + +M   G++P+++TYNC+I  +C+ G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           + S+  +L  +M  RE+  +V+T+N LI    KE ++ EAE+L D+M    I P+ +TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I GFC     D A  +F+ +     SP VVT+N +I  + +A        L+RE+  R
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+  +  TY  LI  F   D++  A +++  M   G  PD  T  +L++G C    ++EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  +  +K++ + V YN++I G CK      A  L   +   G+ P++ +Y+  I  
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C      +A VL ++M   G +P  S YN L R 
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 198/397 (49%), Gaps = 24/397 (6%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++ L++YSF ILIK  C+   L+ +     +L ++GF P+VV + +L+ G C    I  A
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF  + E G +                    +    +++M   G++P + T+N LI+ 
Sbjct: 196 LALFGYMVETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLING 235

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C EG+V E   L ++M  + +  +VVTY T++ G+CK    + A  LL +M+   I P+
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+ Y+ +ID  C  G    A  LF+++   G +P+V TYN +I  F   G    A  L+R
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M ER I P  +T+  LI + V+   + +A ++   M      PD  TY  +I+G C   
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
              +A  +F+ M      P+ V +N +I  YC+       ++LL E++ +GLV N  +Y+
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + I   C+      A+ L  +M+  G+ P     NIL
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 24/346 (6%)

Query: 241 LVATQHTYTVLIC----GLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +V ++  YT + C    G+F    + D     Y KM++  +  ++Y++N LI  +C+  K
Sbjct: 97  MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA---------------ERLLDQ 340
           +S     F ++       +VVT+NTL+ GLC E R+ EA                 L DQ
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G++P VIT+N LI+G C  G   +A  L N++   G    VVTY  ++    K G+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +K A +L+ +MEE  I P  V Y+ +ID   +      A  ++S M + G +P+V+TY  
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G C  G   +A +L   M E ++ P+ + +N +I    KEG  + A +L  EM  + 
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y+S I   C+  ++ +A+     M  L   P V  +N +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTI 438



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 173/354 (48%), Gaps = 11/354 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K      A + F +ML+ G+ P   T+N +   +   CSF    D   L 
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM---IDGFCSFGRWSDAQRLL 354

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 ++  DV +F  LI    + G L +A ++ +++      P+ V Y S+I G CK+
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + AK +F  +    +V    T+  +I    +     +G +   ++   G+  +  TY
Sbjct: 415 NRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LIH +C    ++    LF EM    V  + +T N L+ G C+  +++EA  L + ++M
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  + + YN +I G C   + D+A+ LF  L  +G  P V TYNV+I  F        
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A+ L  +M++ G  P   TY  LI   +++ +++K+ E+ S M+ +GFS D +T
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 44/432 (10%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           +++ M K+   K  S  N  S+    H    + I   ++        H+ AQ L  +++ 
Sbjct: 267 IVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
             I  + FT                        Y  +ID      R SD A      M++
Sbjct: 325 KGIAPNVFT------------------------YNCMIDGFCSFGRWSD-AQRLLRDMIE 359

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
             + P   TFN+L+     S S  +G LF +E  C   L      D  ++  +I G C+ 
Sbjct: 360 REINPDVLTFNALI-----SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK- 413

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
              +  F+    + ++  SP+VV + ++ID  C+   ++    L R+I   GLVA   TY
Sbjct: 414 ---HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  +        + +++M  +GV P   T N L++ +C   K+ E  +LF+ ++ 
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++  + V YN +I G+CK  +V EA  L   + + G+ P+V TYN +I GFC       
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF+++K NG  P   TYN LIR   KAG    + +L+ EM   G +    T  ++ D
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650

Query: 429 SFVRSDDMEKAF 440
             +    ++K+F
Sbjct: 651 -LITDGRLDKSF 661



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 15/289 (5%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +    FD M         V  N +I    +  R   A  L  +M++  I  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK------------- 402
           LI  FCD  +   +   F +L   G  P VVT+N L+                       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 403 --MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  +M E G+TP  +T+  LI+       + +A  + + M   G   DV TYG 
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +++G+C  G+ K A  L + M ET ++P+ V+Y+ +I   CK+G+   A  L  EM EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + PN+ +Y+  I   C  G+W +A+ LL  M++  + P V  +N L  A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 225/427 (52%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + TF +L+  +      +K   F  +   + ++ D  S+G LI G C+ G
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A +++ +++     PNV +Y ++ID  CK   +  A  LF ++   G+ A   TYT
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYT 238

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G       K+      +M L  ++P++YTYN L+   C EGKV E   +   M   
Sbjct: 239 TLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V+TY+TL+ G      +++A+ + + M + G++P+V +Y  LI+GFC     D+A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEA 358

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P +VTY+ LI    K+G      DL+ EM +RGI  + +TY  LID 
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDG 418

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A  +++ M+  G  P  +T+ +L+ GLC  G +K+A + F  +       +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLD 478

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN+MI G+CK+G    AL +L +M E G VPN  ++   I  L +  +  +AE LL 
Sbjct: 479 VYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLR 538

Query: 550 QMLKLGL 556
           QM+  GL
Sbjct: 539 QMICRGL 545



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+  F++ML     P    FN +L    K   +            K ++ D+ +  IL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G +   F VL ++ + G+ P+ + +T+LI G C  G + +A     K+   G+
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q +Y  LI G+ K G  +   +   K+      P++  YN +I   C    VSE + 
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  + ++ +VVTY TLI G C   +++EA  LL++M +  I+PNV TYN L+D  C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  +   +      P V+TY+ L+  +      K A  +   M   G+TP   
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +YTILI+ F ++  +++A  ++  M +    P + TY  LI GLC  G +     L + M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  +  N + YN +I G CK G+  RA+ L  +M ++G+ P   +++  +  LC+ G+ 
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A+     +L  G    V  YN++
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVM 485



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A+  F++M D G+RP S TF  LL  + K          F +  
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   LDVY + ++I G C+ G L +A  +L+++EE G  PN V +  +I+   K  + +
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEND 531

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L R++   GL+
Sbjct: 532 KAEKLLRQMICRGLL 546


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 235/469 (50%), Gaps = 6/469 (1%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           + RL   I+D        D A+  F +M  S  RPR   F+ L   V ++  +D      
Sbjct: 41  RERLRSGIVDIK-----EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +   K +  ++Y+  I+I  CC    L+ AF  + ++ ++G+ P+ V +++LI+G C  
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A  L  ++ E+G   T  T   L+ GL  NG   D     ++M   G  P+  TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             ++   C  G+ +   +L  +M  R++  + V Y+ +I GLCK+  +  A  L ++M++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   ++I Y  LI GFC AG  D   +L   +     +P VV ++ LI  F K G  + 
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L +EM +RGI+P  VTYT LID F + + ++KA  M  LM   G  P++ T+ +LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C    + +  +LF  M    +  + V YN +I G+C+ G    A  L  EM  + + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +I SY   +  LC +G+  +A  +  ++ K  ++  + +YNI+     N
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 229/446 (51%), Gaps = 2/446 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           L+ R+S +AL    +M++ G +P   T N+L+  +  +       L          + + 
Sbjct: 154 LEGRVS-EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++G ++K  C++G    A E+L ++EE     + V Y+ +IDG CK+G ++ A  LF +
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G  A    YT LI G    G   DG +    M    ++P +  ++ LI  +  EGK
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E  +L  EM  R ++ + VTY +LI G CKE ++ +A  +LD M   G  PN+ T+N 
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C A   D    LF ++   G     VTYN LI+ F + G  ++A +L +EM  R 
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  V+Y IL+D    + + EKA E++  ++KS    D+  Y ++IHG+C    + +A 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF S+    ++P+   YN+MI G CK+G+   A  L  +M E G  PN  +Y+  I   
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVS 561
             +G   ++  L+ ++ + G     S
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDAS 598



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 234/479 (48%), Gaps = 28/479 (5%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
           L  ++SD A+    +M+++G +P   T+  +L  + KS   +     L   E R K++LD
Sbjct: 189 LNGKVSD-AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLD 246

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
              + I+I G C+ G L+ AF + N++E  GF  +++IYT+LI G C  G  +    L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            + +  +      ++ LI    K G  ++  E +++M   G+SP   TY  LI  +C E 
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ +   + D M  +    N+ T+N LI G CK   + +   L  +M + G+  + +TYN
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC+ G+ + A  LF ++ S    P +V+Y +L+      G  + A ++  ++E+ 
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +      Y I+I     +  ++ A++++  +   G  PDV TY ++I GLC KG++ EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR----------------------ALRL 512
             LF  M E    PN   YN++I  +  EG++ +                      AL  
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALST 606

Query: 513 LGEMNEKGLVPNIASYSSTIGVLC--QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L  M + G  P++ ++++ +   C  ++    +A  L   M  +G KP+V  YN + + 
Sbjct: 607 LARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKG 665



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 225/468 (48%), Gaps = 25/468 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  IID   K    D A   F++M   G +     + +L+     +  +D G     +  
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + K+  DV +F  LI    + G L +A E+  ++ + G SP+ V YTSLIDG CK   ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +   +   G      T+ +LI G  K  L  DG E + KM L GV     TYN LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  GK+    +LF EM  R V  ++V+Y  L+ GLC     ++A  + ++++ + + 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            ++  YN +I G C+A + D A+ LF  L   G  P V TYN++I    K G+   A  L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS--------------- 452
            R+MEE G +P+  TY ILI + +   D  K+ ++   +++ GFS               
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 453 -------PDVYTYGVLIHGLCMKGN--MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
                  PDV+T+  L+   C++ N  + +A  LF +M     +PN V YN +I G    
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
               +   +L +M E+G  PN  + S+ I  LC+      A +LL +M
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 25/279 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F +M+   VRP   ++  LL  +  +   +K    F +  + K+ELD+  + I+I G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           A  ++ A+++   L   G  P+V  Y  +I G CK G +  A +LFRK+ E G      T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 248 YTVLICGLFKNG-----------LQKDGFEF-----------YEKMQLNGVSPSLYTYNC 285
           Y +LI      G           +++ GF               +M   G  P ++T+  
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTT 624

Query: 286 LIHEYCNE--GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           L+  +C E    V +   LF  M+      NVVTYNT+I GL     + +   +LDQM  
Sbjct: 625 LLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFE 684

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G  PN +T +  I G C       A  L  +++++ + 
Sbjct: 685 RGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNED 723


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 220/398 (55%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +L+V  + +L+   C+ G +++A ++L ++E     P++V Y+ LI G CK G +++A  
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L++++    +      ++ ++ GL + G+  D   +++ + ++ + P +  YN +I  Y 
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G V E  +L+  +R + +  ++VT+N+LI G CK  +V EA RLL+ +K+ G+ P+ +
Sbjct: 443 KLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  L++ +C+ G  +K   L  ++      P+VVTY V+I+   K    + +  L+ +M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +G+ P ++TY  +I  F ++ DM KAFE+   M      P   TY VLI GLC  G++
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A ++  S+ +  +    V Y  MI  +C +G++ RA+++  +M EKG   +I  YS+ 
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC+     EA+     ML  G+ P   ++ ++  A
Sbjct: 683 INRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNA 720



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 235/442 (53%), Gaps = 2/442 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + +I+  + K  L+D A  +F  ML  G+ P + ++N L+  +I + S ++     ++  
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +  ++ D+ ++ I+ KG    G ++ A E++ + L + G  P++V YT LI G C+ G+I
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L R +   G       Y+VL+  L K G   +  +   +M+ N + P L TY+ L
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH  C +GKV +  +L+ EM    +  N   ++ ++ GLC++  + +A    D + M+ +
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+V  YN +IDG+   G+ ++A RL+ +L+    +PS+VT+N LI  F K      A  
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  ++  G+ PS VTYT L++++    ++ K  E+   M      P V TY V+I GLC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +  ++E+ +L   M    L P+ + YN +I  +CK  +  +A  LL +M    L P  A
Sbjct: 548 KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607

Query: 527 SYSSTIGVLCQDGKWPEAEVLL 548
           +Y+  I  LC+ G   +A+ +L
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVL 629



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 232/494 (46%), Gaps = 40/494 (8%)

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           + ++   + SR+   ALF   +M +  +RP   T+NSLL  +  +   D  W  +++ + 
Sbjct: 87  DQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKD 143

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                   +  I++ G C       A   L Q +   F+P+VV + +++   CK G  + 
Sbjct: 144 SGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADV 203

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           AK  F  + + G++   ++Y +LI GL   G  ++  E    M+  G+ P + TY  +  
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 289 EYCNEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
            +   G +S   ++  +M   E +  ++VTY  LICG C+   ++EA RL   +  +G  
Sbjct: 264 GFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ 323

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            NVI Y+ L+   C  G+ D+A +L  ++++N   P +VTY++LI    K G  + A  L
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 408 VREM-------------------EERG----------------ITPSEVTYTILIDSFVR 432
            +EM                    E+G                + P    Y I+ID +V+
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D+E+A  +Y  ++    +P + T+  LI+G C    + EA +L  S+    LEP+ V 
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  ++  YC+EGN  +   LL EMN K + P + +Y+  I  LC+  K  E+  LL  M 
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 553 KLGLKPSVSLYNIL 566
             GL P    YN +
Sbjct: 564 AKGLAPDQITYNTI 577



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 221/420 (52%), Gaps = 5/420 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY  ++ +  K    D+AL   ++M  + ++P   T++ L+  + K     +    + E 
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 167 --NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             NR  +  + ++   ++KG CE G L+ A    + L      P+V +Y  +IDG  K G
Sbjct: 388 CFNR--IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D+E A  L++++ +  +  +  T+  LI G  KN    +     E ++L+G+ PS  TY 
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L++ YC EG +++  +L  EM  +++   VVTY  +I GLCK+ +++E+ +LL+ M+  
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P+ ITYN +I  FC A +  KAF L + +  +   P+  TYNVLI    + G+ + A
Sbjct: 566 GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDA 625

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             ++  +++R I  ++V YT +I +     D ++A +++  M + GF   +  Y  +I+ 
Sbjct: 626 DRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINR 685

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC +  + EA   F  M    + P+  ++ MM+  + + G+ +    LL  M + GL+ +
Sbjct: 686 LCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 222/439 (50%), Gaps = 1/439 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGD 190
           M+   +R   +TFN L+  + K+       L   E     +  D  +F  +++G  E G+
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A  +  Q+ E G     V    LI+G CK G I++A    ++    G    Q TY  
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ GL K G  K   E  + M L G+ P +YTYN LI   C  G++ E  K+ D+M  R+
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
            + N VTYN +I  LCKE RV EA  +   +   GI P+V T+N LI G C +     A 
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF ++K  G  P   TYN+LI +   +   + A +L++EME  G   + V Y  LID F
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++  +E+A E++  M+  G S D  TY  LI GLC    +++A++L + M    L P+ 
Sbjct: 494 CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++  +CK G+  +A  ++  M   G  P+I +Y++ I  LC+ G+   A  LL  
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 551 MLKLGLKPSVSLYNILYRA 569
           +   G+  +   YN + +A
Sbjct: 614 IQMKGMVLTPHAYNPVIQA 632



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 241/514 (46%), Gaps = 18/514 (3%)

Query: 37  RQGLQHTPQSISIILR------------LLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           R+ ++H   + +I+++            L++ +M S+  +  +T    I+ G I   +  
Sbjct: 196 RRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLD 255

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
               +      +      VT + L    I+   K    DQAL +  + +  G RP   T+
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVL----INGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N+L+  + K                  ++ D+Y++  LI G C+ G++ +A ++L+Q+  
Sbjct: 312 NTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVS 371

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
              SPN V Y ++I   CK   ++ A  + R +   G++    T+  LI GL  +   K 
Sbjct: 372 RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             + +E+M+  G  P  +TYN LI   C+  K+ E   L  EM     A NVV YNTLI 
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G CK  R++EAE + D+M++ G+S + +TYN LIDG C +   + A +L +Q+   G  P
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
              TYN L+  F K G+ K A+D+V+ M   G  P  VTY  LI    ++  ++ A  + 
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             +Q  G     + Y  +I  L  +    EA +LF  M +    P+ + Y ++  G C  
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671

Query: 504 GNSY-RALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           G     A+    EM E+G +P  +S+      LC
Sbjct: 672 GGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 220/460 (47%), Gaps = 2/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + +I+  +++    D AL    QM++ G      T N L+    K    D+   F  E  
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +    D +++  L+ G C+ G    A EV++ +   G  P++  Y SLI G CK G+IE
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++          TY  +I  L K     +  E    +   G+ P + T+N LI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C          LF+EM+ +    +  TYN LI  LC   +++EA  LL +M++ G +
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            NV+ YN LIDGFC     ++A  +F++++  G S   VTYN LI    K+   + A+ L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M   G+ P + TY  L+  F ++ D++KA ++   M  SG +PD+ TY  LI GLC 
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++ AS+L  S+    +      YN +I    K   ++ A+RL  EM +K   P+  +
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660

Query: 528 YSSTIGVLCQ-DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y      LC   G   EA     +M++ G  P  S + +L
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVML 700



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 201/435 (46%), Gaps = 20/435 (4%)

Query: 152 IKSCSFDKG-WLFFSENRCKVEL-------------------DVYSFGILIKGCCEAGDL 191
           +  C FD+G +L F E+  K EL                   D   + +L+    +A  L
Sbjct: 125 LSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKL 184

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                  + +       +V  +  LI   CK   +  A ++  ++   GL   + T+T +
Sbjct: 185 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTI 244

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + G  + G         E+M   G   +  T N LI+ +C +G++ +      E      
Sbjct: 245 MQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGF 304

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +  TYNTL+ GLCK    + A  ++D M + G+ P++ TYN LI G C  GE ++A +
Sbjct: 305 RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVK 364

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + +Q+ S   SP+ VTYN +I +  K      A+++ R +  +GI P   T+  LI    
Sbjct: 365 ILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            S + + A +++  M+  G  PD +TY +LI  LC    ++EA  L   M       N V
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +YN +I G+CK      A  +  EM  +G+  +  +Y++ I  LC+  +  +A  L++QM
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544

Query: 552 LKLGLKPSVSLYNIL 566
           +  GL+P    YN L
Sbjct: 545 IMEGLRPDKFTYNSL 559



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 72/291 (24%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           P   T  +LI+      +   A R+FN   K     PS   Y  ++R   KAG+ +    
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 118

Query: 407 LVREME------ERG------------------------------ITPSEVTYTILIDSF 430
           ++ EM+      +RG                              I P    Y +L++  
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN- 489
           V ++ ++     +S M +     DV T+ +LI  LC    ++ A  +   M    L P+ 
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238

Query: 490 ----------------------------------DVVYNMMIFGYCKEGNSYRALRLLGE 515
                                             DV  N++I G+CK+G   +AL  + E
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +G  P+  +Y++ +  LC+ G    A  +++ ML  GL P +  YN L
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSL 349


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 239/494 (48%), Gaps = 41/494 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++    ++   D AL  F  +   G +P + T+ +++  +  +   ++   FF E  
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE-- 359

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
               LDV S+  +IKG  ++  +++A E+  +L+  G SPNVV YT++IDG  K G IE 
Sbjct: 360 ---ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIED 416

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
               F  +     V T+ TYTV+I GL K  +  D  + +E+M   G  P   TY  LI 
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 476

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK--------------------- 327
            +    K+ E  KL D M  +      VTY +++ G CK                     
Sbjct: 477 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 536

Query: 328 --------------EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
                         + R +EA ++L +M   G +P+VI Y  LID     G   +A  +F
Sbjct: 537 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 596

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G +P  +TY  +I+ FSK GN + A +++  M + G+ P    Y  L+D +V+ 
Sbjct: 597 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 656

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE-TKLEPNDVV 492
           + +++AF +Y  M  SG  P+  T+ VL+HGL   G    A  LF  M E  ++ P  V 
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVS 716

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y ++I G  K G    A     EM ++G++P   +Y+S I  L + G+ PEA+ L+  M+
Sbjct: 717 YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 776

Query: 553 KLGLKPSVSLYNIL 566
           KLG+ P V  Y+ L
Sbjct: 777 KLGVNPDVQAYSAL 790



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 219/456 (48%), Gaps = 6/456 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I         D+A  +F+ M+D+G  P    F +L+    K+     G +  ++  
Sbjct: 58  YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL 117

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            +   DV+ +  +I G C+AGDL+  F++L ++   G  P+   Y  LID  CK G ++ 
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++ + G +    T+  LI  L  +G   +  E Y +M   G  P L   + LI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  GKV E  +++  +  ++VA + V YN+L+ G CK  RV +  +LL QM      P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ TYN L+ GF  A   D A  LF  L S G  P+  TY  +I+    A   + A    
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            E  +       ++YT +I     S  +++A E++  ++ +G SP+V  Y  +I GL   
Sbjct: 358 DEALDV------ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++  K F  M  +   P    Y ++I G CK      A ++  +M +KG VP+  +Y
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           ++ I    +  K  EA  LL+ ML  G +P+   Y 
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 198/417 (47%), Gaps = 5/417 (1%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S S+ V     Y  +ID   K+++   A   F QM+  G  P + T+ +L+    K+   
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D+          K  E    ++G ++ G C+   +N+A EV+ Q+ E G  P + I+TSL
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +      G  E A  +  ++   G       YT LI  LF  G   +    ++ M   G 
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           +P   TY  +I  +   G V    ++ + M    V  +   YN+L+ G  K  RV +A  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAF 395
           + D+M  +GI PN +T+N L+ G    G+TD+AF LF + L+ +   P++V+Y +LI   
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            KAG    A    +EM +RGI P   TYT LI S  ++  + +A ++   M K G +PDV
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
             Y  LI GL     +  A  +F  M +    PN+V Y ++  G+   G   RAL L
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG---RALDL 838



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 226/509 (44%), Gaps = 12/509 (2%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS 87
           A  LF   S  G +    + + I++ L          A     L +IS            
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377

Query: 88  LLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
            +    +LF        S N V     Y ++ID  LK+   +  L  F  M  S   P  
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVA----YTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            T+  ++  + K+         F +   K    D  ++  LI G  +A  +++A ++L+ 
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           +   G  P  V Y S++ G CK   I  AK +  ++ E G       +T L+      G 
Sbjct: 494 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 553

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            ++ ++   +M   G +P +  Y  LI    + G+V E   +FD M  +  A + +TY T
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           +I    K   V+ A  +L+ M  +G+ P+   YN L+DG+      D+AF +++++ ++G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTYTILIDSFVRSDDMEKA 439
             P+ VT+NVL+    K G +  A  L +EM E+  + P+ V+YTILID   ++  + +A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F  +  M   G  P+ +TY  LI+ L   G + EA KL   M +  + P+   Y+ +I G
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASY 528
                    A  +  EM ++G  PN  +Y
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTY 822



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 172/364 (47%), Gaps = 1/364 (0%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +A + L ++   G  P+VV    +++G CK   I++A  LF ++  +G   T  +Y  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I GL       + ++F+  M  NG  P +  +  LIH +C  G+   G  L ++   R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +V  Y ++I G CK   +    ++L++M  AG  P+   Y  LID  C  G  D+A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF +++ +G     VT+  LI A S  G    A +L REM ERG  P       LI + 
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++  +++A E+Y  +     +     Y  L+ G C  G + +  KL   M E    P+ 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN+++ G+ +      AL L   ++  G  PN A+Y++ I  L    +  EA+   ++
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 551 MLKL 554
            L +
Sbjct: 360 ALDV 363



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 190/457 (41%), Gaps = 65/457 (14%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +  I++ G C+A  ++KA E+  ++  MG  P +V Y ++I G      ++ A   F
Sbjct: 19  DVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFF 78

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G       +T LI G  K G  + G     +  L    P ++ Y  +IH YC  
Sbjct: 79  NSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRPDVFLYTSVIHGYCKA 137

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +  GFK+ +EM       +   Y  LI  LCK  RV EA  L ++M+ +G   + +T+
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI+   + G+ D+A  L+ ++   G  P +   + LI A  KAG    A+++ + +  
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 414 RGITPSEV-----------------------------------TYTILIDSFVRSDDMEK 438
           + +  S V                                   TY IL+  F R++ ++ 
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDD 317

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGL------------------------CMKG----- 469
           A E++ L+   G  P+  TY  +I GL                         +KG     
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA +LF  +      PN V Y  +I G  K G     L+   +M+    VP   +Y+
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             I  LC+    P+A  +  QM++ G  P    Y  L
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 474



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 1/305 (0%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++  +  ++M   G+ P +   N +++  C   K+ +  +LF EM        +V+YNT+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL    ++ EA +  + M   G  P+VI +  LI GFC AG+      L NQ     +
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P V  Y  +I  + KAG+      ++ EM   G  P    Y +LID   +   +++A+E
Sbjct: 122 -PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M+KSG   D  T+  LI  L   G + EA +L+  M E   EP   V + +IF  C
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G    A  +   +  K +  +  +Y+S +   C+ G+  +   LL QM++    P + 
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300

Query: 562 LYNIL 566
            YNIL
Sbjct: 301 TYNIL 305



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A     ++ + G  P VV  N+++    KA     A +L  EM   G  P+ V+Y  +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I      D M++A++ ++ M  +G  PDV  +  LIHG C  G  +    L N   + + 
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RF 120

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+  +Y  +I GYCK G+     ++L EM   G +P+ A+Y   I  LC+ G+  EA  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNN 572
           L  +M K G       +  L  A +N
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSN 206


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 237/456 (51%), Gaps = 1/456 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           +++A  K R  +  +F+   M   GV     T+N+L+    +    ++ + L  S +   
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E  + ++  ++ G C+ G  ++A +VL ++ ++G +PN   Y +L+   C+  +I  A+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F ++   G++    +++ LI  L +NG        + +M+ +G+ P    Y  LI  +
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +S+  K+ DEM  R    +VVTYNT + GLCK+    +A+ L ++M   G+ P+ 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI G+C  G  DKA  LF  +      P  VTYN LI  F KAG    A +L  +
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  + I P  ++Y  +++ F  S  + +A  +   M + G  P++ T   LI G C  G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M +A +  + M    + P+   YN +I GY KE N  +A  L+ EM ++GL  NI +Y+ 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   C +GK  EAE +L +M+++G+ P  + Y+ L
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 217/417 (52%), Gaps = 1/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +I+    K    D+A     +ML  G+ P + T+N+LL+ + +  +  +    F E +
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  D+ SF  LI      G L +A     ++E  G  P+ VIYT LIDG C+NG + 
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALS 449

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++   G      TY   + GL K  +  D    + +M   G+ P  YT+  LI
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC +G + +   LF+ M    +  + VTYNTLI G CK   +  A+ L D M    I 
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ I+Y  +++GFC +G   +A  L +Q+   G  P++VT N LI+ + ++G+   A + 
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M   GI P   +Y  LID +++  ++EKAF + + M+K G   ++ TY ++++G C 
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +G M+EA ++   M E  + P+   Y+ +I G+  + N   A R   EM ++GLVP+
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 235/452 (51%), Gaps = 1/452 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+A+ +  L ++A    +     G+ P   T+N++L  + K   +D+      E  
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +  ++  L+   C   ++ +A E+ +++   G  P++V ++SLI    +NG + 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A M FR++   G+V     YT+LI G  +NG   D  +  ++M   G    + TYN  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +   ++   LF+EM  R +  +  T+ TLI G CK+  + +A  L + M    + 
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TYN LIDGFC AGE  +A  L++ +      P  ++Y  ++  F  +G    A +L
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M E+GI P+ VT   LI  + RS DM KA+E  S M  +G  PD ++Y  LI G   
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           + N+++A  L N M +  L+ N + YN+++ G+C EG    A ++L +M E G+ P+ A+
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YSS I          EA    ++ML+ GL P 
Sbjct: 715 YSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 232/471 (49%), Gaps = 4/471 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y+ ++  +++++   +    F  +   GV    N  N LL  ++++   D  W  + E 
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +EL+VY+  I++   C+          L+ +E  G   ++V Y +LI+  C+ G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L       G+     TY  ++ GL K G      +   +M   G++P+  TYN L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           + E C    + E  ++FDEM  R V  ++V++++LI  L +   + +A     +M+ +GI
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ + Y  LIDGFC  G    A ++ +++ + G    VVTYN  +    K      A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  EM ERG+ P   T+T LI  + +  +M+KA  ++  M ++   PD  TY  LI G C
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M  A +L++ M    + P+ + Y  ++ G+C  G    AL L  +M EKG+ PN+ 
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           + ++ I   C+ G  P+A   L++M+  G+ P    YN L   Y  + N+E
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 194/363 (53%), Gaps = 1/363 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F +M   GV P   +F+SL+  + ++    +  + F E  R  +  D   + ILI G C 
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A ++ +++   G   +VV Y + ++G CK      A MLF ++ E G+V   +T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +T LI G  K+G        +E M    + P   TYN LI  +C  G++    +L+D+M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +++  + ++Y T++ G C    + EA  L DQM   GI PN++T N LI G+C +G+  
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KA+   +++ SNG  P   +YN LI  + K  N + A  L+ EME+RG+  + +TY +++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F     M++A ++   M + G +PD  TY  LI+G   + NMKEA +  + M +  L 
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 488 PND 490
           P+D
Sbjct: 745 PDD 747



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 190/429 (44%), Gaps = 70/429 (16%)

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           +IY  L+    +   +      F+ +   G+  + +    L+ GL + G     +E Y +
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           +   G+  ++YT N +++  C + K         +M  + V  ++VTYNTLI   C+E  
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V+EA +LL+     G+ P ++TYN ++ G C  G+ D+A  +  ++   G +P+  TYN 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 391 LI-------------RAFSKAGNSKMASDLV----------------------REMEERG 415
           L+               F +     +  DLV                      REME  G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEM--------------------------------- 442
           I P  V YTILID F R+  +  A +M                                 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 443 --YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
             ++ M + G  PD YT+  LI G C  GNM +A  LF +M  T L+P+ V YN +I G+
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G   RA  L  +M  K ++P+  SY + +   C  G  PEA  L +QML+ G++P++
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 561 SLYNILYRA 569
              N L + 
Sbjct: 608 VTCNTLIKG 616


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 237/456 (51%), Gaps = 1/456 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           +++A  K R  +  +F+   M   GV     T+N+L+    +    ++ + L  S +   
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E  + ++  ++ G C+ G  ++A +VL ++ ++G +PN   Y +L+   C+  +I  A+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F ++   G++    +++ LI  L +NG        + +M+ +G+ P    Y  LI  +
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +S+  K+ DEM  R    +VVTYNT + GLCK+    +A+ L ++M   G+ P+ 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI G+C  G  DKA  LF  +      P  VTYN LI  F KAG    A +L  +
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  + I P  ++Y  +++ F  S  + +A  +   M + G  P++ T   LI G C  G+
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M +A +  + M    + P+   YN +I GY KE N  +A  L+ EM ++GL  NI +Y+ 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   C +GK  EAE +L +M+++G+ P  + Y+ L
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 217/417 (52%), Gaps = 1/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +I+    K    D+A     +ML  G+ P + T+N+LL+ + +  +  +    F E +
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  D+ SF  LI      G L +A     ++E  G  P+ VIYT LIDG C+NG + 
Sbjct: 390 RRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALS 449

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++   G      TY   + GL K  +  D    + +M   G+ P  YT+  LI
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC +G + +   LF+ M    +  + VTYNTLI G CK   +  A+ L D M    I 
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ I+Y  +++GFC +G   +A  L +Q+   G  P++VT N LI+ + ++G+   A + 
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M   GI P   +Y  LID +++  ++EKAF + + M+K G   ++ TY ++++G C 
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +G M+EA ++   M E  + P+   Y+ +I G+  + N   A R   EM ++GLVP+
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 239/453 (52%), Gaps = 3/453 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+A+ +  L ++A    +     G+ P   T+N++L  + K   +D+      E  
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +  ++  L+   C   ++ +A E+ +++   G  P++V ++SLI    +NG + 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A M FR++   G+V     YT+LI G  +NG   D  +  ++M   G    + TYN  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +   ++   LF+EM  R +  +  T+ TLI G CK+  + +A  L + M    + 
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TYN LIDGFC AGE  +A  L++ +      P  ++Y  ++  F  +G    A +L
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M E+GI P+ VT   LI  + RS DM KA+E  S M  +G  PD ++Y  LI G   
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           + N+++A  L N M +  L+ N + YN+++ G+C EG    A ++L +M E G+ P+ A+
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 528 YSSTI-GVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YSS I G + QD    EA    ++ML+ GL P 
Sbjct: 715 YSSLINGHVSQD-NMKEAFRFHDEMLQRGLVPD 746



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 257/539 (47%), Gaps = 14/539 (2%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
            +H+  S+S ++  L+        + AQ  IL+++     S      SL+   T  +  S
Sbjct: 131 FKHSSXSLSAMVHFLVR---GRRLSEAQACILRMVRKSGVSRVKVVESLIS--TCFYFGS 185

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
              +     Y+ ++  +++++   +    F  +   GV    N  N LL  ++++   D 
Sbjct: 186 VGLI-----YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W  + E  R  +EL+VY+  I++   C+          L+ +E  G   ++V Y +LI+
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             C+ G +E A  L       G+     TY  ++ GL K G      +   +M   G++P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  TYN L+ E C    + E  ++FDEM  R V  ++V++++LI  L +   + +A    
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M+ +GI P+ + Y  LIDGFC  G    A ++ +++ + G    VVTYN  +    K 
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A  L  EM ERG+ P   T+T LI  + +  +M+KA  ++  M ++   PD  TY
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             LI G C  G M  A +L++ M    + P+ + Y  ++ G+C  G    AL L  +M E
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           KG+ PN+ + ++ I   C+ G  P+A   L++M+  G+ P    YN L   Y  + N+E
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 194/363 (53%), Gaps = 1/363 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F +M   GV P   +F+SL+  + ++    +  + F E  R  +  D   + ILI G C 
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A ++ +++   G   +VV Y + ++G CK      A MLF ++ E G+V   +T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +T LI G  K+G        +E M    + P   TYN LI  +C  G++    +L+D+M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +++  + ++Y T++ G C    + EA  L DQM   GI PN++T N LI G+C +G+  
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KA+   +++ SNG  P   +YN LI  + K  N + A  L+ EME+RG+  + +TY +++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F     M++A ++   M + G +PD  TY  LI+G   + NMKEA +  + M +  L 
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 488 PND 490
           P+D
Sbjct: 745 PDD 747


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 233/458 (50%), Gaps = 35/458 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++++  +  L D+    + +ML+  V P                             
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCP----------------------------- 216

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                ++Y++  ++ G C+ G++ +A + ++ + E G  P+   YTSLI G C+  D++ 
Sbjct: 217 -----NIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F+++   G    +  YT LI GL       +  + + KM+ +   P++ TY  LI 
Sbjct: 272 AFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIK 331

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C   + SE   L  EM  + +  N+ TY  LI  LC + ++++A  LL QM   G+ P
Sbjct: 332 ALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMP 391

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NVITYN LI+G+C  G  + A  +   ++S    P+  TYN LI+ + K  N   A  ++
Sbjct: 392 NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVL 450

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M ER + P  VTY  LID   RS + + A+ + SLM   G  PD +TY  +I  LC  
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             ++EA  LF+S+ +  + PN V+Y  +I GYCK G    A  +L +M  K  +PN  ++
Sbjct: 511 KRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTF 570

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  LC DGK  EA +L  +M+K+ L+P+VS   IL
Sbjct: 571 NALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 232/466 (49%), Gaps = 2/466 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++ + K    ++A  Y   ++++G+ P   T+ SL++   +    D  +  F E  
Sbjct: 221 YNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMP 280

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    +  ++  LI G C    +++A ++  ++++    P V  YT LI   C +    
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKS 340

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L +++ E G+    HTYTVLI  L      +   E   +M   G+ P++ TYN LI
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC  G + +   + + M  R +  N  TYN LI G CK   V +A  +L++M    + 
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVL 459

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+TYN LIDG C +G  D A+RL + +   G  P   TY  +I +  K+   + A DL
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              +E++ + P+ V YT LID + ++  + +A  M   M      P+  T+  LIHGLC 
Sbjct: 520 FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCT 579

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +KEA+ L   M +  L+P      ++I    K+G+   A R   +M   G  P+  +
Sbjct: 580 DGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHT 639

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           Y++ I   C++G+  +AE ++ +M + G+ P +  Y+ L +   ++
Sbjct: 640 YTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDL 685



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 234/481 (48%), Gaps = 27/481 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC----SFDKGWLFF 164
           Y  +ID+       ++A     QML+ G+ P   T+N+L+    K      + D   L  
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S N   +  +  ++  LIKG C+  +++KA  VLN++ E    P+VV Y SLIDG C++G
Sbjct: 421 SRN---LRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + + A  L   + + GLV    TYT +I  L K+   ++  + ++ ++   V P++  Y 
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYT 536

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  YC  GKV+E   + ++M  +    N +T+N LI GLC + +++EA  L ++M   
Sbjct: 537 ALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI 596

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P V T   LI      G+ D A+R F Q+ S+G  P   TY   I+ + + G  + A
Sbjct: 597 DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH- 463
            D+V +M+E G++P   TY+ LI  +        AF +   M  +G  P  +T+  LI  
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716

Query: 464 --------------GLCMKGNMKE---ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                         G+C+  NM E     +L   M E  + PN   Y  ++ G C+ GN 
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776

Query: 507 YRALRLLGEMNEK-GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             A ++   M +K G+ P+   +++ +   C+  K  EA  +++ M+ +G  P +    I
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKI 836

Query: 566 L 566
           L
Sbjct: 837 L 837



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 198/392 (50%), Gaps = 6/392 (1%)

Query: 180 ILIKGCCEAGDLNKAFEV---LNQLEEMGFSPNVVI--YTSLIDGCCKNGDIERAKMLFR 234
           ++IK C    D     ++   +N+ E       ++I  Y +L++   + G ++  K ++ 
Sbjct: 148 LMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E  +    +TY  ++ G  K G  ++  ++   +   G+ P  +TY  LI  YC   
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            +   FK+F EM  +    N V Y  LI GLC E R+ EA  L  +MK     P V TY 
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYT 327

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI   C +    +A  L  +++  G  P++ TY VLI +       + A +L+ +M E+
Sbjct: 328 VLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK 387

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P+ +TY  LI+ + +   +E A ++  LM+     P+  TY  LI G C K N+ +A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKA 446

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             + N M E K+ P+ V YN +I G C+ GN   A RLL  MN++GLVP+  +Y+S I  
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+  +  EA  L + + +  + P+V +Y  L
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 218/489 (44%), Gaps = 56/489 (11%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N    +R Y  +I  + K R   +A+   ++ML+  V P   T+NSL+    +S +FD
Sbjct: 421 SRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 159 KGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             +   S  N   +  D +++  +I   C++  + +A ++ + LE+    PNVV+YT+LI
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI 539

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK G +  A ++  K+     +    T+  LI GL  +G  K+     EKM    + 
Sbjct: 540 DGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ 599

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ T   LIH    +G     ++ F +M       +  TY T I   C+E R+Q+AE +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAF--------------------------- 370
           + +MK  G+SP++ TY+ LI G+ D G T+ AF                           
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719

Query: 371 --------------------------RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
                                      L  ++  +G +P+  +Y  L+    + GN ++A
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779

Query: 405 SDLVREMEER-GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             +   M+++ GI+PSE+ +  L+    + +   +A ++   M   G  P + +  +LI 
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            L  KG  +  + +F ++ +     +++ + ++I G  K+G       L   M + G   
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTF 899

Query: 524 NIASYSSTI 532
           +  +YS  I
Sbjct: 900 SSQTYSLLI 908



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 127/252 (50%)

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YNTL+  L +   V E +++  +M    + PN+ TYNK+++G+C  G  ++A +  + + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  P   TY  LI  + +  +   A  + +EM  +G   +EV YT LI        ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A +++  M+     P V TY VLI  LC      EA  L   M E  ++PN   Y ++I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              C +    +A  LLG+M EKGL+PN+ +Y++ I   C+ G   +A  ++  M    L+
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 558 PSVSLYNILYRA 569
           P+   YN L + 
Sbjct: 426 PNTRTYNELIKG 437



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 22/378 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K+   ++A     +ML     P S TFN+L+  +       +  L   E 
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL-EEK 592

Query: 168 RCKVELD--VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             K++L   V +  ILI    + GD + A+    Q+   G  P+   YT+ I   C+ G 
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A+ +  K+ E G+     TY+ LI G    G     F   ++M   G  PS +T+  
Sbjct: 653 LQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLS 712

Query: 286 LIHEYC--NEGKVSEG----------------FKLFDEMRHREVACNVVTYNTLICGLCK 327
           LI        GKV  G                 +L ++M    V  N  +Y  L+ G+C+
Sbjct: 713 LIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICE 772

Query: 328 EMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
              ++ AE++ D M+   GISP+ + +N L+   C   + ++A ++ + +   G  P + 
Sbjct: 773 IGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLE 832

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           +  +LI    K G  +  + + + + + G    E+ + I+ID   +   +E  +E++++M
Sbjct: 833 SCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVM 892

Query: 447 QKSGFSPDVYTYGVLIHG 464
           +K+G +    TY +LI G
Sbjct: 893 EKNGCTFSSQTYSLLIEG 910


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 235/469 (50%), Gaps = 6/469 (1%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           + RL   I+D        D A+  F +M  S  RPR   F+ L   V ++  +D      
Sbjct: 41  RERLRSGIVDIK-----EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +   K +  ++Y+  I+I  CC    L+ AF  + ++ ++G+ P+ V +++LI+G C  
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A  L  ++ E+G   T  T   L+ GL  NG   D     ++M   G  P+  TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             ++   C  G+ +   +L  +M  R++  + V Y+ +I GLCK+  +  A  L ++M++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   ++I Y  LI GFC AG  D   +L   +     +P VV ++ LI  F K G  + 
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L +EM +RGI+P  VTYT LID F + + ++KA  M  LM   G  P++ T+ +LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C    + +  +LF  M    +  + V YN +I G+C+ G    A  L  EM  + + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +I SY   +  LC +G+  +A  +  ++ K  ++  + +YNI+     N
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 229/446 (51%), Gaps = 2/446 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           L+ R+S +AL    +M++ G +P   T N+L+  +  +       L          + + 
Sbjct: 154 LEGRVS-EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++G ++K  C++G    A E+L ++EE     + V Y+ +IDG CK+G ++ A  LF +
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G  A    YT LI G    G   DG +    M    ++P +  ++ LI  +  EGK
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E  +L  EM  R ++ + VTY +LI G CKE ++ +A  +LD M   G  PN+ T+N 
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C A   D    LF ++   G     VTYN LI+ F + G  ++A +L +EM  R 
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  V+Y IL+D    + + EKA E++  ++KS    D+  Y ++IHG+C    + +A 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF S+    ++P+   YN+MI G CK+G+   A  L  +M E G  PN  +Y+  I   
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVS 561
             +G   ++  L+ ++ + G     S
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDAS 598



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 221/430 (51%), Gaps = 5/430 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
           L  ++SD A+    +M+++G +P   T+  +L  + KS   +     L   E R K++LD
Sbjct: 189 LNGKVSD-AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLD 246

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
              + I+I G C+ G L+ AF + N++E  GF  +++IYT+LI G C  G  +    L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            + +  +      ++ LI    K G  ++  E +++M   G+SP   TY  LI  +C E 
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ +   + D M  +    N+ T+N LI G CK   + +   L  +M + G+  + +TYN
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC+ G+ + A  LF ++ S    P +V+Y +L+      G  + A ++  ++E+ 
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +      Y I+I     +  ++ A++++  +   G  PDV TY ++I GLC KG++ EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E    PN   YN++I  +  EG++ ++ +L+ E+   G   + ++    + +
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606

Query: 535 LCQDGKWPEA 544
           L  DG+  ++
Sbjct: 607 L-SDGRLKKS 615



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 1/289 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++ID  +K     +A     +M+  G+ P + T+ SL+    K    DK         
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    ++ +F ILI G C+A  ++   E+  ++   G   + V Y +LI G C+ G +E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF+++    +     +Y +L+ GL  NG  +   E +EK++ + +   +  YN +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  CN  KV + + LF  +  + V  +V TYN +I GLCK+  + EA+ L  +M+  G S
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           PN  TYN LI      G+  K+ +L  ++K  G S    T  +++   S
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 240/450 (53%), Gaps = 4/450 (0%)

Query: 124 QALFYFH---QMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
           + LF F    + L  G  P + TF++L+  F ++    +   L       K   +V +  
Sbjct: 119 KLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVN 178

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            LI G C  G + +A  +++++ + G   N + Y  +++  CK+G+   A  LFRK+ E 
Sbjct: 179 TLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEER 238

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            + A+   Y+++I  L K+G   D    + +M++ G+   +  Y+ +I   CN+G+  +G
Sbjct: 239 SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDG 298

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            K+  EM  R +  NVVT++ LI    KE ++ EA+ L ++M   GI+P+ ITY+ LIDG
Sbjct: 299 AKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDG 358

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           FC      +A ++ + + S G  P++VTY++LI ++ KA        L  E+  +G+   
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVAD 418

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY  L+  F +S  +  A E++  M   G  P V TYG+L+ GLC  G +++A ++F 
Sbjct: 419 TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFE 478

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M ++++     +YN++I G C       A  L   ++ KG+ P++ +Y+  IG LC+ G
Sbjct: 479 KMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKG 538

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              EA++L  +M + G  PS   YNIL RA
Sbjct: 539 SLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 240/504 (47%), Gaps = 15/504 (2%)

Query: 77  RITSSSFTP-------RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           R+ +S+FT        R  L H + +  S +    K RL   I+D  +     ++A+  F
Sbjct: 5   RLKASNFTQIIDKGTLRISLLHYSCI--SEAKVSYKERLRNGIVDIKV-----NEAIDLF 57

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
             M+ S   P    F+ L   V +   +D    F  E +   +E ++Y+  I+I   C  
Sbjct: 58  ESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRK 117

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
             L  AF V+ +  + GF PN + +++LI+G C  G +  A  L  ++ E+       T 
Sbjct: 118 RKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTV 177

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI GL   G   +     ++M   G   +  TY  +++  C  G  +    LF +M  
Sbjct: 178 NTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEE 237

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R +  +VV Y+ +I  LCK+  + +A  L ++M+M GI  +V+ Y+ +I G C+ G  D 
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDD 297

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
             ++  ++      P+VVT++ LI  F K G    A +L  EM  RGI P  +TY+ LID
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            F + + + +A +M  LM   G  P++ TY +LI+  C    +    +LF  +    L  
Sbjct: 358 GFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V YN ++ G+C+ G    A  L  EM  +G+ P++ +Y   +  LC +G+  +A  + 
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477

Query: 549 NQMLKLGLKPSVSLYNILYRAKNN 572
            +M K  +   + +YNI+     N
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCN 501



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 213/426 (50%), Gaps = 5/426 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDV 175
           LK R++ +AL    +M+  G      T+  +L  + KS +      LF       ++  V
Sbjct: 186 LKGRVT-EALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASV 244

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER-AKMLFR 234
             + I+I   C+ G+L+ A  + N++E  G   +VV Y+S+I G C +G  +  AKML  
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            IG   ++    T++ LI    K G   +  E Y +M   G++P   TY+ LI  +C E 
Sbjct: 305 MIGR-NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ E  ++ D M  +    N+VTY+ LI   CK  RV    RL  ++   G+  + +TYN
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ GFC +G+ + A  LF ++ S G  PSVVTY +L+      G  + A ++  +M++ 
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +      Y I+I     +  ++ A+ ++  +   G  PDV TY V+I GLC KG++ EA
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E    P+D  YN++I  +        ++ L+ EM  +G   + AS    + V
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD-ASTIKMVVV 602

Query: 535 LCQDGK 540
           +  DG+
Sbjct: 603 MLSDGR 608



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++ID  +K     +A   +++M+  G+ P + T++SL+    K     +         
Sbjct: 317 FSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMV 376

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  E ++ ++ ILI   C+A  ++    +  ++   G   + V Y +L+ G C++G + 
Sbjct: 377 SKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLN 436

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF+++   G+  +  TY +L+ GL  NG  +   E +EKMQ + +   +  YN +I
Sbjct: 437 VAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  CN  KV + + LF  +  + V  +V+TYN +I GLCK+  + EA+ L  +MK  G +
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCA 556

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TYN LI           +  L  ++K  G +    T  +++   S     K   D+
Sbjct: 557 PSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTFLDM 616

Query: 408 V 408
           +
Sbjct: 617 L 617


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 226/427 (52%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G  P + T N+L+  +       K   F  +   +  +L+  S+  LI G C+ G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A ++L +++     PNV +Y+++ID  CK   +  A  LF ++   G+ A   TY+
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G    G  K+      +M L  ++P++YTYN L+   C EGKV E   +   M   
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V+TY+TL+ G      V++A+ + + M + G++P+V TY  LI+GFC     D+A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P +VTY+ LI    K+G      DL+ EM +RG     +TY+ LID 
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDG 418

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A  +++ M+     P+++T+ +L+ GLC  G +K+A ++F  +       N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN+MI G+CK+G    AL +L +M + G +PN  ++ + I  L +  +  +AE LL 
Sbjct: 479 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 538

Query: 550 QMLKLGL 556
           QM+  GL
Sbjct: 539 QMIARGL 545



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 3/446 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+  F++ML     P    FN +L    K   +            K ++ D+ +  IL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G +   F VL ++ + G+ P+ V   +LI G C  G +++A     K+   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q +Y  LI G+ K G  +   +   K+      P++  Y+ +I   C    VSE + 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  + ++ +VVTY+TLI G C E +++EA  LL++M +  I+PNV TYN L+D  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  +   +      P V+TY+ L+  +      K A  +   M   G+TP   
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYTILI+ F ++  +++A  ++  M +    P + TY  LI GLC  G +     L + M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 482 WETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            + + +P DV+ Y+ +I G CK G+  RA+ L  +M ++ + PNI +++  +  LC+ G+
Sbjct: 401 RD-RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A+ +   +L  G   +V  YN++
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVM 485



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +A    ++M     +P +I +NK++D F        A  L ++L+  G  P ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F   G       ++ ++ +RG  P  VT   LI        ++KA   +  +   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           F  +  +Y  LI+G+C  G+ + A KL   +     +PN  +Y+ +I   CK      A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  EM  KG+  ++ +YS+ I   C +GK  EA  LLN+M+   + P+V  YNIL  A
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A+  F++M D  +RP   TF  LL  + K          F +  
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   L+VY++ ++I G C+ G L +A  +L+++E+ G  PN   + ++I    K  + +
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEND 531

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L R++   GL+
Sbjct: 532 KAEKLLRQMIARGLL 546


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
           + +A  ++ Q+LD+G+ P +  FN                                  +L
Sbjct: 97  APEACAFYLQLLDAGLPPEAKLFN----------------------------------VL 122

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           ++     G+L  A  V ++++  G    VV + ++I G C+ GD++ A+ L R++ E G+
Sbjct: 123 MRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGV 182

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +TY  LI GL + G  +D    +EKM   G+ P+   +  LI  +C +G      +
Sbjct: 183 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 242

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EMR R V  + VTYN ++ GLC+   ++ A  ++ +M+ AG+ P+ +TY  LIDG+C
Sbjct: 243 LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYC 302

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              E D A  +   + + G     VTY  LI   SKAG S  A  ++ EM E G+ P   
Sbjct: 303 KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 362

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT++ID+F R  D++    +   MQ  G  P V TY V+++G C  G MK A  L N+M
Sbjct: 363 TYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 422

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
               + P+D+ YN+++ G+CK G       L    + KG VP++  Y+S +G
Sbjct: 423 INIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIVG 471



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 168/329 (51%)

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + GL      + VL+  L + G        +++MQ  GV  ++ ++N +I   C  G + 
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L   M    V  +V TY  LI GLC+  R+++A  + ++M   G+ PN + +  LI
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           D  C  G+ +    L  +++  G  P  VTYN ++    +A + K AS +V EM   G+ 
Sbjct: 229 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 288

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  VTYT LID + + ++++ A E+   M   G   D  TY  LI GL   G   +A ++
Sbjct: 289 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 348

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
              M E  LEP++  Y M+I  +C++G+    LRLL EM  KG  P + +Y+  +   C+
Sbjct: 349 LGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCK 408

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G+   A++LLN M+ +G+ P    YNIL
Sbjct: 409 LGQMKNADMLLNAMINIGVSPDDITYNIL 437



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 109/199 (54%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A   + QL   G  P    +NVL+R   + G    A ++  EM+ RG+  + V++  +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R+ D++ A  ++  M ++G +PDVYTYG LI GLC  G +++A  +F  M    ++
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN VV+ ++I  +CK+G++   L L  EM E+G+ P+  +Y++ +  LC+      A  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           + +M   GL+P    Y  L
Sbjct: 279 VVEMRSAGLRPDTVTYTTL 297



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 3/156 (1%)

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI     + T L+  F  + +   A   Y  +  +G  P+   + VL+  L   G +  
Sbjct: 78  RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 134

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F+ M    +    V +N MI G C+ G+   A  L   M+E G+ P++ +Y + I 
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G+  +A  +  +M   G+KP+  ++ IL  A
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 246/494 (49%), Gaps = 43/494 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I+ + K     +A     +M+D  ++P S ++N+LL    +     + +     N C 
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF-----NLCD 426

Query: 171 ------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 +E  V ++  L+KG C  G  + A ++ + + + G +P+ V Y++L+DG  K  
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E A  L++ I   G   ++ T+  +I GL K G   +  E ++KM+  G SP   TY 
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  YC    V + FK+   M    ++ ++  YN+LI GL K  R+ E   LL +M + 
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN++TY  LIDG+C  G  DKAF  + ++  NG S +++  + ++    + G    A
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 405 SDLVREMEERG--------------------------------ITPSEVTYTILIDSFVR 432
           + L+++M + G                                + P+ + Y I I    +
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ++ A   +S++   GF PD +TY  LIHG    GN+ EA +L + M    L PN V 
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G CK  N  RA RL  ++++KGL PN+ +Y++ I   C+ G    A  L ++M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 553 KLGLKPSVSLYNIL 566
           + G+ PSV  Y+ L
Sbjct: 847 EEGISPSVVTYSAL 860



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 234/461 (50%), Gaps = 2/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +++ I+  +++  L+  AL+ F  M   G  P   + NSLL  ++K+         + + 
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +  DV+   I++   C+ G +++A   + ++E +G  PN+V Y SLI+G    GD+
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNC 285
           E AK + + + E G+     TYT+LI G  K     +  +    MQ    + P    Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  YC  GK+ +  +L DEM    +  N+   N+LI G CK   + EAE ++ +M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  +YN L+DG+C  G T +AF L +++   G  P+V+TYN L++   + G    A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M + G+ P EV Y+ L+D   + ++ E A  ++  +   GF+    T+  +I GL
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G M EA ++F+ M +    P+ + Y  +I GYCK  N  +A ++ G M  + + P+I
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI 577

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             Y+S I  L +  +  E   LL +M   GL P++  Y  L
Sbjct: 578 EMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 239/527 (45%), Gaps = 69/527 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+ ++     + A      M + GV     T+  L+    K C  D+        +
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  L  D  ++G+LI G C  G ++ A  +L+++  +G   N+ I  SLI+G CK G+I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +  ++ +  L    ++Y  L+ G  + G   + F   +KM   G+ P++ TYN L
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVV------------------------------ 316
           +   C  G   +  +++  M    VA + V                              
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 317 -----TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                T+NT+I GLCK  ++ EAE + D+MK  G SP+ ITY  LIDG+C A    +AF+
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +   ++    SPS+  YN LI    K+      +DL+ EM  RG+TP+ VTY  LID + 
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE-------- 483
           +   ++KAF  Y  M ++G S ++     ++ GL   G + EA+ L   M +        
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683

Query: 484 ------------------------TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                                   T L PN++VYN+ I G CK G    A R    ++ K
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G VP+  +Y + I      G   EA  L ++ML+ GL P++  YN L
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 233/469 (49%), Gaps = 18/469 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++    +    D AL  +H M+  GV P    +++LL  + K  +F+     + +  
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +       +F  +I G C+ G + +A E+ ++++++G SP+ + Y +LIDG CK  ++ 
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +   +    +  +   Y  LI GLFK+    +  +   +M + G++P++ TY  LI
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C EG + + F  + EM    ++ N++  +T++ GL +  R+ EA  L+ +M   G  
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 348 PNVITYNK------LIDGFCDA-GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           P+   + K       I    D+  E+ K F L          P+ + YN+ I    K G 
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLL----------PNNIVYNIAIAGLCKTGK 729

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A      +  +G  P   TY  LI  +  + ++++AF +   M + G  P++ TY  
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+GLC   N+  A +LF+ + +  L PN V YN +I GYCK GN   A +L  +M E+G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + P++ +YS+ I  LC+ G    +  LLNQM+K G+   +  Y  L + 
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 5/404 (1%)

Query: 104 TKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
           TKSR+ + ++I    K     +A   F +M D G  P   T+ +L+    K+ +  + + 
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +  R  +   +  +  LI G  ++  L +  ++L ++   G +PN+V Y +LIDG C
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +++A   + ++ E GL A     + ++ GL++ G   +     +KM  +G  P   
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD-- 681

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            + C +        + +     DE     +  N + YN  I GLCK  +V +A R    +
Sbjct: 682 -HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + G  P+  TY  LI G+  AG  D+AFRL +++   G  P++VTYN LI    K+ N 
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L  ++ ++G+ P+ VTY  LID + +  +M+ AF++   M + G SP V TY  L
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           I+GLC  G+++ + KL N M +  ++   + Y  ++ G  K  N
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN 904



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 238/558 (42%), Gaps = 78/558 (13%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY-- 109
           R LL K+   SH A   L+ +I                C L  L     N ++K      
Sbjct: 26  RTLLWKLRDESHPAPPELVSRI----------------CRLVLL--RRCNAISKLNFVFS 67

Query: 110 ESIIDAHLKS-RLSDQALFYFHQML--DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           + I+DA L++ RL+  A   F Q +      RP   ++  L+  + +   +D+   + ++
Sbjct: 68  DDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQ 127

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAF--EVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                          +   C+  D       E++    E  FSP V  +  ++    + G
Sbjct: 128 ---------------LVDLCKFKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKG 170

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             + A  +F  +G+ G + +  +   L+  L KNG        Y++M   G+ P ++  +
Sbjct: 171 LTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVS 230

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC--------------------- 323
            +++ +C +GKV E      +M +  V  N+VTY++LI                      
Sbjct: 231 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290

Query: 324 --------------GLCKEMRVQEAERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDK 368
                         G CK+ ++ EAE++L  M+  A + P+   Y  LIDG+C  G+ D 
Sbjct: 291 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDD 350

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RL +++   G   ++   N LI  + K G    A  ++  M +  + P   +Y  L+D
Sbjct: 351 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD 410

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + R     +AF +   M + G  P V TY  L+ GLC  G   +A ++++ M +  + P
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           ++V Y+ ++ G  K  N   A  L  ++  +G   +  ++++ I  LC+ GK  EAE + 
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530

Query: 549 NQMLKLGLKPSVSLYNIL 566
           ++M  LG  P    Y  L
Sbjct: 531 DKMKDLGCSPDGITYRTL 548



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP+++  + ++  Y  +G       +FD M       ++ + N+L+  L K      A  
Sbjct: 155 SPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +  QM   GI P+V   + +++ FC  G+ D+A     ++++ G  P++VTY+ LI  + 
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 272

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDV 455
             G+ + A  +++ M E+G++ + VTYT+LI  + +   M++A ++   MQ+ +   PD 
Sbjct: 273 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             YGVLI G C  G + +A +L + M    L+ N  + N +I GYCK G  + A  ++  
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M +  L P+  SY++ +   C++G   EA  L ++ML+ G++P+V  YN L + 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 446



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 16/228 (7%)

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K     PNV +Y KL+         D+     NQL             V +  F   GN 
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------------VDLCKFKDRGNV 140

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +  +LV    E   +P+   + +++  +V     + A  ++  M K G  P + +   L
Sbjct: 141 -IWDELVGVYREFAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           ++ L   G    A  ++  M    + P+  + ++M+  +CK+G    A   + +M   G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            PNI +Y S I      G    A+ +L  M + G+  +V  Y +L + 
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G  P + T N+L+  +       K   F  +   +  +L+  S+  LI G C+ G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A + L +++     P+VV+Y ++ID  CK   +  A  LF ++   G+ A   TY 
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYN 238

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G    G  K+      +M L  ++P++YTYN L+   C EGKV E   +   M   
Sbjct: 239 TLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V+TY+TL+ G      V++A+ + + M + G++P+V TY  LI+GFC     D+A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P +VTY+ LI    K+G      DL+ EM +RG     +TY+ LID 
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDG 418

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A  +++ M+     P+++T+ +L+ GLC  G +K+A ++F  +       N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN+MI G+CK+G    AL +L +M + G +PN  ++ + I  L +  +  +AE LL 
Sbjct: 479 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 538

Query: 550 QMLKLGL 556
           QM+  GL
Sbjct: 539 QMIARGL 545



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 222/446 (49%), Gaps = 3/446 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+  F++ML     P    FN +L    K   +            K ++ D+ +  IL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G +   F VL ++ + G+ P+ V   +LI G C  G +++A     K+   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q +Y  LI G+ K G  +   +F  K+      P +  YN +I   C    VSE + 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  + ++ +VVTYNTLI G C   +++EA  LL++M +  I+PNV TYN L+D  C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  +   +      P V+TY+ L+  +      K A  +   M   G+TP   
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYTILI+ F ++  +++A  ++  M +    P + TY  LI GLC  G +     L + M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 482 WETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            + + +P DV+ Y+ +I G CK G+  RA+ L  +M ++ + PNI +++  +  LC+ G+
Sbjct: 401 RD-RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +A+ +   +L  G   +V  YN++
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVM 485



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +A    ++M     +P +I +NK++D F        A  L ++L+  G  P ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F   G       ++ ++ +RG  P  VT   LI        ++KA   +  +   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           F  +  +Y  LI+G+C  G+ + A K    +     +P+ V+YN +I   CK      A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  EM  KG+  ++ +Y++ I   C  GK  EA  LLN+M+   + P+V  YNIL  A
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A+  F++M D  +RP   TF  LL  + K          F +  
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   L+VY++ ++I G C+ G L +A  +L+++E+ G  PN   + ++I    K  + +
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEND 531

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L R++   GL+
Sbjct: 532 KAEKLLRQMIARGLL 546


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 238/486 (48%), Gaps = 37/486 (7%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSENRCK 170
           I+  + +  +   AL  F  M   G +P   + NSLL  ++K   S+    ++    R  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  DV++  I++   C+AG + +A E + ++E++GF  N V Y SL+DG    GDIE AK
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-NGVSPSLYTYNCLIHE 289
            + + + E G++  + T T+LI G  K    ++  +   +M+  +GV    Y Y  LI  
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  GK+ +  ++ DEM    +  N+   N+LI G CK  +V E ERLL  M+   + P+
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             +Y  L+DG+C  G + KAF + +Q+   G  P+VVTYN L++   + G+ K A  L  
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M +RG+TP+EV Y  L+D   +  D  +A  ++  +   G +  +Y +  +I+GLC  G
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA-------------------- 509
            M  A + F  M E   +P+ + Y  +  GYCK GN   A                    
Sbjct: 362 EMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYN 421

Query: 510 ---------------LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
                          + LL EM+ +GL PN+ +Y + I   C  G+  +A     +M+  
Sbjct: 422 SLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGK 481

Query: 555 GLKPSV 560
           G  P+V
Sbjct: 482 GFAPNV 487



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 261/542 (48%), Gaps = 20/542 (3%)

Query: 30  SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
           SL N   + G  H  + + + +R L  K  S+S+    TL+       ++S +F     +
Sbjct: 212 SLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC---TLVDGYCRDGLSSKAFN----V 264

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           C   Q+      P   +  Y +++    +      AL  +H ML  GV P    + +LL 
Sbjct: 265 CD--QMLRKGIEPTVVT--YNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLD 320

Query: 150 FVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K   F +    + +   + +   +Y+F  +I G C+ G+++ A E   ++EE+G  P
Sbjct: 321 GLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKP 380

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           + + Y +L DG CK G++E A  +  K+ +  +  +   Y  LI GLF +       +  
Sbjct: 381 DGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLL 440

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +M   G+SP++ TY  LI  +C++G++ + F  + EM  +  A NV+  + ++  L + 
Sbjct: 441 AEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRL 500

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG-ETDKAFRLFNQLKSNG---QSPS 384
            R+ EA  LL +M    +  +++  ++ ++ F +A       +++ + L  +      P+
Sbjct: 501 GRIDEANMLLQKM----VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPN 556

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            V YN+ +    K+G    A      +     TP   TY  LI  F  +  + +AF +  
Sbjct: 557 NVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRD 616

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G  P++ TY  L++GLC  G +  A +LF+ +    L PN V YN++I GYCK G
Sbjct: 617 EMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSG 676

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL L G+M ++G+ P+I +YSS I   C+     EA  LLN+M    +  +++ ++
Sbjct: 677 SPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFS 736

Query: 565 IL 566
            L
Sbjct: 737 KL 738



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 235/565 (41%), Gaps = 107/565 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S++D ++     + A      M + GV     T   L+    K C  ++      E  
Sbjct: 104 YNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREME 163

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V +D Y++G LI G C+ G +  A  V +++ ++G   N+ +  SLI+G CKNG +
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
              + L   + +L L    ++Y  L+ G  ++GL    F   ++M   G+ P++ TYN L
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C  G   +  +L+  M  R V  N V Y TL+ GL K      A  L D +   GI
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA-- 404
           + ++  +N +I+G C  GE D A   F +++  G  P  +TY  L   + K GN + A  
Sbjct: 344 NKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFK 403

Query: 405 ---------------------------------SDLVREMEERGITPSEVTYTILIDSFV 431
                                             DL+ EM+ RG++P+ VTY  LI  + 
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWC 463

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM---------- 481
               ++KAF  Y  M   GF+P+V     ++  L   G + EA+ L   M          
Sbjct: 464 DQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHR 523

Query: 482 ---------------W-------ETKLE---PNDVVYNMMIFGYCKEG--NSYR------ 508
                          W       E+ ++   PN+VVYN+ + G CK G  N  R      
Sbjct: 524 CLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGL 583

Query: 509 ---------------------------ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                                      A  L  EM  KGLVPNI +Y++ +  LC+ G  
Sbjct: 584 SHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYL 643

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L +++   GL P+V  YNIL
Sbjct: 644 DRARRLFDKLHLKGLIPNVVTYNIL 668



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 198/379 (52%), Gaps = 11/379 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ D + K    ++A     +M    + P    +NSL++ +  S    K     +E  
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +V ++G LI G C+ G L+KAF    ++   GF+PNV+I + ++    + G I+
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRID 504

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG-LQK-DGFEFYEKMQLNGVS---PSLYT 282
            A ML +K+ +  LV             F+N  ++K D ++  + +  + +    P+   
Sbjct: 505 EANMLLQKMVDFDLVLDHRCLED-----FQNADIRKLDCWKIADTLDESAIKFSLPNNVV 559

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN  +   C  GKV++  + F  + H     +  TY TLI G      V EA  L D+M 
Sbjct: 560 YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN+ TYN L++G C +G  D+A RLF++L   G  P+VVTYN+LI  + K+G+ +
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A DL  +M + GI+PS +TY+ LI+ F +  D+E+A ++ + M+ S     + T+  L+
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739

Query: 463 HGLCMKGNMKEASKLFNSM 481
            G    G++K+ SKL N M
Sbjct: 740 EGCIQHGDVKKMSKLHNMM 758



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 190/388 (48%), Gaps = 1/388 (0%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +++K   E G +  A  V + + + G  P++    SL+    K G+   A +++ ++  L
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +V    T  +++    K G  +   EF  +M+  G   +  +YN L+  Y + G +   
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLID 358
             +   M  + V  N VT   LI G CK+ +V+EAE++L +M K  G+  +   Y  LID
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+C  G+   A R+ +++   G   ++   N LI  + K G       L+  M +  + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
              +Y  L+D + R     KAF +   M + G  P V TY  L+ GLC  G+ K+A +L+
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           + M +  + PN+V Y  ++ G  K G+  RAL L  ++  +G+  +I ++++ I  LC+ 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+   A+    +M +LG KP    Y  L
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTL 388



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 105/183 (57%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++  LI G   AG +N+AF + +++   G  PN+  Y +L++G CK+G ++RA+ LF
Sbjct: 591 DNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLF 650

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+   GL+    TY +LI G  K+G  ++  +   KM   G+SPS+ TY+ LI+ +C +
Sbjct: 651 DKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQ 710

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V E  KL +EM+   V   + T++ L+ G  +   V++  +L + M MA  S  + ++
Sbjct: 711 SDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSH 770

Query: 354 NKL 356
            ++
Sbjct: 771 KQM 773



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 109/211 (51%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + I + G C++G +N A      L    F+P+   Y +LI G    G +  A  L  ++ 
Sbjct: 560 YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             GLV    TY  L+ GL K+G        ++K+ L G+ P++ TYN LI  YC  G   
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E   L  +M    ++ +++TY++LI G CK+  V+EA +LL++MK + +   + T++KL+
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           +G    G+  K  +L N +     S  + ++
Sbjct: 740 EGCIQHGDVKKMSKLHNMMHMACPSAGITSH 770


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/423 (32%), Positives = 216/423 (51%), Gaps = 11/423 (2%)

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           ++GW  F+E  +    L+  +   L+ G    G+ N+  E++ ++ EM   PNVV +  L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346

Query: 217 IDGCCKNGDIERAKMLFRKIG---ELGLVATQH-----TYTVLICGLFKNGLQKDGFEFY 268
           I+  CK   ++ A  +  K+    E G ++         Y  LI GL K G Q++G    
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406

Query: 269 EKMQ-LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           E+M+   G +P   TYNCLI  +C  G++ +G +LFDEM    VA NVVT NTL+ G+C+
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCR 466

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             RV  A     + +  G+  + +TY  LI+ FC+    +KA  LFN++  +G SP  + 
Sbjct: 467 TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIV 526

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  LI  FS+AG    AS ++ E+++ GI P  V Y  LI  F R++   + FEM   M+
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME 586

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           ++G  PD  TY  LI      G++K A K+   M +  + P    Y  +I  YC  GN  
Sbjct: 587 EAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGN 646

Query: 508 RALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A+ +  +M     V PN   Y+  I  LC++ K   A  L+  M   G+ P+ + YN +
Sbjct: 647 EAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706

Query: 567 YRA 569
           ++ 
Sbjct: 707 FKG 709



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 9/363 (2%)

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI   C+N    R   LF ++ +LG V        L+ GL + G      E  EKM    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE--------VACNVVTYNTLICGLCK 327
           + P++ T+  LI+  C   +V +  ++ ++M   +        V  +VV YNTLI GLCK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 328 EMRVQEAERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
             R QE   L+++M+   G +P+ ITYN LIDGFC AGE +K   LF+++   G +P+VV
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T N L+    + G    A +   E + RG+    VTYT LI++F   ++ EKA E+++ M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            KSG SPD   Y  LI G    G M +AS +   + +  + P+ V YN +I G+C+    
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +R   +L EM E GL P+  +Y++ I    ++G    A+ ++ +M+K G+ P+V+ Y  +
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635

Query: 567 YRA 569
             A
Sbjct: 636 INA 638



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 3/373 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           +Y ++ID   K     + L    +M    G  P + T+N L+    K+   +KG   F E
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDE 444

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N+  V  +V +   L+ G C  G ++ A     + +  G   + V YT+LI+  C   +
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E+A  LF ++ + G       Y  LI G  + G   D      +++  G+ P    YN 
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C   K    F++  EM    +  + +TYNTLI    K   ++ A++++ +M  AG
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMA 404
           + P V TY  +I+ +C  G  ++A  +F  +K+  +  P+ V YN+LI +  K    K A
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L+ +M+  G+TP+  TY  +        D+EK FE    M +   +PD  T  +L   
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEW 744

Query: 465 LCMKGNMKEASKL 477
           L   G ++   K 
Sbjct: 745 LSAVGEIERLKKF 757



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 144/323 (44%), Gaps = 22/323 (6%)

Query: 273 LNGVSPSL---YTYNCLIHEYCNEGKVSEGFKLFDEM--RHREVAC--NVVTYNTLICGL 325
            N + PS+   Y  N  +      G+V +  K+ DEM   + +  C  N  T + L   L
Sbjct: 180 FNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFL 239

Query: 326 CKEMRVQE------AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            K  R +E         L+ +    G+  +     +LI   C   +T++ + LF ++   
Sbjct: 240 LKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKL 299

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID---SFVRSDDM 436
           G        N L+   ++ GN    ++L+ +M E  I P+ VT+ ILI+    F R DD 
Sbjct: 300 GAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDA 359

Query: 437 EKAFEMYSLMQKSG-----FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEPND 490
            +  E  S  ++SG       PDV  Y  LI GLC  G  +E   L   M   K   P+ 
Sbjct: 360 LEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDT 419

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN +I G+CK G   +   L  EMN++G+ PN+ + ++ +G +C+ G+   A     +
Sbjct: 420 ITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVE 479

Query: 551 MLKLGLKPSVSLYNILYRAKNNI 573
             + G+K     Y  L  A  N+
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNV 502


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 261/506 (51%), Gaps = 9/506 (1%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKM------SSHSHAAAQTLILKIISGRITSS 81
           A+ ++    R G+Q    +++I++  L          S  S    + +   +++     +
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           ++  + LL    +L  S S    K  +  Y +II+   K+    +A     +ML  G+ P
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVL 198
            + T+N LL+   ++ +       F E   + V  D+ SF  LI    + G L++A +  
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             ++  G +P+ VIYT LI G C+NG +  A  +  ++ E G V    TY  ++ GL K 
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            +  +  E + +M   GV P  YT+  LI+ Y  +G +++   LF+ M  R +  +VVTY
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 380

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI G CK   +++   L + M    I PN I+Y  LI+G+C+ G   +AFRL++++  
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   +++T N +++ + +AGN+  A + +  M  +GI P  +TY  LI+ F++ ++M++
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 500

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF + + M+ SG  PDV TY V+++G   +G M+EA  +   M E  + P+   Y  +I 
Sbjct: 501 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 560

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPN 524
           G+  + N   A R+  EM ++G VP+
Sbjct: 561 GHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 248/467 (53%), Gaps = 4/467 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           +I+A  K++  +    +   M + GV P   T+N+L+    +    ++ + L  S +   
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++  V+++  +I G C+ G   +A  VL+++ ++G SP+   Y  L+  CC+N ++  A+
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F ++   G+V    +++ LI  L KNG      +++  M+  G++P    Y  LI  +
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +SE  K+ DEM  +    +VVTYNT++ GLCKE  + EA+ L  +M   G+ P+ 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI+G+   G  +KA  LF  +      P VVTYN LI  F K    +  ++L  +
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  R I P+ ++Y ILI+ +     + +AF ++  M + GF   + T   ++ G C  GN
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +A +  ++M    + P+ + YN +I G+ KE N  RA  L+ +M   GL+P++ +Y+ 
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            +    + G+  EAE+++ +M++ G+ P  S Y  L   +  +NN++
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLK 569



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 235/469 (50%), Gaps = 5/469 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            SNP+    +++ ++  ++++R   +    F  +   G+    N  NSLL  ++K    D
Sbjct: 24  GSNPL----VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD 79

Query: 159 KGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             W  + E  R  V+++VY+  I+I   C+   +      L+ +EE G  P+VV Y +LI
Sbjct: 80  LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +  C+ G +E A  L   +   GL     TY  +I GL K G         ++M   G+S
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P   TYN L+ E C    + +  ++FDEM  + V  ++V+++ LI  L K   + +A + 
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              MK AG++P+ + Y  LI GFC  G   +A ++ +++   G    VVTYN ++    K
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
                 A +L  EM ERG+ P   T+T LI+ + +  +M KA  ++ +M +    PDV T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G C    M++ ++L+N M   ++ PN + Y ++I GYC  G    A RL  EM 
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EKG    I + ++ +   C+ G   +A+  L+ ML  G+ P    YN L
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 204/396 (51%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +L++   +A  L +  E    L+  G   ++    SL+ G  K G ++ A  +++++ 
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+    +T  ++I  L KN   ++   F   M+  GV P + TYN LI+ YC +G + 
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E F+L D M  + +   V TYN +I GLCK  +   A+ +LD+M   G+SP+  TYN L+
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C       A R+F+++ S G  P +V+++ LI   SK G    A    R+M+  G+ 
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  V YTILI  F R+  M +A ++   M + G   DV TY  +++GLC +  + EA +L
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M E  + P+   +  +I GY K+GN  +A+ L   M ++ L P++ +Y++ I   C+
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             +  +   L N M+   + P+   Y IL     N+
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 425



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 193/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G  + G ++ A+E+  ++   G   NV     +I+  CKN  IE  K     + E G
Sbjct: 68  LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI    + GL ++ FE  + M   G+ P ++TYN +I+  C  GK     
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 187

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            + DEM    ++ +  TYN L+   C+   + +AER+ D+M   G+ P++++++ LI   
Sbjct: 188 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  D+A + F  +K+ G +P  V Y +LI  F + G    A  +  EM E+G     
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  +++   +   + +A E+++ M + G  PD YT+  LI+G    GNM +A  LF  
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L+P+ V YN +I G+CK     +   L  +M  + + PN  SY   I   C  G 
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  L ++M++ G + ++   N + + 
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKG 456


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 216/423 (51%), Gaps = 1/423 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I  + KS   + A     +ML  G      TF S++  +   C FD   LF  E   +
Sbjct: 342 SLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR 401

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
             + +     +L+ G C+ G  ++A E+  +L E GF+ N V   +LI G C+ G  E A
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L +++ E GLV    +Y  LI    K G  ++GF+  E+M   G+ P +YTYN L+H 
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            CN GK+ E   L+ E +      +  TY  +I G CK  RV+E E+L  +M    I  N
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + Y  LI  +C+ G   +AFRL + ++S G   +  TY+ LI   S  G    A+ L+ 
Sbjct: 582 AVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLD 641

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM + G++P+ V YT LI  + +   M K   +   M  +   P+  TY ++I+G C  G
Sbjct: 642 EMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG 701

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           NMK A+KL N M +  + P+ V YN +  G+CKEG    AL++   M+  G+  +  +Y+
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYT 761

Query: 530 STI 532
           + I
Sbjct: 762 TLI 764



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 232/509 (45%), Gaps = 71/509 (13%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCE 187
           F  + + G+ P   T N LL  ++K+      +  F     C V  DVY F  ++   C 
Sbjct: 150 FSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCT 209

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A E+  ++E++G +PNVV Y ++I G CKNG ++ A     K+ +  +  +  T
Sbjct: 210 GGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVT 269

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y VLI GL K     +     ++M   G +P+   YN LI  YC  G +S   ++ D+M 
Sbjct: 270 YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI 329

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---------------------- 345
              ++ N VT N+LI G CK  +++ AE LL++M   G                      
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389

Query: 346 -------------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
                          PN      L+ G C  G+  +A  L+ +L   G + + VT N LI
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               +AG+ + A+ L++EM ERG+    ++Y  LI +  +   +E+ F++   M + G  
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQ 509

Query: 453 PDVYTYGVLIHGLCMKGNMKEAS-----------------------------------KL 477
           PD+YTY +L+HGLC  G ++EA                                    KL
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M   K+E N VVY  +I  YC+ GN   A RL  +M  +G+    A+YSS I  L  
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G    A  LL++M K GL P+V  Y  L
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTAL 658



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + +      AL     M+ +G+ P S T NSL+    KS   +       E 
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363

Query: 168 RCKVE-LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 ++  +F  +I   C     + A   + ++    F PN  + T L+ G C+NG  
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQ 423

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++ E G  A   T   LI GL + G +++  +  ++M   G+     +YN L
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EGKV EGFKL +EM  R +  ++ TYN L+ GLC   +++EA  L  + K  G 
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  TY  +IDG+C A   ++  +LF ++ +     + V Y  LIRA+ + GN + A  
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M  RGI  +  TY+ LI        ++ A ++   M+K G SP+V  Y  LI G C
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M +   +   M    + PN + Y +MI G+CK GN   A +LL EM +KG+VP+  
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +Y++     C++GK  EA  + + M   G    +SL +I Y
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGG----ISLDDITY 760



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 190/380 (50%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            FE+ + L   G  P++     L+    K  +++ +  +F  +   G+    + ++ ++ 
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                G   D  E + KM+  GV+P++ TYN +IH  C  G++ E F+  ++M    V  
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++VTY  LI GL K  R  EA  +L +M   G +PN + YN LIDG+C  G    A ++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + + SNG SP+ VT N LI+ + K+   + A  L+ EM   G   ++ T+T +I      
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
              + A      M    F P+     +L+ GLC  G   EA +L+  + E     N V  
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G C+ G+   A +LL EM E+GLV +  SY++ I   C++GK  E   L  +M++
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505

Query: 554 LGLKPSVSLYNILYRAKNNI 573
            G++P +  YN+L     N+
Sbjct: 506 RGIQPDMYTYNMLLHGLCNM 525



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 1/228 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID + K+   ++    F +M+   +   +  + +L+    ++ +  + +    + R
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +     ++  LI G    G ++ A ++L+++ + G SPNVV YT+LI G CK G + 
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +   + +++    +   + TYT++I G  K G  K   +   +M   G+ P   TYN L 
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALT 729

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + +C EGK+ E  K+ D M    ++ + +TY TLI G  K + V   E
Sbjct: 730 NGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTVSSRE 777


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 239/462 (51%), Gaps = 1/462 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + +++ ++ A+ + R  D+AL   + M ++ + P++ T NSLL  ++K       W 
Sbjct: 144 VKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWF 203

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            + E  +  ++  + +F I+I   C  G   KA + +  +E  G  PNVV Y ++I+G C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G  E A  +F+ + +  L    +TY   I  L K    ++      K+  +G+ P+  
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN LI   CN+G + + F   DEM +R +  +V TYN LI  L  E R++EAE ++ +M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G+ P+V+TYN  I+G+C  G   KA  LF+++      P+V TY  LI  F K    
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A +  ++  + G+ P  + +  LID    + ++++AF++   M  +   PD  T+  L
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + G C +  ++EA KL + M E  ++P+ + YN +I GY K G+   AL +  EM   G 
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
            P + +Y++ I    + G+   AE LL +M   G+ P  S Y
Sbjct: 564 DPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 227/447 (50%), Gaps = 36/447 (8%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L  + NR  V+  +  F +L+   C+    ++A E LN ++E    P      SL+    
Sbjct: 135 LSLARNRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLL 193

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K   I+ A  ++ ++ ++ + ++  T+ ++I  L + G  K   +F   M++ GV P++ 
Sbjct: 194 KLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVV 253

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN +I+ YC  GK     K+F  M+ + +  +  TYN+ I  LCKE R++EA  +L ++
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAF------------------------------- 370
             +G+ PN +TYN LIDG C+ G+ DKAF                               
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRI 373

Query: 371 ----RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
                +  +++  G  P VVTYN+ I  + + GN+K A  L  EM E+ I P+  TYT L
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID F + + M +A E +    K G  PD+  +  LI G C+ GN+  A +L   M   K+
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKV 493

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P++V +N ++ GYC+E     A +LL EM E+G+ P+  SY++ I    + G   +A  
Sbjct: 494 VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALE 553

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           + ++ML LG  P++  YN L +  + I
Sbjct: 554 VFDEMLSLGFDPTLLTYNALIQGYSKI 580



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 187/330 (56%), Gaps = 3/330 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S I    K R  ++A     ++L+SG+ P + T+N+L+         DK + +  E  
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM 349

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR  V   V+++ +LI        + +A +++ ++ E G  P+VV Y   I+G C+ G+ 
Sbjct: 350 NRGIVA-SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNA 408

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A  LF ++ E  +  T  TYT LI    K     +  E ++K    G+ P +  +N L
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNAL 468

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C  G +   F+L  EM + +V  + VT+NTL+ G C+E +V+EA++LLD+MK  GI
Sbjct: 469 IDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI 528

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ I+YN LI G+   G+   A  +F+++ S G  P+++TYN LI+ +SK G +  A +
Sbjct: 529 KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEE 588

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDM 436
           L+REM+ +GITP + TY  +I++   +DD+
Sbjct: 589 LLREMQSKGITPDDSTYLYVIEAMKTNDDL 618



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 150/308 (48%), Gaps = 6/308 (1%)

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           +LC L +     S  V  +  Y ++ID        D+A  Y  +M++ G+     T+N L
Sbjct: 309 VLCKLLE-----SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLL 363

Query: 148 LIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           +  +      ++      E R K VE DV ++ I I G C  G+  KA  + +++ E   
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI 423

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P V  YTSLID   K   +  A+  F+K  + G++     +  LI G   NG     F+
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             ++M    V P   T+N L+  YC E KV E  KL DEM+ R +  + ++YNTLI G  
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K   +++A  + D+M   G  P ++TYN LI G+   GE D A  L  +++S G +P   
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDS 603

Query: 387 TYNVLIRA 394
           TY  +I A
Sbjct: 604 TYLYVIEA 611


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 227/434 (52%), Gaps = 5/434 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           +A+  F QM++ G+ P   TFN+L+    ++    +   L        + +DV ++G ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C+ GD   A  +L+++EE    P+VVIY+++ID  CK+G    A+ LF ++ E G+ 
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TY  +I G    G   D       M    ++P + T+N LI     EGK+ E  KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            DEM HR +  + VTYN++I G CK  R  +A+ + D M     SP+V+T+N +ID +C 
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A   D+  +L  ++   G   +  TYN LI  F +  N   A DL +EM   G+ P  +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
             IL+  F  ++ +E+A E++ ++Q S    D   Y ++IHG+C    + EA  LF S+ 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              +EP+   YN+MI G+C +     A  L  +M + G  P+ ++Y++ I    + G+  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 543 EAEVLLNQMLKLGL 556
           ++  L+++M   G 
Sbjct: 625 KSIELISEMRSNGF 638



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 208/395 (52%), Gaps = 4/395 (1%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V +F  LI G C  G + +A  ++N++   G   +VV Y ++++G CK GD + A  L  
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E  +      Y+ +I  L K+G   D    + +M   G++P+++TYNC+I  +C+ G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           + S+  +L  +M  RE+  +V+T+N LI    KE ++ EAE+L D+M    I P+ +TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I GFC     D A  +F+ +     SP VVT+N +I  + +A        L+RE+  R
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+  +  TY  LI  F   D++  A +++  M   G  PD  T  +L++G C    ++EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  +  +K++ + V YN++I G CK      A  L   +   G+ P++ +Y+  I  
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C      +A VL ++M   G +P  S YN L R 
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 198/397 (49%), Gaps = 24/397 (6%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++ L++YSF ILIK  C+   L+ +     +L ++GF P+VV + +L+ G C    I  A
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF  + E G +                    +    +++M   G++P + T+N LI+ 
Sbjct: 196 LALFGYMVETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLING 235

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C EG+V E   L ++M  + +  +VVTY T++ G+CK    + A  LL +M+   I P+
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+ Y+ +ID  C  G    A  LF+++   G +P+V TYN +I  F   G    A  L+R
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M ER I P  +T+  LI + V+   + +A ++   M      PD  TY  +I+G C   
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
              +A  +F+ M      P+ V +N +I  YC+       ++LL E++ +GLV N  +Y+
Sbjct: 416 RFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + I   C+      A+ L  +M+  G+ P     NIL
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 24/346 (6%)

Query: 241 LVATQHTYTVLIC----GLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +V ++  YT + C    G+F    + D     Y KM++  +  ++Y++N LI  +C+  K
Sbjct: 97  MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA---------------ERLLDQ 340
           +S     F ++       +VVT+NTL+ GLC E R+ EA                 L DQ
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G++P VIT+N LI+G C  G   +A  L N++   G    VVTY  ++    K G+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +K A +L+ +MEE  I P  V Y+ +ID   +      A  ++S M + G +P+V+TY  
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G C  G   +A +L   M E ++ P+ + +N +I    KEG  + A +L  EM  + 
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y+S I   C+  ++ +A+     M  L   P V  +N +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTI 438



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 198/452 (43%), Gaps = 44/452 (9%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           +++ M K+   K  S  N  S+    H    + I   ++        H+ AQ L  +++ 
Sbjct: 267 IVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
             I  + FT                        Y  +ID      R SD A      M++
Sbjct: 325 KGIAPNVFT------------------------YNCMIDGFCSFGRWSD-AQRLLRDMIE 359

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
             + P   TFN+L+     S S  +G LF +E  C   L      D  ++  +I G C+ 
Sbjct: 360 REINPDVLTFNALI-----SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
              + A  + + +     SP+VV + ++ID  C+   ++    L R+I   GLVA   TY
Sbjct: 415 NRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  +        + +++M  +GV P   T N L++ +C   K+ E  +LF+ ++ 
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++  + V YN +I G+CK  +V EA  L   + + G+ P+V TYN +I GFC       
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF+++K NG  P   TYN LIR   KAG    + +L+ EM   G +    T  +  +
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEE 650

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              R  D E+  E Y   + +G +  +  Y V
Sbjct: 651 IICRVSD-EEIIENYLRPKINGETSSIPRYVV 681



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 15/289 (5%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +    FD M         V  N +I    +  R   A  L  +M++  I  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK------------- 402
           LI  FCD  +   +   F +L   G  P VVT+N L+                       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 403 --MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  +M E G+TP  +T+  LI+       + +A  + + M   G   DV TYG 
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +++G+C  G+ K A  L + M ET ++P+ V+Y+ +I   CK+G+   A  L  EM EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + PN+ +Y+  I   C  G+W +A+ LL  M++  + P V  +N L  A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 205/393 (52%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +   LI+G C +G   KA  ++  LE  G  P+V+ Y  LI G CK+G+I++A  + 
Sbjct: 140 DVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL 199

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +   + +     TY  ++  L  +G  K+  E  ++       P + TY  LI   CN+
Sbjct: 200 ER---MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCND 256

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KL DEMR +    +VVTYN LI G+CKE R+ EA + L+ M   G  PNVIT+
Sbjct: 257 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A RL + +   G SPSVVT+N+LI    +      A D++ +M +
Sbjct: 317 NIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P+ ++Y  L+  F +   M++A E   +M   G  PD+ TY  L+  LC  G +  
Sbjct: 377 HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G +  A+ LL EM  KGL P+I +YS+ + 
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L ++GK  EA  + + M  L +KPS   YN +
Sbjct: 497 GLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAI 529



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 202/381 (53%), Gaps = 3/381 (0%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+L +  + L ++   G  P+V+  TSLI G C++G  ++A  +   +   G V    TY
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            VLI G  K+G      E  E+M    V+P + TYN ++   C+ GK+ E  ++ D    
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           RE   +V+TY  LI   C +  V +A +LLD+M+  G  P+V+TYN LI+G C  G  D+
Sbjct: 237 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A +  N + S G  P+V+T+N+++R+    G    A  L+ +M  +G +PS VT+ ILI+
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R   + +A ++   M K G  P+  +Y  L+HG C +  M  A +    M      P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V YN ++   CK+G    A+ +L +++ KG  P + +Y++ I  L + GK   A  LL
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
            +M + GLKP +  Y+ L R 
Sbjct: 477 EEMRRKGLKPDIITYSTLLRG 497



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 216/422 (51%), Gaps = 2/422 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    +S  + +A      + +SG  P   T+N L+    KS   DK        R  
Sbjct: 146 SLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL--ERMS 203

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV ++  +++  C++G L +A EVL++  +    P+V+ YT LI+  C +  + +A 
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY VLI G+ K G   +  +F   M   G  P++ T+N ++   
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+  +  +L  +M  +  + +VVT+N LI  LC++  +  A  +L++M   G  PN 
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+ GFC   + D+A      + S G  P +VTYN L+ A  K G    A +++ +
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G +P  +TY  +ID   +    E A E+   M++ G  PD+ TY  L+ GL  +G 
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA K+F+ M    ++P+ V YN ++ G CK   + RA+  L  M EKG  P  A+Y+ 
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 531 TI 532
            I
Sbjct: 564 LI 565



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 160/315 (50%), Gaps = 3/315 (0%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L +NG  ++G +F E+M   G  P +     LI  +C  GK  +  ++ + + +     +
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN LI G CK   + +A  +L++M +A   P+V+TYN ++   CD+G+  +A  + +
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +       P V+TY +LI A         A  L+ EM ++G  P  VTY +LI+   +  
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A +  + M   G  P+V T+ +++  +C  G   +A +L + M      P+ V +N
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I   C++    RA+ +L +M + G VPN  SY+  +   CQ+ K   A   L  M+  
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 555 GLKPSVSLYNILYRA 569
           G  P +  YN L  A
Sbjct: 413 GCYPDIVTYNTLLTA 427



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 34/357 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+A        QA+    +M   G +P   T+N                       
Sbjct: 246 YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN----------------------- 282

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      +LI G C+ G L++A + LN +   G  PNV+ +  ++   C  G    
Sbjct: 283 -----------VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMD 331

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ L   +   G   +  T+ +LI  L +  L     +  EKM  +G  P+  +YN L+H
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C E K+    +  + M  R    ++VTYNTL+  LCK+ +V  A  +L+Q+   G SP
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +ITYN +IDG    G+T+ A  L  +++  G  P ++TY+ L+R   + G    A  + 
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +ME   I PS VTY  ++    ++    +A +  + M + G  P   TY +LI G+
Sbjct: 512 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 3/153 (1%)

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           E    I +   VR+ ++E+  +    M   G  PDV     LI G C  G  K+A+++  
Sbjct: 106 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            +  +   P+ + YN++I GYCK G   +AL +L  M+   + P++ +Y++ +  LC  G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSG 222

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           K  EA  +L++ L+    P V  Y IL  A  N
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 34/223 (15%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S  Y  ++    + +  D+A+ Y   M+  G  P   T+N+LL  +           
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL----------- 428

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                                  C+ G ++ A E+LNQL   G SP ++ Y ++IDG  K
Sbjct: 429 -----------------------CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G  E A  L  ++   GL     TY+ L+ GL + G   +  + +  M+   + PS  T
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           YN ++   C   + S        M  +       TY  LI G+
Sbjct: 526 YNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 248/494 (50%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    +S   ++A  +  +M+D G+ P + T+ +L+  + K     +      E  
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C  ++ +V  +  L+ G  + G   +AF++LN++   G  PN ++Y +LI G CK G + 
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  ++ ++G      TY  L+ G F++  +   FE   +M+ +G+ P+ YTY  +I
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462

Query: 288 HEYCNEGKVSEGFKLFDEM----------------------RHREVAC------------ 313
           +  C  G+  E   L +EM                       H  +AC            
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++  YN+LI GL    R++EAE    Q++  G+ P+  TY+ LI G+C     +KA +L
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             Q+ ++G  P+  TY  L+  + K+ + +  S +++ M   G  P    Y I+I +  R
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           S++ME AF + + ++K+G  PD++ Y  LI GLC   +M++A  L + M +  LEP  V 
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G+C+ G+  RA  +   +  KGL+PN  +Y++ I   C++G   +A  L   ML
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762

Query: 553 KLGLKPSVSLYNIL 566
             G+ P   +YN+L
Sbjct: 763 DRGIAPDAFVYNVL 776



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 229/465 (49%), Gaps = 3/465 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF-- 163
           + + + ++D + K+     A      M D G+ P     N LL  ++++ + +  W    
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F E    +  DVY++   ++  C+A D + A +V  ++     + N V Y  +I G C++
Sbjct: 235 FMEG-AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 293

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +E A     ++ + GL     TY  L+ GL K G  K+     ++M  +G+ P++  Y
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             L+  +  EGK +E F + +EM    V  N + Y+ LI GLCK  ++  A +LL++M  
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  P+  TY+ L+ G     + D AF L N+++++G  P+  TY ++I    + G SK 
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE 473

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L+ EM   G+ P+   Y  LI    +   +  A E    M K+   PD++ Y  LI 
Sbjct: 474 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIK 533

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL   G ++EA + +  + +  L P++  Y+ +I GYCK  N  +A +LL +M   GL P
Sbjct: 534 GLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKP 593

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           N  +Y+  +    +     +   +L  ML  G KP   +Y I+ R
Sbjct: 594 NADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIR 638



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 227/514 (44%), Gaps = 70/514 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++D  +K   + +A    ++M+ +GV+P    +++L+  + K     +     +E 
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +     D +++  L++G  +  D + AFE+LN++   G  PN   Y  +I+G C+NG+ 
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  ++   GL      Y  LI G  K G      E  E M    V P L+ YN L
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSL 531

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G++ E  + + +++ R +  +  TY+ LI G CK   +++A++LL QM  +G+
Sbjct: 532 IKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591

Query: 347 SPNVITYNKLIDGFCDAGETDK-----------------------------------AFR 371
            PN  TY  L++G+  + + +K                                   AF 
Sbjct: 592 KPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 651

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +  +++ NG  P +  Y+ LI    K  + + A  L+ EM + G+ P  V Y  LID F 
Sbjct: 652 VLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 711

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           RS D+ +A  ++  +   G  P+  TY  LI G C  G++ +A  L+  M +  + P+  
Sbjct: 712 RSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771

Query: 492 VYNMM----------------------------------IFGYCKEGNSYRALRLLGEMN 517
           VYN++                                  + G+CK G      +LL  M 
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMM 831

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           ++ +VPN  +  + I    + GK  EA  +  ++
Sbjct: 832 DREIVPNAQTVENVITEFGKAGKLCEAHRVFAEL 865



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 217/454 (47%), Gaps = 2/454 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y+++I    K     +A    ++M+  G RP + T++ L+    +    D  +   +E 
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   +  + Y++GI+I G C+ G+  +A  +L ++   G  PN  +Y  LI G  K G I
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A      + +  ++     Y  LI GL   G  ++  E+Y ++Q  G+ P  +TY+ L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH YC    + +  +L  +M +  +  N  TY  L+ G  K    ++   +L  M  +G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  +I     +   + AF +  +++ NG  P +  Y+ LI    K  + + A  
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM + G+ P  V Y  LID F RS D+ +A  ++  +   G  P+  TY  LI G C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++ +A  L+  M +  + P+  VYN++  G     +  +AL L  EM  +G   +++
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVS 805

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            +S+ +   C+ G+  E E LL+ M+   + P+ 
Sbjct: 806 LFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNA 839



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 209/429 (48%), Gaps = 17/429 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +I+   ++  S +A     +M+  G++P +  +  L+I   K     +G +  +   
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK-----EGHISLACES 512

Query: 166 -ENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            EN  K  +  D++ +  LIKG    G + +A E   Q+++ G  P+   Y+ LI G CK
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 572

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             ++E+A  L +++   GL     TYT L+ G FK+   +      + M  +G  P  + 
Sbjct: 573 TRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHI 632

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  +I        +   F +  E+    +  ++  Y++LI GLCK   +++A  LLD+M 
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P ++ YN LIDGFC +G+  +A  +F+ + + G  P+ VTY  LI    K G+  
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A DL ++M +RGI P    Y +L      + D+E+A  +   M   G++  V  +  L+
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLV 811

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C +G ++E  KL + M + ++ PN      +I  + K G    A R+  E+ +K   
Sbjct: 812 RGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK-- 869

Query: 523 PNIASYSST 531
              AS SST
Sbjct: 870 ---ASQSST 875



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 153/294 (52%), Gaps = 4/294 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+  S   P   +  Y  +++ + KS   ++       ML SG +P ++ +  ++  +
Sbjct: 583 LQQMLNSGLKP--NADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +S + +  ++  +E  +  +  D++ +  LI G C+  D+ KA  +L+++ + G  P +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y +LIDG C++GDI RA+ +F  I   GL+    TYT LI G  KNG   D F+ Y+ 
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKD 760

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G++P  + YN L     +   + +   L +EM +R  A +V  ++TL+ G CK  R
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGR 819

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           +QE E+LL  M    I PN  T   +I  F  AG+  +A R+F +L+    S S
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQS 873


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 224/429 (52%), Gaps = 5/429 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F QM++ G+ P   TFN+L+    ++    +   L        + +DV ++G ++ G C+
Sbjct: 209 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 268

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            GD   A  +L+++EE    P+VVIY+++ID  CK+G    A+ LF ++ E G+     T
Sbjct: 269 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 328

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  +I G    G   D       M    ++P + T+N LI     EGK+ E  KL DEM 
Sbjct: 329 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 388

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           HR +  + VTYN++I G CK  R  +A+ + D M     SP+V+T+N +ID +C A   D
Sbjct: 389 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD 444

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +  +L  ++   G   +  TYN LI  F +  N   A DL +EM   G+ P  +T  IL+
Sbjct: 445 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 504

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
             F  ++ +E+A E++ ++Q S    D   Y ++IHG+C    + EA  LF S+    +E
Sbjct: 505 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 564

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   YN+MI G+C +     A  L  +M + G  P+ ++Y++ I    + G+  ++  L
Sbjct: 565 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 624

Query: 548 LNQMLKLGL 556
           +++M   G 
Sbjct: 625 ISEMRSNGF 633



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 228/456 (50%), Gaps = 15/456 (3%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLL-----------IFVIKSCSFDKGWLFFSENRCKVEL 173
           +L  F ++   G +P   TFN+LL              +     + G LF       +  
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            V +F  LI G C  G + +A  ++N++   G   +VV Y ++++G CK GD + A  L 
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+ E  +      Y+ +I  L K+G   D    + +M   G++P+++TYNC+I  +C+ 
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  RE+  +V+T+N LI    KE ++ EAE+L D+M    I P+ +TY
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N +I GFC     D A  +F+ +     SP VVT+N +I  + +A        L+RE+  
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 455

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  +  TY  LI  F   D++  A +++  M   G  PD  T  +L++G C    ++E
Sbjct: 456 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 515

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +LF  +  +K++ + V YN++I G CK      A  L   +   G+ P++ +Y+  I 
Sbjct: 516 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 575

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C      +A VL ++M   G +P  S YN L R 
Sbjct: 576 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 611



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 173/341 (50%), Gaps = 19/341 (5%)

Query: 241 LVATQHTYTVLIC----GLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +V ++  YT + C    G+F    + D     Y KM++  +  ++Y++N LI  +C+  K
Sbjct: 97  MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA----------ERLLDQMKMAG 345
           +S     F ++       +VVT+NTL+ GLC E R+ EA            L DQM   G
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIG 216

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P VIT+N LI+G C  G   +A  L N++   G    VVTY  ++    K G++K A 
Sbjct: 217 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 276

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+ +MEE  I P  V Y+ +ID   +      A  ++S M + G +P+V+TY  +I G 
Sbjct: 277 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 336

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G   +A +L   M E ++ P+ + +N +I    KEG  + A +L  EM  + + P+ 
Sbjct: 337 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 396

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+S I   C+  ++ +A+     M  L   P V  +N +
Sbjct: 397 VTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTI 433



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 173/354 (48%), Gaps = 11/354 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K      A + F +ML+ G+ P   T+N +   +   CSF    D   L 
Sbjct: 293 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM---IDGFCSFGRWSDAQRLL 349

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 ++  DV +F  LI    + G L +A ++ +++      P+ V Y S+I G CK+
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + AK +F  +    +V    T+  +I    +     +G +   ++   G+  +  TY
Sbjct: 410 NRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LIH +C    ++    LF EM    V  + +T N L+ G C+  +++EA  L + ++M
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  + + YN +I G C   + D+A+ LF  L  +G  P V TYNV+I  F        
Sbjct: 526 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 585

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A+ L  +M++ G  P   TY  LI   +++ +++K+ E+ S M+ +GFS D +T
Sbjct: 586 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 44/432 (10%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           +++ M K+   K  S  N  S+    H    + I   ++        H+ AQ L  +++ 
Sbjct: 262 IVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
             I  + FT                        Y  +ID      R SD A      M++
Sbjct: 320 KGIAPNVFT------------------------YNCMIDGFCSFGRWSD-AQRLLRDMIE 354

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
             + P   TFN+L+     S S  +G LF +E  C   L      D  ++  +I G C+ 
Sbjct: 355 REINPDVLTFNALI-----SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK- 408

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
              +  F+    + ++  SP+VV + ++ID  C+   ++    L R+I   GLVA   TY
Sbjct: 409 ---HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  +        + +++M  +GV P   T N L++ +C   K+ E  +LF+ ++ 
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++  + V YN +I G+CK  +V EA  L   + + G+ P+V TYN +I GFC       
Sbjct: 526 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 585

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF+++K NG  P   TYN LIR   KAG    + +L+ EM   G +    T  ++ D
Sbjct: 586 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645

Query: 429 SFVRSDDMEKAF 440
             +    ++K+F
Sbjct: 646 -LITDGRLDKSF 656



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 10/284 (3%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +    FD M         V  N +I    +  R   A  L  +M++  I  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR----------AFSKAGNSKMAS 405
           LI  FCD  +   +   F +L   G  P VVT+N L+           A +  G      
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  +M E G+TP  +T+  LI+       + +A  + + M   G   DV TYG +++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G+ K A  L + M ET ++P+ V+Y+ +I   CK+G+   A  L  EM EKG+ PN+
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+  I   C  G+W +A+ LL  M++  + P V  +N L  A
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 208/386 (53%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G L KA E +  +E +GF PNVV Y ++I G    G+IE A+ +   +   G+    +TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G+ K G  ++    ++KM   G+ P+  TYN LI  YCN+G +   F   DEM  
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           + +  +V TYN L+  L  E R+ EA+ ++ +M+  GI P+ ITYN LI+G+   G   +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF L N++ S G  P+ VTY  LI   S+    K A DL  ++ ++G++P  + +  +ID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
               + ++E+AF +   M +    PD  T+  L+ G C +G ++EA  L + M    ++P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + + YN +I GY + G+   A  +  EM   G  P + +Y++ I  LC++ +   AE LL
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 549 NQMLKLGLKPSVSLYNILYRAKNNIE 574
            +M+  G+ P  S Y  L     N++
Sbjct: 547 KEMVNKGISPDDSTYLSLIEGMGNVD 572



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 189/365 (51%), Gaps = 1/365 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G +P   ++N+++       + +         R K +E D Y++G LI G C+ G L +A
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             + +++ E+G  PN V Y +LIDG C  GD+ERA     ++ + G++ +  TY +L+  
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           LF  G   +  +  ++M+  G+ P   TYN LI+ Y   G     F L +EM  + +   
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            VTY +LI  L +  R++EA+ L +++   G+SP+VI +N +IDG C  G  ++AF L  
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++      P  VT+N L++   + G  + A  L+ EM+ RGI P  ++Y  LI  + R  
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D++ AF +   M   GF+P + TY  LI  LC       A +L   M    + P+D  Y 
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 562

Query: 495 MMIFG 499
            +I G
Sbjct: 563 SLIEG 567



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 178/359 (49%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V S+  +I G    G++  A  +L+ +   G  P+   Y SLI G CK G +E A  LF
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+ E+GLV    TY  LI G    G  +  F + ++M   G+ PS+ TYN L+H    E
Sbjct: 267 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 326

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E   +  EMR + +  + +TYN LI G  +    + A  L ++M   GI P  +TY
Sbjct: 327 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTY 386

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI          +A  LF ++   G SP V+ +N +I      GN + A  L++EM+ 
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + + P EVT+  L+    R   +E+A  +   M+  G  PD  +Y  LI G   +G++K+
Sbjct: 447 KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKD 506

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           A  + + M      P  + YN +I   CK      A  LL EM  KG+ P+ ++Y S I
Sbjct: 507 AFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 164/309 (53%), Gaps = 35/309 (11%)

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNT-------------------------------- 320
           EGK+ +  +    M       NVV+YNT                                
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 321 ---LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
              LI G+CKE R++EA  L D+M   G+ PN +TYN LIDG+C+ G+ ++AF   +++ 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  PSV TYN+L+ A    G    A D+++EM ++GI P  +TY ILI+ + R  + +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +AF++++ M   G  P   TY  LI+ L  +  MKEA  LF  + +  + P+ +++N MI
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+C  GN  RA  LL EM+ K + P+  ++++ +   C++GK  EA +LL++M   G+K
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 558 PSVSLYNIL 566
           P    YN L
Sbjct: 486 PDHISYNTL 494



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 179/332 (53%), Gaps = 1/332 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y S+I    K    ++A   F +M++ G+ P + T+N+L+         ++ + +  
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   K +   V ++ +L+      G + +A +++ ++ + G  P+ + Y  LI+G  + G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + +RA  L  ++   G+  T  TYT LI  L +    K+  + +EK+   GVSP +  +N
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I  +C  G V   F L  EM  + V  + VT+NTL+ G C+E +V+EA  LLD+MK  
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI P+ I+YN LI G+   G+   AF + +++ S G +P+++TYN LI+   K     +A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            +L++EM  +GI+P + TY  LI+     D +
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 12/288 (4%)

Query: 293 EGKVSEGFKLFDEM---RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           E +++   +LFDE+   R R    + + ++ L      E ++++A   +  M+  G  PN
Sbjct: 154 ETRIATNRELFDELTLSRDRLSVKSSIVFDLL------EGKLKKAREFIGFMEGLGFKPN 207

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V++YN +I G+   G  + A R+ + ++  G  P   TY  LI    K G  + AS L  
Sbjct: 208 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 267

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M E G+ P+ VTY  LID +    D+E+AF     M K G  P V TY +L+H L M+G
Sbjct: 268 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 327

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M EA  +   M +  + P+ + YN++I GY + GN+ RA  L  EM  KG+ P   +Y+
Sbjct: 328 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYT 387

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           S I VL +  +  EA+ L  ++L  G+ P V ++N +   + A  N+E
Sbjct: 388 SLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVE 435


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 277/586 (47%), Gaps = 58/586 (9%)

Query: 28   AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR- 86
                F+WA R       +S+ I++ L    ++S     AQ+LI          SSF  R 
Sbjct: 527  VLDFFDWA-RSRRDSNLESLCIVIHL---AVASKDLKVAQSLI----------SSFWERP 572

Query: 87   ------SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
                  S +     L  +  +  +  R+++      ++  +  +A   F +ML+ G+   
Sbjct: 573  KLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLS 632

Query: 141  SNTFNSLLIFVIKSCS-FDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
             ++ N  L  + K C+      + F E     V  +V S+ I+I   C+ G +N+A  +L
Sbjct: 633  VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL 692

Query: 199  NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY---------- 248
              +E  G++P+V+ Y+++I+G C+ G++++   L  K+ + GL    +TY          
Sbjct: 693  LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752

Query: 249  -------------------------TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
                                     T L+ G  K G  +   +F+ +M    ++P + TY
Sbjct: 753  CKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 812

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              +I  +C  G + E  KLF EM  R +  +++T+  L+ G CK   +++A R+ + M  
Sbjct: 813  TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            AG SPNV+TY  LIDG C  G+ D A  L +++   G  P++ TYN ++    K+GN + 
Sbjct: 873  AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932

Query: 404  ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            A  LV E E  G+    VTYT L+D++ +S +M+KA E+ + M   G  P + T+ VL++
Sbjct: 933  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992

Query: 464  GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            G C+ G +++  KL N M    + PN   +N ++  YC   N   A  +  +M  +G+ P
Sbjct: 993  GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052

Query: 524  NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  +Y + +   C      EA  L  +M   G   SVS Y++L + 
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 225/436 (51%), Gaps = 1/436 (0%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
            G  P   ++++++    +    DK W    + + K ++ + Y++G +I   C    L +A
Sbjct: 699  GYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEA 758

Query: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             E  +++   G  P+ ++YT+L+DG CK GDI  A   F ++    +     TYT +I G
Sbjct: 759  EEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 818

Query: 255  LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
              + G   +  + + +M   G+ P + T+  L++ YC  G + + F++ + M     + N
Sbjct: 819  FCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878

Query: 315  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            VVTY TLI GLCKE  +  A  LL +M   G+ PN+ TYN +++G C +G  ++A +L  
Sbjct: 879  VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938

Query: 375  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + ++ G +   VTY  L+ A+ K+G    A +++ EM  +G+ P+ VT+ +L++ F    
Sbjct: 939  EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998

Query: 435  DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             +E   ++ + M   G +P+  T+  L+   C++ N+K A+ ++  M    +EP+   Y 
Sbjct: 999  MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058

Query: 495  MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
             ++ G+C   N   A  L  EM  KG   ++++YS  I    +  K+ EA  + +QM + 
Sbjct: 1059 NLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 555  GLKPSVSLYNILYRAK 570
            GL     +++     K
Sbjct: 1119 GLAADKEIFDFFSDTK 1134


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 210/409 (51%), Gaps = 37/409 (9%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           +A  ++ Q+LD+GV P +  FN L+  +I+S                             
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRS----------------------------- 257

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                G L  A  + +++   G  P VV + +L+ G CK  D+  A  L   + + G+  
Sbjct: 258 -----GKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAP 312

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
             +TY   + GL K G  +D  E +E+M+  GV+P+   +  LI  +C EG V+ G +L 
Sbjct: 313 DVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELH 372

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R +  ++V YN L  GLC+   ++ A  ++++M+  G+ P+ +TY  LIDGFC  
Sbjct: 373 REMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKE 432

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           GE D A  +  ++   G +   VTY  LI   SK+G S  +  ++ EM E G+ P   TY
Sbjct: 433 GELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTY 492

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T++ID+F ++ D++  F++   MQ  G  P V TY V+++G C+ G MK A  L N+M  
Sbjct: 493 TMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLN 552

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
             + P+D+ YN+++ G+CK G    A  L    + KG+V +   Y+S I
Sbjct: 553 IGVCPDDITYNILLDGHCKHGKVRDAEEL---KSAKGMVSDFGLYTSLI 598



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 162/339 (47%), Gaps = 35/339 (10%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + + FY ++   GV P    +N L+ +    GK++    +FDEM  R V   VVT+NTL+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G+CK   +  A  L   M  AG++P+V TY   + G C AG    A  +F +++  G +
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346

Query: 383 PSVVTYNVLIRAFSKAGNS-----------------------------------KMASDL 407
           P+ V +  LI A  K GN                                    K A+D+
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V EM   G+ P +VTYT LID F +  +++ A EM   M   G + D  TY  LI GL  
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   ++ ++   M E  LEP++  Y M+I  +CK  +     +LL EM  KG  P + +
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  +   C  G+   A++LLN ML +G+ P    YNIL
Sbjct: 527 YNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNIL 565



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 143/274 (52%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E +  + ++    V      +N L+  + +  ++  A  + D+M   G+ P V+T+N 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+ G C A + + A  L   +   G +P V TY   ++   KAG  + A ++  EM ERG
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ V +T LID+  +  ++    E++  M   G   D+  Y  L +GLC   ++K A+
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M    L+P+ V Y  +I G+CKEG    A+ +  EM+++G+  +  +Y++ I  L
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + G+  ++E +L +M++ GL+P  + Y ++  A
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDA 498



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 68/142 (47%)

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   R   + +A+  Y  +  +G  P+   + +L+  +   G +  A  +F+ M    + 
Sbjct: 217 DLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVP 276

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P  V +N ++ G CK  +   A  L G M + G+ P++ +Y + +  LC+ G+  +A  +
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
             +M + G+ P+  ++  L  A
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDA 358


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 226/436 (51%), Gaps = 1/436 (0%)

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNK 193
           +G+ P + T N L+    +    D G+   ++  +  ++  + +F  LI G  + G   +
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A E+ + +   G  P+   YT++I+G CK G+   A  LF+K+ E G      TY+ LI 
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K     +  + +  M+   +SP+++TY  LI   CN  +  E   L +EM    +  
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVVT+N L+   CKE +V  AE +L  M   G+ P+V+TYN L+ G+    E  +A +LF
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + + + G  P V +Y++LI  + KA     A  L  EM  +G TP+ V+Y  LI    + 
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             + +A +++  M  +G  P++YTY +L+ G C +G + +A +LF +M  T L+PN V+Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N+++   CK GN   A  L  E+   GL PN+  Y++ I  LC++G   EA      M  
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423

Query: 554 LGLKPSVSLYNILYRA 569
            G  P    YN++ R 
Sbjct: 424 DGCPPDEFSYNVIIRG 439



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 212/422 (50%), Gaps = 1/422 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G++P   TF +L+  + K   F +    F +   +  + D Y++  +I G C+ G+   A
Sbjct: 40  GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +  ++EE G   NVV Y++LI   CK   +  A  +F  +    +  T  TYT LI G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L      K+      +M    + P++ T+N L+  +C EGKV     +   M    V  +
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVTYN+L+ G      V EA +L D M   G  P+V +Y+ LI+G+C A   D+A +LFN
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++   G +P+ V+YN LI    + G  + A DL + M   G  P+  TY IL+D F +  
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            + KAF ++  MQ +   P++  Y +L++ +C  GN+K+A +LF+ ++   L+PN  +Y 
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G CKEG    AL     M + G  P+  SY+  I    Q      A  L+ +M   
Sbjct: 400 TIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459

Query: 555 GL 556
           G 
Sbjct: 460 GF 461



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 187/369 (50%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           +E  G SPN      LI+  C+   ++    +  K  +LGL  T  T+T LI GL K G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                E ++ M   G  P  YTY  +I+  C  G+ +    LF +M       NVVTY+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI  LCK  RV EA  +   MK   ISP + TY  LI G C+     +A  L N++ S  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P+VVT+NVL+  F K G    A  +++ M E G+ P  VTY  L+  +    ++ +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           +++ +M   G  PDV++Y +LI+G C    + EA +LFN M      PN+V YN +I G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G    A  L   M+  G +PN+ +Y+  +   C+ G   +A  L   M    LKP++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 561 SLYNILYRA 569
            +YNIL  A
Sbjct: 361 VMYNILVNA 369



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 211/406 (51%), Gaps = 3/406 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
           QA+  F  M+  G +P   T+ +++  +  I   +   G LF        +L+V ++  L
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAG-LFKKMEEAGCQLNVVTYSTL 121

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+   +N+A ++ + ++    SP +  YTSLI G C     + A  L  ++  L +
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+ VL+    K G         + M   GV P + TYN L++ Y    +V E  K
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LFD M  +    +V +Y+ LI G CK  R+ EA++L ++M   G +PN ++YN LI G C
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  LF  + +NG  P++ TY +L+  F K G    A  L R M+   + P+ V
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y IL+++  +S +++ A E++S +   G  P+V  Y  +I+GLC +G + EA + F +M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            +    P++  YN++I G+ +  +  RA+ L+GEM ++G + +  +
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 45/355 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++I +  K R  ++AL  F  M    + P   T+ SL+  +   C+F + W     L 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL---CNFSR-WKEASALL 173

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS-------- 215
                  +  +V +F +L+   C+ G +  A  VL  + EMG  P+VV Y S        
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233

Query: 216 ---------------------------LIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
                                      LI+G CK   I+ AK LF ++   G      +Y
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI GL + G  ++  + ++ M  NG  P+LYTY  L+  +C +G + + F+LF  M+ 
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N+V YN L+  +CK   +++A  L  ++ + G+ PNV  Y  +I+G C  G  D+
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVT 422
           A   F  ++ +G  P   +YNV+IR F +  +   A  L+ EM +RG IT +  T
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTT 468


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 213/388 (54%), Gaps = 3/388 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D+ +F  LI G C    + +A  ++NQ+ EMG  P+VV+YT++ID  CKNG +  A  
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF ++   G+      YT L+ GL  +G  +D       M    + P + T+N LI  + 
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK  +  +L++EM    +A N+ TY +LI G C E  V EA ++   M+  G  P+V+
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  LI+GFC   + D A ++F ++   G + + +TY  LI+ F + G   +A ++   M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK---SGFSPDVYTYGVLIHGLCMK 468
             RG+ P+  TY +L+     +  ++KA  ++  MQK    G +P+++TY VL+HGLC  
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++A  +F  M + +++   + Y ++I G CK G    A+ L   +  KG+ PN+ +Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I  L ++G   EA VL  +M + G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 234/467 (50%), Gaps = 14/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+   L S   ++AL  F  M++S   P    F  LL  + K   FD        N 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD-----VVINL 94

Query: 169 CK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           C       V  D+Y+  +L+   C++     A   L ++ ++GF P++V +TSLI+G C 
Sbjct: 95  CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
              +E A  +  ++ E+G+      YT +I  L KNG        +++M+  G+ P +  
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  L++  CN G+  +   L   M  R++  +V+T+N LI    KE +  +AE L ++M 
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
              I+PN+ TY  LI+GFC  G  D+A ++F  +++ G  P VV Y  LI  F K     
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  +  EM ++G+T + +TYT LI  F +      A E++S M   G  P++ TY VL+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394

Query: 463 HGLCMKGNMKEASKLFNSMWETKLE---PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           H LC  G +K+A  +F  M + +++   PN   YN+++ G C  G   +AL +  +M ++
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   I +Y+  I  +C+ GK   A  L   +   G+KP+V  Y  +
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 4/349 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           +Y +IID+  K+   + AL  F QM + G+RP    + SL+  +  S  + D   L    
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + K++ DV +F  LI    + G    A E+ N++  M  +PN+  YTSLI+G C  G +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +F  +   G       YT LI G  K     D  + + +M   G++ +  TY  L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK---M 343
           I  +   GK +   ++F  M  R V  N+ TYN L+  LC   +V++A  + + M+   M
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G++PN+ TYN L+ G C  G+ +KA  +F  ++       ++TY ++I+   KAG  K 
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           A +L   +  +G+ P+ VTYT +I    R     +A  ++  M++ G S
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 16/241 (6%)

Query: 345 GISPNVITYNKLID------GFCDAGET----------DKAFRLFNQLKSNGQSPSVVTY 388
           G S   +++++L+D       FC+  E           ++A  LF  +  +   PS++ +
Sbjct: 16  GNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDF 75

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             L+   +K     +  +L   ++  G++    T  +L++ F +S     A      M K
Sbjct: 76  TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GF PD+ T+  LI+G C+   M+EA  + N M E  ++P+ V+Y  +I   CK G+   
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           AL L  +M   G+ P++  Y+S +  LC  G+W +A+ LL  M K  +KP V  +N L  
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255

Query: 569 A 569
           A
Sbjct: 256 A 256


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 248/498 (49%), Gaps = 30/498 (6%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK- 159
           N V  +  Y ++ID + K    ++AL +  +M +  V     T+NSLL  +  S   D  
Sbjct: 222 NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281

Query: 160 ---------------GWLFFSENRC-------------KVELDVYSFGILIKGCCEAGDL 191
                          G+L F  +               ++ +D  ++ IL+ G C  G +
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            KA EVL +L E G +P+ + Y  L++  C+ GD+++A +   ++ E GL   + T+  +
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTV 401

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I    + G       +  +M   GVSP++ TYN LI+ Y  +G     F+  DEM    +
Sbjct: 402 ISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NV++Y +LI  LCK+ ++ +AE +L  M   G+SPN   YN LI+  C   +   AFR
Sbjct: 462 KPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFR 521

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            F+++  +G   ++VTYN LI    + G  K A DL  +M  +G  P  +TY  LI  + 
Sbjct: 522 FFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYA 581

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +S + +K  E+Y  M+  G  P V T+  LI+  C K  +    K+F  M +  L P+  
Sbjct: 582 KSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQF 640

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN MI+ Y ++GN  +A+ L  +M ++G+  +  +Y+S I    +D +  E + L++ M
Sbjct: 641 VYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM 700

Query: 552 LKLGLKPSVSLYNILYRA 569
              GL P V  YNIL + 
Sbjct: 701 KAKGLVPKVDTYNILIKG 718



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 238/499 (47%), Gaps = 35/499 (7%)

Query: 102 PVTKS--RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           P T+S  RL  +++D    SR  ++ L  F  ++DSG RP +  +   +   +     DK
Sbjct: 120 PSTRSVNRLLRTLVD----SRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDK 175

Query: 160 GW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           G+ L  S  +  +   V+++ +++ G C+   +  A ++ +++ +    PN V Y +LID
Sbjct: 176 GFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLID 235

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK G IE A     ++ E  +     TY  L+ GL  +G   D  E   +M+ +G  P
Sbjct: 236 GYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP 295

Query: 279 SLY----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
             +                            TY  L++  C  G++ +  ++  ++    
Sbjct: 296 GGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENG 355

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           V  + ++YN L+   C+E  V++A    +QM+  G+ PN IT+N +I  FC+ GE D A 
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
               ++   G SP+V TYN LI  + + G+     + + EM++ GI P+ ++Y  LI+  
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +  A  + + M   G SP+   Y +LI   C    +K+A + F+ M ++ ++   
Sbjct: 476 CKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I G  + G   +A  L  +M  KG  P++ +Y+S I    +     +   L ++
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M  LG+KP+V  ++ L  A
Sbjct: 596 MKILGIKPTVGTFHPLIYA 614



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 240/568 (42%), Gaps = 103/568 (18%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSN---PVTKSRLYESIIDAHLKSRLS 122
            Q L   I  GR  ++    RSLL   T  F S S     V+K    ++++     S++ 
Sbjct: 45  VQKLETLISRGRTITARRFLRSLLLTKTA-FSSLSELHAHVSKPFFSDNLLWLCSVSKML 103

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D+A   +  M   G  P + + N LL  ++ S  F+K    F++        D  ++G  
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           ++      DL+K FE++  + + G  P+V  Y  ++ G CK           R+I     
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCK----------VRRI----- 208

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                               KD  + +++M    + P+  TYN LI  YC  G + E   
Sbjct: 209 --------------------KDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALG 248

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI---------- 351
             + M+ + V CN+VTYN+L+ GLC   RV +A  +L +M+ +G  P             
Sbjct: 249 FKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSN 308

Query: 352 ------------------TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
                             TY  L++G C  G  +KA  +  +L  NG +PS ++YN+L+ 
Sbjct: 309 GAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVN 368

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA-------------- 439
           A+ + G+ K A     +MEERG+ P+ +T+  +I  F  + +++ A              
Sbjct: 369 AYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSP 428

Query: 440 ---------------------FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
                                FE    M K+G  P+V +YG LI+ LC    + +A  + 
Sbjct: 429 TVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVL 488

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M    + PN  +YNM+I   C       A R   EM + G+   + +Y++ I  L ++
Sbjct: 489 ADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRN 548

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+  +AE L  QM   G  P V  YN L
Sbjct: 549 GRVKKAEDLFLQMAGKGCNPDVITYNSL 576



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 195/415 (46%), Gaps = 36/415 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+ IL+   C+ GD+ KA     Q+EE G  PN + + ++I   C+ G+++ A+   R++
Sbjct: 362 SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM 421

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL----------------------- 273
            E G+  T  TY  LI G  + G     FEF ++M                         
Sbjct: 422 VEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKL 481

Query: 274 ------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
                        GVSP+   YN LI   C+  K+ + F+ FDEM    +   +VTYNTL
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTL 541

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL +  RV++AE L  QM   G +P+VITYN LI G+  +  T K   L++++K  G 
Sbjct: 542 INGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGI 601

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+V T++ LI A  K G   M   + +EM +  + P +  Y  +I S+    ++ KA  
Sbjct: 602 KPTVGTFHPLIYACRKEGVVTM-DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMS 660

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  M   G   D  TY  LI        + E   L + M    L P    YN++I G C
Sbjct: 661 LHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLC 720

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
              +   A     EM E+GL+ N++     I  L ++G   EA+++ +++   GL
Sbjct: 721 DLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 188/413 (45%), Gaps = 42/413 (10%)

Query: 101 NPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           N VT S++ Y  +++A+ +     +A+    QM + G+ P   TFN+++    ++   D 
Sbjct: 354 NGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDH 413

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
              +      K V   V ++  LI G  + G   + FE L+++++ G  PNV+ Y SLI+
Sbjct: 414 AETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLIN 473

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNG 275
             CK+  +  A+++   +   G+      Y +LI   C L K    KD F F+++M  +G
Sbjct: 474 CLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSK---LKDAFRFFDEMIQSG 530

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           +  +L TYN LI+     G+V +   LF +M  +    +V+TYN+LI G  K +  Q+  
Sbjct: 531 IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCL 590

Query: 336 RLLDQMKMAGISPNVIT----------------------------------YNKLIDGFC 361
            L D+MK+ GI P V T                                  YN++I  + 
Sbjct: 591 ELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           + G   KA  L  Q+   G     VTYN LI A+ +         LV +M+ +G+ P   
Sbjct: 651 EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVD 710

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           TY ILI       D   A+  Y  M + G   +V     LI GL  +G ++EA
Sbjct: 711 TYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 8/312 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK---GWLFFS 165
           Y S+I+   K R    A      M+  GV P +  +N L   +  SCS  K    + FF 
Sbjct: 468 YGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML---IEASCSLSKLKDAFRFFD 524

Query: 166 EN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E  +  ++  + ++  LI G    G + KA ++  Q+   G +P+V+ Y SLI G  K+ 
Sbjct: 525 EMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSV 584

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + ++   L+ K+  LG+  T  T+  LI    K G+      F E +Q++ V P  + YN
Sbjct: 585 NTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLV-PDQFVYN 643

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I+ Y  +G V +   L  +M  + V C+ VTYN+LI    ++ RV E + L+D MK  
Sbjct: 644 EMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P V TYN LI G CD  + + A+  + ++   G   +V     LI    + G  + A
Sbjct: 704 GLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763

Query: 405 SDLVREMEERGI 416
             +  E+   G+
Sbjct: 764 QIVSSELSIGGL 775



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 6/242 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   ++    +A   F QM   G  P   T+NSL+    KS +  K    + + +
Sbjct: 538 YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597

Query: 169 C-KVELDVYSFGILIKGCCEAG--DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              ++  V +F  LI  C + G   ++K F+   ++ +M   P+  +Y  +I    ++G+
Sbjct: 598 ILGIKPTVGTFHPLIYACRKEGVVTMDKMFQ---EMLQMDLVPDQFVYNEMIYSYAEDGN 654

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           + +A  L +++ + G+   + TY  LI    ++    +     + M+  G+ P + TYN 
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C+    +  +  + EM  R +  NV     LI GL +E  ++EA+ +  ++ + G
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774

Query: 346 IS 347
           ++
Sbjct: 775 LN 776


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 238/466 (51%), Gaps = 19/466 (4%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
           +  AL +FH M+ S   P  ++FN LL  + K   + + +  +++ R   +  D  +  I
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+   C    L + F     +   G+SPN+V Y +LI G C    I  A  LF ++ +LG
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-------PSLYTYNCLIHEYCNE 293
                 TY  LI GL   G      + +++M LN +S       P++ TYN ++   C  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEM-LNDISRYEINCKPNVITYNIIVDGLCKV 228

Query: 294 GKVSEGFKLFDEMRHREVACN----------VVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           G+  E  +LF+EM+ + +  N          +VT+N LI  LCKE +V EA++LL  M  
Sbjct: 229 GREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 288

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           +GI P+++TYN LI+GFC  G+ + A  LF  + S G  P V++YNVLI  +SK    + 
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 348

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  EM   G  P+ +TY  L+     +  ++ A +++S+M+  G + + YTYG+ + 
Sbjct: 349 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 408

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC    + EA KLF  +  +  +      N +I G CK G    A  L  +++ +G  P
Sbjct: 409 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 468

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N+ +Y+  I   C++G+  +A VL+ +M   G  P +  YN L R 
Sbjct: 469 NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 176/354 (49%), Gaps = 24/354 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+D   K    D+A   F +M   G+ P     N +L         D+G        
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIP-----NEML---------DQG-------- 255

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             ++ D+ +F +LI   C+ G + +A ++L  + E G  P++V Y SLI+G C  GD+  
Sbjct: 256 --LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ LF  +   G      +Y VLI G  K    ++  + Y +M L G  P++ TY+ L+ 
Sbjct: 314 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 373

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                GKV +  KLF  M+   +A N  TY   + GLCK   + EA +L  ++K +    
Sbjct: 374 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 433

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +   N LIDG C AG+ + A+ LF +L + G  P+VVTY ++I  F + G    A+ L+
Sbjct: 434 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           ++ME  G TP  +TY  L+  F  S+ +E+  ++   M +   SPD  T  +++
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 259/530 (48%), Gaps = 10/530 (1%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSR 107
           ++++L+++M    H     ++   +        F      +L  L  LF   ++ V  + 
Sbjct: 92  LMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 151

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +++   K +L +     + +M   G++P   TFN+L+  + ++       L   E 
Sbjct: 152 LLNVLVEGS-KMKLLESV---YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + V  D  +F  L++G  E G +  A  V  ++ EMG S   V    LI+G CK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A    ++    G    Q TY   + GL +N       +  + M   G  P ++TYN +
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C  G++ E   + ++M  R    ++ T+NTLI  LC   R++EA  L  Q+ + G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP+V T+N LI+  C  G+   A RLF ++K++G +P  VTYN LI      G    A D
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+++ME  G   S +TY  +ID   +   +E+A E++  M   G S +  T+  LI GLC
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + +A  L N M    L+PN++ YN ++  YCK+G+  +A  +L  M   G   ++ 
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA---KNNI 573
           +Y + I  LC+ G+   A  +L  M   G++P+   YN + ++   +NNI
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 235/481 (48%), Gaps = 12/481 (2%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           L+L +MSS   A  +T    ++ G +   S      +         S+  VT + L    
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL---- 257

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV- 171
           I+ + K    + AL Y  Q +  G  P   T+N+   FV   C  D            V 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNT---FVNGLCQNDHVGHALKVMDVMVQ 314

Query: 172 ---ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + DV+++ I++   C+ G L +A  +LNQ+ + G  P++  + +LI   C    +E 
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L R++   G+    +T+ +LI  L K G        +E+M+ +G +P   TYN LI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ GK+ +   L  +M       + +TYNT+I GLCK+MR++EAE + DQM + GIS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N IT+N LIDG C   + D AF L NQ+ S G  P+ +TYN ++  + K G+ K A+D++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M   G     VTY  LI+   ++   + A ++   M+  G  P    Y  ++  L  +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIAS 527
            N+++A  LF  M E    P+ + Y ++  G C+ G   + A   + EM +KG +P  +S
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 528 Y 528
           +
Sbjct: 675 F 675



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 201/415 (48%), Gaps = 10/415 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   K+   ++A    +QM+D G  P   TFN+L+  +      ++      +  
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  DVY+F ILI   C+ GD + A  +  +++  G +P+ V Y +LID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + +   G   +  TY  +I GL K    ++  E +++M L G+S +  T+N LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + K+ + F L ++M    +  N +TYN+++   CK+  +++A  +L+ M   G  
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A ++   ++  G  P+   YN ++++  +  N + A  L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDD-MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P  +TY I+     R    +++AF+    M   GF P+  ++ +L  GL 
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 467 ---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              M      A ++   M +  L  +DV     I GY K    Y AL   G   E
Sbjct: 684 NLGMDDYFIRAIEII--MEKVDLRESDV---SAIRGYLKIRKFYDALATFGRFLE 733


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 271/551 (49%), Gaps = 50/551 (9%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           ++L P      ++W  +         IS+ L L    + S ++A   + I   + G + +
Sbjct: 77  SELDPDLCLRYYSWLVKN------SDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRN 130

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
            S      + H   +     N    S + + ++ A+  +   +     F +    G +  
Sbjct: 131 GSDHQVHSIFHAISM---CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187

Query: 141 SNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           + +   L+I ++K + S D  +++    R K++ +V++F ++I   C+ G +NKA +V+ 
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247

Query: 200 QLEEMGFSPNVVIYTSLIDGCCK---NGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
            ++  G SPNVV Y +LIDG CK   NG + +A  + +++ E                  
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE------------------ 289

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                            N VSP+L T+N LI  +  +  +    K+F EM  ++V  NV+
Sbjct: 290 -----------------NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           +YN+LI GLC   ++ EA  + D+M  AG+ PN+ITYN LI+GFC      +A  +F  +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K  G  P+   YN+LI A+ K G       L  EME  GI P   TY  LI    R+ ++
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           E A +++  +   G  PD+ T+ +L+ G C KG  ++A+ L   M +  L+P  + YN++
Sbjct: 453 EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511

Query: 497 IFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           + GYCKEGN   A  +  +M  E+ L  N+ASY+  +    Q GK  +A +LLN+ML+ G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 556 LKPSVSLYNIL 566
           L P+   Y I+
Sbjct: 572 LVPNRITYEIV 582



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +I+A  K+   ++A      M   G  P   ++N+L+    K     K +   +  +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 169 CKVELDV----YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             VE DV     +F ILI G  +  +L  + +V  ++ +    PNV+ Y SLI+G C  G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A  +  K+   G+     TY  LI G  KN + K+  + +  ++  G  P+   YN
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  YC  GK+ +GF L +EM    +  +V TYN LI GLC+   ++ A++L DQ+   
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+++T++ L++G+C  GE+ KA  L  ++   G  P  +TYN++++ + K GN K A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524

Query: 405 SDLVREME-ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           +++  +ME ER +  +  +Y +L+  + +   +E A  + + M + G  P+  TY ++  
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584

Query: 464 GLCMKG 469
            +  +G
Sbjct: 585 EMVDQG 590



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 4/364 (1%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N +I   L+     N   E     F++ G  G   +  +   L+  L K     D    Y
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK- 327
           ++M    + P+++T+N +I+  C  GK+++   + ++M+    + NVV+YNTLI G CK 
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271

Query: 328 --EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
               ++ +A+ +L +M    +SPN+ T+N LIDGF        + ++F ++      P+V
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           ++YN LI      G    A  +  +M   G+ P+ +TY  LI+ F ++D +++A +M+  
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           ++  G  P    Y +LI   C  G + +   L   M    + P+   YN +I G C+ GN
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A +L  ++  KGL P++ ++   +   C+ G+  +A +LL +M K+GLKP    YNI
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 566 LYRA 569
           + + 
Sbjct: 511 VMKG 514



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 81  SSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           + F    +L     +F S      V  +R+Y  +IDA+ K    D       +M   G+ 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P   T+N L+  + ++ + +     F +   K   D+ +F IL++G C  G+  KA  +L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GELGLVATQHTYTVLICGLFK 257
            ++ +MG  P  + Y  ++ G CK G+++ A  +  ++  E  L     +Y VL+ G  +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G  +D      +M   G+ P+  TY  +  E  ++G V +
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 247/489 (50%), Gaps = 7/489 (1%)

Query: 81  SSFTPRSLL-CHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLDSGVR 138
           +SF P  LL C L  L    S+P    R ++S+I ++      +  A         +G  
Sbjct: 57  ASFPPLPLLVCFLRALRLLPSSP---PRPFDSLIKSYASLPNRASLAAAALAFARSAGYV 113

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           P    +N++L+  +   S      FF       V  +VY++ ILI+  C  G   +A  +
Sbjct: 114 PSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  +   G  PNVV Y +L+    + G+++ A+ L   + + GL     T+  ++ G+ K
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G  +D  + +++M   G++P   +YN L+  YC  G   E   +F EM  + +  +VVT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           + +LI  +CK   ++ A  L+ QM+  G+  N +T+  LIDGFC  G  D A      ++
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
                PSVV YN LI  +   G    A +L+ EME +G+ P  VTY+ +I ++ ++ D  
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            AFE+   M + G  PD  TY  LI  LC +  + +A  LF +M +  L+P++  Y  +I
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+CKEGN  RAL L  +M + G++P++ +YS  I  L +  +  EA+ LL ++      
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI 532

Query: 558 PSVSLYNIL 566
           P+ + Y+ L
Sbjct: 533 PANTKYDAL 541



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 235/522 (45%), Gaps = 90/522 (17%)

Query: 121 LSDQALF----YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDV 175
           LSD +L     +F  ML  GV P   T+N L+  +       +      + R      +V
Sbjct: 126 LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNV 185

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  L+     AG+++ A  ++  + + G  PN+V + S+++G CK G +E A+ +F +
Sbjct: 186 VTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 245

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   GL     +Y  L+ G  K G   +    + +M   G+ P + T+  LIH  C  G 
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +     L  +MR R +  N VT+  LI G CK+  + +A   +  M+   I P+V+ YN 
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C  G  D+A  L +++++ G  P VVTY+ +I A+ K  ++  A +L ++M E+G
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425

Query: 416 I-----------------------------------TPSEVTYTILIDSFVRSDDMEKAF 440
           +                                    P E TYT LID   +  ++E+A 
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGL----------------------------------- 465
            ++  M K+G  PDV TY VLI+GL                                   
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCC 545

Query: 466 ---------------CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                          CMKG M EA K++ SM +     +  VY+++I G+C+ GN  +AL
Sbjct: 546 RKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKAL 605

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
               +M ++G  PN  S  S I  L ++G   EA+ ++ Q+L
Sbjct: 606 SFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLL 647



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 155/295 (52%), Gaps = 1/295 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  PS+  YN ++    ++  ++   + FD M    VA NV TYN LI  LC     +EA
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             +L  M+ AG  PNV+TYN L+  F  AGE D A RL   +   G  P++VT+N ++  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KAG  + A  +  EM   G+ P  V+Y  L+  + ++    +A  +++ M + G  PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+  LIH +C  GN++ A  L   M E  L+ N+V +  +I G+CK+G    AL  + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M +  + P++  Y++ I   C  G+  EA  LL++M   GLKP V  Y+ +  A
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 145/327 (44%), Gaps = 16/327 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ +      D+A    H+M   G++P   T+++++    K+C     +    +  
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  D  ++  LI+  CE   L+ A  +   + ++G  P+   YTSLIDG CK G++E
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L  K+ + G++    TY+VLI GL K+    +  +   K+      P+   Y+ L+
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 288 H---------------EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           H                +C +G ++E  K++  M  R    +   Y+ LI G C+   V 
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A     QM   G +PN  +   LI G  + G   +A ++  QL +            LI
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662

Query: 393 RAFSKAGNSKMASDLVREMEERGITPS 419
                 GN     D++  M + G+ PS
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/409 (34%), Positives = 211/409 (51%), Gaps = 3/409 (0%)

Query: 123 DQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGI 180
           ++AL +  +M L  G  P   TFN L+  + K+              R   + D+Y++  
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C+ G++++A +VLNQ+ E   SPN V Y ++I   CK   +E A  L   +   G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++    TY  LI GL  +       E Y++M+  G  P  +TYN LI   C  GK+ E  
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM     A NV+TYNTLI G CK  R+ EAE + DQM++ G+S N +TYN LIDG 
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +   ++A +L +Q+   G  P   TYN L+  F KAG+ K A+D+V+ M   G  P  
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDI 581

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LI    ++  +E A ++   +Q  G +   + Y  +I  L  +   KEA +LF  
Sbjct: 582 VTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSY-RALRLLGEMNEKGLVPNIASY 528
           M E    P+ V Y ++  G C+ G     A+  + EM E+G VP  +S+
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSF 690



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/443 (33%), Positives = 228/443 (51%), Gaps = 8/443 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGD 190
           M+  G+RP  +TFN L+  + ++       L   E     +  D  +F  +++G  E G+
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL----GLVATQH 246
           L+ A  V  Q+ E G     V    L++G CK G IE A    R I E+    G    ++
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEA---LRFIEEMSLREGFFPDKY 302

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T+ +L+ GL K G  K   E  + M   G  P +YTYN LI   C  G+V E  K+ ++M
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R+ + N VTYNT+I  LCKE +V+EA +L   +   GI P+V TYN LI G C +   
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A  L+ ++K+ G  P   TYN+LI +    G  + A +L++EME  G   + +TY  L
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTL 482

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID F ++  + +A E++  M+  G S +  TY  LI GLC    ++EAS+L + M    L
Sbjct: 483 IDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+   YN ++  +CK G+  +A  ++  M   G  P+I +Y + I  LC+ G+   A  
Sbjct: 543 RPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATK 602

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           LL  +   G+  +   YN + +A
Sbjct: 603 LLRTIQMKGINLTPHAYNPVIQA 625



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 202/394 (51%), Gaps = 1/394 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D Y+F +L+ G  + G +  A EV++ +   GF P++  Y SLI G CK G+++ A  + 
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ E        TY  +I  L K    ++  +    +   G+ P + TYN LI   C  
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
              +   +L+ EM+ +    +  TYN LI  LC   ++QEA  LL +M+++G + NVITY
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITY 479

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LIDGFC      +A  +F+Q++  G S + VTYN LI    K+   + AS L+ +M  
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P + TY  L+  F ++ D++KA ++   M   G  PD+ TYG LI GLC  G ++ 
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEA 599

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A+KL  ++    +      YN +I    +   S  A+RL  EM EK   P+  +Y     
Sbjct: 600 ATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFR 659

Query: 534 VLCQ-DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LCQ  G   EA   + +ML+ G  P  S + +L
Sbjct: 660 GLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 209/479 (43%), Gaps = 39/479 (8%)

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE-LDVYSFGILIKG 184
           LFY+        +P S+ F  +L  + K+  FD       E +  +  +D  S  + I+ 
Sbjct: 75  LFYWASK-QPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIES 133

Query: 185 CCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
               G  N+  + ++ +E E G   N   Y  L++       ++  ++    +   G+  
Sbjct: 134 YASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRP 193

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+ +LI  L +    +      E+M+  G+ P   T+  ++  +  EG +    ++ 
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVK 253

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM-------------------- 343
           ++M         VT N L+ G CKE R++EA R +++M +                    
Sbjct: 254 EQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSK 313

Query: 344 ----------------AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                            G  P++ TYN LI G C  GE D+A ++ NQ+     SP+ VT
Sbjct: 314 TGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVT 373

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN +I    K    + A+ L   +  +GI P   TY  LI     S +   A E+Y  M+
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  PD +TY +LI  LC +G ++EA  L   M  +    N + YN +I G+CK     
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  +  +M  +G+  N  +Y++ I  LC+  +  EA  L++QM+  GL+P    YN L
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 4/151 (2%)

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           T T L+ S  R +D      ++    K   F P    +  ++H L   G       +   
Sbjct: 55  TPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKE 114

Query: 481 M-WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPNIASYSSTIGVLCQD 538
           M     +  ND +  + I  Y   G     L+ +  M  E G+V N   Y+  + VL   
Sbjct: 115 MKISLSVIDNDSLL-VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDG 173

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K    E+  + M+  G++P VS +NIL +A
Sbjct: 174 NKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 246/489 (50%), Gaps = 7/489 (1%)

Query: 81  SSFTPRSLL-CHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLDSGVR 138
           +SF P  LL C L  L    S+P    R ++S+I ++      +  A         +G  
Sbjct: 97  ASFPPLPLLVCFLRALRLLPSSP---PRPFDSLIKSYASLPNRASLAAAALAFARSAGYV 153

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           P    +N++L+  +   S      FF       V  +VY++ IL++  C  G   +A  +
Sbjct: 154 PSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  +   G  PNVV Y +L+    + G+++ A+ L   + E GL     T+  ++ G+ K
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G  +D  + +++M   G++P   +YN L+  YC  G   E   +F EM  + +  +VVT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           + +LI  +CK   ++ A  L+ QM+  G+  N +T+  LIDGFC  G  D A      +K
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
                PSVV YN LI  +   G    A +L+ EME +G+ P  VTY+ +I ++ ++ D  
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            AFE+   M + G  PD  TY  LI  LC +  + +A  LF +M +  L+P++  Y  +I
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+CKEGN   AL L  +M + G++P++ +YS  I  L +  +  EA+ LL ++      
Sbjct: 513 DGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPI 572

Query: 558 PSVSLYNIL 566
           P+ + Y+ L
Sbjct: 573 PANTKYDAL 581



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 233/522 (44%), Gaps = 90/522 (17%)

Query: 121 LSDQALF----YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDV 175
           LSD +L     +F  ML  GV P   T+N L+  +       +      + R      +V
Sbjct: 166 LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNV 225

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  L+     AG+++ A  ++  + E G  PN+V + S+++G CK G +E A+ +F +
Sbjct: 226 VTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 285

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   GL     +Y  L+ G  K G   +    + +M   G+ P + T+  LIH  C  G 
Sbjct: 286 MVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 345

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +     L  +MR R +  N VT+  LI G CK+  + +A   +  MK   I P+V+ YN 
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C  G  D+A  L +++++ G  P VVTY+ +I A+ K  ++  A +L ++M E+G
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465

Query: 416 I-----------------------------------TPSEVTYTILIDSFVRSDDMEKAF 440
           +                                    P E TYT LID   +  ++E A 
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGL----------------------------------- 465
            ++  M K+G  PDV TY VLI+GL                                   
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCC 585

Query: 466 ---------------CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                          CMKG M EA K++ SM +     +  VY+++I G+C+ GN  +AL
Sbjct: 586 RKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKAL 645

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
               +M + G  PN  S  S I  L ++G   EA+ ++ Q+L
Sbjct: 646 SFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLL 687



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 219/502 (43%), Gaps = 51/502 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +++ A  ++   D A      M + G++P   TFNS++  + K+   +     F E  
Sbjct: 228 YNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  D  S+  L+ G C+AG  ++A  V  ++ + G  P+VV +TSLI   CK G++E
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L R++ E GL   + T+T LI G  K G   D       M+   + PS+  YN LI
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK-------------------- 327
           + YC  G++ E  +L  EM  + +  +VVTY+T+I   CK                    
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 467

Query: 328 ---------------EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                          E R+ +A  L   M   G+ P+  TY  LIDG C  G  + A  L
Sbjct: 468 PDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSL 527

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL------ 426
            +++   G  P VVTY+VLI   SK+  +  A  L+ ++      P+   Y  L      
Sbjct: 528 HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRK 587

Query: 427 ---------IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                    +  F     M +A ++Y  M    ++ D   Y VLIHG C  GN+ +A   
Sbjct: 588 AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSF 647

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
              M +    PN      +I G  + G    A +++ ++     + +  +  + I +   
Sbjct: 648 HKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLN 707

Query: 538 DGKWPEAEVLLNQMLKLGLKPS 559
           +G       +L+ M K GL PS
Sbjct: 708 EGNVDAVLDVLHGMAKDGLLPS 729



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 156/295 (52%), Gaps = 1/295 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  PS+  YN ++    ++  ++   + FD M    VA NV TYN L+  LC     +EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             +L  M+ AG  PNV+TYN L+  F  AGE D A RL   ++  G  P++VT+N ++  
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KAG  + A  +  EM   G+ P  V+Y  L+  + ++    +A  +++ M + G  PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+  LIH +C  GN++ A  L   M E  L+ N+V +  +I G+CK+G    AL  + 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M +  + P++  Y++ I   C  G+  EA  LL++M   GLKP V  Y+ +  A
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 231/438 (52%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D+A      ++  G+ P   ++N+L+    K     +   +  +     VE + +++  +
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+AG +  A ++L      GF P+   Y+SLI+G C +GD+ RA  +F +  E G 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +   Y  L+ GL K GL     +  + M  +G SP ++TYN +++  C  G +S+   
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + ++   +    ++ T+NTLI G CK+  + +A  +LD M   GI+P+VITYN L++G C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A + D     F  +   G +P+++TYN+LI +F K      A +L +EM+ RG+TP  V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           T   LI     + +++KA+E++  ++K   FS     + ++I+  C K N+  A KLF+ 
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M  +   P++  Y +MI  YCK GN   A   L E   KGLVP+  +    +  LC   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA V++N M++ G+ P
Sbjct: 688 LSEAVVIINLMVQNGIVP 705



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 234/490 (47%), Gaps = 37/490 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K     +A   F +ML  G+ P   TFN L+  + K  +  +    FS+  
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  ++++F I I+G C  G +++A  +L  +   G +P+V+ Y +LI G CK+  + 
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+    K+   G+   + TY  +I G  K G+ ++  +        G  P  +TY+ LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  CN+G ++    +F E   +    +++ YNTL+ GL K+  V +A +L+  M   G S
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 348 PNVITYN-----------------------------------KLIDGFCDAGETDKAFRL 372
           P++ TYN                                    LIDG+C     DKA  +
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S+G +P V+TYN L+    KA       D  + M E+G TP+ +TY ILI+SF +
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDV 491
              + +A E++  M+  G +PD+ T   LI GLC  G + +A +LF ++  E K   +  
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           ++N+MI  +C++ N   A +L  +M      P+  +Y   I   C+ G    A   L + 
Sbjct: 604 IFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 552 LKLGLKPSVS 561
           +  GL PS +
Sbjct: 664 ISKGLVPSFT 673



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 249/544 (45%), Gaps = 28/544 (5%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           PL A  +FN   +  G +HT ++     + ++ K+  H    A   +L  +   + S   
Sbjct: 20  PLNALKMFNQVKTEDGFKHTLET----YKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                                   +Y  I+  + +     +A+  F +M      P   +
Sbjct: 76  ----------------------EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQS 113

Query: 144 FNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +N+++  +++   F +   ++       +  DVY+  I +K  C  G    A  +LN + 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G   N V Y ++I G  K      A  LF ++ + G+     T+  LI  L K G  +
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +  + + K+   GV P+L+T+N  I   C +G + E  +L + +    +  +V++YNTLI
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
           CG CK  ++ EAE  L +M  +G+ PN  TYN +I+GFC AG    A ++       G  
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P   TY+ LI      G+   A  +  E  E+G   S + Y  L+    +   + +A ++
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M + G SPD++TY ++++GLC  G + +A+ + N        P+   +N +I GYCK
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           + N  +A+ +L  M   G+ P++ +Y++ +  LC+  K          ML+ G  P++  
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533

Query: 563 YNIL 566
           YNIL
Sbjct: 534 YNIL 537



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 206/421 (48%), Gaps = 1/421 (0%)

Query: 150 FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           F  ++C  +   LF    +  +  D+ +F  LI   C+ G++ ++ ++ +++ + G  PN
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +  +   I G C+ G I+ A  L   I   GL     +Y  LICG  K+    +   +  
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM  +GV P+ +TYN +I+ +C  G +    K+  +   +    +  TY++LI GLC + 
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +  A  +  +    G   ++I YN L+ G    G   +A +L   +  +G SP + TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           +++    K G    A+ ++ +   +G  P   T+  LID + +  +M+KA E+   M   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G +PDV TY  L++GLC    +      F +M E    PN + YN++I  +CK+     A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQMLKLGLKPSVSLYNILYR 568
           + L  EM  +GL P+I +  + I  LC +G+  +A E+ +    +     S +++NI+  
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610

Query: 569 A 569
           A
Sbjct: 611 A 611



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 232/540 (42%), Gaps = 62/540 (11%)

Query: 9   GQALTLNLISRMAKLP-------PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSH 61
           GQ    N +S  A +         ++A+ LF+   +QG+     + + ++ +L  K +  
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSL---LCH----------LTQLFPSSSNPVTKSRL 108
               ++ L  K++   +  + FT       LC           L  +      P   S  
Sbjct: 234 E---SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS-- 288

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K     +A  Y H+M++SGV P   T+N+++    K+           +  
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D +++  LI G C  GD+N+A  V  +  E GF  ++++Y +L+ G  K G + 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + + E G      TY +++ GL K G   D           G  P ++T+N LI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC +  + +  ++ D M    +  +V+TYNTL+ GLCK  ++         M   G +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT-------------------- 387
           PN+ITYN LI+ FC   +  +A  LF ++K+ G +P +VT                    
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 388 ----------------YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
                           +N++I AF +  N  MA  L  +M      P   TY ++IDS+ 
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++ +++ A          G  P   T G +++ LC+   + EA  + N M +  + P +V
Sbjct: 649 KTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 2/378 (0%)

Query: 194 AFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQHTYTVL 251
           A ++ NQ++ E GF   +  Y  +I+    +G  E  + +  ++ + +     +  Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    + G  ++    +E+M      PS+ +YN +++     G  S+  K++  M+   +
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V T+   +   C   R   A RLL+ M   G   N ++Y  +I GF       +A+ 
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF+++   G  P ++T+N LI    K GN + +  L  ++ +RG+ P+  T+ I I    
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R   +++A  +   +   G +PDV +Y  LI G C    + EA    + M  + +EPN+ 
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN +I G+CK G    A ++L +   KG +P+  +YSS I  LC DG    A  +  + 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 552 LKLGLKPSVSLYNILYRA 569
           ++ G K S+ LYN L + 
Sbjct: 383 MEKGFKHSIILYNTLVKG 400


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 228/444 (51%), Gaps = 8/444 (1%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGC 185
           +QM   G+ P   T N   I +   C  ++    FS     ++L    D  +F  LI+G 
Sbjct: 93  NQMDSFGIPPDVYTLN---ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL 149

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G +  A  + +++   GF PNVV Y +LI+G CK G+   A  L R + +       
Sbjct: 150 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 209

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT +I  L K+    + F  + KM   G+SP ++TY  LIH  CN  +      L ++
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M + ++  +VV ++T++  LCKE ++ EA  ++D M + G+ PNV+TYN L+DG C   E
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A ++F+ +  NG +P+V++YN LI  + K      A+ L  EM ++ + P+ VTY  
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        ++ A  ++  M   G  PD+ TY +L+  LC K ++ EA  L  ++  + 
Sbjct: 390 LMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 448

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           ++P+  +Y ++I G C+ G    A  +   ++ KGL PN+ +Y+  I  LC+ G   EA 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M   G  P    YN + + 
Sbjct: 509 KLFMEMDGNGCSPDGCTYNTITQG 532



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 222/444 (50%), Gaps = 37/444 (8%)

Query: 131 QMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
           ++L  G +P + TF +L+    ++    D   LF        + +V ++G LI G C+ G
Sbjct: 129 KILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVG 188

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           + N A  +L  +E+    P+VV+YTS+ID  CK+  +  A  LF K+   G+     TYT
Sbjct: 189 NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYT 248

Query: 250 VLI------C-----------------------------GLFKNGLQKDGFEFYEKMQLN 274
            LI      C                              L K G   +  +  + M + 
Sbjct: 249 SLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 308

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV P++ TYN L+  +C + ++ E  K+FD M H   A NV++YNTLI G CK  R+ +A
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKA 368

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             L ++M    + PN +TYN L+   C  G    A  LF+++ ++GQ P + TY +L+  
Sbjct: 369 TYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 427

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K  +   A  L++ +E   + P    YTI+ID   R+ ++E A +++S +   G  P+
Sbjct: 428 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 487

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY ++I+GLC +G + EA+KLF  M      P+   YN +  G  +   + RA++LL 
Sbjct: 488 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547

Query: 515 EMNEKGLVPNIASYSSTIGVLCQD 538
           EM  +G   ++++ +  + +LC D
Sbjct: 548 EMLARGFSADVSTTTLLVEMLCDD 571



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 188/389 (48%), Gaps = 1/389 (0%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  L+    +       F + NQ++  G  P+V     LI+  C    +  A  +  KI 
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           +LG      T+T LI GL   G   D    ++KM   G  P++ TY  LI+  C  G  +
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
              +L   M       +VV Y ++I  LCK+ +V EA  L  +M   GISP++ TY  LI
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C+  E      L NQ+ ++   P VV ++ ++ A  K G    A D+V  M  RG+ 
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ VTY  L+D      +M++A +++  M  +G++P+V +Y  LI+G C    M +A+ L
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M + +L PN V YN ++   C  G    A+ L  EM   G +P++A+Y   +  LC+
Sbjct: 372 FEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                EA  LL  +    + P + +Y I+
Sbjct: 431 KSHLDEAMALLKTIEGSNMDPDIQIYTIV 459



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 148/304 (48%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D    + +M      PS   +N L+       +    F L ++M    +  +V T N LI
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C   R+  A  +L ++   G  P+  T+  LI G C  G+   A  LF+++   G  
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  LI    K GN+  A  L+R ME+    P  V YT +IDS  +   + +AF +
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 231

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +S M   G SPD++TY  LIH LC     K  + L N M  +K+ P+ V+++ ++   CK
Sbjct: 232 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 291

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG    A  ++  M  +G+ PN+ +Y++ +   C   +  EA  + + M+  G  P+V  
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351

Query: 563 YNIL 566
           YN L
Sbjct: 352 YNTL 355



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F  + H       + +NTL           +A    ++M      P+ + +N+L+     
Sbjct: 32  FSSLSHNRFHSKSLNFNTL----------DDALSSFNRMLHMHPPPSTVDFNRLLTSIAK 81

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             +    F L NQ+ S G  P V T N+LI +F        A  ++ ++ + G  P   T
Sbjct: 82  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTAT 141

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +T LI        +  A  ++  M   GF P+V TYG LI+GLC  GN   A +L  SM 
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           +   +P+ VVY  +I   CK+     A  L  +M  +G+ P+I +Y+S I  LC   +W 
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWK 261

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
               LLNQM+   + P V +++ +  A
Sbjct: 262 HVTTLLNQMINSKIMPDVVIFSTVVDA 288



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 122/275 (44%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N   + +    F+ M H     + V +N L+  + K  +      L +QM   GI P+V 
Sbjct: 46  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 105

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T N LI+ FC       AF +  ++   G  P   T+  LIR     G    A  L  +M
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM 165

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P+ VTY  LI+   +  +   A  +   M++    PDV  Y  +I  LC    +
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 225

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA  LF+ M    + P+   Y  +I   C          LL +M    ++P++  +S+ 
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  LC++GK  EA  +++ M+  G++P+V  YN L
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 320



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 106/207 (51%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +N L+ + +K         L  +M+  GI P   T  IL
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF   + +  AF + + + K G  PD  T+  LI GLC++G + +A  LF+ M     
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 170

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK GN+  A+RLL  M +    P++  Y+S I  LC+D +  EA  
Sbjct: 171 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ P +  Y  L  +  N+
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNL 257


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 233/476 (48%), Gaps = 41/476 (8%)

Query: 130 HQMLDSGV---RPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCC 186
           H++L+  +   RP    + S++    K+   D G+  F     K  LDV S+  +IKG  
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGY--FRAVTPKASLDVISYTTVIKGLA 119

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           ++  +++A E+  +L+  G SPNVV YT++IDG  K G IE     F ++     V T+ 
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TYTV+I GL K  +  D  + +E+M   G  P   TY  LI  +    K+ E  KL D M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 307 RHREVACNVVTYNTLICGLCK-----------------------------------EMRV 331
             +      VTY +++ G CK                                   + R 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           +EA ++L +M   G +P+VI Y  LID     G   +A  +F+ +   G +P  +TY  +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I+ FSK GN + A +++  M + G+ P    Y  L+D +V+ + +++AF +Y  M  SG 
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRAL 510
            P+  T+ VL+HGL   G    A  LF  M E  ++ P  V Y ++I G  K G    A 
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               EM ++G++P   +Y+S I  L + G+ PEA+ L+  M+KLG+ P V  Y+ L
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 183/395 (46%), Gaps = 39/395 (9%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E  + S+  +I G      +++A++  N + + G  P+V+ +T+LI G CK G  +    
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  +                                     L    P ++ Y  +IH YC
Sbjct: 64  LLNQ------------------------------------ALKRFRPDVFLYTSVIHGYC 87

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G +  G+  F  +  +  + +V++Y T+I GL    R+ EA  L +++K AG SPNV+
Sbjct: 88  KAGDLDTGY--FRAVTPK-ASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVV 144

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  +IDG   AG  +   + F ++  +   P+  TY V+I    KA     A  +  +M
Sbjct: 145 AYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 204

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            ++G  P  +TYT LID F ++  M++A ++  +M   G  P   TYG ++HG C    +
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 264

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA ++   M E   EP   ++  ++  Y  +G +  A ++L EM  +G  P++  Y+S 
Sbjct: 265 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSL 324

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I +L   G+ PEA  + + M++ G  P    Y  +
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 2/422 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID  LK+   +  L  F +M  S   P   T+  ++  + K+         F +  
Sbjct: 146 YTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMV 205

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D  ++  LI G  +A  +++A ++L+ +   G  P  V Y S++ G CK   I 
Sbjct: 206 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMIN 265

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +  ++ E G       +T L+      G  ++ ++   +M   G +P +  Y  LI
Sbjct: 266 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 325

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               + G+V E   +FD M  +  A + +TY T+I    K   V+ A  +L+ M  +G+ 
Sbjct: 326 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+   YN L+DG+      D+AF +++++ ++G  P+ VT+NVL+    K G +  A  L
Sbjct: 386 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 445

Query: 408 VREM-EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +EM E+  + P+ V+YTILID   ++  + +AF  +  M   G  P+ +TY  LI+ L 
Sbjct: 446 FKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLA 505

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + EA KL   M +  + P+   Y+ +I G         A  +  EM ++G  PN  
Sbjct: 506 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 565

Query: 527 SY 528
           +Y
Sbjct: 566 TY 567



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 197/417 (47%), Gaps = 5/417 (1%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S S+ V     Y  +ID   K+++   A   F QM+  G  P + T+ +L+    K+   
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D+          K  E    ++G ++ G C+   +N+A EV+ Q+ E G  P + I+TSL
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +      G  E A  +  ++   G       YT LI  LF  G   +    ++ M   G 
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           +P   TY  +I  +   G V    ++ + M    V  +   YN+L+ G  K  RV +A  
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAF 395
           + D+M  +GI PN +T+N L+ G    G+TD+AF LF + L+     P++V+Y +LI   
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            KAG    A    +EM +RGI P   TYT LI S  ++  + +A ++   M K G +PDV
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
             Y  LI GL     +  A  +F  M +    PN+V Y ++  G+   G   RAL L
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG---RALDL 583



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 143/324 (44%), Gaps = 33/324 (10%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P++ +YN +I    +  K+ E +K F+ M       +V+ + TLI G CK  + Q  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGE----------------------------- 365
            +LL+Q  +    P+V  Y  +I G+C AG+                             
Sbjct: 62  HKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 366 ---TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
               D+A  LF +LK+ G SP+VV Y  +I    KAG  +       EM      P+  T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT++ID   ++  +  A +++  M + G  PD  TY  LI G      M EA KL + M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
               EP  V Y  ++ G+CK      A  ++ +M E+G  P +  ++S +      G+  
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA  +L +M   G  P V LY  L
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSL 324



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 35/230 (15%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D ++K    DQA   + +M+ SG++P + TFN                       
Sbjct: 391 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN----------------------- 427

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                      +L+ G  + G  ++AF +  + LE+    P +V YT LIDG  K G + 
Sbjct: 428 -----------VLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A + F+++ + G++   HTYT LI  L K G   +  +  E M   GV+P +  Y+ LI
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 536

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
               +   V   + +F EM  R  A N VTY  L  G     R  + E +
Sbjct: 537 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 231/438 (52%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D+A      ++  G+ P   ++N+L+    K     +   +  +     VE + +++  +
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+AG +  A ++L      GF P+   Y+SLI+G C +GD+ RA  +F +  E G 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +   Y  L+ GL K GL     +  + M  +G SP ++TYN +++  C  G +S+   
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + ++   +    ++ T+NTLI G CK+  + +A  +LD M   GI+P+VITYN L++G C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A + D     F  +   G +P+++TYN+LI +F K      A +L +EM+ RG+TP  V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           T   LI     + +++KA+E++  ++K   FS     + ++I+  C K N+  A KLF+ 
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M  +   P++  Y +MI  YCK GN   A   L E   KGLVP+  +    +  LC   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA V++N M++ G+ P
Sbjct: 688 LSEAVVIINLMVQNGIVP 705



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 233/490 (47%), Gaps = 37/490 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I    K     +A   F +ML  G+ P   TFN L+  + K  +  +    FS+  
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  ++++F I I+G C  G +++A  +L  +   G +P+V+ Y +LI G CK+  + 
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+    K+   G+   + TY  +I G  K G+ ++  +        G  P  +TY+ LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  CN+G ++    +F E   +    +++ YNTL+ GL K+  V +A +L+  M   G S
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 348 PNVITYN-----------------------------------KLIDGFCDAGETDKAFRL 372
           P++ TYN                                    LIDG+C     DKA  +
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S+G +P V+TYN L+    KA       D  + M E+G TP+ +TY ILI+SF +
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDV 491
              + +A E++  M+  G +PD+ T   LI GLC  G + +A +LF ++  E K   +  
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTA 603

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           ++N+MI  +C + N   A +L  +M      P+  +Y   I   C+ G    A   L + 
Sbjct: 604 IFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 552 LKLGLKPSVS 561
           +  GL PS +
Sbjct: 664 ISKGLVPSFT 673



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 249/544 (45%), Gaps = 28/544 (5%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           PL A  +FN   +  G +HT ++     + ++ K+  H    A   +L  +   + S   
Sbjct: 20  PLNALKMFNQVKTEDGFKHTLET----YKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                                   +Y  I+  + +     +A+  F +M      P   +
Sbjct: 76  ----------------------EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQS 113

Query: 144 FNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +N+++  +++   F +   ++       +  DVY+  I +K  C  G    A  +LN + 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G   N V Y ++I G  K      A  LF ++ + G+     T+  LI  L K G  +
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +  + + K+   GV P+L+T+N  I   C +G + E  +L + +    +  +V++YNTLI
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
           CG CK  ++ EAE  L +M  +G+ PN  TYN +I+GFC AG    A ++       G  
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P   TY+ LI      G+   A  +  E  E+G   S + Y  L+    +   + +A ++
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M + G SPD++TY ++++GLC  G + +A+ + N        P+   +N +I GYCK
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           + N  +A+ +L  M   G+ P++ +Y++ +  LC+  K          ML+ G  P++  
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533

Query: 563 YNIL 566
           YNIL
Sbjct: 534 YNIL 537



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 206/421 (48%), Gaps = 1/421 (0%)

Query: 150 FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           F  ++C  +   LF    +  +  D+ +F  LI   C+ G++ ++ ++ +++ + G  PN
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +  +   I G C+ G I+ A  L   I   GL     +Y  LICG  K+    +   +  
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM  +GV P+ +TYN +I+ +C  G +    K+  +   +    +  TY++LI GLC + 
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +  A  +  +    G   ++I YN L+ G    G   +A +L   +  +G SP + TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           +++    K G    A+ ++ +   +G  P   T+  LID + +  +M+KA E+   M   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G +PDV TY  L++GLC    +      F +M E    PN + YN++I  +CK+     A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQMLKLGLKPSVSLYNILYR 568
           + L  EM  +GL P+I +  + I  LC +G+  +A E+ +    +     S +++NI+  
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610

Query: 569 A 569
           A
Sbjct: 611 A 611



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 231/540 (42%), Gaps = 62/540 (11%)

Query: 9   GQALTLNLISRMAKLP-------PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSH 61
           GQ    N +S  A +         ++A+ LF+   +QG+     + + ++ +L  K +  
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSL---LCH----------LTQLFPSSSNPVTKSRL 108
               ++ L  K++   +  + FT       LC           L  +      P   S  
Sbjct: 234 E---SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS-- 288

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K     +A  Y H+M++SGV P   T+N+++    K+           +  
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D +++  LI G C  GD+N+A  V  +  E GF  ++++Y +L+ G  K G + 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + + E G      TY +++ GL K G   D           G  P ++T+N LI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC +  + +  ++ D M    +  +V+TYNTL+ GLCK  ++         M   G +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT-------------------- 387
           PN+ITYN LI+ FC   +  +A  LF ++K+ G +P +VT                    
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 388 ----------------YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
                           +N++I AF    N  MA  L  +M      P   TY ++IDS+ 
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++ +++ A          G  P   T G +++ LC+   + EA  + N M +  + P +V
Sbjct: 649 KTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 2/378 (0%)

Query: 194 AFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQHTYTVL 251
           A ++ NQ++ E GF   +  Y  +I+    +G  E  + +  ++ + +     +  Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    + G  ++    +E+M      PS+ +YN +++     G  S+  K++  M+   +
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V T+   +   C   R   A RLL+ M   G   N ++Y  +I GF       +A+ 
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF+++   G  P ++T+N LI    K GN + +  L  ++ +RG+ P+  T+ I I    
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R   +++A  +   +   G +PDV +Y  LI G C    + EA    + M  + +EPN+ 
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN +I G+CK G    A ++L +   KG +P+  +YSS I  LC DG    A  +  + 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 552 LKLGLKPSVSLYNILYRA 569
           ++ G K S+ LYN L + 
Sbjct: 383 MEKGFKHSIILYNTLVKG 400


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 238/463 (51%), Gaps = 1/463 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K + ++ +   +  +++  +AL  F  M   G      +    L+ + +    D    FF
Sbjct: 154 KEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF 213

Query: 165 SEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  VE+ VYS  I++ G C+ GD+    ++++++   G   NVV Y + I+G  K 
Sbjct: 214 RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 273

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            D+     +   + + G+     TYT+LI G    G  ++    +E+M+  G+   +Y Y
Sbjct: 274 LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 333

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I   C  G V     LFDEM  + +  +  TY  LI G+CK  +++ A+ L+++M+ 
Sbjct: 334 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 393

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            GI  N + +N LIDG+C++G  D+A RL   ++  G    V  YN +     K      
Sbjct: 394 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  M ERG++P+ +++T LID + +  +  +A  ++  M++ G  P++ TY VLI 
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 513

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G   +GNMKEA KL + +    L P+      +I G C +G    AL+L  EM ++GLVP
Sbjct: 514 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 573

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N+ +Y++ I  L +DG+  EA  L ++M + GL P  ++Y+ L
Sbjct: 574 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 616



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 184/417 (44%), Gaps = 64/417 (15%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAK-------MLFR----------------------- 234
           G    V +  SL+D  C      RAK       +LFR                       
Sbjct: 127 GLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGF 186

Query: 235 ----------------------------KIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                                       ++  L +  T ++ T+++ GL K G  + G +
Sbjct: 187 HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRK 246

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNE---GKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             +++   GV  ++ TYN  I  Y      G V+E   L   M    VACNVVTY  LI 
Sbjct: 247 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---MEKEGVACNVVTYTLLIH 303

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G     +++EA+RL ++M+  GI  +V  Y  +I   C +G   +A  LF+++   G  P
Sbjct: 304 GFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIP 363

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S  TY  LI    KAG  + A  LV EM+ +GI  + V +  LID +  S  +++A  + 
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 423

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            +M+K G   DV+ Y  +  GLC      EA  L  SM E  + PN + +  +I  YCKE
Sbjct: 424 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 483

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           GN   A R+  EM EKG VPNI +Y+  I    + G   EA  L +++   GL P V
Sbjct: 484 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDV 540


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 244/494 (49%), Gaps = 40/494 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++I ++ K      A  YF  +L+ G+ P + T N+L++   ++    K  WLF    
Sbjct: 71  YNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP 130

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + + YS+ ILI+G C+A  + KA  +   ++  G SPNV  +T LI G CK+G + 
Sbjct: 131 LMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVG 190

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A++LF  + + G+V +  TY  +I G  K G   D  +  E M+ NG  P  +TYN LI
Sbjct: 191 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC--------------------- 326
           +  C++ K  E  +L +          VVT+  LI G C                     
Sbjct: 251 YGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCK 309

Query: 327 --------------KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                         K+ R++EA+ LL+++   G+ PNVITY  +IDG+C +G+ D A  +
Sbjct: 310 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 369

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              ++ +G  P+  TYN L+    K      A  L+ +M++ GI P+ +TYT L+     
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D + AF ++ +M+++G  PD + Y VL   LC  G  +EA   ++ +    +    V 
Sbjct: 430 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVY 486

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  +I G+ K GN+  A  L+  M ++G  P+  +YS  +  LC+  +  EA  +L+QM 
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 553 KLGLKPSVSLYNIL 566
             G+K ++  Y IL
Sbjct: 547 LRGIKCTIFAYTIL 560



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 221/509 (43%), Gaps = 88/509 (17%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SIID + KS   D AL     M   G +P + T+NSL+  ++K    DK         
Sbjct: 350 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK----DK--------- 396

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                                 L+KA  +L ++++ G  PNV+ YT+L+ G C   D + 
Sbjct: 397 ---------------------KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  + + GL   +H Y VL   L K G  ++ + F  +    GV+ +   Y  LI 
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLID 492

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G       L + M       +  TY+ L+  LCK+ R+ EA  +LDQM + GI  
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +  Y  LID     G+ D A R++N++ S+G  PS  TY V I ++ K G  + A DL+
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 409 REMEERGITPSEVTYTILID---------------------------------------- 428
            +ME  G+ P  VTY ILID                                        
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 672

Query: 429 --SFVRSDD---------MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
             ++VRS D         ++  +++   M K G +P V TY  LI G C  G ++EA  L
Sbjct: 673 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 732

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            + M    L PN+ +Y ++I   C      +AL  +  M+E G  P + SY   +  LC 
Sbjct: 733 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 792

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G + + + L   +L+LG       + IL
Sbjct: 793 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 821



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 225/506 (44%), Gaps = 63/506 (12%)

Query: 121 LSDQALFYFHQMLDSGVR----PRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVEL 173
           L DQ      ++L++ V+    P   TF +L+     +  FD      ++   ++CK++L
Sbjct: 253 LCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            V  FG LI    +   L +A E+LN++   G  PNV+ YTS+IDG CK+G ++ A  + 
Sbjct: 313 QV--FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 370

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + +   G      TY  L+ GL K+           KMQ +G+ P++ TY  L+   C+E
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 430

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                 F+LF+ M    +  +   Y  L   LCK  R +EA   + +    G++   + Y
Sbjct: 431 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYY 487

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDGF  AG TD A  L  ++   G +P   TY+VL+ A  K      A  ++ +M  
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI  +   YTILID  +R    + A  MY+ M  SG  P   TY V I+  C +G +++
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 607

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL----------------------- 510
           A  L   M    + P+ V YN++I G    G   RA                        
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 667

Query: 511 ----------------------------RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                                       +LL  M + GL P + +YSS I   C+ G+  
Sbjct: 668 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 727

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYR 568
           EA +LL+ M   GL P+  +Y +L +
Sbjct: 728 EACLLLDHMCGKGLSPNEDIYTLLIK 753



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 223/497 (44%), Gaps = 38/497 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---F 163
           R +  +I    KS     A   F  M  +GV P   T+N++++   K    +        
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 233

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             +N C    D +++  LI G C+     +A E+LN   + GF+P VV +T+LI+G C  
Sbjct: 234 MEKNGCHP--DDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 290

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + A  +  K+           +  LI  L K    K+  E   ++  NG+ P++ TY
Sbjct: 291 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 350

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I  YC  GKV    ++   M       N  TYN+L+ GL K+ ++ +A  LL +M+ 
Sbjct: 351 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 410

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP-------------------- 383
            GI PNVITY  L+ G CD  + D AFRLF  ++ NG  P                    
Sbjct: 411 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 470

Query: 384 ------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
                       + V Y  LI  FSKAGN+  A+ L+  M + G TP   TY++L+ +  
Sbjct: 471 AYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 530

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   + +A  +   M   G    ++ Y +LI  +  +G    A +++N M  +  +P+  
Sbjct: 531 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 590

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y + I  YCKEG    A  L+ +M  +G+ P++ +Y+  I      G    A   L +M
Sbjct: 591 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 650

Query: 552 LKLGLKPSVSLYNILYR 568
           +    +P+   Y +L +
Sbjct: 651 VGASCEPNYWTYCLLLK 667



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 184/374 (49%), Gaps = 1/374 (0%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V +QL + G  P+ V Y ++I   CK GD+  A   FR + E GL     T   L+ G  
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           + G  +     +  M L G   + Y+Y  LI   C+   V +   LF  M+    + NV 
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            +  LI GLCK  RV +A  L D M   G+ P+V+TYN +I G+   G  + A ++   +
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           + NG  P   TYN LI        ++ A +L+    + G TP+ VT+T LI+ +  ++  
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A  M + M  S    D+  +G LI+ L  K  +KEA +L N +    L PN + Y  +
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 353

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I GYCK G    AL +L  M   G  PN  +Y+S +  L +D K  +A  LL +M K G+
Sbjct: 354 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413

Query: 557 KPSVSLYNILYRAK 570
            P+V  Y  L + +
Sbjct: 414 IPNVITYTTLLQGQ 427



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 1/396 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +IK  C+ GDL  A      L E G  P      +L+ G C+ G++ +A  LF
Sbjct: 67  DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLF 126

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +  +G    +++YT+LI GL      +     +  M+ +G SP++  +  LI   C  
Sbjct: 127 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 186

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V +   LFD M    V  +V+TYN +I G  K  R+ +A ++ + M+  G  P+  TY
Sbjct: 187 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTY 246

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI G CD  +T++A  L N     G +P+VVT+  LI  +  A     A  +  +M  
Sbjct: 247 NTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 305

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
                    +  LI+S ++ D +++A E+ + +  +G  P+V TY  +I G C  G +  
Sbjct: 306 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++   M     +PN   YN +++G  K+   ++A+ LL +M + G++PN+ +Y++ + 
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 425

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C +  +  A  L   M + GLKP    Y +L  A
Sbjct: 426 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 461



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 163/369 (44%), Gaps = 36/369 (9%)

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            R+ G   L  +   Y   +  L +  + +     Y ++  +G+ P   TYN +I  YC 
Sbjct: 21  IRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCK 80

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EG ++   + F  +    +     T N L+ G C+   +++A  L   M + G   N  +
Sbjct: 81  EGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYS 140

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G CDA    KA  LF  +K +G SP+V  +  LI    K+G    A  L   M 
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           + G+ PS +TY  +I  + +   M  A ++  LM+K+G  PD +TY  LI+GLC +   +
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTE 259

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR--------------------- 511
           EA +L N+  +    P  V +  +I GYC       ALR                     
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319

Query: 512 --------------LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
                         LL E++  GLVPN+ +Y+S I   C+ GK   A  +L  M + G +
Sbjct: 320 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 379

Query: 558 PSVSLYNIL 566
           P+   YN L
Sbjct: 380 PNAWTYNSL 388



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 19/375 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+  +D A     +M+D G  P S T++ LL  + K    ++      +  
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++  ++++ ILI      G  + A  + N++   G  P+   YT  I+  CK G +E
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  K+   G+     TY +LI G    G     F   ++M      P+ +TY CL+
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLL 665

Query: 288 HEYCNEGKVSE-----------------GFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
            ++  +G ++                   ++L + M    +   V TY++LI G CK  R
Sbjct: 666 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 725

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA  LLD M   G+SPN   Y  LI   CD    +KA    + +   G  P + +Y +
Sbjct: 726 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 785

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+      G+ +    L  ++ E G    EV + IL D  +++  ++  F+M S+M+K  
Sbjct: 786 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY 845

Query: 451 FSPDVYTYGVLIHGL 465
                 TY ++ + +
Sbjct: 846 CCISSQTYALVTNKM 860



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 43/279 (15%)

Query: 327 KEMRVQ----EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
           ++MRV     +A R     ++A +SP    YN  +        T+   R+++QL  +G  
Sbjct: 9   EDMRVSADAIQAIRRTGSARLA-LSPKC--YNFALRSLARFDMTEYMGRVYSQLVQDGLL 65

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  VTYN +I+++ K G+   A    R + E G+ P   T   L+  + R+ ++ KA  +
Sbjct: 66  PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 125

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLC--------------MK-------------------- 468
           + +M   G   + Y+Y +LI GLC              MK                    
Sbjct: 126 FLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCK 185

Query: 469 -GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A  LF++M +  + P+ + YN MI GY K G    AL++   M + G  P+  +
Sbjct: 186 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 245

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I  LC D K  EAE LLN  +K G  P+V  +  L
Sbjct: 246 YNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNL 283



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 149/381 (39%), Gaps = 39/381 (10%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLT-QLFPSSSNPVTKSR----------LYESIID 114
           A TLI ++I    T  S+T   LL  L  Q   + + P+               Y  +ID
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 562

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFFSENRCK 170
             L+    D A   +++M  SG +P + T+    +F+   C      D   L     R  
Sbjct: 563 EMLREGKHDHAKRMYNEMTSSGHKPSATTYT---VFINSYCKEGRLEDAEDLILKMEREG 619

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG------ 224
           V  DV ++ ILI GC   G +++AF  L ++      PN   Y  L+    K        
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679

Query: 225 ----------DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
                     +++    L  ++ + GL  T  TY+ LI G  K G  ++     + M   
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+SP+   Y  LI   C+     +       M        + +Y  L+ GLC E   ++ 
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 799

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + L   +   G + + + +  L DG   AG  D  F++ + ++      S  TY ++   
Sbjct: 800 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNK 859

Query: 395 FSKAGNSKMASDLVREMEERG 415
                  +++S LV E+ E  
Sbjct: 860 M-----HEVSSSLVSEVREEA 875


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 238/463 (51%), Gaps = 1/463 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K + ++ +   +  +++  +AL  F  M   G      +    L+ + +    D    FF
Sbjct: 158 KEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF 217

Query: 165 SEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  VE+ VYS  I++ G C+ GD+    ++++++   G   NVV Y + I+G  K 
Sbjct: 218 RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 277

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            D+     +   + + G+     TYT+LI G    G  ++    +E+M+  G+   +Y Y
Sbjct: 278 LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 337

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I   C  G V     LFDEM  + +  +  TY  LI G+CK  +++ A+ L+++M+ 
Sbjct: 338 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 397

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            GI  N + +N LIDG+C++G  D+A RL   ++  G    V  YN +     K      
Sbjct: 398 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  M ERG++P+ +++T LID + +  +  +A  ++  M++ G  P++ TY VLI 
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 517

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G   +GNMKEA KL + +    L P+      +I G C +G    AL+L  EM ++GLVP
Sbjct: 518 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 577

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N+ +Y++ I  L +DG+  EA  L ++M + GL P  ++Y+ L
Sbjct: 578 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 620



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/414 (34%), Positives = 215/414 (51%), Gaps = 1/414 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D  L +F +M++  V     +   +L  + K    + G     E   K V+ +V ++   
Sbjct: 211 DSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAF 270

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I+G  +  DL    E+L  +E+ G + NVV YT LI G    G IE A+ LF ++ E G+
Sbjct: 271 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 330

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
            A  + YT +I    ++G  K     +++M   G+ PS +TY  LIH  C  G++     
Sbjct: 331 EADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 390

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L +EM+ + +  N V +NTLI G C+   V EA RL   M+  G+  +V  YN +  G C
Sbjct: 391 LVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLC 450

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                D+A  L   +   G SP+ +++  LI  + K GN   A  + REMEE+G  P+ +
Sbjct: 451 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNII 510

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY +LID + +  +M++A ++   ++  G  PDVYT   LIHG C+ G +  A KLF+ M
Sbjct: 511 TYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM 570

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +  L PN V Y  MI G  K+G S  A +L  EM E GL P+   YSS +G L
Sbjct: 571 PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 184/417 (44%), Gaps = 64/417 (15%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAK-------MLFR----------------------- 234
           G    V +  SL+D  C      RAK       +LFR                       
Sbjct: 131 GLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGF 190

Query: 235 ----------------------------KIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                                       ++  L +  T ++ T+++ GL K G  + G +
Sbjct: 191 HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRK 250

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNE---GKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             +++   GV  ++ TYN  I  Y      G V+E   L   M    VACNVVTY  LI 
Sbjct: 251 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---MEKEGVACNVVTYTLLIH 307

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G     +++EA+RL ++M+  GI  +V  Y  +I   C +G   +A  LF+++   G  P
Sbjct: 308 GFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIP 367

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S  TY  LI    KAG  + A  LV EM+ +GI  + V +  LID +  S  +++A  + 
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 427

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            +M+K G   DV+ Y  +  GLC      EA  L  SM E  + PN + +  +I  YCKE
Sbjct: 428 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 487

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           GN   A R+  EM EKG VPNI +Y+  I    + G   EA  L +++   GL P V
Sbjct: 488 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDV 544



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 165/314 (52%), Gaps = 1/314 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGIL 181
           ++A   F +M + G+      + S++    +S +  +  + F E   K  +   +++G L
Sbjct: 316 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 375

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+AG +  A  ++N+++  G   N VI+ +LIDG C++G ++ A  L   + + GL
Sbjct: 376 IHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL 435

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
            +    Y  +  GL K   + +       M   GVSP+  ++  LI  YC EG   E  +
Sbjct: 436 ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKR 495

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F EM  +    N++TYN LI G  K   ++EA +L D+++  G+ P+V T   LI G C
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 555

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+ D A +LF+++   G  P+VVTY  +I   SK G S+ A  L  EM+E G+TP + 
Sbjct: 556 IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 615

Query: 422 TYTILIDSFVRSDD 435
            Y+ L+ S   +D+
Sbjct: 616 VYSSLVGSLHSADE 629



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 155/295 (52%), Gaps = 1/295 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y SII  + +S    +AL  F +M D G+ P ++T+ +L+  V K+   +   +  +E 
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K ++L+   F  LI G CE+G +++A  +   +E+ G   +V  Y S+  G CK    
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + AK L   + E G+     ++T LI    K G   +    + +M+  G  P++ TYN L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y   G + E  KL DE+ +R +  +V T  +LI G C + +V  A +L D+M   G+
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            PNV+TY  +I G    G +++AF+L++++K  G +P    Y+ L+ +   A  S
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADES 630


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 245/487 (50%), Gaps = 53/487 (10%)

Query: 91  HLTQLFPSSSNPVTKSRLYE---SIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNS 146
           H +Q + + +N ++  ++++   SII   +  +  D A   F  +LD+ G R  +  F++
Sbjct: 99  HTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDA 158

Query: 147 LLIFVIKSCSFDKGWL------FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           L+I       +D G++      F        ++  +  G L+     +      +   ++
Sbjct: 159 LMI-----AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + E GF P V  Y  LI+  CK G I  AK++F +I + GL  T  ++  LI GL K+  
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT--- 317
             +GF   + M+ N + P ++TY+ LIH  C EG++    +LFDEM+ R +  N +T   
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 318 --------------------------------YNTLICGLCKEMRVQEAERLLDQMKMAG 345
                                           YNTL+ GLCK   V +A +L+D+MKM G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ ITY  LIDG+C  G+ + A  +   +   G     V +  LI  F + G  + A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +REM E G+ P + TYT++ID + +  +++  F++   MQ +G  P V TY VL++GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G MK A+ L  +M    + P+D+ YN+++ G+CK G   +A  LL   NEKGL+ + 
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDY 570

Query: 526 ASYSSTI 532
           A Y+S +
Sbjct: 571 AYYTSLV 577



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 231/497 (46%), Gaps = 69/497 (13%)

Query: 30  SLFNW-ASRQGLQHTPQSISI----------------ILRLLLSKMSSHSHAAAQTLILK 72
           S FNW +S    +HT QS                   I+R L+S+    S A+    IL 
Sbjct: 86  SFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILD 145

Query: 73  IISGRITS------------SSFTPRSLLC-----------------HLTQLFPSSSNPV 103
               R ++            S F   ++ C                 +L     +S++PV
Sbjct: 146 TAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPV 205

Query: 104 T---------------KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           T               K + Y  +I+   K      A   F+++   G+RP + +FN+L+
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 149 IFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
             + KS + D+G+       ENR  +  DV+++ +LI G C+ G L+ A ++ +++++ G
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENR--IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
             PN + +T+LIDG  ++  ++ A   + ++  +G+      Y  L+ GL K G      
Sbjct: 324 LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           +  ++M++ G+ P   TY  LI  YC EG +    ++   M    V  + V +  LI G 
Sbjct: 384 KLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C++ RV++AER L +M  AG+ P+  TY  +IDG+C  G     F+L  +++ NG  P V
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           +TYNVL+    K G  K A+ L+  M   G+TP ++TY IL++   ++    KA ++  L
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKL 560

Query: 446 MQKSGFSPDVYTYGVLI 462
             + G   D   Y  L+
Sbjct: 561 RNEKGLIVDYAYYTSLV 577



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 37/364 (10%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF- 163
           K + Y  +I+   K      A   F+++   G+RP + +FN+L+  + KS + D+G+   
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281

Query: 164 --FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
               ENR  +  DV+++ +LI G C+ G L+ A ++ +++++ G  PN + +T+LIDG  
Sbjct: 282 KTMEENR--IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           ++  ++ A   + ++  +G+      Y  L+ GL K G      +  ++M++ G+ P   
Sbjct: 340 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKI 399

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI  YC EG +    ++   M    V  + V +  LI G C++ RV++AER L +M
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG-- 399
             AG+ P+  TY  +IDG+C  G     F+L  +++ NG  P V+TYNVL+    K G  
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM 519

Query: 400 -NSKM-----------------------------ASDLVREMEERGITPSEVTYTILIDS 429
            N+ M                             A DL++   E+G+      YT L+  
Sbjct: 520 KNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSE 579

Query: 430 FVRS 433
           + +S
Sbjct: 580 YNKS 583


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/465 (32%), Positives = 237/465 (50%), Gaps = 36/465 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  IID   K R  D+A   F +M   G+ P   ++ +L+     S  ++K    F+E  
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ DV +  +LI   C+ G + +A ++L  + + G  P+VV  T+L+ G C    I 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  LF K+ +LG +    T   L+ GL ++G  K   E ++ M L+  SP  Y  NC  
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM-LSDTSP--YGINC-- 479

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                                     N ++Y+ +I GLCK  R  EA  L  +MK  G+ 
Sbjct: 480 ------------------------KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI+Y  LI GFC +G+   A  LFN++   G  P V T++VLI    K G    A++L
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M +RG  P+ VTYT L+     +D + +A +++  MQK G  PDV TYG L+ GLC 
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 468 KGNMKEASKLFNSM------WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
            GN+K A +L   M      + T  +P+ + Y+++I G CK G    A  L  EM   G+
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +PN+ SY+S I   C+ GK  +A+ L N+M+  G++ +   Y+++
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 253/506 (50%), Gaps = 59/506 (11%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN--------- 167
           +K R+S +A   F  M   G RP +  + +L+  + ++   +       E          
Sbjct: 57  MKHRIS-EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 115

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +CK  L   S+ I+I G C+    ++A E+  +++  G  P+V+ YTSLI G C++G  E
Sbjct: 116 KCKPTL--VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWE 173

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +AK LF ++ ++G+ +   T ++LI  L K G   +  E  E M   G    + TY+ LI
Sbjct: 174 KAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 233

Query: 288 HEYCNEGKVSEGFKLFDEMR------------------------------HRE------- 310
              C + ++SE  +LF  M+                              H+E       
Sbjct: 234 KGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293

Query: 311 --VAC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + C   +++Y+ +I GLCK+ R  EA  L  +MK  GI P+VI+Y  LI GFC +G+ 
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           +KA  LFN++   G  P V T +VLI    K G    A+ L+  + +RG  P  VT T L
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM----- 481
           +        + KA +++  MQK G  P+V T   L+ GLC  GN+K A +L  +M     
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 482 -WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            +    +PN + Y+++I G CK G    A  L  EM   G++P++ SY+S I   C+ GK
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
           W +A+ L N+M+ +G++P V+ +++L
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVL 559



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 253/479 (52%), Gaps = 23/479 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I    +S   ++A   F++MLD G+R    T + L+  + K     +G +  +   
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCK-----EGKVIEANEL 213

Query: 169 CKVE------LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +V       LD+ ++  LIKG C    +++A  +   ++++G  P+ + Y +L+ G C+
Sbjct: 214 LEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQ 273

Query: 223 NGDIERAKMLFRKI----GELGLVA--TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            G+I  A  L +++    G  G+    T  +Y+++I GL K+  + +  E +++M+  G+
Sbjct: 274 TGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 333

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + +Y  LIH +C  GK  +   LF+EM    +  +V T + LI  LCK+ +V EA +
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL+ +   G  P+V+T   L+ G C      KA +LF +++  G  P+VVT   L++   
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453

Query: 397 KAGNSKMASDLVREM----EERGIT--PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++GN K+A +L + M       GI   P+ ++Y+I+ID   +    ++A E++  M+  G
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 513

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PDV +Y  LIHG C  G  K+A  LFN M +  ++P+   ++++I   CKEG    A 
Sbjct: 514 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEAN 573

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LL  M ++G +PN  +Y++ +  LC + +  EA  L  +M KLG  P V  Y  L + 
Sbjct: 574 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 632



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 225/420 (53%), Gaps = 23/420 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I     S   ++A   F++MLD G++P   T + L+  + K     KG +  +   
Sbjct: 340 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK-----KGKVIEANKL 394

Query: 169 CKVEL------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +V +      DV +   L+KG C    ++KA ++  +++++G  PNVV   +L+ G C+
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454

Query: 223 NGDIERA----KMLFRKIGELGLVATQH--TYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +G+I+ A    K +       G+    +  +Y+++I GL K G + +  E +++M+  GV
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + +Y  LIH +C  GK  +   LF+EM    V  +V T++ LI  LCKE +V EA  
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL+ M   G  PN +TY  L+ G C      +A +LF +++  G  P VVTY  L++   
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 397 KAGNSKMASDLVREM-EERG-----ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           + GN K A +L ++M  + G       P  ++Y+I+ID   +    ++A E++  M+  G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V +Y  LIHG C  G +++A  LFN M +  ++ N V Y++MI G+CKEG   +AL
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 190/375 (50%), Gaps = 12/375 (3%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           +G  P+V     LID  CK G +  A  L   + + G +    TY+ LI GL       +
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE----VAC--NVVT 317
             + +  M+  G  P    Y  L+   C  GK++    L  EM +      + C   +V+
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y+ +I GLCK+ R  EA  L  +MK  G+ P+VI+Y  LI GFC +G+ +KA  LFN++ 
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    V T ++LI    K G    A++L+  M +RG     VTY+ LI        + 
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM------WETKLEPNDV 491
           +A  ++  MQK G  PD   YG L+ GLC  GN+  A +L   M      +  K +P  +
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+++I G CK+     A  L  EM  +G++P++ SY++ I   C  GKW +A+ L N+M
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 552 LKLGLKPSVSLYNIL 566
           L +G++P V+  ++L
Sbjct: 364 LDVGIQPDVTTSSVL 378



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 213/437 (48%), Gaps = 47/437 (10%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ DV + G+LI   C+ G + +A E+L  + + G   ++V Y++LI G C    I  A 
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 231 MLFRKIGELG-----------------------------------------LVATQHTYT 249
            LF  + +LG                                            T  +Y+
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           ++I GL K+  + +  E +++M+  G+ P + +Y  LIH +C  GK  +   LF+EM   
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +V T + LI  LCKE +V EA  LL+ M   G   +++TY+ LI G C      +A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM----EERGI--TPSEVTY 423
            RLF  ++  G  P  + Y  L++   + GN   A  L +EM       GI   P+ ++Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           +I+ID   +    ++A E++  M+  G  PDV +Y  LIHG C+ G  ++A  LFN M +
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             ++P+    +++I   CK+G    A +LL  + ++G +P++ + ++ +  LC   +  +
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425

Query: 544 AEVLLNQMLKLGLKPSV 560
           A  L  +M KLG  P+V
Sbjct: 426 ATQLFLKMQKLGCMPNV 442



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 134/270 (49%), Gaps = 6/270 (2%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M H  +  +V T   LI   CKE +V EA  LL+ M   G   +++TY+ LI G C    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM----EERGIT--PS 419
             +A +LF  +K  G  P  + Y  L++   + G   +A  L +EM     + GI   P+
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V+Y+I+ID   +    ++A E++  M+  G  PDV +Y  LIHG C  G  ++A  LFN
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +  +  +    +M+I   CKEG    A  LL  M ++G + +I +YS+ I  LC   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  EA  L   M KLG +P    Y  L + 
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKG 270



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 9/295 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L+   P   N    +  Y  IID   K    D+A   F +M   GV P   ++ SL+   
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528

Query: 152 IKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +S  + D  +LF       V+ DV +F +LI   C+ G + +A E+L  + + G  PN 
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V YT+L+ G C N  I  A  LF K+ +LG +    TY  L+ GL + G  K   E ++K
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 648

Query: 271 MQLN------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           M  +         P + +Y+ +I   C  G+  E  +LF EM+   V  NV++Y +LI G
Sbjct: 649 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 708

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            C+  ++++A+ L ++M   G+  N +TY+ +I GFC  G+ DKA  LF ++++N
Sbjct: 709 FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 237/464 (51%), Gaps = 3/464 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K++   +A+    +M  +G  P S T  +L+  + K    D+        +
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + DV  +G LI G C  G+L++  E+ +++   G S NVV Y+ L+ G C+ G  +
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   + E G+     TYT LI GL K+G      +    M   G  PS  TYN L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
              C EG V + FK+   M  +    +VVTYNTL+ GLC + +V EA +L + M      
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PNV T+N LI G C  G   KA ++  ++   G   ++VTYN+L+    KAG  K A 
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L +++ + G  P+  TY+ILID F +   +  A  ++  M+  G +P ++ Y  L+  L
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G++++A  LF  M     EP+ + +N MI G  K G+      L  +M E GL P+ 
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++S+ I  L + G+  EA+  L +M+  G  P   +Y+ L + 
Sbjct: 602 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 233/449 (51%), Gaps = 9/449 (2%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVY-SFG--- 179
           +A+  FH  LD  + P   T N L+  + +S ++    L FS  R    +DV  SFG   
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYG---LAFSVYRRMTHVDVLPSFGSLS 113

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            LI+   +A      F V+  + + GF+ NV I   ++ G C+NG +  A  L R++G  
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +     +Y  LI GL K    K+      +M+  G  P+  T   L+   C +G++ E 
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            +L + M+ +    +VV Y TLI G C    +   + L D+M   GIS NV+TY+ L+ G
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G+  +A  + N +  +G  P VVTY  LI    K G +  A DL+  M E+G  PS
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY +L+    +   +  AF++  +M + G   DV TY  L+ GLC KG + EA KLFN
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 480 SMWETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           SM++ +  LEPN   +NM+I G CKEG   +A+++  +M +KG   N+ +Y+  +G   +
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            GK  EA  L  Q+L LG  P+   Y+IL
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSIL 502



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 215/463 (46%), Gaps = 10/463 (2%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
           FP+S    T       ++D   K    D+A+     M   G       + +L+     + 
Sbjct: 211 FPNSVTCTT-------LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 263

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           + D+G   F E   K +  +V ++  L+ G C  G   +A  VLN + E G  P+VV YT
Sbjct: 264 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 323

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LIDG CK+G    A  L   + E G   +  TY VL+ GL K GL  D F+    M   
Sbjct: 324 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 383

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQ 332
           G    + TYN L+   C++GKV E  KLF+ M   E  +  NV T+N LI GLCKE R+ 
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A ++  +M   G   N++TYN L+ G   AG+  +A  L+ Q+   G  P+  TY++LI
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F K     +A  L  EM   G+ P+   Y  L+ S  +   +E+A  ++  M  +   
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD+ ++  +I G    G+ +   +L   M E  L P+ + ++ +I    K G    A   
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           L  M   G  P+   Y S +  L   G   E   LL+QM   G
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 172/347 (49%)

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           N     A  LF    +  L+ +  T   L+  L ++      F  Y +M    V PS  +
Sbjct: 52  NSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGS 111

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
            + LI  + +  K   GF +   +  R    NV   N ++ GLC+   V EA  L+ +M 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
              +SP++++YN LI+G C A +  +A  L  ++++ G  P+ VT   L+    K G   
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A +L+  M+++G     V Y  LI  F  + ++++  E++  M   G S +V TY  L+
Sbjct: 232 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HGLC  G  KEA+ + N+M E  + P+ V Y  +I G CK+G +  A+ LL  M EKG  
Sbjct: 292 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+  +Y+  +  LC++G   +A  +L  M++ G K  V  YN L + 
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 398



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 169/366 (46%), Gaps = 13/366 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF--FSE 166
           Y  +ID   K   +  A+   + M++ G  P + T+N LL  + K     +G +   F  
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK-----EGLVIDAFKI 376

Query: 167 NRCKVE----LDVYSFGILIKGCCEAGDLNKAFEVLNQL--EEMGFSPNVVIYTSLIDGC 220
            R  +E     DV ++  L+KG C+ G +++A ++ N +   E    PNV  +  LI G 
Sbjct: 377 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 436

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G + +A  + RK+ + G      TY +L+ G  K G  K+  E ++++   G  P+ 
Sbjct: 437 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 496

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +TY+ LI  +C    ++    LF EMR   +   +  YNTL+  LCKE  +++A+ L  +
Sbjct: 497 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 556

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M  A   P++I++N +IDG   AG+      L  ++   G  P  +T++ LI   SK G 
Sbjct: 557 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 616

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A   +  M   G TP  + Y  L+       D  +   +   M   G   D      
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 676

Query: 461 LIHGLC 466
           ++  LC
Sbjct: 677 ILTCLC 682


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 232/512 (45%), Gaps = 69/512 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y  +ID   K+  +D+A    H+M+D GV P + TFNS++  + K+  F++        +
Sbjct: 13  YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72

Query: 166 ENRCKVEL---------------------------------DVYSFGILIKGCCEAGDLN 192
           E  C+                                    DV ++ IL  G C+ G ++
Sbjct: 73  ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRID 132

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +AFE++ ++   G +PN+V Y +LIDG CK    E+A  L   +   G V    TYT+++
Sbjct: 133 EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G      +  E M   G +PS+ TY  L+   C  G+V E   +F EM  ++  
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 252

Query: 313 CNVVTY--------------------------------NTLICGLCKEMRVQEAERLLDQ 340
            + + Y                                N L+ G CKE R+ E   + + 
Sbjct: 253 ADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFED 312

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  PN+ TYN ++DG C  G+ D+AF     + S G  P VV+YN++I    KA  
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            K A  ++ +M + GI P  VTY  L+  F + +  + A  +   M K+G  PD  TY  
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           LI GL     + +A +L + M       +    YN +I   CKEG   +AL L+  M   
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           G+  N  +Y+  I  LC++G+  EA  LL++M
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 196/400 (49%), Gaps = 38/400 (9%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N  KV  DV+++ ILI G C+A   +KA E+L+++ + G +P+ V + S++DG CK G  
Sbjct: 2   NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 61

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERA  L   + E                                       PS  TYN L
Sbjct: 62  ERAHSLLAVMAE-----------------------------------RNCRPSCCTYNTL 86

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C +  V     L DE        +VVTY+ L  GLCK  R+ EA  L+ +M   G 
Sbjct: 87  ISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGC 146

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN++TYN LIDG C A +T+KA+ L   L S+G  P VVTY +++    K G    A  
Sbjct: 147 TPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 206

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +V  M +RG TPS +TYT L++   R+  +++A  ++  M     + D   Y  L++G C
Sbjct: 207 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 266

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                KEA K+ + +  T   P   VYN ++ GYCKEG       +  +M  +G VPNI 
Sbjct: 267 KSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 323

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  +  LC+ GK  EA   L  M   G  P V  YNI+
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 231/538 (42%), Gaps = 73/538 (13%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           SS  V     Y  + D   K    D+A     +M  +G  P   T+N+L+  + K+   +
Sbjct: 108 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167

Query: 159 KGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K + L  +        DV ++ I++ G C+ G L+KA +++  + + G +P+V+ YT+L+
Sbjct: 168 KAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK--------------- 262
           +G C+ G ++ A  +F+++      A    Y  L+ G  K+   K               
Sbjct: 228 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI 287

Query: 263 -------DGF----------EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                  DG+            +E M   G  P++ TYN ++   C  GKV E F   + 
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M       +VV+YN +I GL K  + +EA ++LDQM  AGI P+ +TYN L+  FC    
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE-VTYT 424
            D A  +   +   G  P  VTYN LI   S+      A +L+ EM   G   S   TY 
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            +ID   +   +++A  +   M   G   +  TY + I  LC +G + EAS L + M   
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRA----------------------------------- 509
           +   ++V Y  +I G CK     RA                                   
Sbjct: 528 R---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584

Query: 510 -LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L LL  M ++G  P++ +Y+  I  LC+  K  +A  L ++M   G+  S   Y +L
Sbjct: 585 ALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 200/415 (48%), Gaps = 6/415 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SE 166
           +Y +++D + K    D+    F  M   G  P   T+N ++  + K    D+ + F  S 
Sbjct: 289 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +      DV S+ I+I G  +A    +A +VL+Q+ + G  P+ V Y +L+   CK    
Sbjct: 349 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNC 285
           + A  + + + + G+     TY  LI GL +     D +E   +M  NG V  +  TYN 
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I   C EG + +   L D M    V  N VTYN  I  LCKE R+ EA  LL +M    
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL- 527

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-NGQSPSVVTYNVLIRAFSKAGNSKMA 404
              + ++Y  +I G C A + D+A +L  ++ +  G   +  T+N+LI AF+K      A
Sbjct: 528 --RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 585

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L+  M +RG +PS +TY ++I    + D ++KA+E++  M   G      +Y VLI+G
Sbjct: 586 LTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           LC +G  KEA ++   M  +  E +D+    +      +G    A  LL  M  K
Sbjct: 646 LCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 213/491 (43%), Gaps = 44/491 (8%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           SS  V     Y  I+D   K    D+AL     ML  G  P   T+ +L+  + ++   D
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +    F E   K    D  ++  L+ G C++    +A +V++ +     +P + +Y +L+
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALM 294

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK G ++    +F  +   G V    TY +++ GL K+G   + F F E M   G  
Sbjct: 295 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV 354

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P + +YN +I       K  E  ++ D+M    +  + VTYNTL+   CKE R  +A  +
Sbjct: 355 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 414

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV-VTYNVLIRAFS 396
           L  M  AG+ P+ +TYN LI G         A+ L +++  NG   S   TYN +I    
Sbjct: 415 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 474

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G  K A  L+  M   G+  + VTY I ID   +   +++A    SL+ +     D  
Sbjct: 475 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA---SSLLSEMDTLRDEV 531

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETK------------------------------- 485
           +Y  +I GLC    +  ASKL   M   K                               
Sbjct: 532 SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLEL 591

Query: 486 -----LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                  P+ + YNM+I   CK     +A  L  EM  +G+V +  SY+  I  LC  G+
Sbjct: 592 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 651

Query: 541 WPEAEVLLNQM 551
             EA  +L +M
Sbjct: 652 GKEALQVLEEM 662



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 7/270 (2%)

Query: 119 SRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           +RL D A    H+ML +G V     T+N+++  + K     +  L         VE +  
Sbjct: 441 NRLGD-AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 499

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK- 235
           ++ I I   C+ G L++A  +L++++ +    + V YT++I G CK   ++RA  L R+ 
Sbjct: 500 TYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREM 556

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   GL  T HT+ +LI    K     +     E M   G SPS+ TYN +I   C   K
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V + ++LFDEM  R +  + V+Y  LI GLC + R +EA ++L++M  +    + +   K
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           L       G  ++A  L  ++ +   S S+
Sbjct: 677 LYLALRGQGRGEEAAELLRRMTTKMDSLSL 706


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 220/388 (56%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++L + ++ +L+   C++G +++A  +L+++E +G  P+++ Y+ LI G CK G +E A 
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L+ ++    +       + +I GLF+ G   +   +++ +  + V+  +  YN +I  Y
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G + E  + + ++  + ++  +VT+N+LI G CK+ ++ EA +LLD +K+ G+ P  
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  L++G+C+ G+    F + +++++    P+ +TY V+++   K G    +  L++ 
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 645

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  RG+ P ++TY  +I SF ++ D++KAF++++ M +    P   TY VLI+GLC+ GN
Sbjct: 646 MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 705

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +K+A +L  ++ +  +    V Y  +I  +C +G+   AL    +M E+G   +I  YS+
Sbjct: 706 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 765

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            I  LC+     +A+     ML  G+ P
Sbjct: 766 VINRLCKRNLITDAKFFFCMMLTHGIPP 793



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 229/443 (51%), Gaps = 1/443 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++AL + + M + GV P   T+N L             W          +  D+ ++ IL
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G++ ++F++  ++   G   ++V YT L+   CK+G I+ A +L  ++  +GL
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY+VLI GL K G  ++  E YE+M    + P+ +  + +I     +G +SE   
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            FD +   +VA  ++ YN +I G  K   + EA R   Q+   GISP ++T+N LI GFC
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A +L + +K +G  P+ VTY  L+  + + G+     D++ EME + I P+++
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT+++    +   + ++ ++   M   G  PD  TY  +I   C   ++++A +L N M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  L+P+ V YN++I G C  GN   A RLL  + ++ +     +Y++ I   C  G  
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741

Query: 542 PEAEVLLNQMLKLGLKPSVSLYN 564
             A V  +QM++ G + S+  Y+
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYS 764



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%), Gaps = 3/449 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGI 180
           D A  +F  M+  G+ P   ++N LL  +  + S ++   F +  EN   VE D+ ++ I
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH-GVEPDIVTYNI 345

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L  G    G ++ A++V+ ++   G +P++V YT LI G C+ G+IE +  L  K+   G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L  +  TYTVL+  L K+G   +      +M++ G+ P L TY+ LIH  C  G V E  
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L++EM  + +  N    + +I GL ++  + EA+   D +  + ++  +I YN +IDG+
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G   +A R + Q+   G SP++VT+N LI  F K G    A  L+  ++  G+ P+ 
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYT L++ +    DM   F+M   M+     P   TY V++ GLC +G + E+ +L   
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 645

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M+   L P+ + YN +I  +CK  +  +A +L  +M +  L P+  +Y+  I  LC  G 
Sbjct: 646 MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 705

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +A+ LL  +    ++ +   Y  + +A
Sbjct: 706 LKDADRLLVTLQDQSIRLTKVAYTTIIKA 734



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 242/498 (48%), Gaps = 39/498 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +++ +  A+ ++ +   ALF   +M    ++    T+NSLL  +  +   D  W  ++E 
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHT---DIMWDVYNEI 226

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   V  + Y+  ILI G C    L  A   L +     F P+VV + +L+ G CK G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + AK  F  + + GL+   ++Y +L+ GL   G  ++  EF   M+ +GV P + TYN L
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            + +   G +S  +K+   M    +  ++VTY  LICG C+   ++E+ +L ++M   G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +++TY  L+   C +G  D+A  L ++++  G  P ++TY+VLI    K G  + A +
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466

Query: 407 LVREMEERGITPSE-----------------------------------VTYTILIDSFV 431
           L  EM  + I P+                                    + Y I+ID + 
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  ++ +A   Y  + + G SP + T+  LI+G C KG + EA KL +++    L P  V
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 586

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y  ++ GYC+EG+ +    +L EM  K + P   +Y+  +  LC++G+  E+  LL  M
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 646

Query: 552 LKLGLKPSVSLYNILYRA 569
              GL P    YN + ++
Sbjct: 647 YARGLFPDQITYNTVIQS 664



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 210/417 (50%), Gaps = 3/417 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ +  KS   D+A+   H+M   G++P   T++ L+  + K  + ++    + E  
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEE-M 471

Query: 169 CKVELDVYSF--GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           C   +   SF    +I G  E G +++A    + + +   +  +++Y  +IDG  K G+I
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   +++I E G+  T  T+  LI G  K G   +  +  + ++++G+ P+  TY  L
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTL 591

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++ YC EG +   F +  EM  + +    +TY  ++ GLCKE R+ E+ +LL  M   G+
Sbjct: 592 MNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 651

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ ITYN +I  FC A +  KAF+L NQ+  +   PS VTYNVLI      GN K A  
Sbjct: 652 FPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADR 711

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  ++++ I  ++V YT +I +     D++ A   +  M + GF   +  Y  +I+ LC
Sbjct: 712 LLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC 771

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            +  + +A   F  M    + P+  +  +M+  + + G+      +   M + GL+P
Sbjct: 772 KRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 32/290 (11%)

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK------------- 355
           R+   N V ++ L C   +   V +A  +L +MK+  +  ++ TYN              
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD 221

Query: 356 -------------------LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
                              LIDG C       A     +       PSVV++N L+  F 
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G+  +A      M + G+ P   +Y IL+     +  ME+A E  + M+  G  PD+ 
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +L +G  + G +  A K+   M    L P+ V Y ++I G+C+ GN   + +L  +M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +GL  +I +Y+  +  LC+ G+  EA +LL++M  +GLKP +  Y++L
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVL 451


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 198/375 (52%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++E  G  PNVV Y ++IDG CK    + A    R +G  GL     T+ ++I GL ++G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             K+  E   +M   G  P   TYN L++ YC EG   +   L  EM    ++ NVVTY 
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           +LI  +CK   +  A    DQM + G+ PN  TY  +I+GF   G  D+A+R+ N++  +
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  PS+VTYN LI      G  + A  L+++M  +G+ P  V+Y+ +I  F R+ ++++A
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F+M   M      PD  TY  LI GLC +  + EA  +F  M   KL P++  Y  +I  
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YCKEG+  +AL L  EM +KG +P+  +Y+  I  L +  +  EA  LL ++      PS
Sbjct: 308 YCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPS 367

Query: 560 VSLYNILYRAKNNIE 574
              YN L     NIE
Sbjct: 368 AVTYNTLIENCCNIE 382



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 233/480 (48%), Gaps = 51/480 (10%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
            L +F +M  +G  P   T+N+++    K    D+ + F      K +E ++ +F ++I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C  G L +  EVL ++   G+ P+ V Y +L++G CK G+  +A +L  ++   GL  
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TYT LI  + K G      EF+++M + G+ P+  TY  +I+ +  +G + E +++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +EM       ++VTYN LI G C   R++EA  LL  M   G+ P+V++Y+ +I GF   
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            E D+AF++  ++      P  VTY+ LI+   +      A D+ +EM    + P E TY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL------------------ 465
           T LI+++ +  D+ KA  ++  M + GF PD  TY VLI+GL                  
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 466 --------------------------------CMKGNMKEASKLFNSMWETKLEPNDVVY 493
                                           CMKG M EA ++F SM     +PN+ +Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G+C+ GN  +A +L  EM     VP+  +  + +  L  +G   E   ++  +L+
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILR 481



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 171/306 (55%)

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
           G  F+++M+ NG  P++ TYN +I  YC   +  E F     M  + +  N++T+N +I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLC++ R++E   +L +M   G  P+ +TYN L++G+C  G   +A  L  ++  NG SP
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI +  KAGN   A +   +M  RG+ P+E TYT +I+ F +   +++A+ + 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M +SGF P + TY  LI+G C+ G M+EA  L   M    + P+ V Y+ +I G+ + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               RA ++  EM  K ++P+  +YSS I  LC+  +  EA  +  +ML + L P    Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 564 NILYRA 569
             L  A
Sbjct: 302 TTLINA 307



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 224/511 (43%), Gaps = 86/511 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSEN 167
           Y ++ID + K + +D+A  +   M   G+ P   TFN ++  + +     +   +    +
Sbjct: 21  YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMS 80

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R     D  ++  L+ G C+ G+ ++A  +  ++   G SPNVV YTSLI+  CK G++ 
Sbjct: 81  RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA   F ++   GL   + TYT +I G  + GL  + +    +M  +G  PS+ TYN LI
Sbjct: 141 RAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI 200

Query: 288 HEYCNEGKVSEGFKLFDEM--------------------RHRE---------------VA 312
           + +C  G++ E   L  +M                    R++E               V 
Sbjct: 201 NGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVL 260

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTY++LI GLC++ R+ EA  +  +M    + P+  TY  LI+ +C  G+ +KA  L
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS--- 429
            +++   G  P  VTYNVLI   +K   SK A  L+ ++      PS VTY  LI++   
Sbjct: 321 HDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN 380

Query: 430 ------------FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                       F     M++A +++  M      P+   Y V+IHG C  GN+ +A KL
Sbjct: 381 IEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKL 440

Query: 478 FNSMWETKLEPNDVVYNMM-------------------IFGYCK---------------- 502
           +  M      P+ V    +                   I   CK                
Sbjct: 441 YKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQK 500

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           EGN      LL EM + GL+P+  + ++ I 
Sbjct: 501 EGNMDMVFNLLTEMAKDGLIPSTGTPTNAIA 531


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 243/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL--------------------- 147
           Y ++ID   K+++ D+A   F QM+D GV+P + T+N L                     
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258

Query: 148 --------------LIFVIKSCSFDKGWLFF-SENRCKVELDVYSFGILIKGCCEAGDLN 192
                         L ++ K+    +  LFF S  R  ++ DV  + IL+ G    G L+
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +    L+ +   G SPN  I+  +     K   IE A  +F K+ + GL     ++  LI
Sbjct: 319 EMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P+++ ++ L++  C  GK  +  +LF E+  + + 
Sbjct: 379 DALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGIC 438

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + V +NTL+C LC E RV EA+RL+D M   G+ PNVI+YN L+ G C  G  D+A +L
Sbjct: 439 VDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + SNG  P+  TY +L+R + KA     A  L REM  +G+TP   TY  ++    +
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  S    D+YTY ++++GLC    + EA K+F  +     + + V 
Sbjct: 559 TGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVT 618

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI    K G    A+ L   ++  GLVP++ +Y      L ++G   E + L + M 
Sbjct: 619 FNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAME 678

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 679 KSGTAPNSHMLNALVR 694



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 37/436 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  +I G    G + KA+ +  ++ + G  PNVV YT++IDG CK   ++RAK +F
Sbjct: 160 DVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVF 219

Query: 234 RKIGELGLVATQHTYTVLICG-----------------------------------LFKN 258
           +++ + G+     TY  LI G                                   L KN
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  ++   F++ M   G+ P +  Y  L+H Y  +G +SE     D M    V+ N   +
Sbjct: 280 GRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIF 339

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N + C   K+  ++EA  + ++M+  G+SP+V+++  LID  C  G  D A   FNQ+ +
Sbjct: 340 NIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMIN 399

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P++  ++ L+      G  + A +L  E+ ++GI    V +  L+ +      + +
Sbjct: 400 EGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVME 459

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  +  LM + G  P+V +Y  L+ G C+ G + EA+KL + M    L+PN+  Y +++ 
Sbjct: 460 AQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLR 519

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      A  L  EM  KG+ P +A+Y++ +  L Q G++ EA  L   M+    K 
Sbjct: 520 GYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKC 579

Query: 559 SVSLYNILYRA--KNN 572
            +  YNI+     KNN
Sbjct: 580 DIYTYNIILNGLCKNN 595



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 234/456 (51%), Gaps = 5/456 (1%)

Query: 119 SRLSDQALFYFHQM---LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELD 174
           S  S++ +  F +M     S V P + T++ L+    +    + G+  F    +    ++
Sbjct: 65  SSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVN 124

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLN-QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           V     L+KG C+A  +++A ++L  ++ E G  P+VV Y ++I+G  + G +E+A  LF
Sbjct: 125 VIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLF 184

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G+     TYT +I GL K  +       +++M   GV P   TYNCLIH Y + 
Sbjct: 185 LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLST 244

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK  E  ++ +EM    +  + +TY  L+  LCK  R +EA    D M   GI P+V  Y
Sbjct: 245 GKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIY 304

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G+   G   +     + +  NG SP+   +N++  A++K    + A  +  +M +
Sbjct: 305 AILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G++P  V++  LID+  +   ++ A   ++ M   G +P+++ +  L++GLC  G  ++
Sbjct: 365 QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +LF  + +  +  + V +N ++   C EG    A RL+  M   G+ PN+ SY++ + 
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVA 484

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C  G+  EA  LL+ M+  GLKP+   Y IL R 
Sbjct: 485 GHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRG 520



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 203/428 (47%), Gaps = 5/428 (1%)

Query: 125 ALFYFHQMLD----SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           AL   H  LD    +GV P    FN +     K    ++    F++ R + +  DV SFG
Sbjct: 316 ALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFG 375

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            LI   C+ G ++ A    NQ+   G +PN+ +++SL+ G C  G  E+A+ LF ++ + 
Sbjct: 376 ALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ 435

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+      +  L+C L   G   +     + M   GV P++ +YN L+  +C  G++ E 
Sbjct: 436 GICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M    +  N  TY  L+ G CK  RV +A  L  +M M G++P V TYN ++ G
Sbjct: 496 AKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
               G   +A  L+  + ++     + TYN+++    K      A  + R +  +     
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VT+ I+I + ++    E A ++++ +   G  PDV TY ++   L  +G++ E   LF+
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           +M ++   PN  + N ++      G+  RA   L +++EK      ++ S  I +  +  
Sbjct: 676 AMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGE 735

Query: 540 KWPEAEVL 547
             P A+ L
Sbjct: 736 YQPHAKSL 743



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 229/503 (45%), Gaps = 40/503 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I+   +    ++A   F +M+D G+ P   T+ +++  + K+   D+    F +  
Sbjct: 164 YNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMI 223

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R  V+ D  ++  LI G    G   +  ++L ++   G  P+ + Y  L+D  CKNG  
Sbjct: 224 DR-GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRC 282

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A++ F  +   G+      Y +L+ G    G   +   F + M  NGVSP+   +N +
Sbjct: 283 REARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIM 342

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
              Y  +  + E   +F++MR + ++ +VV++  LI  LCK  RV +A    +QM   G+
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN+  ++ L+ G C  G+ +KA  LF ++   G     V +N L+      G    A  
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL----- 461
           L+  M   G+ P+ ++Y  L+     +  +++A ++  +M  +G  P+ +TY +L     
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522

Query: 462 ------------------------------IHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
                                         +HGL   G   EA++L+ +M  ++ + +  
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN+++ G CK      A ++   +  K    +  +++  IG L + G+  +A  L   +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 552 LKLGLKPSVSLYNILYRAKNNIE 574
              GL P V  Y ++  A+N IE
Sbjct: 643 SAYGLVPDVVTYRLI--AENLIE 663



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 7/278 (2%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMA-----GISPN 349
           + E  KLFDE+ H     +V  +N L+  + +      +ER++    +MA      ++PN
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD-LV 408
             TY+ LI  FC  G  +  F  F  +   G   +V+  + L++    A     A+D L+
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M E G  P  V Y  +I+ F R   +EKA+ ++  M   G  P+V TY  +I GLC  
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             +  A  +F  M +  ++P++  YN +I GY   G     +++L EM+  GL P+  +Y
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  LC++G+  EA +  + M + G+KP V++Y IL
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAIL 307


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 226/470 (48%), Gaps = 46/470 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  IID   K R  D+A   F +M   G+ P                             
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMP----------------------------- 491

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DV S+  LI G C +G   KA  + N++ ++G  P+V   + LID  CK G +  
Sbjct: 492 -----DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIE 546

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L   + + G +    T T L+ GL          + + KMQ  G  P++ T   L+ 
Sbjct: 547 ANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMK 606

Query: 289 EYCNEGKVSEGFKLFDEMRHRE----VAC--NVVTYNTLICGLCKEMRVQEAERLLDQMK 342
             C  G +    +L   M        + C  N ++Y+ +I GLCK  R  EA  L  +MK
Sbjct: 607 GLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK 666

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P+VI+Y  LI GFC +G+   A  LFN++   G  P V T++VLI    K G   
Sbjct: 667 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 726

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A++L+  M +RG  P+ VTYT L+     +D + +A +++  MQK G  PDV TYG L+
Sbjct: 727 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 786

Query: 463 HGLCMKGNMKEASKLFNSM------WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            GLC  GN+K A +L   M      + T  +P+ + Y+++I G CK G    A  L  EM
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              G++PN+ SY+S I   C+ GK  +A+ L N+M+  G++ +   Y+++
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 896



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 235/486 (48%), Gaps = 63/486 (12%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           VT S L + +   H   R+S +A + F  M   G RP + T+ +L+  + ++ + +    
Sbjct: 90  VTYSTLIKGLCMEH---RIS-EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQ 145

Query: 163 FFSEN---------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              E          +CK  L   S+ I+I G C+    ++A E+  +++  G  P+V+ Y
Sbjct: 146 LHQEMLNDTGRYGIKCKPTL--ISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISY 203

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           TSLI G C +G  E+AK LF ++ ++G                                 
Sbjct: 204 TSLIHGFCHSGKWEKAKCLFNEMLDVG--------------------------------- 230

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             + P + T   LI  +C EGKV E  +L + M HR    ++VTY+TLI GLC + R+ E
Sbjct: 231 --IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-------PSVV 386
           A +L   MK  G  P+ I Y  L+ G C  G+ + A  L  ++ ++          P V 
Sbjct: 289 ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVT 348

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T ++LI    K G    A++L+  M +RG     VTY+ LI        + +A  ++  M
Sbjct: 349 TSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 408

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM------WETKLEPNDVVYNMMIFGY 500
           QK G  PD  TYG L+ GLC  GN+  A +L   M      +  K +P  + Y+++I G 
Sbjct: 409 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 468

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK+     A  L  EM  +G++P++ SY++ I   C  GKW +A+ L N+ML +G++P V
Sbjct: 469 CKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528

Query: 561 SLYNIL 566
           +  ++L
Sbjct: 529 TTSSVL 534



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 222/409 (54%), Gaps = 12/409 (2%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD+ ++  LIKG C    +++A  +   ++++G  P+ + Y +L+ G C+ G+I  A  L
Sbjct: 380 LDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQL 439

Query: 233 FRKI----GELGLVA--TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +++    G  G+    T  +Y+++I GL K+  + +  E +E+M+  G+ P + +Y  L
Sbjct: 440 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTL 499

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +C  GK  +   LF+EM    +  +V T + LI  LCK+ +V EA +LL+ +   G 
Sbjct: 500 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 559

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +V+T   L+ G C      KA +LF +++  G  P+VVT   L++   ++GN K+A +
Sbjct: 560 ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 619

Query: 407 LVREM----EERGIT--PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           L + M       GI   P+ ++Y+I+ID   +    ++A E++  M+  G  PDV +Y  
Sbjct: 620 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LIHG C  G  K+A  LFN M +  ++P+   ++++I   CKEG    A  LL  M ++G
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +PN  +Y++ +  LC + +  EA  L  +M KLG  P V  Y  L + 
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 788



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 225/420 (53%), Gaps = 23/420 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I     S   ++A   F++MLD G++P   T + L+  + K     KG +  +   
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK-----KGKVIEANKL 550

Query: 169 CKVE------LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +V       LDV +   L+KG C    ++KA ++  +++++G  PNVV   +L+ G C+
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610

Query: 223 NGDIERA----KMLFRKIGELGLVATQH--TYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +G+I+ A    K +       G+    +  +Y+++I GL K G + +  E +++M+  GV
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + +Y  LIH +C  GK  +   LF+EM    V  +V T++ LI  LCKE +V EA  
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL+ M   G  PN +TY  L+ G C      +A +LF +++  G  P VVTY  L++   
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790

Query: 397 KAGNSKMASDLVREM-EERG-----ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           + GN K A +L ++M  + G       P  ++Y+I+ID   +    ++A E++  M+  G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P+V +Y  LIHG C  G +++A  LFN M +  ++ N V Y++MI G+CKEG   +AL
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 195/418 (46%), Gaps = 22/418 (5%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT---------SLIDGCCKNG 224
           D ++F ILI   C    +N+    +  +   G+ P++V Y+          LID  CK G
Sbjct: 9   DSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEG 68

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  A  L   + + G +    TY+ LI GL       +    +  MQ  G  P   TY 
Sbjct: 69  KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 128

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHRE----VAC--NVVTYNTLICGLCKEMRVQEAERLL 338
            L+   C  G ++   +L  EM +      + C   +++Y+ +I GLCK+ R  EA  L 
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +MK  G+ P+VI+Y  LI GFC +G+ +KA  LFN++   G  P V T  VLI  F K 
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A++L+  M  RG     VTY+ LI        + +A +++  M+K G  PD   Y
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 308

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETK-------LEPNDVVYNMMIFGYCKEGNSYRALR 511
           G L+ GLC  G +  A  L   M           + P+    +M+I   CKEG    A  
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LL  M ++G + +I +YS+ I  LC + +  EA  L   M KLG +P    Y  L + 
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 426



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 15/314 (4%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT---------L 321
           M+L G+ P  +T+N LI+  CN  +V+EG      +  R    ++VTY+          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I  LCKE +V EA  LL+ M   G   +++TY+ LI G C      +A  LF  ++  G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREM----EERGI--TPSEVTYTILIDSFVRSDD 435
            P  +TY  L++   + GN  +A  L +EM       GI   P+ ++Y+I+ID   +   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            ++A E++  M+  G  PDV +Y  LIHG C  G  ++A  LFN M +  ++P+     +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  +CKEG    A  LL  M  +G + +I +YS+ I  LC   +  EA  L   M KLG
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 556 LKPSVSLYNILYRA 569
            +P    Y  L + 
Sbjct: 301 CRPDAIAYGTLMKG 314



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 9/295 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L+   P   N    +  Y  IID   K    D+A   F +M   GV P   ++ SL+   
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684

Query: 152 IKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +S  + D  +LF       V+ DV +F +LI   C+ G + +A E+L  + + G  PN 
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V YT+L+ G C N  I  A  LF K+ +LG +    TY  L+ GL + G  K   E ++K
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804

Query: 271 MQLN------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           M  +         P + +Y+ +I   C  G+  E  +LF EM+   V  NV++Y +LI G
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 864

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            C+  ++++A+ L ++M   G+  N +TY+ +I GFC  G+ DKA  LF ++++N
Sbjct: 865 FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 263/545 (48%), Gaps = 45/545 (8%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A   F WA  Q G +HT +S  II+ L+  ++M + +H   + +I+        +S 
Sbjct: 84  PKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIM--------NSR 135

Query: 83  FTPRSLLCHLTQLFPSSSNP-VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
                 +C++  +  S+ N  V+ S +++ +    ++  L ++A   F +M +    P++
Sbjct: 136 MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKA 195

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            + N LL  + KS +                                G L + F   N +
Sbjct: 196 RSCNFLLHRLSKSGN--------------------------------GQLVRKF--FNDM 221

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G +P+V  Y  +ID  CK GD+E ++ LF ++ E+GL     TY  LI G  K G  
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++    + +M+  G  P + TYN LI+ YC   K+   F+ F EM++  +  NVVTY+TL
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   CKE  +Q A +LL  M+  G+ PN  TY  LID  C AG   +A++L N +   G 
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
             ++VTY  L+    KAG    A ++ R M + GI+P++  YT L+  +++++ ME A +
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M +    PD+  YG +I G C +  ++E   +   M    +  N V+   +I  Y 
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G S  AL    EM + G+   I +Y   I  LC+ G    A     +ML LGL+P+V+
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581

Query: 562 LYNIL 566
           +Y  L
Sbjct: 582 VYTSL 586



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 225/461 (48%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K    + +   F QM + G+ P   T+NSL+    K  S ++    F+E +
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D+ ++  LI   C+   + +AFE  ++++  G  PNVV Y++LID  CK G ++
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 352

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +   GL+  + TYT LI    K G   + ++    M   GV  ++ TY  L+
Sbjct: 353 GAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALL 412

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G++ E  ++F  M    ++ N   Y  L+ G  K  R+++A ++L QM    I 
Sbjct: 413 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 472

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++I Y  +I G C   + ++   +  ++KS G S + V    +I A+ KAG S  A + 
Sbjct: 473 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 532

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM++ G+  + VTY +LID    +  +E A + +  M   G  P+V  Y  LI GLC 
Sbjct: 533 FQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCX 592

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              ++ A KLF+ M    + P+   +  +I G  K GN   AL L+  M E  +  ++  
Sbjct: 593 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 652

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y+S +    Q G+  +A    N+M++ G+ P   L   L R
Sbjct: 653 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 204/409 (49%), Gaps = 1/409 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +I+ + K     +A  YF +M ++G++P   T+++L+    K         L     
Sbjct: 303 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR 362

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  + +++  LI   C+AG+L +A+++LN + + G   N+V YT+L+DG CK G + 
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +FR + + G+   Q  YT L+ G  K    +D  +  ++M    + P L  Y  +I
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C++ K+ E   + +EM+ R ++ N V   T+I    K  +  +A     +M+  G+ 
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 542

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             ++TY  LIDG C+AG  + A   F ++ S G  P+V  Y  LI         + A  L
Sbjct: 543 ATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKL 602

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM+ RG+TP    +T LID  ++  ++++A  + S M +     D++ Y  L+ G   
Sbjct: 603 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 662

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            G + +A K FN M E  + P +V+   ++  Y K G    A+ L  EM
Sbjct: 663 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 170/380 (44%), Gaps = 36/380 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++IDA  K  +   A+     M  +G+ P   T+ SL+    K+ +  + W   ++  
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEV------------------------------ 197
           +  V+L++ ++  L+ G C+AG + +A EV                              
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457

Query: 198 -----LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                L Q+ E    P++++Y S+I G C    +E  K++  ++   G+ A     T +I
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
              FK G   D   F+++MQ  GV  ++ TY  LI   C  G V      F  M    + 
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV  Y +LI GLC    ++ A++L D+M+  G++P++  +  LIDG    G   +A  L
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 637

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            +++        +  Y  L+  FS+ G    A     EM E+GI P EV    L+  + +
Sbjct: 638 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 697

Query: 433 SDDMEKAFEMYSLMQKSGFS 452
              +++A E+ + M++  +S
Sbjct: 698 RGQLDEAIELKNEMERMAYS 717



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 110/218 (50%)

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            ++ L   F + G  ++A   F+++++    P   + N L+   SK+GN ++      +M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              GI PS  TY ++ID   +  D+E +  ++  M++ G SPDV TY  LI G    G++
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           +E + LFN M +    P+ + YN +I  YCK     RA     EM   GL PN+ +YS+ 
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I   C++G    A  LL  M + GL P+   Y  L  A
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDA 379


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 264/548 (48%), Gaps = 12/548 (2%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           +L P      F W SR  L  +  +      L +S  ++  +  A  L+ ++I      +
Sbjct: 96  RLHPKLLLDFFYW-SRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIR-----A 149

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS-RLSDQALFYFHQMLDSGVRPR 140
             TP  +L  + +   S S+   +  + + ++D + K+ R+ D A      M D G+ P 
Sbjct: 150 YPTPPLVLSSVHRAL-SGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVL-LMKDLGLAPS 207

Query: 141 SNTFNSLLIFVIKSCSFDKGWLF--FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
               N LL  ++++ + D  W    F E    +  DVY++  LI+  C+  DL  A +V+
Sbjct: 208 LRCCNGLLKDLLRADALDLLWKVRGFMEG-AGISPDVYTYSTLIEAYCKVRDLESAKKVV 266

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            ++ E G S NVV Y +LI G C+ G IE A    +++ + GLV    TY  +I GL K 
Sbjct: 267 EEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKR 326

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G         ++M   G+ P++  Y+ LI  +  +G   E FK+  EM    V  N +TY
Sbjct: 327 GRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITY 386

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           + LI GLCK  R+  A R+L QM   G   + +TYN +I+G       ++AF L N+++ 
Sbjct: 387 DNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G SP+V TY+++I    + G S+ AS L+ +M   G+ P+   Y  LI  + R      
Sbjct: 447 GGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSL 506

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E    M +   +PD+Y Y  LI GL   G M EA + ++ M E   +PND  Y  +I 
Sbjct: 507 ACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIH 566

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY   GN  +A +LL +M   GL PN   Y+  +    +     +    L  ML+ GL P
Sbjct: 567 GYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMP 626

Query: 559 SVSLYNIL 566
              LY I+
Sbjct: 627 DNRLYGIV 634



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 236/459 (51%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    ++   ++A  Y  +M D G+ P   T+ +++  + K    D+      E  
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C  +  +V  +  LI G    G+ ++AF+++ ++   G  PN + Y +LI G CK G + 
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  + +++ ++G +A   TY ++I G  +   +++ F    +M+  G+SP++YTY+ +I
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G+      L ++M    +  N   Y  LI G C+E     A   L +M    ++
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++  YN LI G  + G+ D+A   ++++   G  P+  TY  LI  +S AGN + A  L
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M   G+ P++  Y  +++ + +SD++EK       M + G  PD   YG++IH L  
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G+M+ A  + + + +  L P+ ++Y  +I G+CK  +  +A+ LL EM +KG+ P I+ 
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I   C+      A  + N ++  GL P+   Y  L
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 218/449 (48%), Gaps = 1/449 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y ++ID  ++   +D+A     +M  +GV+P   T+++L+  + K     +      + 
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +     D  ++ ++I+G     +  +AF +LN++ + G SPNV  Y+ +I+G C+ G+ 
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGES 469

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERA  L  ++   GL      Y  LI G  + G      E  +KM    ++P LY YN L
Sbjct: 470 ERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSL 529

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I    N GK+ E  + +DEM  +    N  TY  LI G      +++AE+LL QM  +G+
Sbjct: 530 IIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL 589

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN   Y ++++G+  +   +K       +   G  P    Y ++I   S +G+ + A  
Sbjct: 590 NPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVS 649

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++  +E+ G+ P  + Y  LI  F ++ DMEKA  +   M K G  P +  Y  LI G C
Sbjct: 650 VLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFC 709

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
              ++  A  +FNS+    L PN V Y  +I GYCK G+   A+ L  EM  +G+ P+  
Sbjct: 710 KSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAF 769

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            YS         G   +A  +  +M+  G
Sbjct: 770 VYSVLAAGCSNSGDLQQALFITEEMIARG 798



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 201/402 (50%), Gaps = 38/402 (9%)

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V+   L+D   K G +     +   + +LGL  +      L+  L +       ++    
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC---- 326
           M+  G+SP +YTY+ LI  YC    +    K+ +EMR    + NVVTYNTLI GLC    
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 327 --------KEM-----------------------RVQEAERLLDQMKMAGISPNVITYNK 355
                   KEM                       R  +A+ LLD+M  AG+ PNV+ Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGF   G  D+AF++  ++ + G  P+ +TY+ LIR   K G    AS ++++M + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
                +TY ++I+  +R  + E+AF + + M+K G SP+VYTY ++I+GLC  G  + AS
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L   M    L+PN  VY  +I GYC+EG+   A   L +M  + L P++  Y+S I  L
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
              GK  EA    ++ML+ G +P+   Y  L   Y    N+E
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLE 575



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 192/412 (46%), Gaps = 2/412 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  II+   +   S++A     QM+  G++P +  +  L+    +  SF        +  
Sbjct: 456 YSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMT 515

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  D+Y +  LI G    G +++A E  +++ E GF PN   Y  LI G    G++E
Sbjct: 516 RENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLE 575

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A+ L  ++   GL      Y  ++ G FK+   +      + M   G+ P    Y  +I
Sbjct: 576 KAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVI 635

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H   + G +     +   +    +  + + Y +LI G CK   +++A  LLD+M   GI 
Sbjct: 636 HNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE 695

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P +  YN LIDGFC + +   A  +FN +   G  P+ VTY  LI  + KAG+ + A DL
Sbjct: 696 PGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDL 755

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM   G+ P    Y++L      S D+++A  +   M   G++  + ++  L+HG C 
Sbjct: 756 YNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCK 814

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +G ++E  K  + M +  + P+ +    ++ G  + G    A  +  E+ +K
Sbjct: 815 RGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 196/434 (45%), Gaps = 23/434 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  + +      A     +M    + P    +NSL+I +      D+   ++ E 
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  + + +++G LI G   AG+L KA ++L+Q+   G +PN  IY  +++G  K+ ++
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+     + + E GL+     Y ++I  L  +G  +        ++ NG+ P    Y  L
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSL 669

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C    + +   L DEM  + +   +  YN LI G CK   +  A  + + +   G+
Sbjct: 670 ISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGL 729

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +TY  LIDG+C AG+   A  L+N++ + G +P    Y+VL    S +G+ + A  
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALF 789

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  EM  RG      ++  L+  F +   +++  +   +M      P + T   ++ GL 
Sbjct: 790 ITEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLG 848

Query: 467 MKGNMKEA--------------------SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
             G + EA                    S LF  M    L P DV++NM I  +CK+G  
Sbjct: 849 EAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNM-IQSHCKQGYL 907

Query: 507 YRALRLLGEMNEKG 520
            +AL L   +  KG
Sbjct: 908 DKALMLHDALVAKG 921



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 20/360 (5%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+  S  NP     +Y  I++ + KS   ++       ML+ G+ P +  +  ++  +
Sbjct: 581 LHQMLNSGLNP--NDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
             S          S   +  +  D   +G LI G C+A D+ KA  +L+++ + G  P +
Sbjct: 639 SSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             Y +LIDG CK+ DI  A+ +F  I   GL     TYT LI G  K G  +D  + Y +
Sbjct: 699 SCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNE 758

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   GV+P  + Y+ L     N G + +   + +EM  R  A  + ++NTL+ G CK  +
Sbjct: 759 MLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGK 817

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +QE  + L  M    I P+++T   ++ G  +AG+  +A  +F +L+    S        
Sbjct: 818 LQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHR------ 871

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                    ++   S L  +M  +G+ P +V +  +I S  +   ++KA  ++  +   G
Sbjct: 872 ---------DTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKG 921


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 252/518 (48%), Gaps = 39/518 (7%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LLS +     A +   +L  +  R        RSLL  +++    ++ P   S  Y +++
Sbjct: 73  LLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVS--YTTVM 130

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
                SR + +A+     M  SGVR                                   
Sbjct: 131 RGLCASRRTGEAVALLRSMQASGVRA---------------------------------- 156

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++G LI+G C+A +L+ A E+L+++   G  PNVV+Y+ L+ G C++G  +    +F
Sbjct: 157 DVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVF 216

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G+      +T LI  L K G      +  + M   G+ P++ TYN LI+  C E
Sbjct: 217 EDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKE 276

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPNVI 351
           G V E   L  EM  + VA +VVTYNTLI GL   + + EA   L++M      + P+V+
Sbjct: 277 GSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVV 336

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T+N +I G C  G   +A ++   +   G   ++VTYN LI  F +    KMA +L+ E+
Sbjct: 337 TFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDEL 396

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G+ P   TY+ILI+ F +  ++++A +    M++ G   +++ Y  L+  +C +G M
Sbjct: 397 AISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMM 456

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           + A  LFN M +     + + Y+ MI G CK G+     +L+ +M ++GL P+  +YS  
Sbjct: 457 ERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSML 515

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I +  + G   EAE +L QM   G  P V++++ L + 
Sbjct: 516 INMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKG 553



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 252/527 (47%), Gaps = 32/527 (6%)

Query: 18  SRMAKLPPLKAFSLFNWA----SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQ------ 67
           S ++ LP ++    +N       R+G  H  Q+     R LL  MS  +H AA+      
Sbjct: 72  SLLSALPDVRDAVSYNTVLAALCRRGGDHLRQA-----RSLLVDMSREAHPAARPNAVSY 126

Query: 68  -TLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
            T++  + + R T  +      L    Q     ++ VT   L   + DA   S L D AL
Sbjct: 127 TTVMRGLCASRRTGEAVA----LLRSMQASGVRADVVTYGTLIRGLCDA---SEL-DAAL 178

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGC 185
               +M  SGV+P    ++ LL    +S  + D G +F   +R  ++ DV  F  LI   
Sbjct: 179 ELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDL 238

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G   KA +V + + + G  PNVV Y  LI+  CK G +  A  L +++ + G+    
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDV 298

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNG---VSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            TY  LI GL       +   F E+M + G   V P + T+N +IH  C  G++++  K+
Sbjct: 299 VTYNTLIAGLSGVLEMDEAMSFLEEM-IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            + M  R   CN+VTYN LI G  +  +V+ A  L+D++ ++G+ P+  TY+ LI+GF  
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             E D+A +    ++  G    +  Y  L+ A  + G  + A  L  EM+ +      + 
Sbjct: 418 MWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIA 476

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ +I    +S DM+   ++   M   G +PD  TY +LI+     G+++EA ++   M 
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV--PNIAS 527
            +   P+  V++ +I GY  EG + + L+L+ EM  K +   P I S
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 230/449 (51%), Gaps = 4/449 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           +++M D G++P   T N+L+  + ++       L   E +   V  D  +F  L++G  E
Sbjct: 183 YNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIE 242

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G +  A  V  ++ E G SP  V    LI+G CK G +E A    +K    G    Q T
Sbjct: 243 EGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVT 302

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y   +  L +NG      +  + M   G  P ++TYN +I+     G++ E   + ++M 
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 362

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R    +  T+NTLI  LC + R++EA  L  ++ + G+SP+V T+N LI+  C  G+  
Sbjct: 363 DRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 422

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
              RLF ++KS+G +P  VTYN+LI      G    A DL++EME  G   S VTY  +I
Sbjct: 423 LGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTII 482

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   +E+A E++  M   G S    T+  LI GLC    + +A++L   M +  L+
Sbjct: 483 DALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 542

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+++ YN ++  YCK+G+  +A  +L  M   G   ++ +Y + I  LC+ G+   A  L
Sbjct: 543 PSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 602

Query: 548 LNQMLKLGLKPSVSLYNILYRA---KNNI 573
           L  M   G++P+   YN + ++   +NN+
Sbjct: 603 LRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 268/566 (47%), Gaps = 53/566 (9%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMSSH 61
           LN+++  +++  L+  S++N  + +G+Q    +++ +++            L+L +MSSH
Sbjct: 167 LNVLAEGSRMKLLE--SVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH 224

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRL 121
           + A  +T    ++ G I   S    + L   T++  +  +P   +     +I+ + K   
Sbjct: 225 AVAPDETTFTTLMQGFIEEGSI--EAALRVKTKMMETGCSPTRVT--VNVLINGYCKMGR 280

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
            + AL Y  + +  G  P   T+N+                                   
Sbjct: 281 VEDALGYIQKEIADGFEPDQVTYNTF---------------------------------- 306

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+ G ++ A +V++ + + G  P+V  Y ++I+   KNG+++ AK +  ++ + G 
Sbjct: 307 VHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+  LI  L      ++  +   ++ + G+SP +YT+N LI+  C  G    G +
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF+EM+    A + VTYN LI  LC   ++  A  LL +M+  G   + +TYN +ID  C
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                ++A  +F+Q+ ++G S S VT+N LI    KA     A++L+ +M + G+ PS +
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  ++  + +  D++KA ++   M  +GF  DV TYG LI+GLC  G  + A KL   M
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-DGK 540
               + P    YN +I    +  N   AL L  EM E G  P+  +Y      LC+  G 
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP 666

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EA   L +M+  G  P  S + +L
Sbjct: 667 IKEAFDFLVEMVNKGFMPEFSSFRML 692



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 186/398 (46%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   V+ D   +  L+    E   +     V N++ + G  P+VV   +LI   C+   +
Sbjct: 152 NTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQV 211

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A ++  ++    +   + T+T L+ G  + G  +       KM   G SP+  T N L
Sbjct: 212 RTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVL 271

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC  G+V +      +        + VTYNT +  LC+   V  A +++D M   G 
Sbjct: 272 INGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH 331

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+V TYN +I+     GE D+A  + NQ+   G  P   T+N LI A       + A D
Sbjct: 332 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALD 391

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L RE+  +G++P   T+ ILI++  +  D      ++  M+ SG +PD  TY +LI  LC
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +  A  L   M       + V YN +I   CK+     A  +  +M+  G+  +  
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           ++++ I  LC+  +  +A  L+ QM+K GL+PS   YN
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYN 549



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 173/370 (46%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V NQL   G   +  +Y  L++   +   ++  + ++ ++ + G+     T   LI  L 
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +    +      E+M  + V+P   T+  L+  +  EG +    ++  +M     +   V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T N LI G CK  RV++A   + +    G  P+ +TYN  +   C  G    A ++ + +
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G  P V TYN +I   SK G    A  +V +M +RG  P   T+  LI +    + +
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           E+A ++   +   G SPDVYT+ +LI+ LC  G+     +LF  M  +   P++V YN++
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I   C  G    AL LL EM   G   +  +Y++ I  LC+  +  EAE + +QM   G+
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 557 KPSVSLYNIL 566
             S   +N L
Sbjct: 507 SRSAVTFNTL 516



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 102/285 (35%), Gaps = 72/285 (25%)

Query: 354 NKLIDGFCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           ++L+    +  + + A ++ N  L     +PS   Y  +I+    AG   +   LVREM 
Sbjct: 57  DRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEM------------------------------ 442
             G           ++S+ R    + A ++                              
Sbjct: 117 REGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRM 176

Query: 443 ------YSLMQKSGFSPDVYTYGVLIHGLC------------------------------ 466
                 Y+ M   G  PDV T   LI  LC                              
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236

Query: 467 MKGNMKEAS-----KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           M+G ++E S     ++   M ET   P  V  N++I GYCK G    AL  + +    G 
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P+  +Y++ +  LCQ+G    A  +++ ML+ G  P V  YN +
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 237/464 (51%), Gaps = 3/464 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K++   +A+    +M  +G  P S T  +L+  + K    D+        +
Sbjct: 36  YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + DV  +G LI G C  G+L++  E+ +++   G S NVV Y+ L+ G C+ G  +
Sbjct: 96  KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 155

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   + E G+     TYT LI GL K+G      +    M   G  PS  TYN L+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
              C EG V + FK+   M  +    +VVTYNTL+ GLC + +V EA +L + M      
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 275

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PNV T+N LI G C  G   KA ++  ++   G   ++VTYN+L+    KAG  K A 
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L +++ + G  P+  TY+ILID F +   +  A  ++  M+  G +P ++ Y  L+  L
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G++++A  LF  M     EP+ + +N MI G  K G+      L  +M E GL P+ 
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 455

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++S+ I  L + G+  EA+  L +M+  G  P   +Y+ L + 
Sbjct: 456 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 204/392 (52%), Gaps = 8/392 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMG---FSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           I++KG C  G +   FE +  + EMG    SP++V Y +LI+G CK   ++ A  L  ++
Sbjct: 3   IVLKGLCRNGGV---FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G      T T L+ GL K+G   +  E  E M+  G    +  Y  LI  +CN G +
Sbjct: 60  EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
             G +LFDEM  + ++ NVVTY+ L+ GLC+  + +EA  +L+ M   GI P+V+TY  L
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG C  G    A  L N +   G+ PS VTYNVL+    K G    A  ++R M E+G 
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLM--QKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               VTY  L+        +++A ++++ M   ++   P+V+T+ +LI GLC +G + +A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            K+   M +     N V YNM++ G  K G    A+ L  ++ + G VPN  +YS  I  
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            C+      A+ L  +M   GL P++  YN L
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 203/412 (49%), Gaps = 2/412 (0%)

Query: 157 FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           F+   L     R  V  D+ S+  LI G C+A  L +A  +L ++E  G  PN V  T+L
Sbjct: 15  FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTL 74

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           +DG CK+G ++ A  L   + + G  A    Y  LI G   NG    G E +++M   G+
Sbjct: 75  MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGI 134

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           S ++ TY+CL+H  C  G+  E   + + M    +  +VVTY  LI GLCK+ R   A  
Sbjct: 135 SANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMD 194

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL+ M   G  P+ +TYN L+ G C  G    AF++   +   G+   VVTYN L++   
Sbjct: 195 LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC 254

Query: 397 KAGNSKMASDLVREM--EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             G    A  L   M   E  + P+  T+ +LI    +   + KA +++  M K G   +
Sbjct: 255 DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGN 314

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + TY +L+ G    G +KEA +L+  + +    PN   Y+++I G+CK      A  L  
Sbjct: 315 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 374

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EM   GL P +  Y++ +  LC++G   +A+ L  +M     +P +  +N +
Sbjct: 375 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM 426



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 215/463 (46%), Gaps = 10/463 (2%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
           FP+S    T       ++D   K    D+A+     M   G       + +L+     + 
Sbjct: 65  FPNSVTCTT-------LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           + D+G   F E   K +  +V ++  L+ G C  G   +A  VLN + E G  P+VV YT
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            LIDG CK+G    A  L   + E G   +  TY VL+ GL K GL  D F+    M   
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQ 332
           G    + TYN L+   C++GKV E  KLF+ M   E  +  NV T+N LI GLCKE R+ 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A ++  +M   G   N++TYN L+ G   AG+  +A  L+ Q+   G  P+  TY++LI
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F K     +A  L  EM   G+ P+   Y  L+ S  +   +E+A  ++  M  +   
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD+ ++  +I G    G+ +   +L   M E  L P+ + ++ +I    K G    A   
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           L  M   G  P+   Y S +  L   G   E   LL+QM   G
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 152/285 (53%), Gaps = 2/285 (0%)

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++   C  G V E   L  EM  + V+ ++V+YNTLI GLCK  +++EA  LL +M+ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG  PN +T   L+DG C  G  D+A  L   +K  G    VV Y  LI  F   GN   
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             +L  EM  +GI+ + VTY+ L+    R    ++A  + + M + G  PDV TY  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC  G    A  L N M E   EP++V YN+++ G CKEG    A ++L  M EKG   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQML--KLGLKPSVSLYNIL 566
           ++ +Y++ +  LC  GK  EA  L N M   +  L+P+V  +N+L
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 137/251 (54%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N ++ GLC+   V EA  L+ +M    +SP++++YN LI+G C A +  +A  L  ++++
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P+ VT   L+    K G    A +L+  M+++G     V Y  LI  F  + ++++
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
             E++  M   G S +V TY  L+HGLC  G  KEA+ + N+M E  + P+ V Y  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK+G +  A+ LL  M EKG  P+  +Y+  +  LC++G   +A  +L  M++ G K 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 559 SVSLYNILYRA 569
            V  YN L + 
Sbjct: 242 DVVTYNTLMKG 252



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 169/366 (46%), Gaps = 13/366 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF--FSE 166
           Y  +ID   K   +  A+   + M++ G  P + T+N LL  + K     +G +   F  
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK-----EGLVIDAFKI 230

Query: 167 NRCKVE----LDVYSFGILIKGCCEAGDLNKAFEVLNQL--EEMGFSPNVVIYTSLIDGC 220
            R  +E     DV ++  L+KG C+ G +++A ++ N +   E    PNV  +  LI G 
Sbjct: 231 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 290

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G + +A  + RK+ + G      TY +L+ G  K G  K+  E ++++   G  P+ 
Sbjct: 291 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 350

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +TY+ LI  +C    ++    LF EMR   +   +  YNTL+  LCKE  +++A+ L  +
Sbjct: 351 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M  A   P++I++N +IDG   AG+      L  ++   G  P  +T++ LI   SK G 
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 470

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A   +  M   G TP  + Y  L+       D  +   +   M   G   D      
Sbjct: 471 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 530

Query: 461 LIHGLC 466
           ++  LC
Sbjct: 531 ILTCLC 536


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 202/393 (51%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +   LI+G C +G   KA  ++  LE  G  P+V+ Y  LI G CK+G+I++A  + 
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +   + +     TY  ++  L  +G  K+  E  ++       P + TY  LI   CN+
Sbjct: 201 ER---MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KL DEMR +    +VVTYN LI G+CKE R+ EA + L+ M + G  PNVIT+
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A RL   +   G SPSVVT+N+LI    +      A D++ +M +
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P+ ++Y  L+  F +   M++A E   +M   G  PD+ TY  L+  LC  G    
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G +  A  LL EM  KGL P+I +YS+ + 
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L  +GK  EA  + + M  L +KPS   YN +
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAI 530



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 218/422 (51%), Gaps = 2/422 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    +S  + +A      + +SG  P   T+N L+    KS   DK        R  
Sbjct: 147 SLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLE--RMS 204

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV ++  +++  C++G L +A EVL++  +    P+V+ YT LI+  C +  + +A 
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY VLI G+ K G   +  +F   M L G  P++ T+N ++   
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+  +  +L  +M  +  + +VVT+N LI  LC++  +  A  +L++M   G  PN 
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+ GFC   + D+A      + S G  P +VTYN L+ A  K G +  A +++ +
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G +P  +TY  +ID   +    E A E+   M++ G  PD+ TY  L+ GL  +G 
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA K+F+ M    ++P+ V YN ++ G CK   + RA+  L  M EKG  P  A+Y+ 
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 531 TI 532
            I
Sbjct: 565 LI 566



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 201/381 (52%), Gaps = 3/381 (0%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+L +  + L ++   G  P+V+  TSLI G C++G   +A  +   +   G V    TY
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            VLI G  K+G      +  E+M    V+P + TYN ++   C+ GK+ E  ++ D    
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQ 237

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           RE   +V+TY  LI   C +  V +A +LLD+M+  G  P+V+TYN LI+G C  G  D+
Sbjct: 238 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 297

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A +  N +   G  P+V+T+N+++R+    G    A  L+ +M  +G +PS VT+ ILI+
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R   + +A ++   M K G  P+  +Y  L+HG C +  M  A +    M      P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V YN ++   CK+G +  A+ +L +++ KG  P + +Y++ I  L + GK   A  LL
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
            +M + GLKP +  Y+ L R 
Sbjct: 478 EEMRRKGLKPDIITYSTLLRG 498



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 187/392 (47%), Gaps = 4/392 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +I  + KS   D+AL    +M    V P   T+N++L  +  S    +   +   + 
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQM 236

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +   DV ++ ILI+  C    + +A ++L+++ + G  P+VV Y  LI+G CK G ++
Sbjct: 237 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 296

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G      T+ +++  +   G   D       M   G SPS+ T+N LI
Sbjct: 297 EAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILI 356

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +  +     + ++M       N ++YN L+ G C+E ++  A   L+ M   G  
Sbjct: 357 NFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 416

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN L+   C  G+ D A  + NQL S G SP ++TYN +I   +K G ++ A++L
Sbjct: 417 PDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAEL 476

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G+ P  +TY+ L+        +++A +++  M+     P   TY  ++ GLC 
Sbjct: 477 LEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 536

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                 A      M E   +P    Y ++I G
Sbjct: 537 AQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 160/315 (50%), Gaps = 3/315 (0%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L +NG  ++G +F E+M   G  P +     LI  +C  GK  +  ++ + + +     +
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN LI G CK   + +A ++L++M +A   P+V+TYN ++   CD+G+  +A  + +
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +       P V+TY +LI A         A  L+ EM ++G  P  VTY +LI+   +  
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A +  + M   G  P+V T+ +++  +C  G   +A +L   M      P+ V +N
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I   C++    RA+ +L +M + G +PN  SY+  +   CQ+ K   A   L  M+  
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 555 GLKPSVSLYNILYRA 569
           G  P +  YN L  A
Sbjct: 414 GCYPDIVTYNTLLTA 428



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           E    I +   VR+ ++E+  +    M   G  PDV     LI G C  G  ++A+++  
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            +  +   P+ + YN++I GYCK G   +AL++L  M+   + P++ +Y++ +  LC  G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSG 223

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           K  EA  +L++ ++    P V  Y IL  A  N
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 245/487 (50%), Gaps = 53/487 (10%)

Query: 91  HLTQLFPSSSNPVTKSRLYE---SIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNS 146
           H +Q + + +N ++  ++++   SII   +  +  D A   F  +LD+ G R  +  F++
Sbjct: 99  HTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDA 158

Query: 147 LLIFVIKSCSFDKGWL------FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           L+I       +D G++      F        ++  +  G L+     +      +   ++
Sbjct: 159 LMI-----AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + E GF P V  Y  LI+  CK G I  AK++F +I + GL  T  ++  LI GL K+  
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT--- 317
             +GF   + M+ N + P ++TY+ LIH  C EG++    +LFDEM+ R +  N +T   
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 318 --------------------------------YNTLICGLCKEMRVQEAERLLDQMKMAG 345
                                           YNTL+ GLCK   V +A +L+D+M+M G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ ITY  LIDG+C  G+ + A  +   +   G     V +  LI  F + G  + A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +REM E G+ P + TYT++ID + +  +++  F++   MQ +G  P V TY VL++GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G MK A+ L  +M    + P+D+ YN+++ G+CK G +   L+L    NEKGL+ + 
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL---RNEKGLIVDY 570

Query: 526 ASYSSTI 532
           A Y+S +
Sbjct: 571 AYYTSLV 577



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 232/497 (46%), Gaps = 69/497 (13%)

Query: 30  SLFNW-ASRQGLQHTPQSISI----------------ILRLLLSKMSSHSHAAAQTLILK 72
           S FNW +S    +HT QS                   I+R L+S+    S A+    IL 
Sbjct: 86  SFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILD 145

Query: 73  IISGRITS------------SSFTPRSLLC-----------------HLTQLFPSSSNPV 103
               R ++            S F   ++ C                 +L     +S++PV
Sbjct: 146 TAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPV 205

Query: 104 T---------------KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           T               K + Y  +I+   K      A   F+++   G+RP + +FN+L+
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 149 IFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
             + KS + D+G+       ENR  +  DV+++ +LI G C+ G L+ A ++ +++++ G
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENR--IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
             PN + +T+LIDG C++  I+ A   + ++  +G+      Y  L+ GL K G      
Sbjct: 324 LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           +  ++M++ G+ P   TY  LI  YC EG +    ++   M    V  + V +  LI G 
Sbjct: 384 KLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C++ RV++AER L +M  AG+ P+  TY  +IDG+C  G     F+L  +++ NG  P V
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           +TYNVL+    K G  K A+ L+  M   G+TP ++TY IL++   ++    KA ++  L
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKL 560

Query: 446 MQKSGFSPDVYTYGVLI 462
             + G   D   Y  L+
Sbjct: 561 RNEKGLIVDYAYYTSLV 577



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 37/364 (10%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF- 163
           K + Y  +I+   K      A   F+++   G+RP + +FN+L+  + KS + D+G+   
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281

Query: 164 --FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
               ENR  +  DV+++ +LI G C+ G L+ A ++ +++++ G  PN + +T+LIDG C
Sbjct: 282 KTMEENR--IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           ++  I+ A   + ++  +G+      Y  L+ GL K G      +  ++M++ G+ P   
Sbjct: 340 RSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKI 399

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI  YC EG +    ++   M    V  + V +  LI G C++ RV++AER L +M
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG-- 399
             AG+ P+  TY  +IDG+C  G     F+L  +++ NG  P V+TYNVL+    K G  
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM 519

Query: 400 -NSKM-----------------------------ASDLVREMEERGITPSEVTYTILIDS 429
            N+ M                             A DL++   E+G+      YT L+  
Sbjct: 520 KNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSE 579

Query: 430 FVRS 433
           + +S
Sbjct: 580 YNKS 583


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 203/391 (51%), Gaps = 3/391 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+     LI+G C  G   KA ++L  LE  G  P+V+ Y  +I G CK G+I  A  + 
Sbjct: 136 DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +   + +     TY  ++  L  +G  K   E  ++M      P + TY  LI   C +
Sbjct: 196 DR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KL DEMR R    +VVTYN L+ G+CKE R+ EA + L+ M  +G  PNVIT+
Sbjct: 253 SGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A +L   +   G SPSVVT+N+LI    + G    A D++ +M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 372

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P+ ++Y  L+  F +   M++A E    M   G  PD+ TY  ++  LC  G +++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G + +A++LL EM  K L P+  +YSS +G
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L ++GK  EA    ++  ++G++P+   +N
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 224/436 (51%), Gaps = 7/436 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           Q+  SG+  R+  F++L      S S   G  F S N   V  DV S   L +     G+
Sbjct: 62  QVESSGLNGRAQKFDTLASG--HSNSNGNGH-FSSANSSFVLEDVESNNHL-RQLVRTGE 117

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L + F+ L  +   G  P+++  T+LI G C+ G   +A  +   +   G V    TY V
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I G  K G   +     ++M    VSP + TYN ++   C+ GK+ +  ++ D M  R+
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +V+TY  LI   C++  V +A +LLD+M+  G +P+V+TYN L++G C  G  D+A 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +  N + S+G  P+V+T+N+++R+    G    A  L+ +M  +G +PS VT+ ILI+  
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R   + +A ++   M K G  P+  +Y  L+HG C +  M  A +    M      P+ 
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN M+   CK+G    A+ +L +++ KG  P + +Y++ I  L + GK  +A  LL++
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 551 MLKLGLKPSVSLYNIL 566
           M    LKP    Y+ L
Sbjct: 475 MRAKDLKPDTITYSSL 490



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 216/422 (51%), Gaps = 2/422 (0%)

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           SG  P   T+N ++    K+   +        +R  V  DV ++  +++  C++G L +A
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVL--DRMSVSPDVVTYNTILRSLCDSGKLKQA 223

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            EVL+++ +    P+V+ YT LI+  C++  + +A  L  ++ + G      TY VL+ G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNG 283

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + K G   +  +F   M  +G  P++ T+N ++   C+ G+  +  KL  +M  +  + +
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+N LI  LC++  +  A  +L++M   G  PN ++YN L+ GFC   + D+A     
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ S G  P +VTYN ++ A  K G  + A +++ ++  +G +P  +TY  +ID   ++ 
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
              KA ++   M+     PD  TY  L+ GL  +G + EA K F+      + PN V +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ G CK   + RA+  L  M  +G  P   SY+  I  L  +G   EA  LLN++   
Sbjct: 524 SIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583

Query: 555 GL 556
           GL
Sbjct: 584 GL 585



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++ ++I G C+AG++N A  VL++   M  SP+VV Y +++   C +G +++A  + 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ +        TYT+LI    ++       +  ++M+  G +P + TYN L++  C E
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E  K  ++M       NV+T+N ++  +C   R  +AE+LL  M   G SP+V+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+  C  G   +A  +  ++  +G  P+ ++YN L+  F K      A + +  M  
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  P  VTY  ++ +  +   +E A E+ + +   G SP + TY  +I GL   G   +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KL + M    L+P+ + Y+ ++ G  +EG    A++   E    G+ PN  +++S + 
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIML 527

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +   A   L  M+  G KP+ + Y IL
Sbjct: 528 GLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 200/417 (47%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +I  + K+   + AL    +M    V P   T+N++L  +  S    +         
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C    DV ++ ILI+  C    + +A ++L+++ + G +P+VV Y  L++G CK G 
Sbjct: 232 QRDCYP--DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A      +   G      T+ +++  +   G   D  +    M   G SPS+ T+N 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+  C +G +     + ++M       N ++YN L+ G CKE ++  A   L++M   G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+++TYN ++   C  G+ + A  + NQL S G SP ++TYN +I   +KAG +  A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ EM  + + P  +TY+ L+    R   +++A + +   ++ G  P+  T+  ++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C       A      M     +P +  Y ++I G   EG +  AL LL E+  KGL+
Sbjct: 530 CKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL     +PV  +  Y ++ID   K+  + +A+    +M    ++P + T++SL+  +
Sbjct: 437 LNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +    D+   FF E  R  V  +  +F  ++ G C+    ++A + L  +   G  P  
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
             YT LI+G    G  + A  L  ++   GL+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 247/519 (47%), Gaps = 40/519 (7%)

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           L CHL +L       V       ++ID   K R   +A   F  M + G+ P   T+  L
Sbjct: 322 LACHLGEL-----GMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376

Query: 148 LIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           +  + K    D     F   R K + + VY +  LI G C+  + ++A  +LN++ E G 
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           +P+   Y+ LI G C+ GD+  A  L R++   G+    +T+T LI G  K+G   +   
Sbjct: 437 APSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAAR 496

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            ++KM  + V P+  T+N +I  YC  G V + F+L+D+M  R +  +  TY +LI  LC
Sbjct: 497 LFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
             +   +A+  +D ++   +  N  +   L+ GFC  G   + + +++++++ G    ++
Sbjct: 557 LTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLI 616

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           ++ V++ A  K  + +  S L REM+E+G+ P  V +T +ID   + +++ +A   +  M
Sbjct: 617 SFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKM 676

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND---------------- 490
              G SP+V TY VLI+ LC  G +  A  L   M   +  PN                 
Sbjct: 677 IADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGEL 736

Query: 491 ------------------VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
                             V +N +I G+CK G    A+ L+    E G  P+  SYS+ I
Sbjct: 737 EKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTII 796

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
             LC+ G   +A  L N+ML  GLKP +  YNIL R  N
Sbjct: 797 NELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCN 835



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 218/423 (51%), Gaps = 1/423 (0%)

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVEL 173
           ++L+ R +  A       L SG+  +  T + +L  +IK   F      F E  +CK  L
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D Y +   I+  CE  +L+ A  +L ++E  G   + V Y  L+ G C+N  +  A  + 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + E G+VA + TY  L+ G  +    +   E  + M      PS+ + + ++      
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + + F+L   +    +  N+   N LI  LCK+ R +EAERL   M   G+ PN +TY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI   C  G  D A  +F++++  G   +V  YN LI  + +  N   A  L+ EM E
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ PS  +Y+ LI    R  D+  A E++  M ++G S +VYT+  LI G C  GNM E
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A++LF+ M ++ + PN+V +N+MI GYC+ GN  +A +L  +M ++GL P+  +Y S I 
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553

Query: 534 VLC 536
           VLC
Sbjct: 554 VLC 556



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 206/425 (48%), Gaps = 35/425 (8%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V S   ++ G  + G ++KAF +   L E+G  PN+    +LID  CK+     A+ LFR
Sbjct: 300 VASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFR 359

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +   GL   + TY +LI  L K G+  D    +++M+  G+  ++Y YN LI+ YC   
Sbjct: 360 GMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHD 419

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
              +   L +EM  + +A +  +Y+ LI GLC++  +  A  L  +M   G+S NV T+ 
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFT 479

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC  G  D+A RLF+++  +   P+ VT+NV+I  + + GN + A  L  +M +R
Sbjct: 480 TLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR 539

Query: 415 GITPSEVTY-----------------------------------TILIDSFVRSDDMEKA 439
           G+TP   TY                                   T L+  F +   + + 
Sbjct: 540 GLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTET 599

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           + ++  M+  G   D+ ++ V+++      + ++ S LF  M E  ++P++V +  MI  
Sbjct: 600 YHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDV 659

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           + KE N  +AL    +M   G  PN+ +Y+  I  LC+ G    A++L  +ML     P+
Sbjct: 660 HSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPN 719

Query: 560 VSLYN 564
              YN
Sbjct: 720 SFTYN 724



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 242/522 (46%), Gaps = 31/522 (5%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQL-FPSSSNPVTKSRL 108
           +LRL LS   +     A  ++  +I  R  + +   R L   + Q  FP          +
Sbjct: 147 VLRLSLSSGIAMKQYTASQILFALIKIRQFALA---RDLFDEMVQCKFP------LDEYV 197

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV-----------IKSCSF 157
           Y + I A+ + R  D A     +M   GV+  +  +N L+  +           +K+   
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV 257

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           ++G          +  D  ++  L+ G C   +L  A E+ + +  + F P+V   + ++
Sbjct: 258 ERG----------IVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMV 307

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  K G I++A  L   +GELG+V        LI  L K+   ++    +  M   G+ 
Sbjct: 308 DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLE 367

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  LIH  C  G + +   +FD MR + +   V  YN+LI G C+     +A  L
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L++M   G++P+  +Y+ LI G C  G+   A  L  ++  NG S +V T+  LI  F K
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            GN   A+ L  +M +  + P+EVT+ ++I+ + R  ++ KAF++Y  M   G +PD YT
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI  LC+     +A +  + +    +  N      +++G+CKEG       +  EM 
Sbjct: 548 YRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMR 607

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            +G+  ++ S++  +    +     +  VL  +M + G+KP 
Sbjct: 608 ARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD 649



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 150/297 (50%)

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+  GV  S   YN L++  C   +V E  ++ + M  R +  + VTY TL+ G C+  
Sbjct: 220 RMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTE 279

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            ++ A  + D M      P+V + + ++DG    G  DKAFRL   L   G  P++   N
Sbjct: 280 ELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACN 339

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI    K    + A  L R M  RG+ P+EVTY ILI S  +   M+ A  M+  M++ 
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G    VY Y  LI+G C   N  +A  L N M E  L P+   Y+ +I G C++G+   A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + L  EM   G+  N+ ++++ I   C+DG   EA  L ++M+   + P+   +N++
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 181/376 (48%), Gaps = 4/376 (1%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A ++ +++ +  F  +  +YT+ I   C+  +++ A+ L  ++   G+  +   Y VL+ 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL +N    +  E    M   G+     TY  L++ +C   ++    ++ D+M       
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +V + + ++ GL K   + +A RL   +   G+ PN+   N LID  C      +A RLF
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             + + G  P+ VTY +LI +  K G    A  +   M E+GI  +   Y  LI+ + + 
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D+  +A  + + M + G +P   +Y  LI GLC KG++  A +L   M    +  N   +
Sbjct: 419 DNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTF 478

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I G+CK+GN   A RL  +M +  +VPN  +++  I   C+ G   +A  L +QM+ 
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD 538

Query: 554 LGLKPSVSLYNILYRA 569
            GL P     N  YR+
Sbjct: 539 RGLTPD----NYTYRS 550



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I    K    D+A   F +M+DS V P   TFN ++    +  +  K +  + +  
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  D Y++  LI   C      KA E ++ LE      N    T+L+ G CK G + 
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               ++ ++   G+     ++TV++    K    +     + +M+  GV P    + C+I
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  E  + +    +D+M     + NVVTY  LI  LCK   +  A+ L ++M +    
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TYN  +D   + GE +KA ++ +     G   + VT+N LI+ F KAG  + A DL
Sbjct: 718 PNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDL 776

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++   E G  P  ++Y+ +I+   +  D+ KAF++++ M   G  PD+  Y +LI    +
Sbjct: 777 MQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNI 836

Query: 468 KGNMKEASKLFNSMWETK 485
            G   +   +++ M   K
Sbjct: 837 HGEFDKGLGIYSDMVNLK 854



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 137/293 (46%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G++   YT + ++       + +    LFDEM   +   +   Y   I   C+   +  
Sbjct: 154 SGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDG 213

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  LL +M+  G+  + + YN L+ G C      +A  + N +   G     VTY  L+ 
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVY 273

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F +    +MA ++  +M      PS  + + ++D   +   ++KAF +   + + G  P
Sbjct: 274 GFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVP 333

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +++    LI  LC     +EA +LF  M    LEPN+V Y ++I   CK G    AL + 
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMF 393

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             M EKG+   +  Y+S I   CQ   + +A  LLN+M++ GL PS + Y+ L
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPL 446



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 191/438 (43%), Gaps = 12/438 (2%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSK------MSSHSHAAAQTLILKIISGRITS 80
           +A  L N    +GL  +  S S ++  L  K      M  H   A   +   + +     
Sbjct: 423 QARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLI 482

Query: 81  SSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           S F     +    +LF     S+ V     +  +I+ + +     +A   + QM+D G+ 
Sbjct: 483 SGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLT 542

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           P + T+ SL+  +  +    K   F    EN C V L+ +S   L+ G C+ G L + + 
Sbjct: 543 PDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVV-LNSFSLTTLMYGFCKEGRLTETYH 601

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           + +++   G   +++ +T ++    K  D E+  +LFR++ E G+      +T +I    
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K          ++KM  +G SP++ TY  LI+  C  G +S    L +EM       N  
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYN  +  L  E  +++A ++L    + G   N +T+N LI GFC AG+   A  L    
Sbjct: 722 TYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             +G  P  ++Y+ +I    K G+   A  L  EM  +G+ P  V Y ILI       + 
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEF 840

Query: 437 EKAFEMYSLMQKSGFSPD 454
           +K   +YS M    ++ D
Sbjct: 841 DKGLGIYSDMVNLKYADD 858



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 35/224 (15%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S+G +    T + ++ A  K     +A DL  EM +      E  YT  I ++    +++
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLD 212

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A  + + M+  G       Y VL++GLC    + EA ++ NSM E  +  ++V Y  ++
Sbjct: 213 GARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLV 272

Query: 498 FGYC-----------------------------------KEGNSYRALRLLGEMNEKGLV 522
           +G+C                                   K G+  +A RL   + E G+V
Sbjct: 273 YGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMV 332

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           PN+ + ++ I  LC+D ++ EAE L   M   GL+P+   Y IL
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%)

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           ++ A+D++R     GI   + T + ++ + ++      A +++  M +  F  D Y Y  
Sbjct: 141 ARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTA 200

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
            I   C   N+  A  L   M    ++ + V YN++++G C+      A+ +   M E+G
Sbjct: 201 GIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERG 260

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +V +  +Y + +   C+  +   A  + + ML L   PSV+
Sbjct: 261 IVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVA 301



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 59/138 (42%)

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           S++R      A ++  L   SG +   YT   ++  L        A  LF+ M + K   
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           ++ VY   I  YC+  N   A  LL  M  KG+  +   Y+  +  LC++ +  EA  + 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 549 NQMLKLGLKPSVSLYNIL 566
           N M++ G+      Y  L
Sbjct: 254 NSMVERGIVADEVTYRTL 271


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 241/466 (51%), Gaps = 6/466 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + +Y+++I A  K    ++ L    +ML  G  P  NTFN  +  + K     +   
Sbjct: 249 VPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAK 308

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  +    + +++G+L+ G C  G +++A  +LN++     +PNVV++ +LI+G  
Sbjct: 309 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYV 364

Query: 222 KNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
             G ++ AK ++   +  +G      TY  LI GL K G      E   +MQ+ G  P++
Sbjct: 365 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 424

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +C EG++ E   + DEM  + +A N V YN LI  LCK+ +VQ+A  +   
Sbjct: 425 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 484

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI G C   + ++A  L+  +   G   + +TYN LI AF + G 
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV +M  RG    ++TY  LI +  R+ ++EK   ++  M   G +P+  +  +
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+GLC  GN++ A +    M    L P+ V YN +I G CK G +  AL L  ++  +G
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y++ I   C++G + +A +LL++ +  G  P+   + IL
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 2/376 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAG 189
           +L+    P    FN+L+   +     D+      E+   V    D++++  LI G C+ G
Sbjct: 344 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L  A E++N+++  G  PNV+ YT LID  CK G +E A+ +  ++   GL      Y 
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI  L K+   +D    +  M   G  P ++T+N LI   C   K  E   L+ +M   
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  N +TYNTLI    +   +QEA +L++ M   G   + ITYN LI   C AG  +K 
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF  + S G +P+ ++ N+LI    + GN + A + +R+M  RG+TP  VTY  LI+ 
Sbjct: 584 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 643

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++   ++A  ++  +Q  G  PD  TY  LI   C +G   +A  L +   ++   PN
Sbjct: 644 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 703

Query: 490 DVVYNMMIFGYCKEGN 505
           +V + +++  + KEG+
Sbjct: 704 EVTWYILVSNFIKEGD 719



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 193/399 (48%), Gaps = 12/399 (3%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+ G C     N  +E+L++    G SP V  +  ++   C   +++ A  L + +   
Sbjct: 191 VLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 246

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L K G   +  +  E+M L G  P + T+N  IH  C   ++ E 
Sbjct: 247 GCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 306

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R    N  TY  L+ GLC+  +V EA  LL+++     +PNV+ +N LI+G
Sbjct: 307 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLING 362

Query: 360 FCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +   G  D+A  + ++ + S G  P + TYN LI    K G    A +L+ EM+ +G  P
Sbjct: 363 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TYTILID F +   +E+A  +   M   G + +   Y  LI  LC    +++A  +F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M     +P+   +N +IFG CK      AL L  +M  +G++ N  +Y++ I    + 
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA---KNNIE 574
           G   EA  L+N ML  G       YN L +A     NIE
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 10/417 (2%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSL---LCHLTQLFPS----SSNPVTKSRLYESIIDA 115
           H AA+ +   ++ G  T +SFT   L   LC + ++  +    +  P     L+ ++I+ 
Sbjct: 304 HEAAKLVDRMLLRG-FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLING 362

Query: 116 HLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
           ++     D+A    H+ ML  G  P   T+N+L++ + K           +E + K  E 
Sbjct: 363 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V ++ ILI   C+ G L +A  VL+++   G + N V Y  LI   CK+  ++ A  +F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G      T+  LI GL K    ++    Y+ M L GV  +  TYN LIH +   
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + E  KL ++M  R    + +TYN LI  LC+   +++   L + M   G++PN I+ 
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G C  G    A      +   G +P +VTYN LI    K G ++ A +L  +++ 
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            GI P  +TY  LI    +    + A  + S    SGF P+  T+ +L+     +G+
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 195/446 (43%), Gaps = 44/446 (9%)

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           W    +  C +  DVY   +LI     AG+      +L Q+++ G      ++  ++   
Sbjct: 100 WAGTQKGYCHM-FDVYY--MLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHY 156

Query: 221 CKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            + G   +A ++L    G      T  +Y V++  L      K     + +M   G+SP+
Sbjct: 157 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 216

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI----------------- 322
           +YT+  ++   C   +V     L  +M       N + Y TLI                 
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276

Query: 323 ------C------------GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
                 C            GLCK +R+ EA +L+D+M + G +PN  TY  L+ G C  G
Sbjct: 277 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 336

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE-MEERGITPSEVTY 423
           + D+A  L N++     +P+VV +N LI  +   G    A  ++ E M   G  P   TY
Sbjct: 337 KVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 392

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI    +   +  A E+ + MQ  G  P+V TY +LI   C +G ++EA  + + M  
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L  N V YN +I   CK+     AL + G+M+ KG  P+I +++S I  LC+  K+ E
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 512

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  L   ML  G+  +   YN L  A
Sbjct: 513 ALGLYQDMLLEGVIANTITYNTLIHA 538


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 224/433 (51%), Gaps = 2/433 (0%)

Query: 136 GVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G +   +T N+LL +F       + G L  +E       DV ++ +LI G C A +  +A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 195 FEVLNQLEE-MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           F V+ ++EE  G +P++  +  ++ G CK+G +  A   F      G     HTYT ++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L KN   +D     EK+  NG +P++ TYN L++  C  G++ E   L  ++       
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VVTY +LI GL KE R  EA +L  +M + G+  + + Y  LI G   AG+  +A  ++
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             + S G  P VVT + +I    KAG    A  + + ME RG+ P+EV Y+ LI    ++
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             M+ A EM + M+K+  +PD  TY +LI GLC  G+++ A   F+ M E   +P+   Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N+++ G+CK GN+  A  +  +M+     PN+ +Y + I  LC+  +  +A +    M +
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473

Query: 554 LGLKPSVSLYNIL 566
            G  P   +Y+ L
Sbjct: 474 RGCPPDSFVYSSL 486



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 221/460 (48%), Gaps = 8/460 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF--- 164
           +  +I  +  +R  ++A     +M  D GV P   T N +L  + KS         F   
Sbjct: 97  WNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETT 156

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           + N C +  D++++  ++    +   +  A  ++ ++   G +P +  Y +L++G CK G
Sbjct: 157 TTNGCTI--DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L RKI + G      TYT LI GL K     + ++ +++M L G+      Y 
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI      GK+ +   ++  M  +    +VVT +T+I GLCK  R+  A R+   M+  
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN + Y+ LI G C A + D A  +  Q+K    +P  +TYN+LI    K+G+ + A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                EM E G  P   TY IL+  F ++ + + A  ++  M  S  SP+V TYG LI G
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC +  + +AS  F  M E    P+  VY+ ++ G CK G       L  EM   G V N
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VAN 513

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             + +  I  LC+  +  EA  L N + K G+ P    YN
Sbjct: 514 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYN 552



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 204/432 (47%), Gaps = 36/432 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+D   K++    A+    ++  +G  P   T+N+LL                    
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALL-------------------- 207

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                          G C+ G L +A ++L ++ + G +P+VV YTSLIDG  K      
Sbjct: 208 --------------NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF+++   GLV     YT LI GL + G        Y+ M   G  P + T + +I 
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G++    ++F  M  R +A N V Y+ LI GLCK  ++  A  +L QMK A  +P
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 373

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + ITYN LIDG C +G+ + A   F+++   G  P V TYN+L+  F KAGN+  A  + 
Sbjct: 374 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVF 433

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M     +P+ VTY  LI    +   + KA   +  M++ G  PD + Y  L+ GLC  
Sbjct: 434 DDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKS 493

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G ++    LF+ M  + +  N      +IF  CK      A+ L   + ++G+ P+  +Y
Sbjct: 494 GKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAY 551

Query: 529 SSTIGVLCQDGK 540
           +S I  L +  K
Sbjct: 552 NSIISTLIKSAK 563



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 7/232 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y ++I    K+R  D AL    QM  +   P + T+N L+  + KS   +    FF   
Sbjct: 342 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 401

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  CK   DVY++ IL+ G C+AG+ + A  V + +     SPNVV Y +LI G CK  
Sbjct: 402 LEAGCKP--DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            + +A + F+ + E G       Y+ L+ GL K+G  + G   +++M+ +GV+ S  T  
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRT 518

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            LI   C   +V E   LF+ +R +E   +   YN++I  L K  +V    R
Sbjct: 519 RLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNSIISTLIKSAKVNPCTR 569



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 1/226 (0%)

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G   +V T N L+D F       +A  L     +    P V T+NVLI  +  A   + A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 405 SDLVREMEER-GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             ++REMEE  G+ PS  T+ +++    +S  +  A + +     +G + D++TY  ++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            L     +++A  L   +      P    YN ++ G CK G    A+ LL ++ + G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++ +Y+S I  L ++ +  EA  L  +M   GL      Y  L R 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 1/129 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           SSS+       Y ++I    K R   +A  YF  M + G  P S  ++SL+  + KS   
Sbjct: 437 SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           + G + F E       +  +   LI   C+A  +++A  + N + + G  P+   Y S+I
Sbjct: 497 EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 555

Query: 218 DGCCKNGDI 226
               K+  +
Sbjct: 556 STLIKSAKV 564


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 216/385 (56%), Gaps = 3/385 (0%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK-NGDIERAKM 231
           +DV+++  L+KG C+ G +++A  V +++E +   P+VV Y +LIDGC K  G  E  ++
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L       G+     T+ +++    K G   +  +   KM  +GVSP  +TYN +I+ +C
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFC 254

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK+ E F++ DEM  + +  ++ T NT++  LC E + +EA  L  + +  G   + +
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEV 314

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  LI G+    + DKA +L+ ++K  G  PSVV+YN LIR    +G +  A D + E+
Sbjct: 315 TYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNEL 374

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E+G+ P EV+  I+I  +     ++KAF+ ++ M  + F PD++T  +L+ GLC    +
Sbjct: 375 LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDML 434

Query: 472 KEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++A KLFNS W +K    DVV YN MI   CKEG    A  L+ +M  K   P+  +Y++
Sbjct: 435 EKAFKLFNS-WISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNA 493

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLG 555
            +  L   G+  EAE  ++++ + G
Sbjct: 494 IVRALTHAGRTEEAEKFMSKLSETG 518



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 22/416 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++ID   K R S +      +M    GV P + T N ++ +  K    ++     S+ 
Sbjct: 175 YNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEA----SDA 230

Query: 168 RCK-----VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
             K     V  D +++  +I G C+AG L +AF +++++   G  P++    +++   C 
Sbjct: 231 VVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCM 290

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
               E A  L  K  + G +  + TY  LI G FK   +    + +E+M+  G+ PS+ +
Sbjct: 291 EKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVS 350

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   C  GK  +     +E+  + +  + V+ N +I G C E  V +A +  ++M 
Sbjct: 351 YNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMV 410

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
                P++ T N L+ G C     +KAF+LFN   S   S  VVTYN +I    K G   
Sbjct: 411 GNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLD 470

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT----- 457
            A DL+ +ME +   P + TY  ++ +   +   E+A +  S + ++G +   +      
Sbjct: 471 EAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQEL 530

Query: 458 -------YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                  Y   I  LC +G  KEA KLF    +  +  N   Y  ++ G+ K   S
Sbjct: 531 DASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKS 586


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 234/448 (52%), Gaps = 7/448 (1%)

Query: 115 AHLKSRLS---DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           A    RLS   D+A+  F  M+ S   P    F+ LL  + KS ++D    LF +   C 
Sbjct: 40  AFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICG 99

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D+Y++ I+I   C       A  V+ ++ + G+ P+VV  +SLI+G C+   +  A 
Sbjct: 100 IGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAV 159

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  K+ E+        Y  +I G  K GL  +    + +M+ +GV     TYN L+   
Sbjct: 160 DLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGL 219

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G+ S+  +L  +M  R++  NV+T+  LI    +E +  EA++  ++M    I P+V
Sbjct: 220 CCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDV 279

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN +I G C  G+ D+A ++ + + + G  P VVTYN LI  F K       + LVRE
Sbjct: 280 FTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVRE 339

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M +RG+    VT+  +I  + ++   + A E++S M   G  P++ TY +L++GLC    
Sbjct: 340 MSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWR 396

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++A  LF SM ++++E +   YN++I G C  GN   A  L   ++ KGL P++ +Y++
Sbjct: 397 VEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTT 456

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            I   C+   W +A+ L  +M + GL P
Sbjct: 457 MISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 3/300 (1%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            +  M++ G+   LYTYN +I+  C   +      +  +M       +VVT ++LI G C
Sbjct: 91  LFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  RV  A  L+ +M+      +V+ YN +IDGFC  G  + A  LF +++ +G     V
Sbjct: 151 QGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTV 210

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L+     +G    A+ L+R+M  R I P+ +T+T LI++FVR     +A + Y  M
Sbjct: 211 TYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM 270

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    PDV+TY  +IHGLCM G + EA ++ + M      P+ V YN +I G+CK    
Sbjct: 271 IRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRV 330

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +L+ EM+++GLV +  ++++ I    Q G+   A+ + ++M   G +P++  Y+IL
Sbjct: 331 DEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSIL 387



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 41/313 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV---------------- 151
           +Y +IID   K+ L + AL  F +M   GVR  + T+NSL+  +                
Sbjct: 176 IYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDM 235

Query: 152 -------------------IKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGD 190
                              ++   F +   F+ E   RC ++ DV+++  +I G C  G 
Sbjct: 236 VMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC-IDPDVFTYNSMIHGLCMHGQ 294

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++A ++L+ +   G  P+VV Y +LI+G CK   ++    L R++ + GLV    T+  
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I G F+ G      E + +M   G  P++ TY+ L++  C   +V +   LF+ M+  E
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  ++ TYN +I G+C    V++A  L   +   G+ P+V+TY  +I GFC     DKA 
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471

Query: 371 RLFNQLKSNGQSP 383
            L+ +++ +G  P
Sbjct: 472 FLYRKMQEDGLLP 484



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 125/271 (46%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E   LF  M       ++V ++ L+  + K         L   M++ GI  ++ TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I+  C       A  +  ++   G  P VVT + LI  F +      A DLV +MEE  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
                V Y  +ID F ++  +  A  ++  M++ G   D  TY  L+ GLC  G   +A+
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +L   M    + PN + +  +I  + +EG    A +   EM  + + P++ +Y+S I  L
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C  G+  EA+ +L+ M+  G  P V  YN L
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTL 320



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 115/236 (48%)

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           M + EA  L   M  +   P+++ ++KL+     +   D    LF+ ++  G    + TY
Sbjct: 48  MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N++I    +     +A  +V +M + G  P  VT + LI+ F + + +  A ++ S M++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
                DV  Y  +I G C  G +  A  LF  M    +  + V YN ++ G C  G    
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSD 227

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           A RL+ +M  + +VPN+ ++++ I    ++GK+ EA+    +M++  + P V  YN
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  LF  +  +   PS+V ++ L+   +K+ N  +   L   ME  GI     TY I+
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+   R      A  +   M K G+ PDV T   LI+G C    +  A  L + M E + 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           + + V+YN +I G+CK G    AL L G M   G+  +  +Y+S +  LC  G+  +A  
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L+  M+   + P+V  +  L  A
Sbjct: 231 LMRDMVMRDIVPNVITFTALINA 253



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 66/134 (49%)

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           S ++++A +++  M +S   P +  +  L+  +    N      LF++M    +  +   
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I   C+      AL ++G+M + G  P++ + SS I   CQ  +   A  L+++M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 553 KLGLKPSVSLYNIL 566
           ++  K  V +YN +
Sbjct: 167 EMRCKLDVVIYNTI 180


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 213/405 (52%), Gaps = 4/405 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G C  G+L KA ++++ ++  G  PN   Y S+I   CK G    A+ + 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++    ++     YT LI G FK G  +   +++++M    +SP   TY  LI  +   
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E   LF EM  R +  + VTY TLI   CK   +  A  L ++M   G++PN++TY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  GE D A  L ++++  G   +V  YN ++    KAGN + A  L++EME 
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            GI P  +TYT +ID++ R  D++KA ++   M   G  P V T+ VL++G CM G +++
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +L   M E  + P+ + YN ++  +C   +     ++   M  +G+ P+  +Y+  I 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL----YRAKNNIE 574
             C+     EA  L  +M++ G  P+V+ YN L    Y+ K  +E
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 210/390 (53%), Gaps = 2/390 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F I  +   E G L++A ++L++L   G    V    + +     N   E  +M  +  
Sbjct: 192 AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--EGIEMAIKVF 249

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G+     +Y ++I  L + G  K+      +M     +P + +Y+ +I  YC+ G++
Sbjct: 250 CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGEL 309

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  KL D+M+ + +  N  TYN++I  LCK  +  EAE++L +M    I P+ + Y  L
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GF   G    A + F+++ S   SP  +TY  LI+ F + G      +L  EM  RG+
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P EVTYT LID + ++ +M  AF +++ M + G +P++ TYG LI GLC  G +  A++
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L + M +  L+ N  +YN M+ G CK GN  +A++L+ EM   G+ P+  +Y++ I   C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + G   +A  LL +ML  GL+P+V  +N+L
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 230/459 (50%), Gaps = 6/459 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+   SS P   S  Y ++ID +       +AL     M   G++P   T+NS+++ +
Sbjct: 281 LMQMDFRSSTPDVVS--YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 152 IK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K   SF+   +       K+  D   +  LI G  + G +  A +  +++     SP+ 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + YT+LI G  + G +   + LF ++   GL   + TYT LI    K G   + F  + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G++P++ TY  LI   C  G++    +L DEMR + +  NV  YN+++ G+CK   
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +++A +L+ +M++AGI P+ ITY  +ID +C  G+ DKA +L  ++   G  P+VVT+NV
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  F   G  +    L+  M E+GI P  +TY  L+      + M    ++Y  M+  G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +PD  TY +LI G C   N+KEA  L+  M E    P    YN +I  + K+     A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            L  EM   GLV +   Y+  + +  ++G   + E+ LN
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEG---DVEITLN 734



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 208/399 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  +  S+ I+I   C  G + +A  +L Q++    +P+VV Y+++IDG C  G++++A 
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L   +   GL   ++TY  +I  L K G   +  +   +M    + P    Y  LIH +
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G V    K FDEM  ++++ + +TY TLI G  +  +V E + L  +M   G+ P+ 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  LID +C AGE   AF L N++   G +P++VTY  LI    K G    A++L+ E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++G+  +   Y  +++   ++ ++E+A ++   M+ +G  PD  TY  +I   C  G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A KL   M +  L+P  V +N+++ G+C  G      RLLG M EKG+VP+  +Y++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   C          +  +M   G+ P  + YNIL + 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 211/398 (53%), Gaps = 9/398 (2%)

Query: 181 LIKGCCEAG---------DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           ++ G C+ G         D+N AF V N + + G   N V YT+LI G C+ G ++    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F+K+ E     T  TYTV++  LF++G + +    + +M+  G  P+++TY  +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            E K+ EG ++ DEM  + +  +V TYN LI G CKE  V+ A+ +LD M     +PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN+LI GFC      +A  L +++  +  +PSVVTYN LI    K G    A  L+  M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E G+ P + TY++ ID+  +   +E+A  +++ +++ G   +   Y  LI G C  G M
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A+ L + M      PN   YN +I G CKE     AL L+  M +KGL   + +Y+  
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  + ++G +  A  +L+QM+  G +P V +Y     A
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/393 (33%), Positives = 199/393 (50%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+  LI G CE G +++   +  ++ E    P V  YT ++    ++G    A  LF ++
Sbjct: 41  SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G     HTYTV+I  + K    ++G    ++M   G+ PS+ TYN LI  YC EG V
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
               ++ D M       N  TYN LICG C++  V  A  LL +M  + ++P+V+TYN L
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C  G  D A+RL N +  NG  P   TY+V I    K G  + A+ L   ++E+GI
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             +EV YT LID + ++  M+ A  +   M      P+  TY  LI GLC +  ++EA  
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALL 340

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L  SM +  L+     Y ++I    KEG+   A R+L +M   G  P++  Y++ I   C
Sbjct: 341 LMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFC 400

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             G   EAE +++ M + G+ P    Y ++  A
Sbjct: 401 TRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 224/488 (45%), Gaps = 30/488 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++ID + K  + + A      M  +   P   T+N L+    +  +  +     S+  
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             ++   V ++  LI G C+ G L+ A+ +LN + E G  P+   Y+  ID  CK G IE
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIE 266

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +LF  + E G+ A +  YT LI G  K G   D     ++M      P+  TYN LI
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI 326

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C E KV E   L + M  + + C V TY  LI  + KE     A R+LDQM  +G  
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V  Y   I  FC  G   +A  + + +   G  P  +TY ++I A+   G    A D+
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD-----------------------------DMEK 438
           ++ M + G  PS  TY+ LI   ++ +                               E 
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E++  M + G SP++ TY  LI GLC  G +  A KLF+ M E  + P++ +YN ++ 
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             C+ G    A+RL+G M E G +P + S +     L ++G   +A+V+ + +L+ G   
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626

Query: 559 SVSLYNIL 566
               + IL
Sbjct: 627 DEVAWKIL 634



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 211/425 (49%), Gaps = 1/425 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    +    D+ +  F +M +    P   T+  ++  + +S    +    FSE R
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  E +++++ ++I   C+   L +   +L+++ E G  P+V  Y +LIDG CK G +E
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +   +        + TY  LICG  +            KM  + ++PS+ TYN LI
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI 221

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G +   ++L + M    V  +  TY+  I  LCK+ R++EA  L + +K  GI 
Sbjct: 222 HGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIK 281

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y  LIDG+C AG+ D A  L +++ +    P+  TYN LI    K    + A  L
Sbjct: 282 ANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLL 341

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M ++G+  +  TYTILI + ++  D + A  +   M  SG+ PDVY Y   IH  C 
Sbjct: 342 MESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCT 401

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +GN+KEA  + + M+E  + P+ + Y ++I  Y   G    A  +L  M + G  P+  +
Sbjct: 402 RGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT 461

Query: 528 YSSTI 532
           YS  I
Sbjct: 462 YSCLI 466



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 221/462 (47%), Gaps = 8/462 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           ++++A+L + + + A   F+ M   G R    ++ +L+  + +    D+G   F + R  
Sbjct: 10  NLVEANLNNDV-NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMR-- 66

Query: 171 VELDVY----SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            E D Y    ++ +++    E+G   +A  + +++ E G  PN+  YT +I+  CK   +
Sbjct: 67  -EDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKL 125

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E  + +  ++ E GLV +  TY  LI G  K G+ +   E  + M  N  +P+  TYN L
Sbjct: 126 EEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNEL 185

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C +  V     L  +M    +  +VVTYN+LI G CK   +  A RLL+ M   G+
Sbjct: 186 ICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV 245

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  TY+  ID  C  G  ++A  LFN LK  G   + V Y  LI  + KAG    A+ 
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M      P+  TY  LID   +   +++A  +   M + G    V TY +LI  + 
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G+   A ++ + M  +  +P+  +Y   I  +C  GN   A  ++  M E+G++P+  
Sbjct: 366 KEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           +Y+  I      G    A  +L +M   G  PS   Y+ L +
Sbjct: 426 TYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK 467



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 177/388 (45%), Gaps = 30/388 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K+   D A     +ML     P S+T+N+L+  + K     +  L     
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K ++  V ++ ILI    + GD + A  +L+Q+   G+ P+V IYT+ I   C  G+I
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNI 405

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +   + E G++    TYT++I      GL    F+  ++M   G  PS +TY+CL
Sbjct: 406 KEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465

Query: 287 IHEYCNEG-----------------------------KVSEGFKLFDEMRHREVACNVVT 317
           I     E                              K     +LF++M     + N+ T
Sbjct: 466 IKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINT 525

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  LI GLCK  R+  A++L D M   G+SP+   YN L++  C+ G    A RL   + 
Sbjct: 526 YAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMM 585

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            +G  P + + NVL     + G+ + A  +   + + G    EV + ILID  +++   +
Sbjct: 586 EHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSD 645

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
              E+  +M+  G      TY +LI GL
Sbjct: 646 GCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 239/561 (42%), Gaps = 43/561 (7%)

Query: 3   QSKQGEGQALTLNLISRMAKLPPLKAF-SLFNWASRQGLQHTPQSISIILRLLLSKMSSH 61
           ++K  EG+ +   ++ +   +P +  + +L +   ++G+    Q I       L  M S+
Sbjct: 122 ETKLEEGRRILDEMVEK-GLVPSVPTYNALIDGYCKEGMVEAAQEI-------LDLMHSN 173

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRL 121
           S    +    ++I G     +      L  L+++  S   P   +  Y S+I    K   
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMAL--LSKMLESRLTPSVVT--YNSLIHGQCKIGY 229

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
            D A    + M ++GV P   T++  +  + K    ++  + F+  + K ++ +   +  
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C+AG ++ A  +L+++      PN   Y +LIDG CK   ++ A +L   + + G
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L  T  TYT+LI  + K G         ++M  +G  P +Y Y   IH +C  G + E  
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG- 359
            +   M  R V  + +TY  +I        +  A  +L +M   G  P+  TY+ LI   
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469

Query: 360 ----------------------FCDAGET------DKAFRLFNQLKSNGQSPSVVTYNVL 391
                                 F D  +       + A  LF ++  +G SP++ TY  L
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I    K G   +A  L   M ERG++PSE  Y  L++          A  +   M + G 
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGH 589

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P + +  VL  GL  +G+ ++A  +F+++ +     ++V + ++I G  K G S     
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSE 649

Query: 512 LLGEMNEKGLVPNIASYSSTI 532
           LLG M  +G   +  +Y   I
Sbjct: 650 LLGVMEARGCQIHPQTYRMLI 670



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 9/227 (3%)

Query: 356 LIDGFCDAG---------ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +++G+C  G         + + AF +FN +   G   + V+Y  LI    + G      +
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + ++M E    P+  TYT+++ +   S    +A  ++S M++ G  P+++TY V+I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +  ++E  ++ + M E  L P+   YN +I GYCKEG    A  +L  M+     PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +Y+  I   C+      A  LL++ML+  L PSV  YN L   +  I
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKI 227


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 209/395 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G C  G+L KA ++++ ++  G  PN   Y S+I   CK G    A+ + 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++    ++     YT LI G FK G  +   +++++M    +SP   TY  LI  +   
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E   LF EM  R +  + VTY TLI   CK   +  A  L ++M   G++PN++TY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  GE D A  L ++++  G   +V  YN ++    KAGN + A  L++EME 
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            GI P  +TYT +ID++ R  D++KA ++   M   G  P V T+ VL++G CM G +++
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +L   M E  + P+ + YN ++  +C   +     ++   M  +G+ P+  +Y+  I 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
             C+     EA  L  +M++ G  P+V+ YN L +
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIK 686



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 210/390 (53%), Gaps = 2/390 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F I  +   E G L++A ++L++L   G    V    + +     N   E  +M  +  
Sbjct: 192 AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--EGIEMAIKVF 249

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G+     +Y ++I  L + G  K+      +M     +P + +Y+ +I  YC+ G++
Sbjct: 250 CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGEL 309

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  KL D+M+ + +  N  TYN++I  LCK  +  EAE++L +M    I P+ + Y  L
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GF   G    A + F+++ S   SP  +TY  LI+ F + G      +L  EM  RG+
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P EVTYT LID + ++ +M  AF +++ M + G +P++ TYG LI GLC  G +  A++
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L + M +  L+ N  +YN M+ G CK GN  +A++L+ EM   G+ P+  +Y++ I   C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + G   +A  LL +ML  GL+P+V  +N+L
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 230/459 (50%), Gaps = 6/459 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+   SS P   S  Y ++ID +       +AL     M   G++P   T+NS+++ +
Sbjct: 281 LMQMDFRSSTPDVVS--YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 152 IK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K   SF+   +       K+  D   +  LI G  + G +  A +  +++     SP+ 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           + YT+LI G  + G +   + LF ++   GL   + TYT LI    K G   + F  + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G++P++ TY  LI   C  G++    +L DEMR + +  NV  YN+++ G+CK   
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +++A +L+ +M++AGI P+ ITY  +ID +C  G+ DKA +L  ++   G  P+VVT+NV
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  F   G  +    L+  M E+GI P  +TY  L+      + M    ++Y  M+  G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +PD  TY +LI G C   N+KEA  L+  M E    P    YN +I  + K+     A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            L  EM   GLV +   Y+  + +  ++G   + E+ LN
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEG---DVEITLN 734



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 208/399 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  +  S+ I+I   C  G + +A  +L Q++    +P+VV Y+++IDG C  G++++A 
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L   +   GL   ++TY  +I  L K G   +  +   +M    + P    Y  LIH +
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G V    K FDEM  ++++ + +TY TLI G  +  +V E + L  +M   G+ P+ 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  LID +C AGE   AF L N++   G +P++VTY  LI    K G    A++L+ E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++G+  +   Y  +++   ++ ++E+A ++   M+ +G  PD  TY  +I   C  G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A KL   M +  L+P  V +N+++ G+C  G      RLLG M EKG+VP+  +Y++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   C          +  +M   G+ P  + YNIL + 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 275/546 (50%), Gaps = 18/546 (3%)

Query: 20  MAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
           + K P L AF+  N    + L    Q ++I +   +SK+SS    +   L+ +++S R  
Sbjct: 82  LVKTPDL-AFNFVNHIDLRCLDFQTQCLAIAV---VSKLSSPK--SVTQLLKEVVSTRKN 135

Query: 80  SSSFTPRSLLCHLTQLFPSSSNPVTKSR-LYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           S     R L     +L  +     TKS  L++ ++  + + R+ D+A+  F+ M + G  
Sbjct: 136 SV----RDLF---DELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFD 188

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P++ T N +L  + +    +  W+F+++  R +++ +VY+F I+I   C+ G L KA   
Sbjct: 189 PKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 248

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  +E  G  P +V Y +L+ G    G IE A+M+  ++   G      TY  ++  +  
Sbjct: 249 LGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCN 308

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G      E   +M+  G+ P   +YN LI    N G +   F   DEM  + +     T
Sbjct: 309 EGRAS---EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYT 365

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YNTLI GL  E +++ AE L+ +++  GI  + +TYN +I+G+C  G+  KAF L +++ 
Sbjct: 366 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM 425

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           ++G  P+  TY  LI    +   ++ A +L  ++  +G+ P  V    L+D    + +M+
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +AF +   M +    PD  TY  L+ GLC +G  +EA +L   M    ++P+ + YN +I
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY K+G++  A  +  EM   G  P + +Y++ +  L ++     AE LL +M   G+ 
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605

Query: 558 PSVSLY 563
           P+ S +
Sbjct: 606 PNDSSF 611



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 218/436 (50%), Gaps = 15/436 (3%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           Q+L   V  R N+   L         FD+  L  + +R + +  +  F  +++  C+   
Sbjct: 124 QLLKEVVSTRKNSVRDL---------FDE--LVLAHDRLQTKSTIL-FDFMVRFYCQLRM 171

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++A E    ++E GF P       ++    +   IE A + +  +  + + +  +T+ +
Sbjct: 172 VDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 231

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L K G  K    F   M+  G+ P++ TYN L+  Y   G++     +  EM+ + 
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              ++ TYN ++  +C E R  E   +L +MK  G+ P+ ++YN LI G  + G+ + AF
Sbjct: 292 FQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAF 348

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
              +++   G  P+  TYN LI         + A  L+RE+ E+GI    VTY I+I+ +
Sbjct: 349 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGY 408

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +  D +KAF ++  M   G  P  +TY  LI+ LC +   +EA +LF  +    ++P+ 
Sbjct: 409 CQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDL 468

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V+ N ++ G+C  GN  RA  LL EM+   + P+  +Y+  +  LC +GK+ EA  L+ +
Sbjct: 469 VMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGE 528

Query: 551 MLKLGLKPSVSLYNIL 566
           M + G+KP    YN L
Sbjct: 529 MKRRGIKPDHISYNTL 544



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 183/371 (49%), Gaps = 4/371 (1%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G++P   T+N+L+         +   +  SE + K  + D+ ++  ++   C  G   +A
Sbjct: 256 GIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RA 312

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            EVL +++ +G  P+ V Y  LI GC  NGD+E A     ++ + G+V T +TY  LI G
Sbjct: 313 SEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHG 372

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           LF     +       +++  G+     TYN +I+ YC  G   + F L DEM    +   
Sbjct: 373 LFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPT 432

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
             TY +LI  LC+  + +EA+ L +++   G+ P+++  N L+DG C  G  D+AF L  
Sbjct: 433 QFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLK 492

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++      P  VTYN L+R     G  + A +L+ EM+ RGI P  ++Y  LI  + +  
Sbjct: 493 EMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 552

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D + AF +   M   GF+P + TY  L+ GL    + + A +L   M    + PND  + 
Sbjct: 553 DTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFC 612

Query: 495 MMIFGYCKEGN 505
            +I    K  N
Sbjct: 613 SVIEAMSKSDN 623



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           Q+ S + ++ ++R + +      A +    M+E+G  P   T   ++    R + +E A+
Sbjct: 152 QTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAW 211

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
             Y+ M +     +VYT+ ++I+ LC +G +K+A      M    ++P  V YN ++ GY
Sbjct: 212 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGY 271

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G    A  ++ EM  KG  P++ +Y+  +  +C +G+  E   +L +M  +GL P  
Sbjct: 272 SLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDS 328

Query: 561 SLYNILYRAKNN 572
             YNIL R  +N
Sbjct: 329 VSYNILIRGCSN 340


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 209/377 (55%), Gaps = 4/377 (1%)

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W F+ E   C    DV  F +L+   C+   +N+A  +  ++ + G  P VV + +LI+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK+G++++   L R + E  +     TY+VLI GL K G   D  + + +M   G+ P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  T+  LI+ +C  G+   G +++ +M  + V  +V+TYNTLI GLCK   ++EA++L+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ P+  TY  LIDG C  G+ + A  +  ++   G     V +  LI  F + 
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A   +REM E GI P + TYT++I  F +  D++  F++   MQ  G  P V TY
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTY 508

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            VL++GLC +G MK A+ L ++M    + P+D+ YN+++ G+CK GN     +L    +E
Sbjct: 509 NVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSE 565

Query: 519 KGLVPNIASYSSTIGVL 535
           KGLV +  SY+S IG L
Sbjct: 566 KGLVQDYGSYTSLIGDL 582



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 209/431 (48%), Gaps = 42/431 (9%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRC-------KVELDVYSFGILIKGCCEAGDLNKAF 195
           T  S L+F +   ++     F    +C        +++  +S G L     +    + A+
Sbjct: 151 THQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAW 210

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
               ++ + G+ P+V  +  L+   CK   I  A++LF +IG+ GL              
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL-------------- 256

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
                                 P++ ++N LI+ YC  G + +GF+L   M    V  +V
Sbjct: 257 ---------------------RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDV 295

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+ LI GLCKE ++ +A +L  +M   G+ PN +T+  LI+G C  G  D    ++ Q
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G  P V+TYN LI    K G+ + A  LV EM +RG+ P + TYT+LID   +  D
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A E+   M K G   D   +  LI G C +G + EA +    M E  ++P+D  Y M
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G+CK+G+     +LL EM   G VP + +Y+  +  LC+ G+   A +LL+ ML LG
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 556 LKPSVSLYNIL 566
           + P    YNIL
Sbjct: 536 VVPDDITYNIL 546



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 35/335 (10%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F   ++  G   S   ++ L++ Y + G  S+  + F  +R   +     +   L   L 
Sbjct: 142 FTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLM 201

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K      A    +++   G  P+V  +N L+   C   + ++A  LF ++   G  P+VV
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVV 261

Query: 387 TYNVLIRAFSKAGNSKM-----------------------------------ASDLVREM 411
           ++N LI  + K+GN                                      A+ L  EM
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+ P++VT+T LI+    +   +   E+Y  M + G  PDV TY  LI+GLC  G++
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           +EA KL   M +  L+P+   Y M+I G CKEG+   AL +  EM ++G+  +  ++++ 
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I   C++G+  EAE  L +ML+ G+KP  + Y ++
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S+ G +  +S     +E RG   S + +++L++++  S     A + + L++K       
Sbjct: 131 SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF 190

Query: 456 YTYGVLIHGLCMKGNMKE-ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           ++ G L   L MK N+   A   +  + +    P+   +N+++   CKE     A  L G
Sbjct: 191 HSCGYLFDRL-MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFG 249

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           E+ ++GL P + S+++ I   C+ G   +   L   M++  + P V  Y++L
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVL 301


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 232/476 (48%), Gaps = 11/476 (2%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+F S   P   +  + ++I+   K     +A+  F+++    + P + T+ SL++   +
Sbjct: 187 QIFSSGVKPSLLT--FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCR 244

Query: 154 SCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           +   DK +  F    ++ C      YS   LI G C  G + +A ++L ++ E G  P V
Sbjct: 245 NRKLDKAFEVFDRMVKDGCNPNSVTYS--TLINGLCNEGRIGEAMDMLEEMTEKGIEPTV 302

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             YT  I   C  G ++ A  L R +G+ G   +  TYT +I GLF+ G  +     Y K
Sbjct: 303 YTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHK 362

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G+ P+  TYN LI+E C EG+     K+FD M       N  TYN +I GL     
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +++A  + ++M   G SP V+TYN LI      G  + A R    +K +   P   TY  
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F K G    A+    EM + GI+P++ TYT +ID + +   ++ A  ++  M+++G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            S  + TY  +I GL       EA K    M E  L+PN + Y  +I G CK   +  A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++  EM +K  +PN  +Y+S I  LCQ+GK   AE L       G +P++  Y+ L
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTL 654



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 227/480 (47%), Gaps = 32/480 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +II    ++   + A+  +H+ML  G+ P + T+N+L+  +     F      F    
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               L +  ++  +IKG     D+ KA  V N++ + G SP VV Y +LI    K G + 
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      + E      + TY  LI G  K G       F+ +M   G+SP+ +TY  +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC EGK+     LF+ M     + ++ TYN +I GL K  R  EAE+   +M   G+ 
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQ-------------------------------L 376
           PN ITY  LI+G C    T+ AF++F++                               L
Sbjct: 580 PNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL 639

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             NG  P++ TY+ L+    + G S  AS LV  M+E+G++PS   Y  L+ +  +S  +
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A E+++LM   GF P ++ Y VLI  LC     +EA  +F S+ + +   + +V+ ++
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G  +EG+S   ++ L  M  +   P++ +Y      L + GK    + + N++ ++ L
Sbjct: 760 VDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSL 819



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 197/427 (46%), Gaps = 35/427 (8%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +YSF  L+    +   +  A  V  Q+   G  P+++ + ++I+  CK G ++ A ++F 
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +  L     TYT LI G  +N      FE +++M  +G +P+  TY+ LI+  CNEG
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ E   + +EM  + +   V TY   I  LC   RV +A  L+  M   G SP+V TY 
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I G   AG+ + A  +++++   G  P+ VTYN LI      G   +A  +   ME  
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH 401

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV-------------- 460
           G   +  TY  +I      DD+EKA  +++ M K G SP V TY                
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461

Query: 461 ---------------------LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                                LI G C  G +  A+  F  M +  + PN   Y  MI G
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YCKEG    AL L   M E G   +I +Y++ I  L +  ++ EAE    +M + GL+P+
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN 581

Query: 560 VSLYNIL 566
              Y  L
Sbjct: 582 TITYTSL 588



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 188/416 (45%), Gaps = 39/416 (9%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG--ELGLVA-TQ 245
           D+     +LN+L ++   +P   +   +I  C    +++R       I   + GL   T 
Sbjct: 103 DMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTL 162

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +++  L+  L K  +       Y ++  +GV PSL T+N +I+  C +GKV E   +F++
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +   ++  +  TY +LI G C+  ++ +A  + D+M   G +PN +TY+ LI+G C+ G 
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  +  ++   G  P+V TY V I +    G    A +LVR M ++G +PS  TYT 
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG---------------- 469
           +I    R+  ME A  MY  M K G  P+  TY  LI+ LC +G                
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402

Query: 470 -------------------NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                              ++++A  +FN M +    P  V YN +I    K G    A 
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           R L  M E    P+  +Y   I   C+ GK   A     +MLK G+ P+   Y  +
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAM 518


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 238/482 (49%), Gaps = 13/482 (2%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           +C+  + F S S        Y  I+   L S   D A+  F  M+ S   P    FN LL
Sbjct: 39  MCYWGRAFSSGSGD------YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLL 92

Query: 149 IFVIKSCSFDKGWLFFS----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
             + K   FD   L  S      R  +  ++Y++ ILI   C    ++ A  +L ++ ++
Sbjct: 93  SAIAKMKKFD---LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G+ P++V  +SL++G C    I  A  L  ++ E+G      T+T LI GLF +    + 
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               ++M   G  P+L TY  +++  C  G +   F L ++M   ++  NVV Y+T+I  
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK     +A  L  +M+  G+ PNVITY+ LI   C+      A RL + +     +P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVT+N LI AF K G    A  L  EM +R I P   TY+ LI+ F   D +++A  M+ 
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           LM      P+V TY  LI+G C    + E  +LF  M +  L  N V Y  +I G+ +  
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   A  +  +M   G+ PNI +Y++ +  LC++GK  +A V+   + +  ++P++  YN
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509

Query: 565 IL 566
           I+
Sbjct: 510 IM 511



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 206/386 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  PN+V Y  +++G CK GDI+ A  L 
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    Y+ +I  L K   + D    + +M+  GV P++ TY+ LI   CN 
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            + S+  +L  +M  R++  NVVT+N LI    KE ++ EAE+L D+M    I P++ TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + LI+GFC     D+A  +F  + S    P+VVTYN LI  F KA       +L REM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  + VTYT LI  F ++ D + A  ++  M   G  P++ TY  L+ GLC  G +++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  +  +K+EP    YN+MI G CK G       L   ++ KG+ P++  Y++ I 
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPS 559
             C+ G   EA+ L  +M + G  P 
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 221/407 (54%), Gaps = 4/407 (0%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYS 177
           R+SD A+    QM++ G RP + TF +L+  +F+    S     +     R   + ++ +
Sbjct: 170 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVT 227

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G+++ G C+ GD++ AF +LN++E      NVVIY+++ID  CK    + A  LF ++ 
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     TY+ LI  L       D       M    ++P++ T+N LI  +  EGK+ 
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KL+DEM  R +  ++ TY++LI G C   R+ EA+ + + M      PNV+TYN LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           +GFC A   D+   LF ++   G   + VTY  LI  F +A +   A  + ++M   G+ 
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ +TY  L+D   ++  +EKA  ++  +Q+S   P +YTY ++I G+C  G +++   L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           F S+    ++P+ ++YN MI G+C++G    A  L  +M E G +P+
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 159/319 (49%), Gaps = 7/319 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y ++ID+  K R  D AL  F +M + GVRP   T++SL+  +   C++    D   L 
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL---CNYERWSDASRLL 318

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  +V +F  LI    + G L +A ++ +++ +    P++  Y+SLI+G C +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ AK +F  +          TY  LI G  K     +G E + +M   G+  +  TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LIH +           +F +M    V  N++TYNTL+ GLCK  ++++A  + + ++ 
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + + P + TYN +I+G C AG+ +  + LF  L   G  P V+ YN +I  F + G  + 
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558

Query: 404 ASDLVREMEERGITPSEVT 422
           A  L R+M E G  P   T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 139/275 (50%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF  M       ++  +N L+  + K  +      L ++M+  GIS N+ TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+ FC   +   A  L  ++   G  PS+VT + L+  +        A  LV +M E 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  +T+T LI      +   +A  +   M + G  P++ TYGV+++GLC +G++  A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L N M   K+E N V+Y+ +I   CK  +   AL L  EM  KG+ PN+ +YSS I  
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC   +W +A  LL+ M++  + P+V  +N L  A
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 215/407 (52%), Gaps = 11/407 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V +F  L+ G C  G + +A  +++++ E G  P+ V Y ++++G CK GD   A  + 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           RK+ E  + A    Y+ ++  L K+G        + +M   G+ P++ TYNC+I  YC+ 
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK S+  +L  +M  R +  +VVT++ LI    KE +V  AE L  +M    I P  ITY
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV-----------LIRAFSKAGNSK 402
           + +IDGFC     + A  +F+ + S G SP ++T N            LI  F + GN  
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVN 248

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           +A DL +EM   G++P  VT   L+     +  +EKA EM+ + QKS    D  T  ++I
Sbjct: 249 VAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIII 308

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +G+C    + EA  LFNS+    +E + V YN++I  + KEGN  RA  +  EM  KG++
Sbjct: 309 NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+  +Y+S +   C+  +  EA  +++ M+  G  P V  ++ L + 
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 231/457 (50%), Gaps = 12/457 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I++   K   +  AL    +M +S ++     +++++  + K  +  K    F+E  
Sbjct: 48  YGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMH 107

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  +V ++  +I G C  G  + A ++L  + E    P+VV +++LI+   K G + 
Sbjct: 108 EKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVS 167

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L+R++    +  T  TY+ +I G  K+   +D    ++ M   G SP + T N LI
Sbjct: 168 GAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLI 227

Query: 288 -----------HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                      H +C  G V+    LF EM    V+ ++VT NTL+ GLC+  ++++A  
Sbjct: 228 DGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALE 287

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +    + + +  +  T N +I+G C   + D+A+ LFN L  NG    VVTYN+LI  F 
Sbjct: 288 MFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFV 347

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K GN   A D+  EM  +GI PS VTY  ++D F + + +E+A +M   M   G SPDV 
Sbjct: 348 KEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVV 407

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T+  LI G C  G + +  +LF+ M +  L  + + YN +I G+CK G+   A  +  EM
Sbjct: 408 TFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEM 467

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
              G+ P+  ++ S +  LC   +  +   +L  + K
Sbjct: 468 VSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 162/340 (47%), Gaps = 11/340 (3%)

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G  A   T+T L+ GL + G         ++M   G  P   TY  +++  C  G   
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               +  +M   ++  NVV Y+ ++  LCK+    +A+ +  +M   GI PNV+TYN +I
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           DG+C  G+   A +L   +      P VVT++ LI AF K G    A +L REM  R I 
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV-----------LIHGLC 466
           P+ +TY+ +ID F +   +E A  M+ LM   G SPD+ T              LIHG C
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             GN+  A  LF  M    + P+ V  N ++ G C+ G   +AL +     +  +  + A
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +  I  +C+  K  EA  L N +   G++  V  YNIL
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 183/375 (48%), Gaps = 34/375 (9%)

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
           G+++ +    R +L     +FP++         Y S+ID   K SRL D A   F  M+ 
Sbjct: 164 GKVSGAEELYREML--RRNIFPTTIT-------YSSMIDGFCKHSRLED-AKHMFDLMVS 213

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
            G  P   T N+L    I  C             C+ +        LI G C+ G++N A
Sbjct: 214 KGCSPDIITLNTL----IDGC-------------CRAKRH------LIHGFCQVGNVNVA 250

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++  ++   G SP++V   +L+ G C+NG +E+A  +F+   +  +     T  ++I G
Sbjct: 251 QDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIING 310

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + K     + ++ +  + +NGV   + TYN LI  +  EG       ++ EM  + +  +
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            VTYN+++ G CK+ R++EA +++D M   G SP+V+T++ LI G+C AG  D    LF+
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++   G     +TYN LI  F K G+   A D+  EM   G+ P  +T+  ++       
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490

Query: 435 DMEKAFEMYSLMQKS 449
           +++K   M   +QKS
Sbjct: 491 ELQKGLTMLEDLQKS 505



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 4/237 (1%)

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G   NV+T+  L++G C  G   +A  L +++   G  P  VTY  ++    K G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +  A +++R+M+E  I  + V Y+ ++D   +  +  KA  +++ M + G  P+V TY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G C  G   +A +L   M E  ++P+ V ++ +I  + KEG    A  L  EM  + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY----RAKNNI 573
           + P   +YSS I   C+  +  +A+ + + M+  G  P +   N L     RAK ++
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%)

Query: 174  DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            DV S+  ++ G C  G+L+K ++++  ++  G  PN  IY S+I   C+   +  A+  F
Sbjct: 723  DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782

Query: 234  RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             ++   G++     YT LI G  K G  +   +F+ +M    ++P + TY  +I  +C  
Sbjct: 783  SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842

Query: 294  GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            G + E  KLF EM  + +  + VT+  LI G CK   +++A R+ + M  AG SPNV+TY
Sbjct: 843  GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902

Query: 354  NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              LIDG C  G+ D A  L +++   G  P++ TYN ++    K+GN + A  LV E E 
Sbjct: 903  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962

Query: 414  RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             G+    VTYT L+D++ +S +M+KA E+   M   G  P + T+ VL++G C+ G +++
Sbjct: 963  AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022

Query: 474  ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
              KL N M    + PN   +N ++  YC   N   A  +  +M  +G+ P+  +Y + + 
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082

Query: 534  VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              C+     EA  L  +M   G   SVS Y++L + 
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 1/436 (0%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
            G  P   ++++++    +    DK W L     R  ++ + Y +G +I   C    L +A
Sbjct: 719  GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778

Query: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             E  +++   G  P+ V+YT+LIDG CK GDI  A   F ++    +     TYT +I G
Sbjct: 779  EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838

Query: 255  LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
              + G   +  + + +M   G+ P   T+  LI+ YC  G + + F++ + M     + N
Sbjct: 839  FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898

Query: 315  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            VVTY TLI GLCKE  +  A  LL +M   G+ PN+ TYN +++G C +G  ++A +L  
Sbjct: 899  VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958

Query: 375  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + ++ G +   VTY  L+ A+ K+G    A ++++EM  +G+ P+ VT+ +L++ F    
Sbjct: 959  EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018

Query: 435  DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             +E   ++ + M   G +P+  T+  L+   C++ N+K A+ ++  M    + P+   Y 
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078

Query: 495  MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
             ++ G+CK  N   A  L  EM  KG   ++++YS  I    +  K+ EA  + +QM + 
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138

Query: 555  GLKPSVSLYNILYRAK 570
            GL     +++     K
Sbjct: 1139 GLAADKEIFDFFSDTK 1154



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 216/397 (54%), Gaps = 7/397 (1%)

Query: 174  DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV----VIYTSLIDGCCKNGDIERA 229
            D   F +  +   + G L +A  V  ++   G   +V    V  T L   C K      A
Sbjct: 617  DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT---A 673

Query: 230  KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             ++FR+  E+G+     +Y ++I  + + G  K+       M+L G +P + +Y+ +++ 
Sbjct: 674  IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 733

Query: 290  YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            YC  G++ + +KL + M+ + +  N   Y ++I  LC+  ++ EAE    +M   GI P+
Sbjct: 734  YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 793

Query: 350  VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             + Y  LIDGFC  G+   A + F ++ S   +P V+TY  +I  F + G+   A  L  
Sbjct: 794  TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853

Query: 410  EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            EM  +G+ P  VT+T LI+ + ++  M+ AF +++ M ++G SP+V TY  LI GLC +G
Sbjct: 854  EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913

Query: 470  NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            ++  A++L + MW+  L+PN   YN ++ G CK GN   A++L+GE    GL  +  +Y+
Sbjct: 914  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973

Query: 530  STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +   C+ G+  +A+ +L +ML  GL+P++  +N+L
Sbjct: 974  TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
           R+SD A+    QM++ G RP + TF +L+  +F+    S     +     R C+  L   
Sbjct: 170 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 226

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G+++ G C+ GD + A  +LN++E      +VVI+ ++ID  CK   ++ A  LF+++
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI  L   G   D  +    M    ++P+L T+N LI  +  EGK 
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL+D+M  R +  ++ TYN+L+ G C   R+ +A+++ + M      P+V+TYN L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC +   +    LF ++   G     VTY  LI+     G+   A  + ++M   G+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  +TY+IL+D    +  +EKA E++  MQKS    D+Y Y  +I G+C  G + +   
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF S+    ++PN V YN MI G C +     A  LL +M E G +PN  +Y++ I    
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586

Query: 537 QDGKWPEAEVLLNQM 551
           +DG    +  L+ +M
Sbjct: 587 RDGDKAASAELIREM 601



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 211/396 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  PN+V Y  +++G CK GD + A  L 
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    +  +I  L K     D    +++M+  G+ P++ TY+ LI   C+ 
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  +++  N+VT+N LI    KE +  EAE+L D M    I P++ TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L++GFC     DKA ++F  + S    P VVTYN LI+ F K+   +  ++L REM  
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTYT LI       D + A +++  M   G  PD+ TY +L+ GLC  G +++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F+ M +++++ +  +Y  MI G CK G       L   ++ KG+ PN+ +Y++ I 
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC      EA  LL +M + G  P+   YN L RA
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 9/480 (1%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           +C+  + F S S        Y  I+   L     D A+  F  M+ S   P    FN LL
Sbjct: 39  MCYWGRAFSSGSGD------YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLL 92

Query: 149 IFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
             + K   FD   +   E   ++E+   +Y++ ILI   C    ++ A  +L ++ ++G+
Sbjct: 93  SAIAKMKKFDV-VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 151

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P++V  +SL++G C    I  A  L  ++ E+G      T+T LI GLF +    +   
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             ++M   G  P+L TY  +++  C  G       L ++M   ++  +VV +NT+I  LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K   V +A  L  +M+  GI PNV+TY+ LI   C  G    A +L + +     +P++V
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N LI AF K G    A  L  +M +R I P   TY  L++ F   D ++KA +M+  M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                 PDV TY  LI G C    +++ ++LF  M    L  + V Y  +I G   +G+ 
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A ++  +M   G+ P+I +YS  +  LC +GK  +A  + + M K  +K  + +Y  +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           ++ +IID+  K R  D AL  F +M   G+RP   T++SL+  +   CS+    D   L 
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 318

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  ++ +F  LI    + G   +A ++ + + +    P++  Y SL++G C +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +++AK +F  +          TY  LI G  K+   +DG E + +M   G+     TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI    ++G      K+F +M    V  +++TY+ L+ GLC   ++++A  + D M+ 
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  ++  Y  +I+G C AG+ D  + LF  L   G  P+VVTYN +I         + 
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+++M+E G  P+  TY  LI + +R  D   + E+   M+   F  D  T G++ +
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618

Query: 464 GL 465
            L
Sbjct: 619 ML 620



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 142/287 (49%)

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  ++    ++ K+ +   LF  M       ++V +N L+  + K  +      L ++M+
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
              I   + TYN LI+ FC   +   A  L  ++   G  PS+VT + L+  +       
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  LV +M E G  P  +T+T LI      +   +A  +   M + G  P++ TYGV++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +GLC +G+   A  L N M   K+E + V++N +I   CK  +   AL L  EM  KG+ 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           PN+ +YSS I  LC  G+W +A  LL+ M++  + P++  +N L  A
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D    +   ++AL  F  M  S ++     + +++  + K+   D GW LF S +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V ++  +I G C    L +A+ +L +++E G  PN   Y +LI    ++GD  
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            +  L R++     V    T   L+  +  +G
Sbjct: 593 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 623


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 241/466 (51%), Gaps = 6/466 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + +Y+++I A  K    ++ L    +ML  G  P  NTFN  +  + K     +   
Sbjct: 267 VPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAK 326

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  +    + +++G+L+ G C  G +++A  +LN++     +PNVV++ +LI+G  
Sbjct: 327 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYV 382

Query: 222 KNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
             G ++ AK ++   +  +G      TY  LI GL K G      E   +MQ+ G  P++
Sbjct: 383 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +C EG++ E   + DEM  + +A N V YN LI  LCK+ +VQ+A  +   
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI G C   + ++A  L+  +   G   + +TYN LI AF + G 
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV +M  RG    ++TY  LI +  R+ ++EK   ++  M   G +P+  +  +
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+GLC  GN++ A +    M    L P+ V YN +I G CK G +  AL L  ++  +G
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y++ I   C++G + +A +LL++ +  G  P+   + IL
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 2/376 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAG 189
           +L+    P    FN+L+   +     D+      E+   V    D++++  LI G C+ G
Sbjct: 362 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L  A E++N+++  G  PNV+ YT LID  CK G +E A+ +  ++   GL      Y 
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI  L K+   +D    +  M   G  P ++T+N LI   C   K  E   L+ +M   
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  N +TYNTLI    +   +QEA +L++ M   G   + ITYN LI   C AG  +K 
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF  + S G +P+ ++ N+LI    + GN + A + +R+M  RG+TP  VTY  LI+ 
Sbjct: 602 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 661

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++   ++A  ++  +Q  G  PD  TY  LI   C +G   +A  L +   ++   PN
Sbjct: 662 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 721

Query: 490 DVVYNMMIFGYCKEGN 505
           +V + +++  + KEG+
Sbjct: 722 EVTWYILVSNFIKEGD 737



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 193/399 (48%), Gaps = 12/399 (3%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+ G C     N  +E+L++    G SP V  +  ++   C   +++ A  L + +   
Sbjct: 209 VLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 264

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L K G   +  +  E+M L G  P + T+N  IH  C   ++ E 
Sbjct: 265 GCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 324

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R    N  TY  L+ GLC+  +V EA  LL+++     +PNV+ +N LI+G
Sbjct: 325 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLING 380

Query: 360 FCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +   G  D+A  + ++ + S G  P + TYN LI    K G    A +L+ EM+ +G  P
Sbjct: 381 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TYTILID F +   +E+A  +   M   G + +   Y  LI  LC    +++A  +F
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M     +P+   +N +IFG CK      AL L  +M  +G++ N  +Y++ I    + 
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA---KNNIE 574
           G   EA  L+N ML  G       YN L +A     NIE
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 10/417 (2%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSL---LCHLTQLFPS----SSNPVTKSRLYESIIDA 115
           H AA+ +   ++ G  T +SFT   L   LC + ++  +    +  P     L+ ++I+ 
Sbjct: 322 HEAAKLVDRMLLRG-FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLING 380

Query: 116 HLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
           ++     D+A    H+ ML  G  P   T+N+L++ + K           +E + K  E 
Sbjct: 381 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V ++ ILI   C+ G L +A  VL+++   G + N V Y  LI   CK+  ++ A  +F
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G      T+  LI GL K    ++    Y+ M L GV  +  TYN LIH +   
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + E  KL ++M  R    + +TYN LI  LC+   +++   L + M   G++PN I+ 
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 620

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G C  G    A      +   G +P +VTYN LI    K G ++ A +L  +++ 
Sbjct: 621 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            GI P  +TY  LI    +    + A  + S    SGF P+  T+ +L+     +G+
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 195/446 (43%), Gaps = 44/446 (9%)

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           W    +  C +  DVY   +LI     AG+      +L Q+++ G      ++  ++   
Sbjct: 118 WAGTQKGYCHM-FDVYY--MLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHY 174

Query: 221 CKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            + G   +A ++L    G      T  +Y V++  L      K     + +M   G+SP+
Sbjct: 175 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 234

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI----------------- 322
           +YT+  ++   C   +V     L  +M       N + Y TLI                 
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294

Query: 323 ------C------------GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
                 C            GLCK +R+ EA +L+D+M + G +PN  TY  L+ G C  G
Sbjct: 295 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 354

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE-MEERGITPSEVTY 423
           + D+A  L N++     +P+VV +N LI  +   G    A  ++ E M   G  P   TY
Sbjct: 355 KVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 410

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI    +   +  A E+ + MQ  G  P+V TY +LI   C +G ++EA  + + M  
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L  N V YN +I   CK+     AL + G+M+ KG  P+I +++S I  LC+  K+ E
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 530

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  L   ML  G+  +   YN L  A
Sbjct: 531 ALGLYQDMLLEGVIANTITYNTLIHA 556


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 285/551 (51%), Gaps = 17/551 (3%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISI-ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P    S F WA     +  P    + ++ ++ S +S H  A A++L++  I  R + +S 
Sbjct: 55  PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYI--RTSDASL 112

Query: 84  TPRSLLCHLTQLFPSSS-NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           +    LC+ + L P+   +P     L++  + A+L       AL  F +M+   ++P   
Sbjct: 113 S----LCN-SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLL 167

Query: 143 TFNSLLIFVIK---SCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           T N+LLI +++   S S       F +  +  V L+V +F +L+ G C  G L  A  +L
Sbjct: 168 TCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227

Query: 199 NQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            ++  E   +P+ V Y +++    K G +   K L   + + GLV  + TY  L+ G  K
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G  K+ F+  E M+   V P L TYN LI+  CN G + EG +L D M+  ++  +VVT
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347

Query: 318 YNTLICGLCKEMRVQ-EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           YNTLI G C E+ +  EA +L++QM+  G+  N +T+N  +   C   + +   R   +L
Sbjct: 348 YNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406

Query: 377 KS-NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
              +G SP +VTY+ LI+A+ K G+   A +++REM ++GI  + +T   ++D+  +   
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A  + +   K GF  D  TYG LI G   +  +++A ++++ M + K+ P    +N 
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G C  G +  A+    E+ E GL+P+ ++++S I   C++G+  +A    N+ +K  
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 556 LKPSVSLYNIL 566
            KP     NIL
Sbjct: 587 FKPDNYTCNIL 597



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 236/445 (53%), Gaps = 5/445 (1%)

Query: 109 YESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-E 166
           Y +I+ A   K RLSD        M  +G+ P   T+N+L+    K  S  + +      
Sbjct: 243 YNTILKAMSKKGRLSDLKELLL-DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  V  D+ ++ ILI G C AG + +  E+++ ++ +   P+VV Y +LIDGC + G  
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNC 285
             A+ L  ++   G+ A Q T+ + +  L K   ++    +  E + ++G SP + TY+ 
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  Y   G +S   ++  EM  + +  N +T NT++  LCKE ++ EA  LL+     G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              + +TY  LI GF    + +KA  +++++K    +P+V T+N LI      G +++A 
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +   E+ E G+ P + T+  +I  + +   +EKAFE Y+   K  F PD YT  +L++GL
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G  ++A   FN++ E + E + V YN MI  +CK+     A  LL EM EKGL P+ 
Sbjct: 602 CKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQ 550
            +Y+S I +L +DGK  E + LL +
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKK 685



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 32/400 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   +  LS +A     QM + GV+    T N  L ++   C  +K      + +
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL---CKEEKREAVTRKVK 404

Query: 169 CKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             V++     D+ ++  LIK   + GDL+ A E++ ++ + G   N +   +++D  CK 
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ A  L     + G +  + TY  LI G F+    +   E +++M+   ++P++ T+
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI   C+ GK     + FDE+    +  +  T+N++I G CKE RV++A    ++   
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
               P+  T N L++G C  G T+KA   FN L    +    VTYN +I AF K    K 
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKE 643

Query: 404 ASDLVREMEERGITPSEVTYTILID------SFVRSDDMEKAFE-----MYSLMQ----- 447
           A DL+ EMEE+G+ P   TY   I           +D++ K F      M   +Q     
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEK 703

Query: 448 -------KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
                  K   + +   Y  +I  LC +G +KE S+ + S
Sbjct: 704 NPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 165/332 (49%), Gaps = 40/332 (12%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---EMRVQEA 334
           PS   ++  +  Y +EGK     ++F +M   ++  N++T NTL+ GL +      +  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIR 393
             + D M   G+S NV T+N L++G+C  G+ + A  +  ++ S  + +P  VTYN +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A SK G      +L+ +M++ G+ P+ VTY  L+  + +   +++AF++  LM+++   P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY +LI+GLC  G+M+E  +L ++M   KL+P+ V YN +I G  + G S  A +L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 514 GEMNEKGL------------------------------------VPNIASYSSTIGVLCQ 537
            +M   G+                                     P+I +Y + I    +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G    A  ++ +M + G+K +    N +  A
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDA 460


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 202/391 (51%), Gaps = 3/391 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+     LI+G C  G   KA ++L  LE  G  P+V+ Y  +I G CK G+I  A  + 
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +   + +     TY  ++  L  +G  K   E  ++M      P + TY  LI   C +
Sbjct: 196 DR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V    KL DEMR R    +VVTYN L+ G+CKE R+ EA + L+ M  +G  PNVIT+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A +L   +   G SPSVVT+N+LI    + G    A D++ +M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P+ ++Y  L+  F +   M++A E    M   G  PD+ TY  ++  LC  G +++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ N +      P  + YN +I G  K G + +A++LL EM  K L P+  +YSS +G
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L ++GK  EA    ++  ++G++P+   +N
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 216/422 (51%), Gaps = 2/422 (0%)

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           SG  P   T+N ++    K+   +        +R  V  DV ++  +++  C++G L +A
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVL--DRMSVSPDVVTYNTILRSLCDSGKLKQA 223

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            EVL+++ +    P+V+ YT LI+  C++  +  A  L  ++ + G      TY VL+ G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + K G   +  +F   M  +G  P++ T+N ++   C+ G+  +  KL  +M  +  + +
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+N LI  LC++  +  A  +L++M   G  PN ++YN L+ GFC   + D+A     
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ S G  P +VTYN ++ A  K G  + A +++ ++  +G +P  +TY  +ID   ++ 
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
              KA ++   M+     PD  TY  L+ GL  +G + EA K F+      + PN V +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ G CK   + RA+  L  M  +G  PN  SY+  I  L  +G   EA  LLN++   
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583

Query: 555 GL 556
           GL
Sbjct: 584 GL 585



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 200/379 (52%), Gaps = 3/379 (0%)

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G+L + F+ L  +   G  P+++  T+LI G C+ G   +A  +   +   G V    T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y V+I G  K G   +     ++M    VSP + TYN ++   C+ GK+ +  ++ D M 
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R+   +V+TY  LI   C++  V  A +LLD+M+  G +P+V+TYN L++G C  G  D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A +  N + S+G  P+V+T+N+++R+    G    A  L+ +M  +G +PS VT+ ILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   R   + +A ++   M + G  P+  +Y  L+HG C +  M  A +    M      
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V YN M+   CK+G    A+ +L +++ KG  P + +Y++ I  L + GK  +A  L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L++M    LKP    Y+ L
Sbjct: 472 LDEMRAKDLKPDTITYSSL 490



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++ ++I G C+AG++N A  VL++   M  SP+VV Y +++   C +G +++A  + 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ +        TYT+LI    ++       +  ++M+  G +P + TYN L++  C E
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E  K  ++M       NV+T+N ++  +C   R  +AE+LL  M   G SP+V+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+  C  G   +A  +  ++  +G  P+ ++YN L+  F K      A + +  M  
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  P  VTY  ++ +  +   +E A E+ + +   G SP + TY  +I GL   G   +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KL + M    L+P+ + Y+ ++ G  +EG    A++   E    G+ PN  +++S + 
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +   A   L  M+  G KP+ + Y IL
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 200/417 (47%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  +I  + K+   + AL    +M    V P   T+N++L  +  S    +         
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C    DV ++ ILI+  C    +  A ++L+++ + G +P+VV Y  L++G CK G 
Sbjct: 232 QRDCYP--DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A      +   G      T+ +++  +   G   D  +    M   G SPS+ T+N 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+  C +G +     + ++M       N ++YN L+ G CKE ++  A   L++M   G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+++TYN ++   C  G+ + A  + NQL S G SP ++TYN +I   +KAG +  A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ EM  + + P  +TY+ L+    R   +++A + +   ++ G  P+  T+  ++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C       A      M     +PN+  Y ++I G   EG +  AL LL E+  KGL+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 38/347 (10%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + + G  ++GF+F E M  +G  P +     LI  +C  GK  +  K+ + +       +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V+TYN +I G CK   +  A  +LD+M    +SP+V+TYN ++   CD+G+  +A  + +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++      P V+TY +LI A  +      A  L+ EM +RG TP  VTY +L++   +  
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 435 DMEKAF-----------------------------------EMYSLMQKSGFSPDVYTYG 459
            +++A                                    ++ + M + GFSP V T+ 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +LI+ LC KG +  A  +   M +   +PN + YN ++ G+CKE    RA+  L  M  +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G  P+I +Y++ +  LC+DGK  +A  +LNQ+   G  P +  YN +
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 158/280 (56%), Gaps = 3/280 (1%)

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           + +    G++ EGFK  + M +     +++   TLI G C+  + ++A ++L+ ++ +G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+VITYN +I G+C AGE + A  + +++     SP VVTYN ++R+   +G  K A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++  M +R   P  +TYTILI++  R   +  A ++   M+  G +PDV TY VL++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G + EA K  N M  +  +PN + +N+++   C  G    A +LL +M  KG  P++ 
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +++  I  LC+ G    A  +L +M + G +P+   YN L
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 32/216 (14%)

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           V  N  +R   + G  +     +  M   G  P  +  T LI  F R     KA ++  +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 446 MQKSGFSPDVYTYGVLIHG--------------------------------LCMKGNMKE 473
           ++ SG  PDV TY V+I G                                LC  G +K+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++ + M +    P+ + Y ++I   C++     A++LL EM ++G  P++ +Y+  + 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +C++G+  EA   LN M   G +P+V  +NI+ R+
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 3/152 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL     +PV  +  Y ++ID   K+  + +A+    +M    ++P + T++SL+  +
Sbjct: 437 LNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            +    D+   FF E  R  +  +  +F  ++ G C++   ++A + L  +   G  PN 
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
             YT LI+G    G  + A  L  ++   GL+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 217/405 (53%), Gaps = 3/405 (0%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           ++VY +  +I G C+ G+L++A +VL +++  G SP+V  Y+ LI G CK GD+E+   L
Sbjct: 323 VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL 382

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             ++    +  +  +Y+ L  GL K  L     + +  +   G       Y+ LI  +C 
Sbjct: 383 IEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCM 442

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +G +    KL +EM    +A +   + +L+ G CK      A    + M   GI P++ T
Sbjct: 443 QGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            N +ID  C  G  ++A  L N++++ G  P++ TYN +I    K   S+ A +L   M 
Sbjct: 503 CNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLML 562

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           +R + PS V Y+ LID F +  + +KA  +Y+ M K G +PD+  Y +LI+ LC +  M 
Sbjct: 563 KRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMC 622

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  LF  M E  + P+ + Y  +I G+C+ G+  +A  L  EM ++G +P + +Y+S +
Sbjct: 623 EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLV 682

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
              C+  +   A++L+++M + G+ P V  YN+L   +R + N++
Sbjct: 683 DGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLD 727



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 219/424 (51%), Gaps = 1/424 (0%)

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +N+++  + K    D+      E + C +  DVY++ ILI G C+ GD+ K   ++ +++
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
                P++V Y+SL  G CK    + +  +FR +G  G    Q  Y++LI G    G   
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              +  E+M  N ++P    +  L+H +C  G      + F+ M    +  ++ T N +I
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C+E RV+EA  L+++M+  GI PN+ TYN +I+  C   ++++A  LF  +      
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVL 567

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           PSVV Y+ LI  F+K  NS+ A  L   M + G+TP  V YTILI+       M +A+ +
Sbjct: 568 PSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNL 627

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M ++G +PD  +Y  +I G C  G+M++A  LFN M +    P  V Y  ++ GYCK
Sbjct: 628 FKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK 687

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                 A  L+ EM  KG+ P++ +Y+  I    + G   +A  +LN+M + G+ P    
Sbjct: 688 MNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMT 747

Query: 563 YNIL 566
           Y +L
Sbjct: 748 YMML 751



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 193/405 (47%), Gaps = 29/405 (7%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +F    +  +EL   S   L+K   EA        +  +++  G  PNV  YT +++  C
Sbjct: 201 VFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC 260

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K              GE  +   Q T                  E  E+M+ NG SP++ 
Sbjct: 261 KGN-----------FGEADIDTRQAT------------------EILEEMERNGESPTVV 291

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY+  I+  C  G V         +       NV  YN +I GLCK+  + EA ++L++M
Sbjct: 292 TYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM 351

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K  GISP+V TY+ LI GFC  G+ +K   L  ++K +   PS+V+Y+ L     K   S
Sbjct: 352 KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLS 411

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            ++ D+ R++   G    +  Y+ILI  F    D++ A ++   M ++  +PD   +  L
Sbjct: 412 DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           +HG C  G    A + FN M E  + P+    N++I  +C+EG    AL L+ EM  +G+
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            PN+ +Y++ I  LC++ K   A  L   MLK  + PSV +Y+ L
Sbjct: 532 FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 6/329 (1%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            + +LI     N + ++  + + + +  G+  S  + N L+       +      LF+EM
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEM 240

Query: 307 RHREVACNVVTYNTLICGLCK------EMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +      NV TY  ++   CK      ++  ++A  +L++M+  G SP V+TY+  I G 
Sbjct: 241 KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G  + A      L S     +V  YN +I    K G    A  ++ EM+  GI+P  
Sbjct: 301 CRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDV 360

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY+ILI  F +  D+EK   +   M+ S   P + +Y  L HGLC K     +  +F  
Sbjct: 361 YTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRD 420

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           +     + +   Y+++I G+C +G+   A +L+ EM    L P+ +++ S +   C+ G 
Sbjct: 421 LGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGL 480

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           W  A    N ML+ G+ PS++  N++  A
Sbjct: 481 WVNALEFFNMMLEGGILPSIATCNVIIDA 509


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 226/426 (53%), Gaps = 3/426 (0%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           V P   T+N+L+  + K     +   +     N+  +  D +++  +I G C++G L +A
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP-DDFTYNTIIDGYCKSGMLQEA 334

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            E+L      GF P+ V Y SLI+G C  GDIERA  LF +     L      Y  L+ G
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L + GL     +   +M   G  P ++TYN +I+  C  G +S+   + ++   +    +
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V T+NTLI G CK +++  A +L+++M   GI+P+VITYN +++G C AG+  +    F 
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++   G  P+ +TYN+LI  F K    + AS ++  M + G+ P  V++  LI  F R+ 
Sbjct: 515 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           D++ A+ ++  + + G+S    T+ +LI     K NM+ A K+F  M     +P+   Y 
Sbjct: 575 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYR 634

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           +++ G CK  N  RA   L EM  KG VP++A++   + +L  + +  EA  +++ M+++
Sbjct: 635 ILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRM 694

Query: 555 GLKPSV 560
           G+ P V
Sbjct: 695 GVVPEV 700



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 243/513 (47%), Gaps = 11/513 (2%)

Query: 56  SKMSSHSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIID 114
           S++++ +  A + LI +++S GR+        S   HL    P S  P     LY + I 
Sbjct: 28  SELTASTIPAYRALIRELVSAGRLDDVDAALASARSHLA---PDSLQP-----LYVASIQ 79

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVEL 173
           A+ ++     A+  F +M      P +  +N+++  ++ +   D+   ++       V  
Sbjct: 80  AYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAP 139

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +  + +K  C  G  + A  +L  L E G       Y +++ G   +G    A+ LF
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++    +     T+  ++  L + G   +      K+   G+S + +T N  I   C +
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E   L + M    VA +VVTYNTL+ GLCK+ +VQEA + L +M   G  P+  TY
Sbjct: 260 GRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTY 318

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N +IDG+C +G   +A  L       G  P  VTY  LI      G+ + A +L  E + 
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + + P  V Y  L+    R   +  A ++ + M + G  PD++TY ++I+GLC  GN+ +
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A+ + N        P+   +N +I GYCK      AL+L+  M   G+ P++ +Y+S + 
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+ GK  E      +M+  G +P+   YNIL
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 238/505 (47%), Gaps = 40/505 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL------------IFVIKS-- 154
           Y +I+DA + +   DQA   + +ML +GV P + T    L            + +++S  
Sbjct: 109 YNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLS 168

Query: 155 -----------CSFDKGWL----------FFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
                      C+  +G             F E   + V  DV +F  ++   C+ GD+ 
Sbjct: 169 ERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVM 228

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           ++  +L ++ + G S N       I G C++G +E A  L  ++G   +     TY  L+
Sbjct: 229 ESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLM 287

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K+   ++  ++  +M   G  P  +TYN +I  YC  G + E  +L  +   +   
Sbjct: 288 RGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFV 347

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTY +LI GLC E  ++ A  L ++ +   + P+++ YN L+ G C  G    A ++
Sbjct: 348 PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N++   G  P + TYN++I    K GN   A+ ++ +   +G  P   T+  LID + +
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ A ++   M   G +PDV TY  +++GLC  G  KE ++ F  M      PN + 
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I  +CK      A  ++  M + GLVP+  S+++ I   C++G    A +L  ++ 
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587

Query: 553 KLGLKPSVSLYNIL---YRAKNNIE 574
           + G   +   +NIL   Y +K N++
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQ 612



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 196/384 (51%), Gaps = 1/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID + KS +  +A       +  G  P   T+ SL+  +      ++    F+E +
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+  +  L+KG C  G +  A +V+N++ E G  P++  Y  +I+G CK G+I 
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++       G +    T+  LI G  K        +  E+M   G++P + TYN ++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK  E  + F+EM  +    N +TYN LI   CK  +++EA  ++ +M   G+ 
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +++N LI GFC  G+ D A+ LF +L   G S +  T+N+LI A+S   N +MA  +
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G  P   TY IL+D   ++ ++++A+   + M   GF P + T+G +++ L M
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677

Query: 468 KGNMKEASKLFNSMWETKLEPNDV 491
              + EA  + + M    + P  V
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 5/326 (1%)

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q  Y   I    + G  +   + +E+M L    P+   YN ++    N     +  K++ 
Sbjct: 71  QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYV 130

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M    VA +  T+   +   C   R   A RLL  +   G       Y  ++ G    G
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
               A  LF+++      P V T+N ++ A  + G+   +  L+ ++ +RG++ ++ T  
Sbjct: 191 HGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCN 250

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSG--FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           I I        +E+A    +L+++ G   +PDV TY  L+ GLC    ++EA++    M 
Sbjct: 251 IWIRGLCEDGRLEEAV---ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMM 307

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                P+D  YN +I GYCK G    A  LL +   KG VP+  +Y S I  LC +G   
Sbjct: 308 NQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIE 367

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYR 568
            A  L N+     LKP + +YN L +
Sbjct: 368 RALELFNEAQAKDLKPDLVVYNSLVK 393



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 1/223 (0%)

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT-YNVLIRAFSKAGNSKMAS 405
           +  +  Y  LI     AG  D         +S+    S+   Y   I+A+++AG  + A 
Sbjct: 32  ASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAV 91

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D    M+     P+   Y  ++D+ V +   ++A ++Y  M  +G +PD  T+ V +   
Sbjct: 92  DAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF 151

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C+ G    A +L  S+ E   +     Y  ++ G    G+ Y A  L  EM  + + P++
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A++++ +  LCQ G   E+  LL ++LK G+  +    NI  R
Sbjct: 212 ATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 237/459 (51%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I   LKSR   +A+  + +M+  G RP   T++SL++ + K    D       E  
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +VY+F I I+    AG +N+A+E+L ++++ G  P+VV YT LID  C    ++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F K+        + TY  L+     N       +F+ +M+ +G  P + T+  L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G   E F   D MR + +  N+ TYNTLICGL +  R+ +A  L   M+  G+ 
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P   TY   ID +  +G++  A   F ++K+ G +P++V  N  + + +KAG  + A  +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              +++ G+ P  VTY +++  + +  ++++A ++ S M ++G  PDV     LI+ L  
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA K+F  M E KL+P  V YN ++ G  K G    A+ L   M +KG  PN  +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +++    LC++ +   A  +L +M+ +G  P V  YN +
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 234/505 (46%), Gaps = 43/505 (8%)

Query: 103  VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
            V  S  Y  ++  + K    D+A+    +M+++G  P     NSL+  + K+   D+ W 
Sbjct: 500  VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559

Query: 162  LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            +F      K++  V ++  L+ G  + G + +A E+   + + G  PN + + +L D  C
Sbjct: 560  MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619

Query: 222  KNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            KN ++  A KMLF K+ ++G V    TY  +I GL KNG  K+   F+ +M+   V P  
Sbjct: 620  KNDEVTLALKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677

Query: 281  YTYNCLIHEYCNEGKVSEGFKLFDEMRHR-------------------EVAC-NVVTYN- 319
             T   L+        + + +K+     +                    E    N V+++ 
Sbjct: 678  VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737

Query: 320  ----------------TLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCD 362
                             +I   CK   V  A  L ++  K  G+ P + TYN LI G  +
Sbjct: 738  RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797

Query: 363  AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            A   + A  +F Q+KS G  P V TYN L+ A+ K+G      +L +EM       + +T
Sbjct: 798  ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857

Query: 423  YTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            + I+I   V++ +++ A ++ Y LM    FSP   TYG LI GL   G + EA +LF  M
Sbjct: 858  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             +    PN  +YN++I G+ K G +  A  L   M ++G+ P++ +YS  +  LC  G+ 
Sbjct: 918  LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977

Query: 542  PEAEVLLNQMLKLGLKPSVSLYNIL 566
             E      ++ + GL P V  YN++
Sbjct: 978  DEGLHYFKELKESGLNPDVVCYNLI 1002



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 196/394 (49%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           L+ YS+  LI    ++    +A EV  ++   GF P++  Y+SL+ G  K  DI+    L
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            +++  LGL    +T+T+ I  L + G   + +E  ++M   G  P + TY  LI   C 
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
             K+    ++F++M+      + VTY TL+        +   ++   +M+  G  P+V+T
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  L+D  C AG   +AF   + ++  G  P++ TYN LI    +      A +L   ME
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G+ P+  TY + ID + +S D   A E +  M+  G +P++      ++ L   G  +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA ++F  + +  L P+ V YNMM+  Y K G    A++LL EM E G  P++   +S I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             L +  +  EA  +  +M ++ LKP+V  YN L
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 225/498 (45%), Gaps = 40/498 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + ++ D   K+     AL    +M+D G  P   T+N+++  ++K+    +   FF + +
Sbjct: 611  FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ---------------------LEEMGFS 207
              V  D  +   L+ G  +A  +  A++++                       L E G  
Sbjct: 671  KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGID 730

Query: 208  PNVVIYTSLI-DGCCKNGD---------------IERAKMLFRKIG-ELGLVATQHTYTV 250
              V     L+ +G C++GD               +  A+ LF K   +LG+     TY +
Sbjct: 731  NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            LI GL +  + +   + + +++  G  P + TYN L+  Y   GK+ E F+L+ EM   E
Sbjct: 791  LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERL-LDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               N +T+N +I GL K   V +A  L  D M     SP   TY  LIDG   +G   +A
Sbjct: 851  CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910

Query: 370  FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             +LF  +   G  P+   YN+LI  F KAG +  A  L + M + G+ P   TY++L+D 
Sbjct: 911  KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970

Query: 430  FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEP 488
                  +++    +  +++SG +PDV  Y ++I+GL     ++EA  LFN M  ++ + P
Sbjct: 971  LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030

Query: 489  NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            +   YN +I      G    A ++  E+   GL PN+ ++++ I      GK   A  + 
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090

Query: 549  NQMLKLGLKPSVSLYNIL 566
              M+  G  P+   Y  L
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 189/391 (48%), Gaps = 10/391 (2%)

Query: 193 KAFEVLNQLEEMGFSPNVV----------IYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           +A  V  +LEEM +  +++           Y ++       G +++A    RK+ E G V
Sbjct: 126 EALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV 185

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
              ++Y  LI  L K+    +  E Y +M L G  PSL TY+ L+        +     L
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM    +  NV T+   I  L +  ++ EA  +L +M   G  P+V+TY  LID  C 
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A + D A  +F ++K+    P  VTY  L+  FS   +         EME+ G  P  VT
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +TIL+D+  ++ +  +AF+   +M+  G  P+++TY  LI GL     + +A +LF +M 
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++P    Y + I  Y K G+S  AL    +M  KG+ PNI + ++++  L + G+  
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           EA+ +   +  +GL P    YN++ +  + +
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 231/534 (43%), Gaps = 73/534 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +IDA   +R  D A   F +M     +P   T+ +LL     +   D    F+SE  
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV +F IL+   C+AG+  +AF+ L+ + + G  PN+  Y +LI G  +   ++
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  +  LG+  T +TY V I    K+G      E +EKM+  G++P++   N  +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +     G+  E  ++F  ++   +  + VTYN ++    K   + EA +LL +M   G  
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI  N LI+    A   D+A+++F ++K     P+VVTYN L+    K G  + A +L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY--------- 458
              M ++G  P+ +T+  L D   ++D++  A +M   M   G  PDV+TY         
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655

Query: 459 -GVLIHGLCMKGNMK------------------------EASKLF-NSMWETKLEPNDVV 492
            G +   +C    MK                        +A K+  N ++    +P ++ 
Sbjct: 656 NGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715

Query: 493 YNMMIF---------------------GYCKEG--------------NSYRALRLLGEMN 517
           +  +I                      G C++G              N+    R L E  
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775

Query: 518 EK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K  G+ P + +Y+  IG L +      A+ +  Q+   G  P V+ YN L  A
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 153/327 (46%)

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           G L LV T  T   ++  L  +G  ++    ++ MQ   +     TY  +      +G +
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +      +MR      N  +YN LI  L K     EA  +  +M + G  P++ TY+ L
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           + G     + D    L  ++++ G  P+V T+ + IR   +AG    A ++++ M++ G 
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTYT+LID+   +  ++ A E++  M+     PD  TY  L+       ++    +
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            ++ M +    P+ V + +++   CK GN   A   L  M ++G++PN+ +Y++ I  L 
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +  +  +A  L   M  LG+KP+   Y
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTY 436



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 10/291 (3%)

Query: 286 LIH--EYCN--------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           L+H  E CN        +GK+ E   +FD M+ R +  +  TY T+   L  +  +++A 
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
             L +M+  G   N  +YN LI     +    +A  ++ ++   G  PS+ TY+ L+   
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K  +      L++EME  G+ P+  T+TI I    R+  + +A+E+   M   G  PDV
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY VLI  LC    +  A ++F  M   + +P+ V Y  ++  +    +     +   E
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M + G VP++ +++  +  LC+ G + EA   L+ M   G+ P++  YN L
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y  +I+   K+  +D A   F +M+  GVRP                            
Sbjct: 928  IYNILINGFGKAGEADAACALFKRMVKEGVRP---------------------------- 959

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                  D+ ++ +L+   C  G +++      +L+E G +P+VV Y  +I+G  K+  +E
Sbjct: 960  ------DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013

Query: 228  RAKMLFRKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A +LF ++    G+    +TY  LI  L   G+ ++  + Y ++Q  G+ P+++T+N L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            I  Y   GK    + ++  M     + N  TY  L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 2/147 (1%)

Query: 107  RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            + Y  ++D        D+ L YF ++ +SG+ P    +N ++  + KS   ++  + F+E
Sbjct: 962  KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021

Query: 167  NRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             +    +  D+Y++  LI     AG + +A ++ N+++  G  PNV  + +LI G   +G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVL 251
              E A  +++ +   G      TY  L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 224/430 (52%), Gaps = 2/430 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M + G+ P + T N ++    +    +   L F E   + V+ D  S+ +++   C+ G
Sbjct: 160 EMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIG 219

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           ++ +A + L+ + E GF  +   +T +I      G   RA   FR++ ++GL      +T
Sbjct: 220 NILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFT 279

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RH 308
            +I GL K G  K  FE  E+M   G  P++YT+  LI   C +G   + F+LF ++ R 
Sbjct: 280 CMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRS 339

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                NV+TY  +I G C+E ++  AE LL +MK  G+ PN  TY  LIDG C AG  ++
Sbjct: 340 ENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFER 399

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A+ L N + S G SP++ TYN ++    K G  + A  ++ +  + G+ P + TY IL+ 
Sbjct: 400 AYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMS 459

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              + +++ +A  +++ M K G  PD+++Y  LI   C +  MKE+   F       + P
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP 519

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            +  Y  MI GYC+EGN   A++    +++ G  P+  +Y + I  LC+  K  EA  L 
Sbjct: 520 TNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLY 579

Query: 549 NQMLKLGLKP 558
           + M++ GL P
Sbjct: 580 DSMIEKGLVP 589



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 214/401 (53%), Gaps = 7/401 (1%)

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           SE  C+V         +++   E G L +A E++ ++   G  PN      +I    + G
Sbjct: 131 SEKACEV------MRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMG 184

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A++LF ++   G+     +Y V++    K G   +  ++   M   G      T+ 
Sbjct: 185 LVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFT 244

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I  +  +G  +     F  +    +  N++ +  +I GLCK   +++A  +L++M   
Sbjct: 245 LIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGK 304

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           G  PNV T+  LIDG C  G T+KAFRLF +L +S    P+V+TY  +I  + +      
Sbjct: 305 GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 364

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  M+E+G+ P+  TYT LID   ++ + E+A+++ +LM   GFSP++ TY  +++
Sbjct: 365 AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVN 424

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC +G ++EA K+    ++  L+P+   YN+++  +CK+ N  +AL L  +M + G+ P
Sbjct: 425 GLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQP 484

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +I SY++ I V C++ +  E+E+   + +++G+ P+   Y 
Sbjct: 485 DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYT 525



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 202/442 (45%), Gaps = 47/442 (10%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI------------- 149
           V  +R    II    +  L + A   F +M   GV+P S ++  +++             
Sbjct: 167 VPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADK 226

Query: 150 ---------FVIKSCSFD--------KG------WLFFSENRCKVELDVYSFGILIKGCC 186
                    FV+ + +F         KG      W F       +E ++ +F  +I+G C
Sbjct: 227 WLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLC 286

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G + +AFE+L ++   G+ PNV  +TSLIDG CK G  E+A  LF     L LV +++
Sbjct: 287 KRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF-----LKLVRSEN 341

Query: 247 ------TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TYT +I G  +            +M+  G+ P+  TY  LI  +C  G     +
Sbjct: 342 HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L + M     + N+ TYN ++ GLCK  RVQEA ++L+     G+ P+  TYN L+   
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEH 461

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C      +A  LFN++   G  P + +Y  LI  F +    K +     E    GI P+ 
Sbjct: 462 CKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TYT +I  + R  ++  A + +  +   G +PD  TYG +I GLC +    EA  L++S
Sbjct: 522 KTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDS 581

Query: 481 MWETKLEPNDVVYNMMIFGYCK 502
           M E  L P +V    + + YCK
Sbjct: 582 MIEKGLVPCEVTRITLAYEYCK 603



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 15/367 (4%)

Query: 65  AAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQ 124
           A  TLI+   SG+     +T R+L  +  +L      P   +  +  +I+   K     Q
Sbjct: 241 ATFTLIISRFSGK----GYTTRALW-YFRRLVDMGLEPNLIN--FTCMIEGLCKRGSIKQ 293

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-----SENRCKVELDVYSFG 179
           A     +M+  G +P   T  SL+  + K    +K +  F     SEN    + +V ++ 
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENH---KPNVLTYT 350

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            +I G C    LN+A  +L++++E G  PN   YT+LIDG CK G+ ERA  L   +   
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY  ++ GL K G  ++ ++  E    NG+ P  +TYN L+ E+C +  + + 
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             LF++M    +  ++ +Y TLI   C+E R++E+E   ++    GI P   TY  +I G
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICG 530

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C  G    A + F++L  +G +P  +TY  +I    K      A  L   M E+G+ P 
Sbjct: 531 YCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPC 590

Query: 420 EVTYTIL 426
           EVT   L
Sbjct: 591 EVTRITL 597



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++ +FS+ G  K A ++V EM  +G+ P+  T   +I        +E A  ++  M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  +Y V++   C  GN+ EA K  + M E     ++  + ++I  +  +G + RAL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                + + GL PN+ +++  I  LC+ G   +A  +L +M+  G KP+V  +  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
           R+SD A+    QM++ G RP + TF +L+  +F+    S     +     R C+  L   
Sbjct: 132 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 188

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G+++ G C+ GD + A  +LN++E      +VVI+ ++ID  CK   ++ A  LF+++
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI  L   G   D  +    M    ++P+L T+N LI  +  EGK 
Sbjct: 249 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 308

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL+D+M  R +  ++ TYN+L+ G C   R+ +A+++ + M      P+V+TYN L
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC +   +    LF ++   G     VTY  LI+     G+   A  + ++M   G+
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  +TY+IL+D    +  +EKA E++  MQKS    D+Y Y  +I G+C  G + +   
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF S+    ++PN V YN MI G C +     A  LL +M E G +PN  +Y++ I    
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 537 QDGKWPEAEVLLNQM 551
           +DG    +  L+ +M
Sbjct: 549 RDGDKAASAELIREM 563



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 211/396 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  PN+V Y  +++G CK GD + A  L 
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 210

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    +  +I  L K     D    +++M+  G+ P++ TY+ LI   C+ 
Sbjct: 211 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 270

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  +++  N+VT+N LI    KE +  EAE+L D M    I P++ TY
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 330

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L++GFC     DKA ++F  + S    P VVTYN LI+ F K+   +  ++L REM  
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 390

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTYT LI       D + A +++  M   G  PD+ TY +L+ GLC  G +++
Sbjct: 391 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 450

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F+ M +++++ +  +Y  MI G CK G       L   ++ KG+ PN+ +Y++ I 
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC      EA  LL +M + G  P+   YN L RA
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 546



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 9/480 (1%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           +C+  + F S S        Y  I+   L     D A+  F  M+ S   P    FN LL
Sbjct: 1   MCYWGRAFSSGSGD------YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLL 54

Query: 149 IFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
             + K   FD   +   E   ++E+   +Y++ ILI   C    ++ A  +L ++ ++G+
Sbjct: 55  SAIAKMKKFDV-VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 113

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P++V  +SL++G C    I  A  L  ++ E+G      T+T LI GLF +    +   
Sbjct: 114 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 173

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             ++M   G  P+L TY  +++  C  G       L ++M   ++  +VV +NT+I  LC
Sbjct: 174 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 233

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K   V +A  L  +M+  GI PNV+TY+ LI   C  G    A +L + +     +P++V
Sbjct: 234 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 293

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+N LI AF K G    A  L  +M +R I P   TY  L++ F   D ++KA +M+  M
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 353

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                 PDV TY  LI G C    +++ ++LF  M    L  + V Y  +I G   +G+ 
Sbjct: 354 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 413

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A ++  +M   G+ P+I +YS  +  LC +GK  +A  + + M K  +K  + +Y  +
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           ++ +IID+  K R  D AL  F +M   G+RP   T++SL+  +   CS+    D   L 
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 280

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  ++ +F  LI    + G   +A ++ + + +    P++  Y SL++G C +
Sbjct: 281 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +++AK +F  +          TY  LI G  K+   +DG E + +M   G+     TY
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI    ++G      K+F +M    V  +++TY+ L+ GLC   ++++A  + D M+ 
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  ++  Y  +I+G C AG+ D  + LF  L   G  P+VVTYN +I         + 
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+++M+E G  P+  TY  LI + +R  D   + E+   M+   F  D  T G++ +
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 580

Query: 464 GL 465
            L
Sbjct: 581 ML 582



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 142/287 (49%)

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  ++    ++ K+ +   LF  M       ++V +N L+  + K  +      L ++M+
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
              I   + TYN LI+ FC   +   A  L  ++   G  PS+VT + L+  +       
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  LV +M E G  P  +T+T LI      +   +A  +   M + G  P++ TYGV++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +GLC +G+   A  L N M   K+E + V++N +I   CK  +   AL L  EM  KG+ 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           PN+ +YSS I  LC  G+W +A  LL+ M++  + P++  +N L  A
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D    +   ++AL  F  M  S ++     + +++  + K+   D GW LF S +
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 494

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V ++  +I G C    L +A+ +L +++E G  PN   Y +LI    ++GD  
Sbjct: 495 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 554

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            +  L R++     V    T   L+  +  +G
Sbjct: 555 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 585


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/562 (28%), Positives = 258/562 (45%), Gaps = 55/562 (9%)

Query: 19  RMAKLPPLK---AFSLFNWASRQG---LQHTPQSISIILRLLL-SKMSSHSHAAAQTLIL 71
           R+A L P+    A    NW  +Q    L H    I     +L+ ++M + +    + L+ 
Sbjct: 23  RLASLRPVHGRLALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQ 82

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFP-SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
             I            S+   L + +P  +SNP     +++ +I   L++R+   A+  F+
Sbjct: 83  LPIG---------LNSVFGALMETYPICNSNPA----VFDLLIRVCLRNRMVGDAVQTFY 129

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
            M   G+ P   T N +L  ++K    D  W FF              G+L KG C    
Sbjct: 130 LMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFK-------------GMLAKGIC---- 172

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
                            P+V  +  L++  C+ G  + A  L RK+ E G+  T  TY  
Sbjct: 173 -----------------PDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNT 215

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+    K G  K   +  + M   G+   + TYN  I   C + + ++G+ L   MR   
Sbjct: 216 LLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNM 275

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           V  N +TYNTLI G  +E +++ A ++ D+M +  + PN ITYN LI G C  G   +A 
Sbjct: 276 VYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEAL 335

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           RL + + S+G  P+ VTY  L+    K     M S ++  M   G+  S ++YT +ID  
Sbjct: 336 RLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGL 395

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++  +E+A ++   M K   +PDV T+ VLI+G    G +  A ++   M++T L PN 
Sbjct: 396 CKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNG 455

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           ++Y+ +I+ YCK G    AL     MN  G V +  + +  +   C+ GK  EAE  +N 
Sbjct: 456 ILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNH 515

Query: 551 MLKLGLKPSVSLYNILYRAKNN 572
           M ++GL P+   ++ +     N
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGN 537



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 224/480 (46%), Gaps = 37/480 (7%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIK-----------SCSFDKG-------WLFFS 165
            A F   +M +SGV P + T+N+LL +  K            C   KG       +  F 
Sbjct: 193 NAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFI 252

Query: 166 ENRCK------------------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
           +N C+                  V  +  ++  LI G    G +  A +V +++      
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PN + Y +LI G C  G+I  A  L   +   GL   + TY  L+ GL+KN         
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSI 372

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
            E+M++ GV  S  +Y  +I   C  G + E  +L D+M    V  +VVT++ LI G  +
Sbjct: 373 LERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFR 432

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             ++  A+ ++ +M   G+ PN I Y+ LI  +C  G   +A   +  +  +G      T
Sbjct: 433 VGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFT 492

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            NVL+  F + G  + A   +  M   G+ P+ VT+  +I+ +  S D  KAF ++  M 
Sbjct: 493 CNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMN 552

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  P ++TYG L+ GLC+ G++ EA K F+ +       ++V++N  +   C+ GN  
Sbjct: 553 SFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLS 612

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNIL 566
            A+ L+ EM     +P+  +Y++ I  LC+ GK   A +L  + ++ G L P+ ++Y  L
Sbjct: 613 DAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSL 672



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 2/463 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  ++ II+ +  S  + +A   F +M   G  P   T+  LL  +      ++   FF 
Sbjct: 525 SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584

Query: 166 ENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             RC    +D   F   +   C +G+L+ A  ++N++    F P+   YT+LI G CK G
Sbjct: 585 RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG 644

Query: 225 DIERAKMLFRKIGELGLVATQ-HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            I  A +L  K  E GL++     YT L+ GL K+G  +     +E+M    V P    +
Sbjct: 645 KIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N +I +Y  +GK S+   +   M+ + +  N+ TYN L+ G  K   +     L   M  
Sbjct: 705 NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIR 764

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  P+  +++ LI G+C +   D A ++   +   G      T+N+LI  F +    K 
Sbjct: 765 HGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +LV++M +  + P+  TY  L +  +R+ D  KA  +  ++ +SG  P    Y  LI+
Sbjct: 825 AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G+C  GN+K A KL + M    +  ++V  + ++ G         A+ +L  M E  ++P
Sbjct: 885 GMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP 944

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A++++ + V C++    +A  L + M    +K  V  YN+L
Sbjct: 945 TVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVL 987



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 228/549 (41%), Gaps = 74/549 (13%)

Query: 93  TQLFPSSS--NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           T++F   S  N +  S  Y ++I  H  +    +AL     M+  G+RP   T+ +LL  
Sbjct: 300 TKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNG 359

Query: 151 VIKSCSFDK------------------GWLFFSENRCK------------------VELD 174
           + K+  F                     +    +  CK                  V  D
Sbjct: 360 LYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI-DGC------------- 220
           V +F +LI G    G +N A E++ ++ + G  PN ++Y++LI + C             
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYA 479

Query: 221 ---------------------CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
                                C+ G +E A+     +  +GL     T+  +I G   +G
Sbjct: 480 VMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                F  ++KM   G  PSL+TY  L+   C  G ++E  K F  +R    A + V +N
Sbjct: 540 DALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFN 599

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           T +   C+   + +A  L+++M      P+  TY  LI G C  G+   A  L  +    
Sbjct: 600 TKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEK 659

Query: 380 GQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           G  SP+   Y  L+    K G+++ A  +  EM  + + P  V + ++ID + R     K
Sbjct: 660 GLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSK 719

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
             ++ S M+      ++ TY +L+HG   +  M     L+  M      P+   ++ +I 
Sbjct: 720 VNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLIL 779

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC+  +   A+++L  +  +G V +  +++  I   C+  +  +A  L+ QM +  + P
Sbjct: 780 GYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIP 839

Query: 559 SVSLYNILY 567
           +V  YN L+
Sbjct: 840 NVDTYNALF 848



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 53/454 (11%)

Query: 72   KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
            KI++  + S     + LL         S NP     +Y S++D  LK   +  AL+ F +
Sbjct: 645  KIVAALLLSGKAIEKGLL---------SPNPA----VYTSLVDGLLKHGHARAALYIFEE 691

Query: 132  MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
            ML+  V P +  FN                         V +D YS           G  
Sbjct: 692  MLNKDVEPDTVAFN-------------------------VIIDQYS---------RKGKT 717

Query: 192  NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            +K  ++L+ ++      N+  Y  L+ G  K   + R  ML++ +   G +  + ++  L
Sbjct: 718  SKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSL 777

Query: 252  ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            I G  ++       +    + L G     +T+N LI ++C   ++ + F+L  +M    V
Sbjct: 778  ILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV 837

Query: 312  ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
              NV TYN L  GL +     +A R+L  +  +G  P    Y  LI+G C  G    A +
Sbjct: 838  IPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMK 897

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFS---KAGNSKMASDLVREMEERGITPSEVTYTILID 428
            L +++K+ G S   V  + ++R  +   K  N+    DL+ EM+   I P+  T+T L+ 
Sbjct: 898  LQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ---IIPTVATFTTLMH 954

Query: 429  SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             + +  ++ KA E+ S+M+      DV  Y VLI GLC  G+++ A KL+  M +  L P
Sbjct: 955  VYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWP 1014

Query: 489  NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            N  +Y ++I  +C       + +LL ++ ++ L+
Sbjct: 1015 NTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELM 1048



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 196/466 (42%), Gaps = 37/466 (7%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGIL 181
            ++AL +FH++        +  FN+ L    +S +        +E      L D +++  L
Sbjct: 577  NEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNL 636

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFR------ 234
            I G C+ G +  A  +  +  E G  SPN  +YTSL+DG  K+G    A  +F       
Sbjct: 637  IAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD 696

Query: 235  ----------------------KIGEL-------GLVATQHTYTVLICGLFKNGLQKDGF 265
                                  K+ ++        L     TY +L+ G  K       F
Sbjct: 697  VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756

Query: 266  EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              Y+ M  +G  P  ++++ LI  YC         K+   +       +  T+N LI   
Sbjct: 757  MLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKF 816

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            C+   +++A  L+ QM    + PNV TYN L +G     +  KA R+   L  +G  P+ 
Sbjct: 817  CERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTN 876

Query: 386  VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
              Y  LI    + GN K A  L  EM+  GI+   V  + ++     S  +E A  +  L
Sbjct: 877  KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL 936

Query: 446  MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            M +    P V T+  L+H  C + N+ +A +L + M    ++ + V YN++I G C  G+
Sbjct: 937  MLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGD 996

Query: 506  SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
               A +L  EM ++ L PN + Y   I   C      E+E LL  +
Sbjct: 997  IEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDI 1042


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 237/456 (51%), Gaps = 2/456 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +++++  +  L D+    + +ML+  V P   T+N ++    K  + ++   + S+  
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D +++  LI G C+  DL+ AF+V N++   G   N V YT LI G C    I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ +     T  TYTVLI  L  +  + +     ++M+  G+ P+++TY  LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C++ K  +  +L  +M  + +  NV+TYN LI G CK   +++A  +++ M+   +S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TYN+LI G+C +    KA  + N++      P VVTYN LI    ++GN   A  L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M +RG+ P + TYT +IDS  +S  +E+A +++  +++ G +P+V  Y  LI G C 
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + EA  +   M      PN + +N +I G C +G    A  L  +M + GL P +++
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
            +  I  L +DG +  A     QML  G KP    Y
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 208/431 (48%), Gaps = 34/431 (7%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           K +L +  +  L+      G +++  +V  ++ E    PN+  Y  +++G CK G++E A
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
                KI E GL     TYT LI G  +       F+ + +M L G   +   Y  LIH 
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C   ++ E   LF +M+  E    V TY  LI  LC   R  EA  L+ +M+  GI PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           + TY  LID  C   + +KA  L  Q+   G  P+V+TYN LI  + K G  + A D+V 
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417

Query: 410 EME----------------------------------ERGITPSEVTYTILIDSFVRSDD 435
            ME                                  ER + P  VTY  LID   RS +
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            + A+ + SLM   G  PD +TY  +I  LC    ++EA  LF+S+ +  + PN V+Y  
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I GYCK G    A  +L +M  K  +PN  ++++ I  LC DGK  EA +L  +M+K+G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597

Query: 556 LKPSVSLYNIL 566
           L+P+VS   IL
Sbjct: 598 LQPTVSTDTIL 608



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 235/479 (49%), Gaps = 23/479 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSE 166
           Y  +ID+       ++A     QML+ G+ P   T+N+L+    K    +     +   E
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R K+  +  ++  LIKG C++ +++KA  VLN++ E    P+VV Y SLIDG C++G+ 
Sbjct: 421 SR-KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L   + + GLV  Q TYT +I  L K+   ++  + ++ ++  GV+P++  Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  GKV E   + ++M  +    N +T+N LI GLC + +++EA  L ++M   G+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P V T   LI      G+ D A+  F Q+ S+G  P   TY   I+ + + G    A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG-- 464
           ++ +M E G++P   TY+ LI  +        AF++   M+ +G  P  +T+  LI    
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718

Query: 465 -------------LCMKGNMKE---ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
                        LC   NM E     +L   M E  + PN   Y  +I G C+ GN   
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778

Query: 509 ALRLLGEMNE-KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A ++   M   +G+ P+   +++ +   C+  K  EA  +++ M+ +G  P +    +L
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 196/421 (46%), Gaps = 64/421 (15%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ++IK C   GD   A  VL+   +M       +   LI GC                   
Sbjct: 148 LMIKSCDSVGD---ALYVLDLCRKMNKDERFELKYKLIIGC------------------- 185

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
                   Y  L+  L + GL  +  + Y +M  + V P++YTYN +++ YC  G V E 
Sbjct: 186 --------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            +   ++    +  +  TY +LI G C+   +  A ++ ++M + G   N + Y  LI G
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C A   D+A  LF ++K +   P+V TY VLI++   +     A +LV+EMEE GI P+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG---------- 469
             TYT+LIDS       EKA E+   M + G  P+V TY  LI+G C +G          
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417

Query: 470 ------------------------NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
                                   N+ +A  + N M E K+ P+ V YN +I G C+ GN
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A RLL  MN++GLVP+  +Y+S I  LC+  +  EA  L + + + G+ P+V +Y  
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 566 L 566
           L
Sbjct: 538 L 538



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 217/482 (45%), Gaps = 56/482 (11%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y  +I  + KS +  +A+   ++ML+  V P   T+NSL+    +S +FD  +   S
Sbjct: 428 TRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N   +  D +++  +I   C++  + +A ++ + LE+ G +PNVV+YT+LIDG CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A ++  K+     +    T+  LI GL  +G  K+     EKM   G+ P++ T  
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH    +G     +  F +M       +  TY T I   C+E R+ +AE ++ +M+  
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666

Query: 345 GISPNVITYNKLIDGFCDAGETDKAF---------------------------------- 370
           G+SP++ TY+ LI G+ D G+T+ AF                                  
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726

Query: 371 -------------------RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
                               L  ++  +  +P+  +Y  LI    + GN ++A  +   M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786

Query: 412 EE-RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +   GI+PSE+ +  L+    +     +A ++   M   G  P + +  VLI GL  KG 
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
            +  + +F ++ +     +++ + ++I G  K+G       L   M + G   +  +YS 
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906

Query: 531 TI 532
            I
Sbjct: 907 LI 908



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 178/411 (43%), Gaps = 55/411 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID+  KS+  ++A   F  +   GV P    + +L+    K+   D+  L   +  
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L +  +F  LI G C  G L +A  +  ++ ++G  P V   T LI    K+GD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F+++   G     HTYT  I    + G   D  +   KM+ NGVSP L+TY+ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI------------------CGLCKEM 329
             Y + G+ +  F +   MR      +  T+ +LI                  C +   M
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTY 388
                  LL++M    ++PN  +Y KLI G C+ G    A ++F+ ++ N G SPS + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 389 NVLIRAFSKAGNSKMASDLVREM------------------------EERGIT------- 417
           N L+    K      A+ +V +M                        +ERG +       
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 418 ----PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                 E+ + I+ID   +   +E  +E++++M+K+G      TY +LI G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 233/480 (48%), Gaps = 36/480 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD------KGWLFFSEN--------- 167
           D AL YF+QM+     P    FN LL  +++   +D      +   FF  +         
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 168 ---RCKVEL------------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
               C + L                   + +F  LI G C  G + +A E L+ +   G+
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P V  +T +++G CK G    A +  +K+ EL       +Y+++I  L KN L  +  +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            +  M+  G+SP++ TYN LI+  CN G+  +   LF EM    +  +VVT++ L+  LC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           KE  V EA  +  +M    + P+++TY+ LI G C +    ++  L N++ S    P VV
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+++ +  F K G    A  ++  M ERG+ P+ VTY  L+D +     M++A +++ +M
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G +PDV +Y +LI G C    + EA +LF+ M    L PN + +  +I G C+ G  
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y A  L  +M   G  P++ +YS+ +   C+ G   EA  L   + K  LKP+  +  IL
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 200/359 (55%), Gaps = 4/359 (1%)

Query: 171 VELD----VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           VELD    V S+ I+I   C+   +N+A ++   +  +G SP VV Y SLI G C +G  
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A +LF+++ E  +     T+++L+  L K G+  +    + KM    + P + TY+ L
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH  C      E   L +EM  R +  +VVT++  +   CK+  V EA+ +++ M   G+
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+TYN L+DG+C   + D+A ++F+ + + G +P V++YN+LI+ + K+     A  
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  EM  +G+TP+ +T+T LI    ++     A E++  M   G  PD+ TY  L+ G C
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             G++ EA  LF ++ +++L+PN V+  +++ G CK G    A  L   ++ + L P++
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 197/386 (51%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           VY+  +++ G C+ G  + A   + ++ E+   P VV Y+ +ID  CKN  +  A  LF 
Sbjct: 209 VYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFY 268

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +  +G+  T  TY  LI G+  +G  K     +++M    + P + T++ L+   C EG
Sbjct: 269 HMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEG 328

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            V E   +F +M    +  ++VTY++LI G+CK    +E+  LL++M    I P+V+T++
Sbjct: 329 VVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS 388

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             +D FC  G   +A  + N +   G  P+VVTYN L+  +        A  +   M  +
Sbjct: 389 IWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK 448

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P  ++Y ILI  + +S+ +++A +++  M   G +P+  T+  LI GLC  G    A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  M      P+ + Y+ ++ G+CK G+   AL L   + +  L PN       +G 
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGG 568

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSV 560
           +C+ GK  +A+ L + +    L+P V
Sbjct: 569 MCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 196/394 (49%), Gaps = 9/394 (2%)

Query: 182 IKGCCEAG---DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           ++  C+ G   + + A    NQ+  M   P +  +  L+    +    +    ++RK+  
Sbjct: 73  VRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF 132

Query: 239 LGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
            G+  + +T T+LI   C L   GL   GF    K+   G  PS+ T+N LI+  C EG+
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGL---GFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E  +  D +  R     V T+  ++ GLCK  +   A   + +M      P V++Y+ 
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID  C     ++A  LF  ++S G SP+VVTYN LI     +G  K AS L +EM E  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  VT++IL+D+  +   + +A  ++  M +    PD+ TY  LIHG+C     KE+S
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L N M    + P+ V +++ +  +CK+G    A  ++  M E+GL PN+ +Y+S +   
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C   +  EA  + + M+  G  P V  YNIL + 
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 184/348 (52%), Gaps = 1/348 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  IID+  K+RL ++A+  F+ M   G+ P   T+NSL+  +  S  + +  + F E  
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ DV +F IL+   C+ G + +A  V  ++ ++   P++V Y+SLI G CK+   +
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  L  ++    +     T+++ +    K G+  +       M   G+ P++ TYN L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC   ++ E  K+FD M ++  A +V++YN LI G CK  R+ EA++L D+M   G++
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN IT+  LI G C AG    A  LF ++ S+G  P ++TY+ L+  F K G+   A  L
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              +++  + P+ V   IL+    ++  +E A E++S +      PDV
Sbjct: 547 FEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 223/434 (51%), Gaps = 20/434 (4%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G  P   TFN+LL  +       +    F +  CK   +V +F  L+ G
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ-MCKP--NVVTFTTLMNG 90

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ EL  +  
Sbjct: 91  LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL+K+G   D    + +MQ  G+ P + TY+C+I+ +C+ GK SE  +L 
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R+++ +VVT++ LI  L KE  +  A+ LL +M  +G+ PNV+T N L+DG CD+
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 364 GETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           G+   A  +F  ++            NG  P V TYN+LI      G    A +L  EM 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            RGI P  VTY+ +I+   +   +++A +M+  M    FSP++ T+  LI G C  G + 
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +  +LF  M    +  N + Y  +I G+ K GN   +L +  EM   G+ P+  +  + +
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 533 GVLCQDGKWPEAEV 546
                 G W + E+
Sbjct: 451 -----TGLWSKEEL 459



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 207/412 (50%), Gaps = 16/412 (3%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++  D+YSF ILIK  C    L  A     +L ++GF P +V + +L+ G C    +  A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++ +  +V    T+T L+ GL + G   +     ++M  +G+ P+  TY  ++  
Sbjct: 70  LDLFHQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 290 YCNEGKVSEGFKLFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            C  G       L  +M     +  +VV Y+ +I GL K+ R  +A+ L  +M+  GI P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +++TY+ +I+GFC +G+  +A RL  ++     SP VVT++ LI A  K G+   A DL+
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYT 457
           +EM   G+ P+ VT   L+D    S  ++ A EM+  MQKS           G  PDV T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y +LI GL  +G   EA +L+  M    + P+ V Y+ MI G CK+     A ++   M 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K   PNI ++++ I   C+ G   +   L  +M + G+  +   Y  L R 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 13/354 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+D   K   +  AL    +M + S ++P    +++++  + K          F E 
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D+ ++  +I G C +G  ++A  +L ++     SP+VV ++ LI+   K GD+
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNG 275
             A+ L +++   G+     T   L+ GL  +G  KD  E ++ MQ            NG
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V P + TYN LI    NEGK  E  +L++EM HR +  + VTY+++I GLCK+ R+ EA 
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           ++ D M     SPN++T+N LI G+C AG  D    LF ++   G   + +TY  LIR F
Sbjct: 359 QMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            K GN   + D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 419 RKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 195/413 (47%), Gaps = 53/413 (12%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM     +P   TF +L+  + +     +            ++ + 
Sbjct: 62  VEDRVS-EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    P+VVIY+++IDG  K+G    A+ LF 
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 235 KIGELGLVATQHTYTVLICGL------------------------------FKNGLQKDG 264
           ++ + G+     TY+ +I G                                 N L K+G
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 265 F-----EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH----------- 308
                 +  ++M  +GV P++ T N L+   C+ GK+ +  ++F  M+            
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  +V TYN LI GL  E +  EAE L ++M   GI P+ +TY+ +I+G C     D+
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A ++F+ + S   SP++VT+N LI  + KAG      +L  EM  RGI  + +TY  LI 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            F +  ++  + +++  M  SG  PD  T   ++ GL  K  +K A  +   +
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 223/434 (51%), Gaps = 20/434 (4%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G  P   TFN+LL  +       +    F +  CK   +V +F  L+ G
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ-MCKP--NVVTFTTLMNG 90

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ EL  +  
Sbjct: 91  LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 245 QHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL+K+G   D    + +MQ  G+ P + TY+C+I+ +C+ GK SE  +L 
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  R+++ +VVT++ LI  L KE  +  A+ LL +M  +G+ PNV+T N L+DG CD+
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 364 GETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           G+   A  +F  ++            NG  P V TYN+LI      G    A +L  EM 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            RGI P  VTY+ +I+   +   +++A +M+  M    FSP++ T+  LI G C  G + 
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +  +LF  M    +  N + Y  +I G+ K GN   +L +  EM   G+ P+  +  + +
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 533 GVLCQDGKWPEAEV 546
                 G W + E+
Sbjct: 451 -----TGLWSKEEL 459



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 207/412 (50%), Gaps = 16/412 (3%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++  D+YSF ILIK  C    L  A     +L ++GF P +V + +L+ G C    +  A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++ +  +V    T+T L+ GL + G   +     ++M  +G+ P+  TY  ++  
Sbjct: 70  LDLFHQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 290 YCNEGKVSEGFKLFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            C  G       L  +M     +  +VV Y+ +I GL K+ R  +A+ L  +M+  GI P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +++TY+ +I+GFC +G+  +A RL  ++     SP VVT++ LI A  K G+   A DL+
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYT 457
           +EM   G+ P+ VT   L+D    S  ++ A EM+  MQKS           G  PDV T
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y +LI GL  +G   EA +L+  M    + P+ V Y+ MI G CK+     A ++   M 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K   PNI ++++ I   C+ G   +   L  +M + G+  +   Y  L R 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 181/354 (51%), Gaps = 13/354 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y +I+D   K   +  AL    +M + S ++P    +++++  + K          F E 
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + K +  D+ ++  +I G C +G  ++A  +L ++     SP+VV ++ LI+   K GD+
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LNG 275
             A+ L +++   G+     T   L+ GL  +G  KD  E ++ MQ            NG
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V P + TYN LI    NEGK  E  +L++EM HR +  + VTY+++I GLCK+ R+ EA 
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           ++ D M     SPN++T+N LI G+C AG  D    LF ++   G   + +TY  LIR F
Sbjct: 359 QMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            K GN   + D+ +EM   G+ P  +T   ++      ++++KA  M   +Q S
Sbjct: 419 RKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 196/413 (47%), Gaps = 53/413 (12%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
           ++ R+S +AL  FHQM     +P   TF +L+  + +     +            ++ + 
Sbjct: 62  VEDRVS-EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            ++G ++ G C+ GD   A  +L ++EE+    P+VVIY+++IDG  K+G    A+ LF 
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 235 KIGELGLVATQHTYTVLICGL------------------------------FKNGLQKDG 264
           ++ + G+     TY+ +I G                                 N L K+G
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 265 F-----EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH----------- 308
                 +  ++M  +GV P++ T N L+   C+ GK+ +  ++F  M+            
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  +V TYN LI GL  E +  EAE L ++M   GI P+ +TY+ +I+G C     D+
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A ++F+ + S   SP++VT+N LI  + KAG      +L  EM  RGI  + +TY  LI 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            F +  ++  + +++  M  SG  PD  T   ++ GL  K  +K+A  +   +
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 265/553 (47%), Gaps = 47/553 (8%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A   F WA  Q G +HT +S  II+ L+  ++M + +H   + +I+        +S 
Sbjct: 143 PKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIM--------NSR 194

Query: 83  FTPRSLLCHLTQLFPSSSNP-VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
                 +C++  +  S+ N  V+ S +++ +    ++  L ++A   F +M +    P++
Sbjct: 195 MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKA 254

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            + N LL  + KS +                                G L + F   N +
Sbjct: 255 RSCNFLLHRLSKSGN--------------------------------GQLVRKF--FNDM 280

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G +P+V  Y  +ID  CK GD+E ++ LF ++ E+GL     TY  LI G  K G  
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++    + +M+  G  P + TYN LI+ YC   K+   F+ F EM++  +  NVVTY+TL
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   CKE  +Q A +L   M+  G+ PN  TY  LID  C AG   +A++L N +   G 
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
             ++VTY  L+    KAG    A ++ R M + GI+P++  YT L+  +++++ ME A +
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M +    PD+  YG +I G C +  ++E   +   M    +  N V+   +I  Y 
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G S  AL    EM + G+   I +Y   I  LC+ G    A     +ML LGL+P+V+
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640

Query: 562 LYNILYRA--KNN 572
           +Y  L     KNN
Sbjct: 641 VYTSLIDGLCKNN 653



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K    + +   F QM + G+ P   T+NSL+    K  S ++    F+E +
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D+ ++  LI   C+   + +AFE  ++++  G  PNVV Y++LID  CK G ++
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 411

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  +   GL+  + TYT LI    K G   + ++    M   GV  ++ TY  L+
Sbjct: 412 GAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALL 471

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G++ E  ++F  M    ++ N   Y  L+ G  K  R+++A ++L QM    I 
Sbjct: 472 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 531

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++I Y  +I G C   + ++   +  ++KS G S + V    +I A+ KAG S  A + 
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM++ G+  + VTY +LID   ++  +E A + +  M   G  P+V  Y  LI GLC 
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              ++ A KLF+ M    + P+   +  +I G  K GN   AL L+  M E  +  ++  
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y+S +    Q G+  +A    N+M++ G+ P   L   L R
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 210/420 (50%), Gaps = 1/420 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +I+ + K     +A  YF +M ++G++P   T+++L+    K         LF    
Sbjct: 362 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR 421

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  + +++  LI   C+AG+L +A+++LN + + G   N+V YT+L+DG CK G + 
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +FR + + G+   Q  YT L+ G  K    +D  +  ++M    + P L  Y  +I
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 541

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C++ K+ E   + +EM+ R ++ N V   T+I    K  +  +A     +M+  G+ 
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             ++TY  LIDG C AG  + A   F ++ S G  P+V  Y  LI    K    + A  L
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM+ RG+TP    +T LID  ++  ++++A  + S M +     D++ Y  L+ G   
Sbjct: 662 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 721

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A K FN M E  + P +V+   ++  Y K G    A+ L  EM   GL+   A+
Sbjct: 722 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 221/427 (51%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G  P + T N+L+  +       K   F  +   +  +L+  S+  LI G C+ G
Sbjct: 367 KILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A ++L +++     PNV +Y+++ID  CK   +  A  LF ++   G+ A   TY+
Sbjct: 427 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G    G  K+      +M L  ++P + TY  L+     EGKV E   +   M   
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V TYNTL+ G      V++A+ + + M + G++P+V TY  LI+GFC +   D+A
Sbjct: 547 CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEA 606

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P  VTY+ L+    K+G      DL+ EM +RG     +TY  LID 
Sbjct: 607 LNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDG 666

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  ++KA  +++ M+  G  P+ +T+ +L+ GLC  G +K+A ++F  +       +
Sbjct: 667 LCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD 726

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
             +YN+MI+G+CK+G    AL +L +M E G +PN  ++   I  L +  +  +AE LL 
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786

Query: 550 QMLKLGL 556
           QM+  GL
Sbjct: 787 QMIARGL 793



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 221/443 (49%), Gaps = 2/443 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           +L    ++L  G  P + T N+L+  +       +   F  +   +  +L+  S+  LI 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C  GD   A + L +++     PNV +Y ++ID  CK   +  A  LF ++   G+ A
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY+ LI G    G  K+       M L  ++P++ TYN L+   C EGKV E   + 
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M    V  NV+TY+TL+ G      V++A+ + + M + G++P+V +YN +I+GFC  
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              DKA  LF ++  + + P ++ +N ++ +F+K  +   A  L   +E +GI P   T 
Sbjct: 287 KRVDKALNLFKEMILS-RFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            ILI+ F     +   F + + + K G+ P   T   LI GLC+KG +K+A    + +  
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
              + N V Y  +I G CK G++  A++LL +++ +   PN+  YS+ I  LC+     E
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A  L ++M   G+   V  Y+ L
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTL 488



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 249/563 (44%), Gaps = 105/563 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   +   +  A+ +  ++     +P    +N+++  + K     + +  FSE  
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG--- 224
            K +  +V ++  LI G C  G L +A  +LN +     +PNV  Y  L+D  CK G   
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 225 --------------------------------DIERAKMLFRKIGELGLVATQHTYTVLI 252
                                           ++++A+ +F  +  +G+    H+Y ++I
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280

Query: 253 CG------------LFKNGLQK------------DGF----------EFYEKMQLNGVSP 278
            G            LFK  +              D F              +++L G+ P
Sbjct: 281 NGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP 340

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            L+T N LI+ +C+ G+++ GF +  ++  R    + VT NTLI GLC + +V++A    
Sbjct: 341 DLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFH 400

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGET-------------------------------- 366
           D++   G   N ++Y  LI+G C  G+T                                
Sbjct: 401 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 460

Query: 367 ---DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
               +A+ LF+++   G S  VVTY+ LI  F   G  K A  L+ EM  + I P   TY
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           TIL+D+  +   +++A  + ++M K+   PDV+TY  L++G  +   +K+A  +FN+M  
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + P+   Y ++I G+CK      AL L  EM++K +VP+  +YSS +  LC+ G+   
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
              L+++M   G    V  YN L
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSL 663



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 1/348 (0%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +N D   +  +  KI + G      T   LI GL   G  K+   F++K+   G   +  
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +Y  LI+  C  G      K   ++  R    NV  YNT+I  LCK   V EA  L  +M
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + GIS NV+TY+ LI GFC  G+  +A  L N +     +P+V TYN+L+ A  K G  
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           K A  ++  M +  +  + +TY+ L+D +    +++KA  +++ M   G +PDV++Y ++
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+G C    + +A  LF  M  ++  P  + +N ++  + K  +   A+ L   +  KG+
Sbjct: 280 INGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 338

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            P++ + +  I   C  G+      +L ++LK G  PS    N L + 
Sbjct: 339 QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 35/174 (20%)

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +++ D   +  + + + K G+ PD  T   LI GLC+KG +KEA    + +     + N 
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 491 VVYNMMIFGYCKEGNSYRALR-----------------------------------LLGE 515
           V Y  +I G C+ G++  A++                                   L  E
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M  KG+  N+ +YS+ I   C  GK  EA  LLN M+   + P+V  YNIL  A
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDA 212



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 34/209 (16%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S++D   KS           +M D G      T+NS              
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS-------------- 662

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                               LI G C+ G L+KA  + N++++ G  PN   +T L+DG 
Sbjct: 663 --------------------LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G ++ A+ +F+ +   G     + Y V+I G  K GL ++      KM+ NG  P+ 
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNA 762

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            T++ +I+    + +  +  KL  +M  R
Sbjct: 763 VTFDIIINALFKKDENDKAEKLLRQMIAR 791



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A+  F++M D G+RP + TF  LL  + K          F +  
Sbjct: 660 YNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 719

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   LDVY + ++I G C+ G L +A  +L+++EE G  PN V +  +I+   K  + +
Sbjct: 720 TKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEND 779

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L R++   GL+
Sbjct: 780 KAEKLLRQMIARGLL 794


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 271/550 (49%), Gaps = 40/550 (7%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIIL-RLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A S+F+  +R  G  HTP     IL RL   K+ +H        + +I+    T   
Sbjct: 23  PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH--------VSRIVELIRTQKC 74

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRS 141
             P  +                      ++I A+ K+ + DQAL  F +M +  G +P  
Sbjct: 75  KCPEDVAL--------------------TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGI 114

Query: 142 NTFNSLLIFVIKSCSFDKG---WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
            ++NSLL  +I+S  +D+    +L+F        L  Y+  ILIK  C     +KA E+L
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN--ILIKISCRKKQFDKAKELL 172

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           N + E GFSP+V  Y +LI+   KNG +  A  LF ++ E G+      Y +LI G FK 
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232

Query: 259 GLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           G   +  E +E++ L G  V P++ +YN +I+  C  GK  E F+++  M+  E   ++ 
Sbjct: 233 GDILNASEIWERL-LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY+TLI GLC    +  A R+  +M   G+SP+V+ YN +++G+  AG  ++   L+  +
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +  G   +VV+YN+LIR   +      A  +   + E+      +TY +L+    ++  +
Sbjct: 352 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            KA  +    +      D + Y  +I+GLC +G + E + + + M +   +PN  V N +
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+ +      ALR  G M  KG  P + +Y++ I  L +  ++ EA  L+ +ML  G 
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 557 KPSVSLYNIL 566
           KP++  Y++L
Sbjct: 531 KPNMITYSLL 540



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 212/406 (52%), Gaps = 3/406 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           Y  +ID   K      A   + ++L    V P   ++N ++  + K   FD+ + ++   
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + +   D+Y++  LI G C +G+L+ A  V  ++ E G SP+VV+Y ++++G  + G I
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E    L++ + + G   T  +Y +LI GLF+N    +    +E +          TY  L
Sbjct: 342 EECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H  C  G +++   + +E  +     +   Y+++I GLC+E R+ E   +LDQM   G 
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN    N +I+GF  A + + A R F  + S G  P+VVTYN LI   SKA     A  
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           LV+EM  +G  P+ +TY++L++   +   ++ A  ++    + GF PDV  + ++IHGLC
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
             G +++A +L++ M + K  PN V +N ++ G+ K  +  RA ++
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 171/355 (48%), Gaps = 14/355 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y ++I     S   D A   + +M ++GV P    +N++L   +++   ++    W    
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C+    V S+ ILI+G  E   +++A  +   L E     + + Y  L+ G CKNG 
Sbjct: 353 KEGCRT---VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 409

Query: 226 IERAKMLFRKI----GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + +A  +  +     G+L   A    Y+ +I GL + G   +     ++M  +G  P+ +
Sbjct: 410 LNKALSILEEAENGRGDLDTFA----YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
             N +I+ +    K+ +  + F  M  +     VVTYNTLI GL K  R  EA  L+ +M
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G  PN+ITY+ L++G C   + D A  L+ Q    G  P V  +N++I     +G  
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + A  L  EM++R   P+ VT+  L++ F +  D E+A +++  + +S  S + Y
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 5/287 (1%)

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           +I  Y       +   +F  M H    C   + +YN+L+  L +  +  EAE      + 
Sbjct: 84  VIKAYAKNSMPDQALDIFQRM-HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+SPN+ TYN LI   C   + DKA  L N +   G SP V +Y  LI + +K G    
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLI 462
           A  L  EM ERG+TP    Y ILID F +  D+  A E++  L++     P++ +Y V+I
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +GLC  G   E+ ++++ M + +   +   Y+ +I G C  GN   A R+  EM E G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P++  Y++ +    + G+  E   L   M K G +  VS YNIL R 
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 368


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  ++ G C  G+L+K ++++  ++  G  PN  IY S+I   C+   +  A+  F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G++     YT LI G  K G  +   +F+ +M    ++P + TY  +I  +C  
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + E  KLF EM  + +  + VT+  LI G CK   +++A R+ + M  AG SPNV+TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G+ D A  L +++   G  P++ TYN ++    K+GN + A  LV E E 
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+    VTYT L+D++ +S +M+KA E+   M   G  P + T+ VL++G C+ G +++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             KL N M    + PN   +N ++  YC   N   A  +  +M  +G+ P+  +Y + + 
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+     EA  L  +M   G   SVS Y++L + 
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 1/436 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P   ++++++    +    DK W L     R  ++ + Y +G +I   C    L +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            E  +++   G  P+ V+YT+LIDG CK GDI  A   F ++    +     TYT +I G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             + G   +  + + +M   G+ P   T+  LI+ YC  G + + F++ + M     + N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVTY TLI GLCKE  +  A  LL +M   G+ PN+ TYN +++G C +G  ++A +L  
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           + ++ G +   VTY  L+ A+ K+G    A ++++EM  +G+ P+ VT+ +L++ F    
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +E   ++ + M   G +P+  T+  L+   C++ N+K A+ ++  M    + P+   Y 
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ G+CK  N   A  L  EM  KG   ++++YS  I    +  K+ EA  + +QM + 
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

Query: 555 GLKPSVSLYNILYRAK 570
           GL     +++     K
Sbjct: 696 GLAADKEIFDFFSDTK 711



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 216/397 (54%), Gaps = 7/397 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV----VIYTSLIDGCCKNGDIERA 229
           D   F +  +   + G L +A  V  ++   G   +V    V  T L   C K      A
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA---TA 230

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            ++FR+  E+G+     +Y ++I  + + G  K+       M+L G +P + +Y+ +++ 
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  G++ + +KL + M+ + +  N   Y ++I  LC+  ++ EAE    +M   GI P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + Y  LIDGFC  G+   A + F ++ S   +P V+TY  +I  F + G+   A  L  
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +G+ P  VT+T LI+ + ++  M+ AF +++ M ++G SP+V TY  LI GLC +G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           ++  A++L + MW+  L+PN   YN ++ G CK GN   A++L+GE    GL  +  +Y+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +   C+ G+  +A+ +L +ML  GL+P++  +N+L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 271/550 (49%), Gaps = 40/550 (7%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIIL-RLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A S+F+  +R  G  HTP     IL RL   K+ +H        + +I+    T   
Sbjct: 23  PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH--------VSRIVELIRTQKC 74

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRS 141
             P  +                      ++I A+ K+ + DQAL  F +M +  G +P  
Sbjct: 75  KCPEDVAL--------------------TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGI 114

Query: 142 NTFNSLLIFVIKSCSFDKG---WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
            ++NSLL  +I+S  +D+    +L+F        L  Y+  ILIK  C     +KA E+L
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN--ILIKISCRKKQFDKAKELL 172

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           N + E GFSP+V  Y +LI+   KNG +  A  LF ++ E G+      Y +LI G FK 
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232

Query: 259 GLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           G   +  E +E++ L G  V P++ +YN +I+  C  GK  E F+++  M+  E   ++ 
Sbjct: 233 GDILNASEIWERL-LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY+TLI GLC    +  A R+  +M   G+SP+V+ YN +++G+  AG  ++   L+  +
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +  G   +VV+YN+LIR   +      A  +   + E+      +TY +L+    ++  +
Sbjct: 352 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            KA  +    +      D + Y  +I+GLC +G + E + + + M +   +PN  V N +
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+ +      ALR  G M  KG  P + +Y++ I  L +  ++ EA  L+ +ML  G 
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 557 KPSVSLYNIL 566
           KP++  Y++L
Sbjct: 531 KPNMITYSLL 540



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 241/463 (52%), Gaps = 3/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           Y  +ID   K      A   + ++L    V P   ++N ++  + K   FD+ + ++   
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + +   D+Y++  LI G C +G+L+ A  V  ++ E G SP+VV+Y ++++G  + G I
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E    L++ + + G   T  +Y +LI GLF+N    +    +E +          TY  L
Sbjct: 342 EECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H  C  G +++   + +E  +     +   Y+++I GLC+E R+ E   +LDQM   G 
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN    N +I+GF  A + + A R F  + S G  P+VVTYN LI   SKA     A  
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           LV+EM  +G  P+ +TY++L++   +   ++ A  ++    + GF PDV  + ++IHGLC
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +++A +L++ M + K  PN V +N ++ G+ K  +  RA ++   + + G  P+I 
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           SY+ T+  LC   +  +A   LN  +  G+ P+   +NIL RA
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRA 683



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 5/287 (1%)

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           +I  Y       +   +F  M H    C   + +YN+L+  L +  +  EAE      + 
Sbjct: 84  VIKAYAKNSMPDQALDIFQRM-HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+SPN+ TYN LI   C   + DKA  L N +   G SP V +Y  LI + +K G    
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLI 462
           A  L  EM ERG+TP    Y ILID F +  D+  A E++  L++     P++ +Y V+I
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +GLC  G   E+ ++++ M + +   +   Y+ +I G C  GN   A R+  EM E G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P++  Y++ +    + G+  E   L   M K G +  VS YNIL R 
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 368



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 1/190 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+    +A     +ML  G +P   T++ L+  + +    D     + +  
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + DV    I+I G C +G +  A ++ +++++    PN+V + +L++G  K  D E
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  ++  I + G      +Y + + GL       D   F       GV P+  T+N L+
Sbjct: 622 RASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681

Query: 288 HEYCNEGKVS 297
               + G ++
Sbjct: 682 RAVLDNGALT 691


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 202/385 (52%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +++  S+G L+ G C+ G+   A ++L  +E+    P+VV+Y ++IDG CK+  +  A  
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
            + ++   G+     TY+ LICG    G     F    +M L  ++P +YTY  LI   C
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK+ E   L   M    V  NVVTY+TL+ G C    V  A+++   M    ++P+V 
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +I+G C     D+A  L  ++      P+ VTYN LI    K+G    A DL++E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             RG     +TYT L+D   ++ +++KA  ++  M++ G  P+ YTY  LI GLC    +
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           K A KLF  +       +   YN+MI G CKEG    AL +  +M + G +P+  ++   
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  L +  +  +AE LL++M+  GL
Sbjct: 594 IRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 205/389 (52%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+KG C  G++ K+    +++   GF  N V Y +L++G CK G+   A  L R I +  
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                  Y  +I GL K+ L  + ++FY +M   G+ P + TY+ LI  +C  G++   F
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAF 327

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L +EM  + +  +V TY  LI  LCKE +++EA+ LL  M   G+ PNV+TY+ L+DG+
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY 387

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  GE   A ++F+ +     +PSV +YN++I    K  +   A +L+REM  + + P+ 
Sbjct: 388 CLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  LID   +S  +  A ++   +   G   DV TY  L+ GLC   N+ +A  LF  
Sbjct: 448 VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  ++PN   Y  +I G CK      A +L   +  KG   ++ +Y+  IG LC++G 
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  + ++M   G  P    + I+ R+
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRS 596



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 213/443 (48%), Gaps = 36/443 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A+  F+ ML     P    F  +L  ++K   F        +   K +E D+ +  ILI 
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C  G +  +F VL ++ ++G+ PN +I T+L+ G C  G++                 
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEV----------------- 218

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                             K    F++K+   G   +  +Y  L++  C  G+     KL 
Sbjct: 219 ------------------KKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLL 260

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             +  R    +VV YNT+I GLCK+  V EA     +M   GI P+VITY+ LI GFC A
Sbjct: 261 RMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLA 320

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+   AF L N++     +P V TY +LI A  K G  K A +L+  M + G+ P+ VTY
Sbjct: 321 GQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTY 380

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + L+D +    ++  A +++  M ++  +P V +Y ++I+GLC   ++ EA  L   M  
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + PN V YN +I G CK G    AL L+ E++ +G   ++ +Y+S +  LC++    +
Sbjct: 441 KNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A  L  +M + G++P+   Y  L
Sbjct: 501 AIALFMKMKERGIQPNKYTYTAL 523



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 135/273 (49%), Gaps = 1/273 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y  +IDA  K     +A      M   GV+P   T+++L+  + +     +   +F +  
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +V   V S+ I+I G C+   +++A  +L ++      PN V Y SLIDG CK+G I 
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L +++   G  A   TYT L+ GL KN         + KM+  G+ P+ YTY  LI
Sbjct: 465 SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALI 524

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C   ++    KLF  +  +    +V TYN +I GLCKE  + EA  +  +M+  G  
Sbjct: 525 DGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCI 584

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           P+ +T+  +I    +  E DKA +L +++ + G
Sbjct: 585 PDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 113/239 (47%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +A    + M +   +P++I + K++           A  L  Q++  G  P +VT ++
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F   G    +  ++ ++ + G  P+ +  T L+       +++K+   +  +   G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           F  +  +YG L++GLC  G  + A KL   + +    P+ V+YN +I G CK+     A 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               EMN +G+ P++ +YS+ I   C  G+   A  LLN+M    + P V  Y IL  A
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 34/206 (16%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S+ID   KS     AL    ++   G      T+ SLL            
Sbjct: 442 NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL------------ 489

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                                  G C+  +L+KA  +  +++E G  PN   YT+LIDG 
Sbjct: 490 ----------------------DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   ++ A+ LF+ I   G     +TY V+I GL K G+  +      KM+ NG  P  
Sbjct: 528 CKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDA 587

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEM 306
            T+  +I     + +  +  KL  EM
Sbjct: 588 VTFEIIIRSLFEKDENDKAEKLLHEM 613


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/527 (30%), Positives = 261/527 (49%), Gaps = 24/527 (4%)

Query: 65  AAQTLILKIISGRITSSSFTPRSL-------LCHLTQLFPSSSNPVTKSRLYESIIDAHL 117
           AA  L + +  GR  +++   R L        C L    P   + V+ +     I+ A L
Sbjct: 32  AAPFLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYN-----IVLAAL 86

Query: 118 KSRLSD--QALFYFHQM---LDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKV 171
             R  D  QAL     M        RP + ++  ++  +  S   D+   L  S     V
Sbjct: 87  CRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGV 146

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             DV ++G LI+G C+A +L+ A E+L ++   G  PNV++Y+ L+ G C++G  +    
Sbjct: 147 RADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSK 206

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F ++  LG+      +T  I  L K G      +  + M   G+ P++ TYN LI+  C
Sbjct: 207 VFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLC 266

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPN 349
            EG V E   L +EM  + VA +VVTYNTLI GL   + +  A  LL++M      + P+
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+T+N +I G C  G   +A  +   +   G   ++VTYN LI  F +     MA +L+ 
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E+   G+ P   TY+ILI+ F +  ++++A      M + G   +++ Y  L+  LC  G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M++A  LFN M +     + V Y+ M++G CK G+   A +LL +M ++GL P+  +YS
Sbjct: 447 MMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
             I +  + G   EAE +L QM   G  P V++++ L   Y A+  I
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 225/478 (47%), Gaps = 23/478 (4%)

Query: 54  LLSKMSSHSHAAAQ------TLILK-IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKS 106
           LL+ MS  +H AA+      T++++ + + R T  +      L    Q     ++ VT  
Sbjct: 99  LLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVA----LLRSMQASGVRADVVTYG 154

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFS 165
            L   + DA   + L D AL    +M  SGV P    ++ LL    +S  + D   +F  
Sbjct: 155 TLIRGLCDA---AEL-DGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEE 210

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +R  VE DV  F   I   C+ G + KA +V + + + G  PNVV Y  LI+  CK G 
Sbjct: 211 MSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGS 270

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG---VSPSLYT 282
           +  A  L  ++ + G+     TY  LI GL    L+ DG     +  + G   V P + T
Sbjct: 271 VREALALRNEMDDKGVAPDVVTYNTLIAGL-SGVLEMDGAMGLLEEMIQGDTLVEPDVVT 329

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           +N +IH  C  G++ +   + + M  R   CN+VTYN LI G  +  +V  A  L+ ++ 
Sbjct: 330 FNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELI 389

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            +G+ P+  TY+ LI+GF    E D+A      +   G    +  Y  L+ A  + G  +
Sbjct: 390 SSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMME 449

Query: 403 MASDLVREMEER-GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            A  L  EM+   G+    V Y+ ++    +S D++ A ++   M   G +PD  TY +L
Sbjct: 450 QAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSIL 507

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           I+     G+++EA ++   M  +   P+  V++ +I GY  EG   + L L+ EM  K
Sbjct: 508 INMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 6/313 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I+   K     +AL   ++M D GV P   T+N+L+  +      D       E  
Sbjct: 258 YNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI 317

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                VE DV +F  +I G C+ G + +A  V   + E G   N+V Y  LI G  +   
Sbjct: 318 QGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHK 377

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-FYEKMQLNGVSPSLYTYN 284
           +  A  L  ++   GL     TY++LI G F    + D  E F   M   G+   L+ Y 
Sbjct: 378 VNMAMNLMSELISSGLEPDSFTYSILING-FSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+   C  G + +   LF+EM       + V Y+T++ G CK   ++ A++LL  M   
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDE 495

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P+ +TY+ LI+ F   G+ ++A R+  Q+ ++G  P V  ++ LI+ +S  G     
Sbjct: 496 GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKI 555

Query: 405 SDLVREMEERGIT 417
            DL+ EM  + + 
Sbjct: 556 LDLIHEMRAKNVA 568



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 2/215 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
           Y  +I   L+    + A+    +++ SG+ P S T++ L+    K    D+  +F  +  
Sbjct: 365 YNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMT 424

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +++ +  L+   C+ G + +A  + N+++ M    + V Y++++ G CK+GDI+
Sbjct: 425 QRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIK 483

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK L + + + GL     TY++LI    K G  ++     ++M  +G  P +  ++ LI
Sbjct: 484 AAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLI 543

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
             Y  EG++++   L  EMR + VA +     TL+
Sbjct: 544 KGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/572 (28%), Positives = 286/572 (50%), Gaps = 22/572 (3%)

Query: 9   GQALTLNLIS----RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHA 64
              LT +L+S     + K P L AF+  N      L    Q ++I +   +SK+SS    
Sbjct: 66  ADKLTPSLVSTTLLSLVKTPNL-AFNFVNHIDLYRLDFQTQCLAIAV---ISKLSS---P 118

Query: 65  AAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSR-LYESIIDAHLKSRLSD 123
              T +LK +   +TS   + R+L     +L  +     TKS  L++ ++    + R+ D
Sbjct: 119 KPVTQLLKEV---VTSRKNSIRNLF---DELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
           +A+  F+ M + G  P++ T N +L  + +    +  W+F+++  R +++ +VY+F I+I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C+ G L KA   L  +E  G  P +V Y +L+ G    G IE A+++  ++   G  
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TY  ++  +   G      E   +M+  G+ P   +YN LI    N G +   F  
Sbjct: 293 PDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            DEM  + +     TYNTLI GL  E +++ AE L+ +++  GI  + +TYN LI+G+C 
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+  KAF L +++ ++G  P+  TY  LI    +   ++ A +L  ++  +G+ P  V 
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
              L+D      +M++AF +   M     +PD  TY  L+ GLC +G  +EA +L   M 
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++P+ + YN +I GY K+G++  A  +  EM   G  P + +Y++ +  L ++ +  
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            AE LL +M   G+ P+ S +  +  A +N++
Sbjct: 590 LAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           + A  Y  +M+  G+ P   T+N+L+  +      +   +   E R K + LD  ++ IL
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ GD  KAF + +++   G  P    YTSLI   C+      A  LF K+   G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                    L+ G    G     F   ++M +  ++P   TYNCL+   C EGK  E  +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM+ R +  + ++YNTLI G  K+   + A  + D+M   G +P ++TYN L+ G  
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              E + A  L  ++KS G  P+  ++  +I A S     K  S
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSDS 627


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 234/470 (49%), Gaps = 24/470 (5%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F ++   G  P   TF++LL  +       +    F +  CK   +V +F  L+ G
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ-MCKP--NVVTFTTLMNG 188

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG---- 240
            C  G + +A  +L+++ E G  PN + Y +++DG CK GD   A  L RK+ E+     
Sbjct: 189 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKP 248

Query: 241 --LVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVS 297
             ++      T +I G   +G   +  +  ++M +   +SP + TYN LI+ +  EGK  
Sbjct: 249 NVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFF 308

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  +L+DEM  R +  + +TY+++I G CK+ R+  AE +   M   G SP++IT+N LI
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+C A   D   +L +++   G   + +TY  LI  F + G+   A DL++EM   G+ 
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-----------GFSPDVYTYGVLIHGLC 466
           P+ VT   L+D    +  ++ A EM+  MQKS           G  PDV TY +LI GL 
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G   EA +L+  M    + P+ + YN +I G CK+     A ++   M  K   PN+ 
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVV 548

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           ++++ I   C+ G+  +   L  +M + G+  +   Y  L   +R   NI
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNI 598



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 236/497 (47%), Gaps = 56/497 (11%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC----KVELDVYSF 178
           + A+  F  M+ S   P    F  L+  V++    D   +  S +R     +V  + YSF
Sbjct: 60  EDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLD---VVISLHRKMEMRRVPCNAYSF 116

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGF-------------------------------S 207
            IL+K  C    L  A     ++ ++GF                                
Sbjct: 117 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK 176

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNVV +T+L++G C+ G +  A  L  ++ E GL   Q TY  ++ G+ K G        
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236

Query: 268 YEKM-QLNGVSPSLYTY-----NCLIHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNT 320
             KM +++ + P++  +      C+I+ +C+ G+ SE  +L  EM  R +++ +VVTYN 
Sbjct: 237 LRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNA 296

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI    KE +  EAE L D+M   GI P+ ITY+ +IDGFC     D A  +F  + + G
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 356

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            SP ++T+N LI  + +A        L+ EM E G+  + +TYT LI  F +  D+  A 
Sbjct: 357 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 416

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL-----------EPN 489
           ++   M  SG  P+V T   L+ GLC  G +K+A ++F +M ++K+           EP+
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPD 476

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN++I G   EG    A  L  EM  +G+VP+  +Y+S I  LC+  +  EA  + +
Sbjct: 477 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFD 536

Query: 550 QMLKLGLKPSVSLYNIL 566
            M      P+V  +  L
Sbjct: 537 SMGSKSFSPNVVTFTTL 553



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 186/378 (49%), Gaps = 17/378 (4%)

Query: 181 LIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +I G C +G  ++A ++L + LE    SP+VV Y +LI+   K G    A+ L+ ++   
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G++ +  TY+ +I G  K          +  M   G SP + T+N LI  YC   +V +G
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL  EM    +  N +TY TLI G C+   +  A+ LL +M  +G+ PNV+T N L+DG
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 360 FCDAGETDKAFRLFNQLKS-----------NGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            CD G+   A  +F  ++            NG  P V TYN+LI      G    A +L 
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  RGI P  +TY  +I    +   +++A +M+  M    FSP+V T+  LI+G C  
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + +  +LF  M    +  N + Y  +I G+ K GN   AL +  EM   G+ P+  + 
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 529 SSTIGVLCQDGKWPEAEV 546
            + +      G W + E+
Sbjct: 621 RNML-----TGLWSKEEL 633



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 207/415 (49%), Gaps = 23/415 (5%)

Query: 54  LLSKMSSHSHAAAQTLILKI------ISGRITSSSFT-PRSLLCHLTQLFPSSSNPVTKS 106
           LL KM   SH     +I  +      I+G  +S  ++  + LL  + +    S + VT  
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT-- 293

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFS 165
             Y ++I+A +K     +A   + +ML  G+ P + T++S++    K    D    +F+ 
Sbjct: 294 --YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                   D+ +F  LI G C A  ++   ++L+++ E G   N + YT+LI G C+ GD
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----------LN 274
           +  A+ L +++   G+     T   L+ GL  NG  KD  E ++ MQ            N
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV P + TYN LI    NEGK  E  +L++EM HR +  + +TYN++I GLCK+ R+ EA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            ++ D M     SPNV+T+  LI+G+C AG  D    LF ++   G   + +TY  LI  
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           F K GN   A D+ +EM   G+ P  +T   ++      +++++A  M   +Q S
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 11/361 (3%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R K+  DV ++  LI    + G   +A E+ +++   G  P+ + Y+S+IDG CK   ++
Sbjct: 284 RKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLD 343

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      T+  LI G  +     DG +   +M   G+  +  TY  LI
Sbjct: 344 AAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 403

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA--- 344
           H +C  G ++    L  EM    V  NVVT NTL+ GLC   ++++A  +   M+ +   
Sbjct: 404 HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 463

Query: 345 --------GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
                   G+ P+V TYN LI G  + G+  +A  L+ ++   G  P  +TYN +I    
Sbjct: 464 IDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLC 523

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K      A+ +   M  +  +P+ VT+T LI+ + ++  ++   E++  M + G   +  
Sbjct: 524 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 583

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LIHG    GN+  A  +F  M  + + P+ +    M+ G   +    RA+ +L ++
Sbjct: 584 TYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643

Query: 517 N 517
            
Sbjct: 644 Q 644



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 11/276 (3%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +   LF +M       +V+ +  L+  + +  R+     L  +M+M  +  N  ++  
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+  FC   +   A   F ++   G  P+VVT++ L+           A DL  +M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VT+T L++   R   + +A  +   M + G  P+  TYG ++ G+C  G+   A 
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 476 KLFNSMWE-TKLEPNDVVYNM-----MIFGYCKEGNSYRALRLLGEMNE-KGLVPNIASY 528
            L   M E + ++PN V++ +     MI G+C  G    A +LL EM E K + P++ +Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           ++ I    ++GK+ EAE L ++ML  G+ PS   Y+
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYS 330



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 5/216 (2%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF +    + A  LF  +  +   PSV+ +  L+    + G   +   L R+ME R
Sbjct: 48  KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMR 107

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +  +  ++TIL+  F     +  A   +  + K GF P V T+  L+HGLC++  + EA
Sbjct: 108 RVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF+ M     +PN V +  ++ G C+EG    A+ LL  M E GL PN  +Y + +  
Sbjct: 168 LDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 223

Query: 535 LCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILYRA 569
           +C+ G    A  LL +M ++  +KP+V ++ +  R 
Sbjct: 224 MCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRT 259



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 61/139 (43%)

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A +++  M +S   P V  +  L+  +   G +     L   M   ++  N   + +
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++  +C       AL   G++ + G  P + ++S+ +  LC + +  EA  L +QM K  
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN 178

Query: 556 LKPSVSLYNILYRAKNNIE 574
           +    +L N L R    +E
Sbjct: 179 VVTFTTLMNGLCREGRVVE 197


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 257/528 (48%), Gaps = 9/528 (1%)

Query: 20  MAKLPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           +A L P  A + F W A R G +HT  S + +L+LL  + +  ++     L++ +IS   
Sbjct: 65  VAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANY---DKLVVSMISCSG 121

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKS-RLYESIIDAHLKSRLSDQALFYFHQMLDSGV 137
           T+     R  +  +  +  +    +  S + Y   + + L+  +++     + Q++  G+
Sbjct: 122 TAEDM--REAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGL 179

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFE 196
            P + T+N++++   K  S      +F   R   +E+D Y+   L+ G C  GDL KA  
Sbjct: 180 LPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACW 239

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +L  +  MG   N   YT LI G C+   +  A +L   + + G     HTYT+LI GL 
Sbjct: 240 LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLC 299

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K G   D     ++M   GV PS++TYN +I  YC  G++ +   +   M       +  
Sbjct: 300 KEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDW 359

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYN+LI GLC   +  EAE LL+     G SP VIT+  +I+G+C A + D A R+ + +
Sbjct: 360 TYNSLIHGLCGG-KPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIM 418

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            S+     +  Y VLI    K    K A D + E+   G++P+ V YT +ID++ +   +
Sbjct: 419 ISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKV 478

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
             A E++ L +  G  P+ +TY  LI+GL     + +A  L   M E  + P  + Y  +
Sbjct: 479 GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 538

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           I G CK+     A RL   M + GL P+  +Y+     LC+ G+  EA
Sbjct: 539 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 586



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 228/493 (46%), Gaps = 24/493 (4%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++F +  +P     +Y SIIDA+ K      AL  F      G RP + T++SL+  +
Sbjct: 450 LNEIFANGLSP--NVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           I+     K     ++     +   V ++  LI+G C+  + + AF +   +E+ G +P+ 
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567

Query: 211 VIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
             Y  L D  CK+G  E A   L +K    G+V T+ TYT L+ G  K G  +      E
Sbjct: 568 QAYNVLTDALCKSGRAEEAYSFLVKK----GVVLTKVTYTSLVDGFSKAGNTEFAAALIE 623

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM   G     +TY+ L+   C + K++E   + D+M  R V  N+V Y  +I  + KE 
Sbjct: 624 KMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEG 683

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +   A+ + ++M  +G  P+ ITY   I  +C  G  ++A  L  +++ NG +P VVTYN
Sbjct: 684 KHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYN 743

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD--------------- 434
           V I      G    A   ++ M +    P+  TY +L+  F++                 
Sbjct: 744 VFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNW 803

Query: 435 -DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             ++  +++   M K G +P   TY  +I G C    ++EA  L + M    + PN+ +Y
Sbjct: 804 IKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 863

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            M+I   C      +A   +  M E G  P++ SY   I  LC +G + +A+ L   +L+
Sbjct: 864 TMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLE 923

Query: 554 LGLKPSVSLYNIL 566
           +    +   + IL
Sbjct: 924 MDYNHNEVAWKIL 936



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 185/375 (49%), Gaps = 1/375 (0%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ +QL + G  P+ V Y ++I   CK G +  A   FR + E G+    +T   L+ G 
Sbjct: 169 KLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGY 228

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            + G  +        M L G   + Y+Y  LI   C    V E   L   M     + N+
Sbjct: 229 CRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNL 288

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY  LI GLCKE R+ +A  LLD+M   G+ P+V TYN +IDG+C +G    A  +   
Sbjct: 289 HTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTL 348

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++ NG +P   TYN LI      G    A +L+     RG +P+ +T+T +I+ + +++ 
Sbjct: 349 MEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEK 407

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A  + S+M  S    D+  YGVLI  L  K  +KEA    N ++   L PN V+Y  
Sbjct: 408 IDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTS 467

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  YCK G    AL +      +G  PN  +YSS I  L QD K  +A  L+ +M + G
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527

Query: 556 LKPSVSLYNILYRAK 570
           + P V  Y  L + +
Sbjct: 528 ITPGVITYTTLIQGQ 542



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 224/490 (45%), Gaps = 47/490 (9%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW---LFFSENRCKVELD 174
           + R+ D A     +M   GV P   T+N+++    KS               N C    D
Sbjct: 301 EGRIHD-ARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNP--D 357

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA----K 230
            +++  LI G C  G  ++A E+LN     GFSP V+ +T++I+G CK   I+ A     
Sbjct: 358 DWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKS 416

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           ++     +L L A    Y VLI  L K    K+  +   ++  NG+SP++  Y  +I  Y
Sbjct: 417 IMISSKCKLDLQA----YGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  GKV    ++F    H     N  TY++LI GL ++ ++ +A  L+ +M+  GI+P V
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP--------------------------- 383
           ITY  LI G C   E D AFRLF  ++ NG +P                           
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK 592

Query: 384 -----SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                + VTY  L+  FSKAGN++ A+ L+ +M   G      TY++L+ +  +   + +
Sbjct: 593 KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNE 652

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  +   M   G   ++  Y ++I  +  +G    A  +FN M  +  +P+ + Y + I 
Sbjct: 653 ALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFIS 712

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            YCK G    A  L+GEM   G+ P++ +Y+  I      G    A   L +M+    +P
Sbjct: 713 SYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEP 772

Query: 559 SVSLYNILYR 568
           +   Y +L +
Sbjct: 773 NYWTYWLLLK 782



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 223/506 (44%), Gaps = 59/506 (11%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFG 179
           D+A    +  +  G  P   TF +++    K+   D      S    ++CK  LD+ ++G
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCK--LDLQAYG 431

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +LI    +   L +A + LN++   G SPNVVIYTS+ID  CK G +  A  +F+     
Sbjct: 432 VLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHE 491

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY+ LI GL ++           KMQ +G++P + TY  LI   C + +    
Sbjct: 492 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F+LF+ M    +  +   YN L   LCK  R +EA   L +    G+    +TY  L+DG
Sbjct: 552 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDG 608

Query: 360 FCDAGETD-----------------------------------KAFRLFNQLKSNGQSPS 384
           F  AG T+                                   +A  + +Q+   G   +
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +V Y ++I    K G    A  +  EM   G  PS +TYT+ I S+ +   +E+A  +  
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE- 503
            M+++G +PDV TY V I+G    G M  A      M +   EPN   Y +++  + K  
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 504 -GNSY--------------RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
             N++                 +LL  M + GL P   +YSS I   C+  +  EA VLL
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848

Query: 549 NQMLKLGLKPSVSLYNILYRAKNNIE 574
           + ML   + P+  +Y +L +   +I+
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIK 874



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 1/337 (0%)

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            R+ G   L  +   Y + +  L +  + +   + Y ++   G+ P   TYN +I  YC 
Sbjct: 136 IRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCK 195

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EG ++   + F  +R   +  +  T N L+ G C+   +++A  LL  M + G   N  +
Sbjct: 196 EGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYS 255

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G C+     +A  L   +  +G SP++ TY +LIR   K G    A  L+ EM 
Sbjct: 256 YTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMP 315

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            RG+ PS  TY  +ID + +S  ++ A  + +LM+ +G +PD +TY  LIHGLC  G   
Sbjct: 316 RRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPD 374

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA +L N        P  + +  +I GYCK      ALR+   M       ++ +Y   I
Sbjct: 375 EAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLI 434

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            VL +  +  EA+  LN++   GL P+V +Y  +  A
Sbjct: 435 SVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 169/389 (43%), Gaps = 23/389 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+  ++ A     +M++ G +  S+T++ LL  + K    ++      +  
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V+ ++ ++ I+I    + G  + A  + N++   G  P+ + YT  I   CK G IE
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++   G+     TY V I G    G     F   ++M      P+ +TY  L+
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781

Query: 288 HEYC----------------NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +                 N  K+   ++L + M    +    VTY+++I G CK  R+
Sbjct: 782 KHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 841

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           +EA  LLD M    ISPN   Y  LI   CD    +KA      +   G  P + +Y+ L
Sbjct: 842 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYL 901

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I      G+   A  L  ++ E     +EV + IL D  +++  ++   ++ S M+    
Sbjct: 902 ITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHC 961

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             D  TY ++ +      N+ EAS ++ S
Sbjct: 962 RIDSETYSMVTN------NIHEASGMYES 984



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 189/437 (43%), Gaps = 26/437 (5%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK-IISGRITSSS---- 82
           AF LF    + GL    Q+ +++   L    S  +  A   L+ K ++  ++T +S    
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCK--SGRAEEAYSFLVKKGVVLTKVTYTSLVDG 608

Query: 83  FTPRSLLCHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           F+          L     N   K  S  Y  ++ A  K +  ++AL    QM   GV+  
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              +  ++  +IK    D     F+E      +    ++ + I   C+ G + +A  ++ 
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK-- 257
           ++E  G +P+VV Y   I+GC   G ++ A    +++ +        TY +L+    K  
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 258 -------------NGLQKDG-FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                        N ++ D  ++  E+M  +G++P+  TY+ +I  +C   ++ E   L 
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  ++++ N   Y  LI   C     ++A   +  M   G  P++ +Y+ LI G CD 
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDE 908

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ DKA  LF  L     + + V + +L     KAG+  + S L+  ME R       TY
Sbjct: 909 GDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETY 968

Query: 424 TILIDSFVRSDDMEKAF 440
           +++ ++   +  M +++
Sbjct: 969 SMVTNNIHEASGMYESY 985



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 13/178 (7%)

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I+A  +AG  ++A           ++P    Y + + S +R D  E   ++YS + + G 
Sbjct: 133 IQAIRRAGGKRLA-----------LSPK--CYNLALRSLLRFDMTEHMGKLYSQLVQEGL 179

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD  TY  +I   C +G++  A + F  + E+ +E +    N ++ GYC+ G+  +A  
Sbjct: 180 LPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACW 239

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LL  M   G   N  SY+  I  LC+     EA VLL  ML+ G  P++  Y +L R 
Sbjct: 240 LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRG 297


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 241/469 (51%), Gaps = 1/469 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  Y  +I    K+     A+  F +M +  V P   T+N+++   IK    + G+
Sbjct: 184 PAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGF 243

Query: 162 LFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             +S+  R  ++ +V ++ +L+ G C AG + +   VL+++      P+   Y+ L DG 
Sbjct: 244 RLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            + GD +    LF +  + G+    +T ++L+ GL K+G      E  + +  +G+  + 
Sbjct: 304 SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             YN LI+ YC  G +   F +F +M+ R +  + +TYN LI GL K  R+ EA  L+ +
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G++P+V T+N LID +  AG+ +K F + + ++  G  P+VV+Y  ++ AF K G 
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ +M  + + P    Y  +ID+++     ++AF +   M+ SG  P + TY +
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNL 543

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC +  + EA +L +S+    L P+ + YN +I   C   N+ RAL L  EM + G
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCG 603

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + P+  +Y      L   G+  E E L  QML   + P   +YNI+  A
Sbjct: 604 IKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDA 652



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 224/443 (50%), Gaps = 2/443 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCC 186
           F  ++ +  RP + T+N  +   + +   D+         C      + +S+ ++I G  
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +AG    A ++ +++ E    PN + Y ++IDG  K GD+E    L+ ++   GL     
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY VL+ GL + G   +     ++M    + P  +TY+ L   +   G       LF+E 
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + V     T + L+ GLCK+ ++ +AE +L  +  +G+    + YN LI+G+C  G+ 
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           + AF +F Q+KS    P  +TYN LI    K      A DLV EME+ G+ PS  T+  L
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID++ R+  +EK F + S MQ+ G  P+V +YG +++  C  G + EA  + + M+   +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P   VYN +I  Y + G++ +A  L  +M   G+ P+I +Y+  I  LC+  +  EAE 
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           LL+ +   GL P V  YN L  A
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISA 582



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 221/458 (48%), Gaps = 38/458 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC------------- 155
           Y ++ID H+K    +     + QML  G++P   T+N LL  + ++              
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMA 285

Query: 156 -------SFDKGWLFFSENRCK----------------VELDVYSFGILIKGCCEAGDLN 192
                   F    LF   +R                  V++  Y+  IL+ G C+ G ++
Sbjct: 286 SRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKIS 345

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA EVL  L   G     VIY +LI+G C+ GD+E A  +F+++    +     TY  LI
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K     +  +   +M+ NGV+PS+ T+N LI  Y   G++ + F +  +M+ + + 
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y +++   CK  ++ EA  +LD M +  + P    YN +ID + + G TD+AF L
Sbjct: 466 PNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML 525

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++KS+G  PS+VTYN+LI+   K      A +L+  +   G+ P  ++Y  LI +   
Sbjct: 526 AEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCY 585

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             + ++A E+   M K G  P   TY +L   L   G + E   L+  M +  + P   +
Sbjct: 586 RSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGI 645

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           YN+M+  Y K G   +   L  EM++KG+   +  Y+S
Sbjct: 646 YNIMVDAYAKCGEESKVEALRKEMSDKGIA--VGDYTS 681



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 39/310 (12%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI-SPNVITYN 354
           V   F+L    R R    +  T+N  +        + EA  +L +M   G  +PN  +YN
Sbjct: 136 VRGAFELLVAARARP---DTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYN 192

Query: 355 KLIDGF------CDA-----------------------------GETDKAFRLFNQLKSN 379
            +I G       CDA                             G+ +  FRL++Q+  +
Sbjct: 193 VVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH 252

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P+V+TYNVL+    +AG     + ++ EM  R + P   TY+IL D   R+ D +  
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             ++    K G     YT  +L++GLC  G + +A ++  ++  + L    V+YN +I G
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YC+ G+   A  +  +M  + + P+  +Y++ I  L +  +  EA  L+ +M K G+ PS
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 560 VSLYNILYRA 569
           V  +N L  A
Sbjct: 433 VETFNTLIDA 442



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI++A  K+    +A+     M    V P +  +N+++   I+  S D+ ++   + +
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V   + ++ +LIKG C+   +++A E+L+ L   G +P+V+ Y +LI  CC   + +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  L +++ + G+  +  TY +L   L   G   +    Y++M    V P    YN ++
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             Y   G+ S+   L  EM  + +A    T  T
Sbjct: 651 DAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 251/529 (47%), Gaps = 72/529 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I A  K+   + A      M D G  P   TF S++   +K  +  +      E  
Sbjct: 282 YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C V+++V     L+KG C+   L  A E  +++ E G SPN V Y  LI+ CCKNG++ 
Sbjct: 342 SCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMA 401

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L+ ++    +  T      LI G  K   +++  + +++     ++ +++TYN L+
Sbjct: 402 KAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLL 460

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EGK+SE   L+ +M  + +A   V+YN++I G C++  +  A  +   M   G+ 
Sbjct: 461 SWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLK 520

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITY+ L+DG+   G+T+ AF +F+++      PS  TYN+ I    K G +  A D+
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDM 580

Query: 408 V-----------------------------------REMEERGITPSEVTYTILIDSFVR 432
           +                                   REM E G++P+ +TYT LI+ F +
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +++ + A +M + M+  G   D+  YG LI G C K +++ AS LF+ + +  L PN V+
Sbjct: 641 NNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI 700

Query: 493 YNMMIFGY-----------------------------------CKEGNSYRALRLLGEMN 517
           YN +I GY                                    KEG    AL L  EM+
Sbjct: 701 YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMS 760

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            KG++P+I  Y+  I  LC  G+   A+ +L +M +  + P+V +YN L
Sbjct: 761 AKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 224/484 (46%), Gaps = 50/484 (10%)

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           +  R  +S     ++ C +  +F            Y S++    K     +A   + +ML
Sbjct: 432 VESREEASKLFDEAVACDIANIFT-----------YNSLLSWLCKEGKMSEATTLWQKML 480

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNK 193
           D G+ P   ++NS+++                                  G C  G+L+ 
Sbjct: 481 DKGLAPTKVSYNSMIL----------------------------------GHCRQGNLDM 506

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  V + + + G  PNV+ Y+ L+DG  KNGD E A  +F ++ +  +V +  TY + I 
Sbjct: 507 AASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKIN 566

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G   +  +  +K    G  P   TYN ++  +  EG VS     + EM    V+ 
Sbjct: 567 GLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSP 626

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NV+TY TLI G CK      A ++ ++M+  G+  ++  Y  LIDGFC   + + A  LF
Sbjct: 627 NVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLF 686

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           ++L   G SP+ V YN LI  +    N + A +L + M   GI+    TYT LID  ++ 
Sbjct: 687 SELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKE 746

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +  A ++YS M   G  PD+  Y VLI+GLC KG ++ A K+   M    + PN  +Y
Sbjct: 747 GRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIY 806

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G+ K GN   A RL  EM +KGL PN  +Y   I     +GK       L  +L 
Sbjct: 807 NALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI-----NGKIKGGNSALKSLLS 861

Query: 554 LGLK 557
           L  K
Sbjct: 862 LKFK 865



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 239/472 (50%), Gaps = 4/472 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y  +I+   K+    +A   + QM +  + P     NSL+   +K  S +
Sbjct: 381 SPNRVT----YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESRE 436

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           +    F E       +++++  L+   C+ G +++A  +  ++ + G +P  V Y S+I 
Sbjct: 437 EASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMIL 496

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C+ G+++ A  +F  + + GL     TY++L+ G FKNG  +  F  +++M    + P
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVP 556

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           S +TYN  I+  C  G+ SE   +  +   +      +TYN+++ G  KE  V  A    
Sbjct: 557 SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY 616

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M  +G+SPNVITY  LI+GFC    TD A ++ N++++ G    +  Y  LI  F K 
Sbjct: 617 REMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKK 676

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
            + + AS L  E+ + G++P+ V Y  LI  +   ++ME A  +   M   G S D+ TY
Sbjct: 677 QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             LI GL  +G +  A  L++ M    + P+ ++Y ++I G C +G    A ++L EM  
Sbjct: 737 TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
             + PN+  Y++ I    + G   EA  L N+ML  GL P+ + Y+IL   K
Sbjct: 797 DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGK 848



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 239/477 (50%), Gaps = 25/477 (5%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK------SCSF-----DKG 160
           ++ A+LK    ++A  +F +    GV+  +  ++ ++    K      +C       DKG
Sbjct: 250 MMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKG 309

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           W+  SE          +F  +I  C + G++ +A  + +++   G   NVV+ T+L+ G 
Sbjct: 310 WVP-SEG---------TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   +  A   F K+ E G    + TY VLI    KNG     ++ Y +M+   + P++
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +  N LI  +       E  KLFDE    ++A N+ TYN+L+  LCKE ++ EA  L  +
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQK 478

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G++P  ++YN +I G C  G  D A  +F+ +   G  P+V+TY++L+  + K G+
Sbjct: 479 MLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           ++ A  +   M +  I PS+ TY I I+   +     +A +M     + GF P   TY  
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           ++ G   +G++  A   +  M E+ + PN + Y  +I G+CK  N+  AL++  EM  KG
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           L  +IA+Y + I   C+      A  L +++L  GL P+  +YN L   YR  NN+E
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 1/401 (0%)

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  R   + D+  +  L+    +A  LN A    N+L E    P +     L+    KN 
Sbjct: 164 STKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKND 223

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A+ ++ K+   G+     T  +++    K+  +++  +F+ + +  GV      Y+
Sbjct: 224 MIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYS 283

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I  +C    V     L  +MR +    +  T+ ++I    K+  + EA RL D+M   
Sbjct: 284 IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSC 343

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+  NV+    L+ G+C   +   A   F+++  NG SP+ VTY VLI    K GN   A
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL  +M+ + I P+      LI  F++ +  E+A +++        + +++TY  L+  
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSW 462

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC +G M EA+ L+  M +  L P  V YN MI G+C++GN   A  +  +M + GL PN
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
           + +YS  +    ++G    A  + ++M+   + PS   YNI
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNI 563



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 35/287 (12%)

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN L++ Y    K+++    F+ +   ++   +   N L+  L K   + EA  + ++M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           + G+            G C                         T ++++RA  K  N +
Sbjct: 237 LKGVH-----------GDC------------------------FTVHIMMRANLKDNNEE 261

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A     E + RG+      Y+I+I +F ++ D+E A  +   M+  G+ P   T+  +I
Sbjct: 262 EAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVI 321

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
                +GNM EA +L + M    ++ N VV   ++ GYCK+     AL    +MNE G  
Sbjct: 322 GACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPS 381

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           PN  +Y+  I   C++G   +A  L  QM    + P+V + N L R 
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRG 428



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 105/248 (42%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N  I G    M     +  +   K      ++  YN L++ +  A + + A   FN+L  
Sbjct: 143 NRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVE 202

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           +   P +   N L+ A  K      A ++  +M  +G+     T  I++ + ++ ++ E+
Sbjct: 203 SDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEE 262

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A + +   +  G   D   Y ++I   C   +++ A  L   M +    P++  +  +I 
Sbjct: 263 AKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIG 322

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
              K+GN   ALRL  EM   G+  N+   ++ +   C+  K   A    ++M + G  P
Sbjct: 323 ACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSP 382

Query: 559 SVSLYNIL 566
           +   Y +L
Sbjct: 383 NRVTYAVL 390


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 243/490 (49%), Gaps = 12/490 (2%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           S+  HL  + P+   P++    + +++ A  K +     +  + +M   G+ P   T N 
Sbjct: 78  SVFNHLIDMQPTP--PISS---FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNI 132

Query: 147 LLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           L+         D G     E  R     +  +F  L+KG C    +++A  +L ++  MG
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKI----GELGLVATQH--TYTVLICGLFKNG 259
           + PNVV Y +L++G C  G+   A  L  ++    G  G+    +   Y  +I  L K+G
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           L   G E + +M+  G+SP +  Y+ +IH  C+ G+      LF+EM    V  NVVT+N
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            LI  LCK  +++EA  LL  M   G SP+  TYN LIDGFC  G  D A  LF  ++S 
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G     V+YNVLI  + K+G    A  L REM  + I P+ +TY  L+    R   +  A
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDA 432

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           + ++  M+    +P+  TY +L+ GLC   ++ EA +LF+ +     +P+  ++N +I G
Sbjct: 433 WNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDG 492

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            CK      A  L   ++ +GL PN+ +Y+  I  LC+ G+   A+ L   M + G  P+
Sbjct: 493 LCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPN 552

Query: 560 VSLYNILYRA 569
           +  +N L R 
Sbjct: 553 LVTFNTLMRG 562



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 225/451 (49%), Gaps = 7/451 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
           D  L    +ML  G  P + TF SL+    + S   +   L     R     +V ++G L
Sbjct: 144 DFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTL 203

Query: 182 IKGCCEAGDLNKAF----EVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           + G C  G+   A     E+LN     G +  PN+V Y ++ID  CK+G I++ K LF +
Sbjct: 204 LNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLE 263

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G+      Y+ +I G+   G  +     + +M   GV P++ T+N LI   C  GK
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E   L   M  R  + +  TYNTLI G C E R+ +A  L   M+  GI  + ++YN 
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C +G   +A +L+ ++      P+V+TYN L+    + G  + A +L  EM+   
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           +TP   TY IL+D   +++ + +A E++  ++   F P +  +  LI GLC    ++ A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +LFN +    LEPN + Y +MI G CK G    A  L   M EKG  PN+ ++++ +   
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           CQ+ +  +   LL +M +    P  S  +I+
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISIV 594



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 228/452 (50%), Gaps = 11/452 (2%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT + L + +    L SR+S +A     +M+  G RP   T+ +LL  +  + +  
Sbjct: 159 SPNTVTFTSLVKGLC---LGSRIS-EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 159 KGWLFFSEN-------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
                  E           ++ ++  +  +I   C+ G ++K  E+  +++  G SP+VV
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y+S+I G C  G  E AK LF ++ + G+     T+ VLI  L K G  ++     + M
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
              G SP  +TYN LI  +C EG++ +   LF  M  + +  + V+YN LI G CK  R+
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA++L  +M    I P VITYN L+ G    G+   A+ LF ++K +  +P   TYN+L
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +    K  +   A +L   +E     PS   +  LID   ++  +E A E+++ +   G 
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+V TY V+IHGLC  G ++ A  LF  M E    PN V +N ++ G+C+     + + 
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           LL EM EK   P+ ++ S  + +L +D K+ E
Sbjct: 575 LLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 195/385 (50%), Gaps = 1/385 (0%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAF 195
           ++P    + +++  + K    DKG   F E + + +  DV ++  +I G C  G    A 
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            + N++ + G  PNVV +  LID  CK G +E A  L + + + G      TY  LI G 
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
              G   D  + +  M+  G+     +YN LI+ YC  G++ E  KL+ EM  +E+   V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +TYNTL+ GL +E +V++A  L  +MK+  ++P   TYN L+DG C      +A  LF+ 
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           L+++   PS+  +N LI    KA   ++A +L   +   G+ P+ +TYT++I    +S  
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A +++  M++ G +P++ T+  L+ G C    M++  +L   M E    P+    ++
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKG 520
           ++    K+      L LL     +G
Sbjct: 594 VVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 43/319 (13%)

Query: 291 CNEGKV--SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
           C  G +  SE F +F+ +   +    + ++NTL+  + K  R  +   L  +M + G++P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + IT N LI+ +C+  + D    +  ++   G SP+ VT+  L++          A+ L+
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 409 REMEERGITPSEVTYTIL-----------------------------------------I 427
           R+M   G  P+ VTY  L                                         I
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           DS  +   ++K  E++  M+  G SPDV  Y  +IHG+C  G  + A  LFN M +  + 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN V +N++I   CK G    A  LL  M ++G  P+  +Y++ I   C +G+  +A  L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 548 LNQMLKLGLKPSVSLYNIL 566
              M   G++     YN+L
Sbjct: 366 FVSMESKGIETDAVSYNVL 384


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 198/386 (51%), Gaps = 1/386 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +I G C  G++ +A   + ++ E GF  +    T +I   C+   + RA   F
Sbjct: 243 DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFF 302

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+ ++GL      Y+ +I GL K G  K  FE  E+M  NG  P++YT+  LIH  C +
Sbjct: 303 HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 362

Query: 294 GKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           G     F+LF ++ R      NV TY  +I G CKE ++  AE L ++MK  G+ PN  T
Sbjct: 363 GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNT 422

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LIDG C AG   KA+ L   + + G  P+  TYN ++    K G ++ A  L+    
Sbjct: 423 YTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGF 482

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           +  I    VTYTILI    +  DM +A    + M K GF PD++ Y  LI   C +  MK
Sbjct: 483 QNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMK 542

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           ++ KLF+ + +  L P    Y  MI GYC+E     A++   +M++ G  P+  SY + I
Sbjct: 543 DSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALI 602

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKP 558
             LC++ +  EA  L + M+  GL P
Sbjct: 603 SGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 1/379 (0%)

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E G L +A +++  +   G      +   +I    +   +E A  +F ++   G+     
Sbjct: 186 EIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSC 245

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY  +I G  +NG   +   +  +M   G      T   +I  +C +  V+     F ++
Sbjct: 246 TYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKV 305

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               ++ N++ Y+++I GLCK   V++A  LL++M   G  PNV T+  LI G C  G T
Sbjct: 306 TKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT 365

Query: 367 DKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           ++AFRLF +L +S+   P+V TY  +I  + K      A  L   M+E+G+ P+  TYT 
Sbjct: 366 ERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 425

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID   ++ +  KA+E+  LM   GF P+  TY  ++ GLC +G  +EA KL N+ ++ +
Sbjct: 426 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 485

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +E + V Y ++I   CK  +  +AL  L +M + G  P+I  Y++ I   C+     ++E
Sbjct: 486 IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSE 545

Query: 546 VLLNQMLKLGLKPSVSLYN 564
            L ++++KLGL P+   Y 
Sbjct: 546 KLFDEVIKLGLAPTKETYT 564



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 220/446 (49%), Gaps = 5/446 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y+ II  + ++    +A  +  +M++ G    + T   ++  F  KS      W F    
Sbjct: 247 YKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVT 306

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  ++ ++  +I G C+ G + +AFE+L ++ + G+ PNV  +TSLI G CK G  E
Sbjct: 307 KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTE 366

Query: 228 RAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           RA  LF K I         HTYT +I G  K          +E+M+  G+ P+  TY  L
Sbjct: 367 RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTL 426

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C  G  S+ ++L + M +     N  TYN+++ GLCK  R +EA +LL+      I
Sbjct: 427 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 486

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             + +TY  LI   C   + ++A    N++   G  P +  Y  LI AF +    K +  
Sbjct: 487 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 546

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  E+ + G+ P++ TYT +I  + R   +  A + +  M   G +PD  +YG LI GLC
Sbjct: 547 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 606

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +  + EA +L+++M +  L P +V    + + YCK  +   A+ +L  +N+K  +  + 
Sbjct: 607 KESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTV- 665

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQML 552
              + I  LC + K   A +  +++L
Sbjct: 666 --HTLIRKLCCEKKVALAALFFHKLL 689



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 1/347 (0%)

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A  +   +   GLV T      +I    +  L +     +++M   GV P   TY
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +I  YC  G V E  +   EM  R    +  T   +I   C++  V  A     ++  
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+SPN+I Y+ +I G C  G   +AF L  ++  NG  P+V T+  LI    K G ++ 
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 404 ASDL-VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           A  L ++ +      P+  TYT +I  + + + + +A  ++  M++ G  P+  TY  LI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C  GN  +A +L   M      PN   YN ++ G CK G +  A +LL    +  + 
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  +Y+  I   C+     +A V LN+M K+G +P + LY  L  A
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 143/282 (50%), Gaps = 3/282 (1%)

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR-VQEAERLLDQMKM 343
           C++  +   GK+ E   +  +MR++ +       N +I  +  EMR V+ A  + D+M  
Sbjct: 179 CMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIIL-VAAEMRLVEYAGNVFDEMSA 237

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ P+  TY  +I G+C  G   +A R   ++   G      T  ++I AF +      
Sbjct: 238 RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 297

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A     ++ + G++P+ + Y+ +I    +   +++AFE+   M K+G+ P+VYT+  LIH
Sbjct: 298 AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 357

Query: 464 GLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           GLC KG  + A +LF  +  +   +PN   Y  MI GYCKE    RA  L   M E+GLV
Sbjct: 358 GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 417

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           PN  +Y++ I   C+ G + +A  L+  M   G  P+   YN
Sbjct: 418 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 459



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 18/322 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----- 163
           Y ++I  + K     +A   F +M + G+ P +NT+ +L+    K+ +F K +       
Sbjct: 388 YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 447

Query: 164 ---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
              F  N C       ++  ++ G C+ G   +AF++LN   +     + V YT LI   
Sbjct: 448 NEGFFPNTC-------TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK  D+ +A +   K+ ++G     H YT LI    +  + KD  + ++++   G++P+ 
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  +I  YC E KVS   K F +M     A + ++Y  LI GLCKE R+ EA +L D 
Sbjct: 561 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 620

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G+SP  +T   L   +C   +   A  +  +L    +   + T + LIR       
Sbjct: 621 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKK 677

Query: 401 SKMASDLVREMEERGITPSEVT 422
             +A+    ++ ++ +    VT
Sbjct: 678 VALAALFFHKLLDKEVNVDRVT 699


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 230/427 (53%), Gaps = 2/427 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G+ P   T+N+L+  + K+    +   +  +   +  E D +++  +I G C+ G +  A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++L      GF P+   Y SLI+G C++GDI+RA  +F +  E GL         L+ G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L + GL     +   +M  NG SP ++TYN +I+  C  G VS+   L  +   +    +
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V T+NTLI G CK++++  A  ++D+M   G+SP+VITYN +++G C AG+ +     F 
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +   G  P+++TYN+L  +F KA   + A +L+ EM+ +G+TP  V +  L+  F  + 
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579

Query: 435 DMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D++ A++++  + ++  FS  + TY ++I+    K NM  A KLFN M E    P+   Y
Sbjct: 580 DLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            +MI G+CK GN       L    EKGL+P++ ++   +  LC   +  EA  +++ M+ 
Sbjct: 640 RVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVH 699

Query: 554 LGLKPSV 560
            G+ P V
Sbjct: 700 KGIVPEV 706



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 219/482 (45%), Gaps = 37/482 (7%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
           +A+  F +M      P   ++N+++  +++   FD+    +   R K +  DVY+F I +
Sbjct: 94  EAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRM 153

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           K  C     + A  +LN +   G   + V Y ++I G  +      A  LF ++  LG+ 
Sbjct: 154 KSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGIC 213

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                +  LI  L + G  ++      K+   GVSP+L+T N  I  +C    ++E  +L
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC- 361
            D +  R +  +V+TYNTLICGLCK  +V EAE  L +M   G  P+  TYN +IDG+C 
Sbjct: 274 LDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332

Query: 362 ----------------------------------DAGETDKAFRLFNQLKSNGQSPSVVT 387
                                               G+ D+A  +FN+    G  P++V 
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            N L++  S+ G    A  L+ EM E G +P   TY ++I+   +   +  A  +     
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI 452

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  PDV+T+  LI G C K  +  A ++ + MW   + P+ + YN ++ G CK G   
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
             +     M EKG VPNI +Y+      C+  K  EA  L+ +M   GL P V  +  L 
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572

Query: 568 RA 569
           + 
Sbjct: 573 KG 574



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 258/633 (40%), Gaps = 101/633 (15%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS-- 81
           PLKA  +FN   ++ G +HT     +  + ++ K+  H    A   +L      I +   
Sbjct: 20  PLKALEIFNSVKKEDGFKHT----LLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL 75

Query: 82  ---------SFTPRSLLCHLTQLFPS----SSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
                    ++  +  +     +F      +  P  +S  Y +I++  ++ R  DQA   
Sbjct: 76  EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQS--YNAIMNILVEYRYFDQAHKV 133

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKS-------------------------CSFDKGWLF 163
           + +M D G+ P   TF   +    ++                         C+   G  F
Sbjct: 134 YMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGG--F 191

Query: 164 FSENRCKVEL--------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           + EN  +VE               D+ +F  LI   C  G + ++  +LN++ + G SPN
Sbjct: 192 YEENH-RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +      I G C+   +  A  L   +G  GL     TY  LICGL KN    +   +  
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM   G  P  +TYN +I  YC  G +    ++  +   +    +  TY +LI GLC++ 
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +  A  + ++    G+ PN++  N L+ G    G   +A +L N++  NG SP + TYN
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           ++I    K G    A +LV +   +G  P   T+  LID + +   ++ A E+   M   
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G SPDV TY  +++GLC  G  ++    F  M E    PN + YN++   +CK      A
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA------------------------- 544
           L L+ EM  KGL P++ ++ + +   C +G    A                         
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMIN 609

Query: 545 -----------EVLLNQMLKLGLKPSVSLYNIL 566
                      E L N+M + G  P    Y ++
Sbjct: 610 AFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVM 642



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 196/385 (50%), Gaps = 2/385 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SIID + K  +   A          G  P  +T+ SL+  + +    D+    F+E  
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM 382

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ ++     L+KG  + G + +A +++N++ E G SP++  Y  +I+G CK G + 
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L       G +    T+  LI G  K     +  E  ++M  +GVSP + TYN ++
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK  +    F  M  +    N++TYN L    CK  +V+EA  L+++M+  G++
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASD 406
           P+V+ +  L+ GFCD G+ D A++LF ++    + S ++ TYN++I AF+   N  MA  
Sbjct: 563 PDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEK 622

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M E G +P   TY ++ID F ++ ++   +    +  + G  P + T+G +++ LC
Sbjct: 623 LFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLC 682

Query: 467 MKGNMKEASKLFNSMWETKLEPNDV 491
           +K  + EA  + + M    + P  V
Sbjct: 683 LKRRVHEAVGIIHLMVHKGIVPEVV 707


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 225/452 (49%), Gaps = 1/452 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y S++     S  +D AL    +M   GV P   T+ +L+    K    D+ + L+    
Sbjct: 225 YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMV 284

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  DV +   L+ G C  G  ++A+ +  +++++G +PN V Y +LID   K     
Sbjct: 285 RSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGS 344

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  L  ++   G+V     YT L+  L K G  ++  +     Q + ++P+  TY  L+
Sbjct: 345 ESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLV 404

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +    ++  +M  + V  NVVT++++I GL K   + +A   + +MK +GI+
Sbjct: 405 DAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIA 464

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  LIDGF      + A  ++  +   G   +    + L+    K GN + A  L
Sbjct: 465 PNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEAL 524

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M+ERG+    V YT L+D   ++ +M  AF++   + +   SPD   Y V I+ LC 
Sbjct: 525 FKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCT 584

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   EA      M  T LEP+   YN MI   C+EG + +AL+LL EM    + PN+ +
Sbjct: 585 LGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLIT 644

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           Y++ +  L + G   +A+ LLN+M   G  P+
Sbjct: 645 YTTLVVGLLEAGVVKKAKFLLNEMASAGFAPT 676



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 245/506 (48%), Gaps = 40/506 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++DAH ++   D A     QM +  V P   TF+S++  ++K     K   +  + +
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMK 459

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +V ++G LI G  +      A +V   +   G   N  +  SL++G  KNG+IE
Sbjct: 460 DSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIE 519

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE--------------------- 266
            A+ LF+ + E GL+     YT L+ GLFK G     F+                     
Sbjct: 520 GAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579

Query: 267 --------------FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                         F ++M+  G+ P   TYN +I   C EGK S+  KL  EM+   + 
Sbjct: 580 NCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIK 639

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N++TY TL+ GL +   V++A+ LL++M  AG +P  +T+ +++     +   D    +
Sbjct: 640 PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              +   G    +  YN L+      G ++ A+ ++ EM  RGI P  +T+  LI    +
Sbjct: 700 HELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCK 759

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           S  ++ AF +Y+ M   G SP++ T+  L+ GL   G + EA  + + M +  LEPN++ 
Sbjct: 760 SSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLT 819

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y++++ GY K+ N   ALRL  EM  KG +P  ++Y+S +    + G   +A+ L ++M 
Sbjct: 820 YDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMK 879

Query: 553 KLGLKPSVSLYNILY----RAKNNIE 574
           + G+  + S Y+IL     + +N IE
Sbjct: 880 RRGVLHTSSTYDILLNGWSKLRNGIE 905



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 208/400 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V LDV  +  L+ G   +GD + A EV+ +++  G  PNVV YT+LI   CK   ++ A 
Sbjct: 218 VALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAF 277

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L+  +   G++    T + L+ GL ++G   + +  + +M   GV+P+  TY  LI   
Sbjct: 278 SLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSL 337

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
               + SE   L  EM  R V  ++V Y  L+  L KE +++EA+ +L   +   I+PN 
Sbjct: 338 AKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNF 397

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  L+D  C AG  D A ++  Q++     P+VVT++ +I    K G    A+D +R+
Sbjct: 398 VTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRK 457

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M++ GI P+ VTY  LID F +    E A ++Y  M   G   + +    L++GL   GN
Sbjct: 458 MKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGN 517

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++ A  LF  M E  L  + V Y  ++ G  K GN   A ++  E+ EK L P+   Y+ 
Sbjct: 518 IEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNV 577

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            I  LC  GK+ EA+  L +M   GL+P  + YN +  A+
Sbjct: 578 FINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/573 (23%), Positives = 245/573 (42%), Gaps = 109/573 (19%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I  + K +  D+A   +  M+ SGV P   T ++L+  + +   F + +  F E  
Sbjct: 260 YTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMD 319

Query: 167 ---------NRCK-------------------------VELDVYSFGILIKGCCEAGDLN 192
                      C                          V +D+  +  L+    + G + 
Sbjct: 320 KIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIE 379

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A +VL   +    +PN V YT L+D  C+ G+I+ A+ +  ++ E  ++    T++ +I
Sbjct: 380 EAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSII 439

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G      ++  KM+ +G++P++ TY  LI  +           ++ +M H  V 
Sbjct: 440 NGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE 499

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--------------------------- 345
            N    ++L+ GL K   ++ AE L   M   G                           
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559

Query: 346 --------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
                   +SP+ + YN  I+  C  G+  +A     ++++ G  P   TYN +I A  +
Sbjct: 560 GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR 619

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP---- 453
            G +  A  L++EM+   I P+ +TYT L+   + +  ++KA  + + M  +GF+P    
Sbjct: 620 EGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679

Query: 454 -------------------------------DVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
                                          D+  Y  L+H LC  G  + A+ + + M 
Sbjct: 680 HQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML 739

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              + P+ + +N +I G+CK  +   A  +  +M  +GL PNIA++++ +G L   G+  
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL---YRAKNN 572
           EA+ +L+ M K+GL+P+   Y+IL   Y  K+N
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 217/482 (45%), Gaps = 36/482 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID   K +  + AL  +  ML  GV   +   +SL+  + K+ + +     F + +
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              + LD  ++  L+ G  + G++  AF+V  +L E   SP+ V+Y   I+  C  G   
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK   +++   GL   Q TY  +I    + G      +  ++M+ N + P+L TY  L+
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 288 HEYCNEGKVSEGFKLFDEM----------RHREV--AC---------------------- 313
                 G V +   L +EM           H+ V  AC                      
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++  YNTL+  LC     + A  +LD+M   GI+P+ IT+N LI G C +   D AF +
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + Q+   G SP++ T+N L+     AG    A  ++ +M++ G+ P+ +TY IL+  + +
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAK 829

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +  +A  +Y  M   GF P   TY  L+      G M +A +LF+ M    +      
Sbjct: 830 KSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSST 889

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y++++ G+ K  N      LL +M E G  P+  + SS      + G   EA  LL  + 
Sbjct: 890 YDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLF 949

Query: 553 KL 554
           K+
Sbjct: 950 KV 951



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 150/296 (50%), Gaps = 2/296 (0%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V+    +YN  +     +G       +  EM  R V+ + VT +T + GLC+   V EA 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 336 RLLDQM-KMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            L + + +  GI   +V+ +N LIDG+C   +   A  +  ++ + G +  VV YN L+ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F  +G++  A ++V  M+  G+ P+ VTYT LI  + +   M++AF +Y  M +SG  P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           DV T   L+ GLC  G   EA  LF  M +  + PN V Y  +I    K      +L LL
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL 350

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GEM  +G+V ++  Y++ +  L ++GK  EA+ +L       + P+   Y +L  A
Sbjct: 351 GEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 127/321 (39%), Gaps = 50/321 (15%)

Query: 72  KIISGRITSSSFTPRSLLCH-LTQLFPSSSNPVTKSRLYESIIDAHLKSR---------- 120
           K +   + S+ F P SL    + Q    S  P     ++E ++ A L +           
Sbjct: 662 KFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHV 721

Query: 121 -----LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDV 175
                ++  A     +ML  G+ P + TFN+L++                          
Sbjct: 722 LCCHGMARNATVVLDEMLTRGIAPDTITFNALIL-------------------------- 755

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
                   G C++  L+ AF +  Q+   G SPN+  + +L+ G    G I  A  +   
Sbjct: 756 --------GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSD 807

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + ++GL     TY +L+ G  K   + +    Y +M   G  P   TYN L+ ++   G 
Sbjct: 808 MKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGM 867

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +++  +LF EM+ R V     TY+ L+ G  K     E   LL  MK  G  P+  T + 
Sbjct: 868 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISS 927

Query: 356 LIDGFCDAGETDKAFRLFNQL 376
           +   F   G T +A RL   L
Sbjct: 928 MSRAFSRPGMTGEARRLLKTL 948


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 252/501 (50%), Gaps = 50/501 (9%)

Query: 108 LYESIIDAHL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-- 164
           +Y ++I   L KSR  D A+    +M + G+ P +  +NSL+I + K+   D+   F   
Sbjct: 457 IYTTLIKTFLQKSRFGD-AVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515

Query: 165 -SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             EN  K   D +++G  I G  EAG+   A + + ++ E G  PN V+ T LI+  CK 
Sbjct: 516 MVENGFKP--DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A   FR + E G++    TYTVL+ GL KNG   D  E + +M+  G++P +++Y
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI  +   G + +   +FDEM    +  NV+ YN L+ G C+   +++A+ LLD+M  
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY--------------- 388
            G  PN +TY  +IDG+C +G+  +AF+LF+++K  G  P    Y               
Sbjct: 694 KGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753

Query: 389 -------------------NVLIRAFSKAGNSKMASDLVREMEERGIT----PSEVTYTI 425
                              N LI    K G +++ +D++  + +        P++VTY I
Sbjct: 754 AITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +ID   +  ++E A E++  MQK+   P V TY  L++G    G   E   +F+ +    
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN-----IASYSSTIGVLCQDGK 540
           +EP++++Y+++I  + KEG + +AL LL +M  K  V +     I++  + +    + G+
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933

Query: 541 WPEAEVLLNQMLKLGLKPSVS 561
              AE ++  M++L   P  S
Sbjct: 934 MEVAEKVVENMVRLKYIPDSS 954



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 266/590 (45%), Gaps = 78/590 (13%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LL +M+S    A       +I G +   +    + L H       S +P+    +Y+  I
Sbjct: 302 LLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPM----MYDYFI 357

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVE 172
               K    ++A   F  M+  GV P +  + SL+    +  +  KG+    E  +  + 
Sbjct: 358 CVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIV 417

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +  Y++G  +KG C +GDL+ A+ ++ ++   G  PNVVIYT+LI    +      A  +
Sbjct: 418 ISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRV 477

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC------- 285
            +++ E G+      Y  LI GL K     +   F  +M  NG  P  +TY         
Sbjct: 478 LKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIE 537

Query: 286 ----------------------------LIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
                                       LI+EYC +GKV E    F  M  + +  +  T
Sbjct: 538 AGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKT 597

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  L+ GL K  +V +AE +  +M+  GI+P+V +Y  LIDGF   G   KA  +F+++ 
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G + +V+ YN+L+  F ++G  + A +L+ EM  +G  P+ VTY  +ID + +S D+ 
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA--------------SKLFNSM-- 481
           +AF+++  M+  G  PD + Y  L+ G C   +++ A              S  FN++  
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALIN 777

Query: 482 WETKL----------------------EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           W  K                       +PNDV YN+MI   CKEGN   A  L   M + 
Sbjct: 778 WVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKA 837

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L+P + +Y+S +    + G+  E   + ++++  G++P   +Y+++  A
Sbjct: 838 NLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINA 887



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 224/480 (46%), Gaps = 36/480 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGIL 181
           D+AL     M   G+ P   ++N L+  + K     D   L    N   +  D  ++ IL
Sbjct: 262 DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSIL 321

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G  +  + + A  +++++   GFS + ++Y   I    K G +E+AK LF  +   G+
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 Y  LI G F+    + G+E   +++   +  S YTY   +   C+ G +   + 
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +  EM       NVV Y TLI    ++ R  +A R+L +M+  GI+P+   YN LI G  
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A + D+A     ++  NG  P   TY   I  + +AG    A   V+EM E G+ P++V
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 422 -----------------------------------TYTILIDSFVRSDDMEKAFEMYSLM 446
                                              TYT+L++  V++  +  A E++  M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +  G +PDV++YG LI G    GNM++AS +F+ M +  L  N ++YNM++ G+C+ G  
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A  LL EM+ KG  PN  +Y + I   C+ G   EA  L ++M   GL P   +Y  L
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 248/566 (43%), Gaps = 30/566 (5%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P K  S FN    Q +  T Q +     L L   +  S   A ++++++I  +   +   
Sbjct: 77  PSKLLSFFNLVDSQKV--TEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVW 134

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSN 142
              + C L +    S + V    L+  +ID +++    D+A+F F     LD  + P   
Sbjct: 135 SSIVRC-LREFVGKSDDRVL---LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLA 190

Query: 143 TFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
             N LL  ++K    D  W ++       V  DV S+ +LI   C  G++  A +VL + 
Sbjct: 191 RCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKT 250

Query: 202 EE---------------------MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           EE                      G  P+   Y  LIDG CK   +E AK L  ++  +G
Sbjct: 251 EEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVG 310

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L A    Y++LI GL K            +M  +G S     Y+  I     EG + +  
Sbjct: 311 LFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK 370

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LFD M    V      Y +LI G  +E  V++   LL ++K   I  +  TY   + G 
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM 430

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C +G+ D A+ +  ++ ++G  P+VV Y  LI+ F +      A  +++EM E+GI P  
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT 490

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             Y  LI    ++  M++A      M ++GF PD +TYG  I G    G    A K    
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  + PN V+   +I  YCK+G    A      M E+G++ +  +Y+  +  L ++GK
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +AE + ++M   G+ P V  Y  L
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTL 636



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 193/412 (46%), Gaps = 44/412 (10%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +I+ + K     +A   F  M++ G+   + T+  L+  ++K+   +     F E 
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R K +  DV+S+G LI G  + G++ KA  + +++ + G + NV+IY  L+ G C++G+I
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+AK L  ++   G      TY  +I G  K+G   + F+ +++M+L G+ P  + Y  L
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 287 IHEYCNEGKVSEGFKLFD------------------------------EMRHREV----- 311
           +   C    V     +F+                              +M +R +     
Sbjct: 742 VDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFD 801

Query: 312 ---ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                N VTYN +I  LCKE  ++ A+ L   M+ A + P VITY  L++G+   G   +
Sbjct: 802 KFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSE 861

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-----EERGITPSEVTY 423
            F +F+++ + G  P  + Y+V+I AF K G +  A  L+ +M      + G   S  T 
Sbjct: 862 MFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTC 921

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             L+  F +  +ME A ++   M +  + PD  T   LI+  C+  N + A+
Sbjct: 922 RALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAA 973



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 148/342 (43%), Gaps = 44/342 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K     +A   F +M+ +G+      +N LL    +S   +K      E  
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    +  ++  +I G C++GDL +AF++ ++++  G  P+  +YT+L+DGCC+  D+E
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752

Query: 228 RAKMLFR---------------------KIGELGLVA-----------------TQHTYT 249
           RA  +F                      K G+  L                      TY 
Sbjct: 753 RAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYN 812

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           ++I  L K G  +   E +  MQ   + P++ TY  L++ Y   G+ SE F +FDE+   
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMA---GISPNVITYNKLIDGFCDAG 364
            +  + + Y+ +I    KE    +A  LLDQM  K A   G   ++ T   L+ GF   G
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 932

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           E + A ++   +      P   T   LI     + N +MA+D
Sbjct: 933 EMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 41/410 (10%)

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN- 223
           S+   + +LD +SF  L    C  G + KA  V+ ++ E  + P   +++S++  C +  
Sbjct: 89  SQKVTEQKLDSFSF--LALDLCNFGSIEKAHSVVIRMIERKW-PVAEVWSSIVR-CLREF 144

Query: 224 -GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLN-GVSPSL 280
            G  +   +LF                +LI G  + G L +  F F     L+  + PSL
Sbjct: 145 VGKSDDRVLLF---------------GILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSL 189

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL-- 338
              N L+       ++   + ++  M  R V  +V +Y  LI   C++  VQ A+ +L  
Sbjct: 190 ARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK 249

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            + ++   + NV                D+A  L   +   G  PS  +YN+LI    K 
Sbjct: 250 TEEELGTATLNV----------------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQ 293

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
              + A  L+ EM   G+    V Y+ILID  ++  + + A  +   M   GFS D   Y
Sbjct: 294 KRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMY 353

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              I  +  +G M++A  LF+ M    + P    Y  +I G+ +E N  +   LL E+ +
Sbjct: 354 DYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKK 413

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           + +V +  +Y + +  +C  G    A  ++ +M   G +P+V +Y  L +
Sbjct: 414 RNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIK 463


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 222/429 (51%), Gaps = 1/429 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F ++L  G  P + TFN+L+  +       +   F  +   +   LD  S+G LI G C+
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G +  A ++L +++     PN V+Y  +ID  CK   +  A  L+ ++    +     T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  LI G           + + KM+   ++P++YT+N L+  +C EGKV++   +   M 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
             ++  +VVTYN+L+ G C   +V +A+ + D M   G+  NV  Y  +++GFC     D
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF +++     P+VVTY+ LI    K G    A  LV EM +RG  P+ VTY+ ++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  ++  ++KA  + + ++  G  PD+YTY +LI GLC  G +++A  +F  +      
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYN 478

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            +   Y +MI G+C +G   +AL LL +M + G +PN  +Y   I  L +  +   AE L
Sbjct: 479 LDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKL 538

Query: 548 LNQMLKLGL 556
           L +M+  GL
Sbjct: 539 LREMIVRGL 547



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 14/494 (2%)

Query: 78  ITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF-HQMLDSG 136
           +  S+FTP     +   LFPSS       RL+  +   H K    +  +  F H +L   
Sbjct: 9   VVISNFTPNP---NFIGLFPSSI------RLFSQL---HHKQDEENNLISSFNHLLLHKN 56

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAF 195
             P +  FN +L  ++K+           +     +E D ++F ILI    + G  + +F
Sbjct: 57  PTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSF 116

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            +  ++ + G+ P  + + +LI G C  G I +A     K+   G    Q +Y  LI GL
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGL 176

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K G      +  +++    V P+   YN +I   C    V++ F L+ +M  + +  +V
Sbjct: 177 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TYN LI G     ++  A  L ++MK   I+PNV T+N L+DGFC  G+ + A  +   
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  +   P VVTYN L+  +        A D+   M   G+  +   YT +++ F +   
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A  ++  M+     P+V TY  LI GLC  G +  A KL + M +    PN V Y+ 
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++   CK  +  +A+ LL  + ++G+ P++ +Y+  I  LCQ G+  +A+ +   +L  G
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 556 LKPSVSLYNILYRA 569
               V  Y ++ + 
Sbjct: 477 YNLDVYAYTVMIQG 490


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 198/386 (51%), Gaps = 1/386 (0%)

Query: 174  DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            D  ++  +I G C  G++ +A   + ++ E GF  +    T +I   C+   + RA   F
Sbjct: 830  DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFF 889

Query: 234  RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             K+ ++GL      Y+ +I GL K G  K  FE  E+M  NG  P++YT+  LIH  C +
Sbjct: 890  HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 949

Query: 294  GKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G     F+LF ++ R      NV TY  +I G CKE ++  AE L ++MK  G+ PN  T
Sbjct: 950  GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNT 1009

Query: 353  YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            Y  LIDG C AG   KA+ L   + + G  P+  TYN ++    K G ++ A  L+    
Sbjct: 1010 YTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGF 1069

Query: 413  ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +  I    VTYTILI    +  DM +A    + M K GF PD++ Y  LI   C +  MK
Sbjct: 1070 QNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMK 1129

Query: 473  EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            ++ KLF+ + +  L P    Y  MI GYC+E     A++   +M++ G  P+  SY + I
Sbjct: 1130 DSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALI 1189

Query: 533  GVLCQDGKWPEAEVLLNQMLKLGLKP 558
              LC++ +  EA  L + M+  GL P
Sbjct: 1190 SGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 185/371 (49%), Gaps = 36/371 (9%)

Query: 194  AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            A  V +++   G  P+   Y  +I G C+NG++  A     ++ E G V    T T++I 
Sbjct: 815  AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874

Query: 254  GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
               +  L      F+ K+   G+SP                                   
Sbjct: 875  AFCEKSLVNRAVWFFHKVTKMGLSP----------------------------------- 899

Query: 314  NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
            N++ Y+++I GLCK   V++A  LL++M   G  PNV T+  LI G C  G T++AFRLF
Sbjct: 900  NLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 959

Query: 374  NQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             +L +S+   P+V TY  +I  + K      A  L   M+E+G+ P+  TYT LID   +
Sbjct: 960  LKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCK 1019

Query: 433  SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
            + +  KA+E+  LM   GF P+  TY  ++ GLC +G  +EA KL N+ ++ ++E + V 
Sbjct: 1020 AGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVT 1079

Query: 493  YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            Y ++I   CK  +  +AL  L +M + G  P+I  Y++ I   C+     ++E L ++++
Sbjct: 1080 YTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVI 1139

Query: 553  KLGLKPSVSLY 563
            KLGL P+   Y
Sbjct: 1140 KLGLAPTKETY 1150



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 220/446 (49%), Gaps = 5/446 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
            Y+ II  + ++    +A  +  +M++ G    + T   ++  F  KS      W F    
Sbjct: 834  YKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVT 893

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  +  ++ ++  +I G C+ G + +AFE+L ++ + G+ PNV  +TSLI G CK G  E
Sbjct: 894  KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTE 953

Query: 228  RAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA  LF K I         HTYT +I G  K          +E+M+  G+ P+  TY  L
Sbjct: 954  RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTL 1013

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I  +C  G  S+ ++L + M +     N  TYN+++ GLCK  R +EA +LL+      I
Sbjct: 1014 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 1073

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              + +TY  LI   C   + ++A    N++   G  P +  Y  LI AF +    K +  
Sbjct: 1074 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 1133

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L  E+ + G+ P++ TYT +I  + R   +  A + +  M   G +PD  +YG LI GLC
Sbjct: 1134 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 1193

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             +  + EA +L+++M +  L P +V    + + YCK  +   A+ +L  +N+K  +  + 
Sbjct: 1194 KESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTV- 1252

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQML 552
               + I  LC + K   A +  +++L
Sbjct: 1253 --HTLIRKLCCEKKVALAALFFHKLL 1276



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 1/347 (0%)

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G ++ A  +   +   GLV T      +I    +  L +     +++M   GV P   TY
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              +I  YC  G V E  +   EM  R    +  T   +I   C++  V  A     ++  
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             G+SPN+I Y+ +I G C  G   +AF L  ++  NG  P+V T+  LI    K G ++ 
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 404  ASDL-VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L ++ +      P+  TYT +I  + + + + +A  ++  M++ G  P+  TY  LI
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 463  HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             G C  GN  +A +L   M      PN   YN ++ G CK G +  A +LL    +  + 
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 523  PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +  +Y+  I   C+     +A V LN+M K+G +P + LY  L  A
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 143/282 (50%), Gaps = 3/282 (1%)

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR-VQEAERLLDQMKM 343
            C++  +   GK+ E   +  +MR++ +       N +I  +  EMR V+ A  + D+M  
Sbjct: 766  CMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIIL-VAAEMRLVEYAGNVFDEMSA 824

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             G+ P+  TY  +I G+C  G   +A R   ++   G      T  ++I AF +      
Sbjct: 825  RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 884

Query: 404  ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            A     ++ + G++P+ + Y+ +I    +   +++AFE+   M K+G+ P+VYT+  LIH
Sbjct: 885  AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 944

Query: 464  GLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            GLC KG  + A +LF  +  +   +PN   Y  MI GYCKE    RA  L   M E+GLV
Sbjct: 945  GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 1004

Query: 523  PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            PN  +Y++ I   C+ G + +A  L+  M   G  P+   YN
Sbjct: 1005 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 1046



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 18/334 (5%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----- 163
            Y ++I  + K     +A   F +M + G+ P +NT+ +L+    K+ +F K +       
Sbjct: 975  YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 1034

Query: 164  ---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               F  N C       ++  ++ G C+ G   +AF++LN   +     + V YT LI   
Sbjct: 1035 NEGFFPNTC-------TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087

Query: 221  CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            CK  D+ +A +   K+ ++G     H YT LI    +  + KD  + ++++   G++P+ 
Sbjct: 1088 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147

Query: 281  YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             TY  +I  YC E KVS   K F +M     A + ++Y  LI GLCKE R+ EA +L D 
Sbjct: 1148 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 1207

Query: 341  MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            M   G+SP  +T   L   +C   +   A  +  +L    +   + T + LIR       
Sbjct: 1208 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKK 1264

Query: 401  SKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
              +A+    ++ ++ +    VT      + + S+
Sbjct: 1265 VALAALFFHKLLDKEVNVDRVTLAAFNTACIESN 1298


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 208/391 (53%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y++  +I   C+ G + +A  VL ++   G +P+ VIYT+LIDG CK G++  A  LF +
Sbjct: 224 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +  +     TYT +ICGL + G   +  + + +M    + P   TY  LI  YC EGK
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E F L ++M    +  N+VTY  L  GLCK   V  A  LL +M   G+  N+ TYN 
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L++G C AG  D+A +L   ++  G  P  VTY  L+ A+ K+     A +L+R+M +R 
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ VT+ +L++ F  S  +E   ++   M + G  P+  TY  LI   C++ NM+  +
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +++  M    + P+   YN++I G+CK  N   A  L  +M  KG    ++SY++ I   
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  K+ EA  L  QM + GL     +YNI 
Sbjct: 584 YKRKKFLEARELFEQMRREGLVADREIYNIF 614



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 216/443 (48%), Gaps = 12/443 (2%)

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCC 186
           F+ +  LD GV      F+ +L + +   S D   LF S     +  D+    I +KG  
Sbjct: 152 FWVNPNLDVGVSFARKLFDKMLNYGL-LISVDSCNLFISH----LSEDLDGIKIALKG-- 204

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
                    +++ +++  G  PN   Y  +I   CK G +  A+ + R++   G+     
Sbjct: 205 -----EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 259

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            YT LI G  K G     +  +++MQ   +SP   TY  +I   C  G+V E  KLF EM
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + +  + VTY  LI G CKE +++EA  L +QM   G++PN++TY  L DG C  GE 
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A  L +++   G   ++ TYN L+    KAGN   A  L+++ME  G  P  VTYT L
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +D++ +S +M +A E+   M      P V T+ VL++G CM G +++  KL   M E  +
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN   YN +I  YC   N      +   M  KG+VP+  +Y+  I   C+     EA  
Sbjct: 500 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 559

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L   M+  G   +VS YN L + 
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKG 582



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 207/411 (50%), Gaps = 1/411 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           +M   G++P   T+N +++ + K+    +      E   + +  D   +  LI G C+ G
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +++ A+ + +++++   SP+ + YT++I G C+ G +  A  LF ++    L   + TYT
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G  K G  K+ F  + +M   G++P++ TY  L    C  G+V    +L  EM  +
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N+ TYN+L+ GLCK   + +A +L+  M++AG  P+ +TY  L+D +C + E  +A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  Q+      P+VVT+NVL+  F  +G  +    L++ M E+GI P+  TY  LI  
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           +   ++M    E+Y  M   G  PD  TY +LI G C   NMKEA  L   M        
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
              YN +I G+ K      A  L  +M  +GLV +   Y+    +   +GK
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 623



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 205/431 (47%), Gaps = 5/431 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T    Y  +I    K+    +A     +M+  G+ P    + +L+    K  +    
Sbjct: 222 NPYT----YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           +  F E  + K+  D  ++  +I G C+ G + +A ++ +++      P+ V YT+LIDG
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G ++ A  L  ++ ++GL     TYT L  GL K G      E   +M   G+  +
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +YTYN L++  C  G + +  KL  +M       + VTY TL+   CK   +  A  LL 
Sbjct: 398 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           QM    + P V+T+N L++GFC +G  +   +L   +   G  P+  TYN LI+ +    
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
           N +  +++ R M  +G+ P   TY ILI    ++ +M++A+ ++  M   GF+  V +Y 
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI G   +    EA +LF  M    L  +  +YN+       EG     L L  E  EK
Sbjct: 578 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 637

Query: 520 GLVPNIASYSS 530
            LV +I + ++
Sbjct: 638 CLVGDIQTKNT 648


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
           R+SD A+    QM++ G RP + TF +L+  +F+    S     +     R C+  L   
Sbjct: 95  RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 151

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G+++ G C+ GD++ AF +LN++E      +VVI+ ++ID  CK   ++ A  LF+++
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI  L   G   D  +    M    ++P+L T+N LI  +  EGK 
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL D+M  R +  ++ TYN+LI G C   R+ +A+++ + M      P++ TYN L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC +   +    LF ++   G     VTY  LI+     G+   A  + ++M   G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  +TY+IL+D    +  +EKA E++  MQKS    D+Y Y  +I G+C  G + +   
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF S+    ++PN V YN MI G C +     A  LL +M E G +P+  +Y++ I    
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 537 QDGKWPEAEVLLNQM 551
           +DG    +  L+ +M
Sbjct: 512 RDGDKAASAELIREM 526



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 210/396 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  PN+V Y  +++G CK GDI+ A  L 
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    +  +I  L K     D    +++M+  G+ P++ TY+ LI   C+ 
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  +++  N+VT+N LI    KE +  EAE+L D M    I P++ TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+GFC     DKA ++F  + S    P + TYN LI+ F K+   +  ++L REM  
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTYT LI       D + A +++  M   G  PD+ TY +L+ GLC  G +++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F+ M +++++ +  +Y  MI G CK G       L   ++ KG+ PN+ +Y++ I 
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC      EA  LL +M + G  P    YN L RA
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 218/439 (49%), Gaps = 7/439 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSFGILIKGCCE 187
           M+ S   P    FN LL  + K   FD   L  S      R  +  ++Y++ ILI   C 
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFD---LVISLGEKMQRLGISHNLYTYNILINCFCR 57

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              ++ A  +L ++ ++G+ P++V  +SL++G C    I  A  L  ++ E+G      T
Sbjct: 58  RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +T LI GLF +    +     ++M   G  P+L TY  +++  C  G +   F L ++M 
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
             ++  +VV +NT+I  LCK   V +A  L  +M+  GI PNV+TY+ LI   C  G   
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A +L + +     +P++VT+N LI AF K G    A  L  +M +R I P   TY  LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F   D ++KA +M+  M      PD+ TY  LI G C    +++ ++LF  M    L 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            + V Y  +I G   +G+   A ++  +M   G+ P+I +YS  +  LC +GK  +A  +
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            + M K  +K  + +Y  +
Sbjct: 418 FDYMQKSEIKLDIYIYTTM 436



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 157/301 (52%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           EKMQ  G+S +LYTYN LI+ +C   ++S    L  +M       ++VT ++L+ G C  
Sbjct: 34  EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ +A  L+DQM   G  P+ IT+  LI G     +  +A  L +++   G  P++VTY
Sbjct: 94  KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            V++    K G+  +A +L+ +ME   I    V +  +IDS  +   ++ A  ++  M+ 
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+V TY  LI  LC  G   +AS+L + M E K+ PN V +N +I  + KEG    
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A +L  +M ++ + P+I +Y+S I   C   +  +A+ +   M+     P +  YN L +
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 569 A 569
            
Sbjct: 334 G 334



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           ++ +IID+  K R  D AL  F +M   G+RP   T++SL+  +   CS+    D   L 
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 243

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  ++ +F  LI    + G   +A ++ + + +    P++  Y SLI+G C +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +++AK +F  +          TY  LI G  K+   +DG E + +M   G+     TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI    ++G      K+F +M    V  +++TY+ L+ GLC   ++++A  + D M+ 
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  ++  Y  +I+G C AG+ D  + LF  L   G  P+VVTYN +I         + 
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+++M+E G  P   TY  LI + +R  D   + E+   M+   F  D  T G++ +
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543

Query: 464 GL 465
            L
Sbjct: 544 ML 545



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++  +N L+  + K  +      L ++M+  GIS N+ TYN LI+ FC   +   A  L 
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++   G  PS+VT + L+  +        A  LV +M E G  P  +T+T LI      
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           +   +A  +   M + G  P++ TYGV+++GLC +G++  A  L N M   K+E + V++
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I   CK  +   AL L  EM  KG+ PN+ +YSS I  LC  G+W +A  LL+ M++
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 554 LGLKPSVSLYNILYRA 569
             + P++  +N L  A
Sbjct: 249 KKINPNLVTFNALIDA 264



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D    +   ++AL  F  M  S ++     + +++  + K+   D GW LF S +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V ++  +I G C    L +A+ +L +++E G  P+   Y +LI    ++GD  
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            +  L R++     V    T   L+  +  +G
Sbjct: 518 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 548


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 203/406 (50%), Gaps = 38/406 (9%)

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCC 186
           FY H +LD+GV P +  FN L+  +I+S                                
Sbjct: 229 FYLH-LLDAGVPPEARQFNMLMRDMIRS-------------------------------- 255

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G L  A  V +++   G  P VV + +L+ G CK  D+  A  L   + + G+    +
Sbjct: 256 --GKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 313

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY   I GL K G  +D  E +E+M   G++P+      LI  +C EG V+ G +L  EM
Sbjct: 314 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 373

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R V  ++V YN L+ G C+   ++ A  ++++M+  G+ P+ +TY  LIDG C  GE 
Sbjct: 374 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 433

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A  +  ++   G +   VTY  LI   SKAG S  A  ++ EM E G+ P   TYT++
Sbjct: 434 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMV 493

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID+F ++ D++  F+    MQ  G +P + TY V+++G C  G MK A  L N+M    +
Sbjct: 494 IDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGV 553

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            PND+ YN+++ G+CK G       L    + KG+V +   Y+S I
Sbjct: 554 CPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLI 596



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%)

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A   +  + + G+      + +L+  + ++G        +++M   GV P++ T+N 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C    ++    L   M    +A +V TY   I GLCK  R+Q+A  + ++M   G
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++PN +    LID  C  G+      L  ++ + G    +V YN L+  F +  + K A+
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D+V EM + G+ P +VTYT LID   +  +++ A EM   M   G + D  TY  LI GL
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G   +A ++   M E  L+P++  Y M+I  +CK G+     + L EM  KG  P I
Sbjct: 463 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 522

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  +   C  G+   A++LLN ML +G+ P+   YNIL
Sbjct: 523 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 563



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 139/274 (50%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E +  +  +    V      +N L+  + +  ++  A  + D+M   G+ P V+T+N 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+ G C A + + A  L   +   G +P V TY   I+   K G  + A ++  EM ERG
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ V  T LID+  +  D+    E+   M   G   D+  Y  L++G C   +MK A+
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M +  L+P+ V Y  +I G CKEG    A+ +  EM+++G+  +  +Y++ I  L
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + G+  +AE +L +M++ GL+P  + Y ++  A
Sbjct: 463 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 496



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI-------------DSFVRSDDM 436
           +L+ A S    + + S + +   + G+ P   +  +L              D   R   +
Sbjct: 164 LLVSAASTDDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPSV 223

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +A+  Y  +  +G  P+   + +L+  +   G +  A  +F+ M    ++P  V +N +
Sbjct: 224 PEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTL 283

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G CK  +   A  L G M + G+ P++ +Y + I  LC+ G+  +A  +  +M + GL
Sbjct: 284 MSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGL 343

Query: 557 KPSVSLYNILYRA 569
            P+  +   L  A
Sbjct: 344 NPNTVVLTTLIDA 356


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 203/406 (50%), Gaps = 38/406 (9%)

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCC 186
           FY H +LD+GV P +  FN L+  +I+S                                
Sbjct: 101 FYLH-LLDAGVPPEARQFNMLMRDMIRS-------------------------------- 127

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G L  A  V +++   G  P VV + +L+ G CK  D+  A  L   + + G+    +
Sbjct: 128 --GKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 185

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY   I GL K G  +D  E +E+M   G++P+      LI  +C EG V+ G +L  EM
Sbjct: 186 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 245

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R V  ++V YN L+ G C+   ++ A  ++++M+  G+ P+ +TY  LIDG C  GE 
Sbjct: 246 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 305

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A  +  ++   G +   VTY  LI   SKAG S  A  ++ EM E G+ P   TYT++
Sbjct: 306 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMV 365

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID+F ++ D++  F+    MQ  G +P + TY V+++G C  G MK A  L N+M    +
Sbjct: 366 IDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGV 425

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            PND+ YN+++ G+CK G       L    + KG+V +   Y+S I
Sbjct: 426 CPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLI 468



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%)

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A   +  + + G+      + +L+  + ++G        +++M   GV P++ T+N 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C    ++    L   M    +A +V TY   I GLCK  R+Q+A  + ++M   G
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++PN +    LID  C  G+      L  ++ + G    +V YN L+  F +  + K A+
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D+V EM + G+ P +VTYT LID   +  +++ A EM   M   G + D  TY  LI GL
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G   +A ++   M E  L+P++  Y M+I  +CK G+     + L EM  KG  P I
Sbjct: 335 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 394

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  +   C  G+   A++LLN ML +G+ P+   YNIL
Sbjct: 395 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 435



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 4/369 (1%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLF 163
           ++R +  ++   ++S     A   F +ML  GV+P   TFN+L+  + K+   +    L 
Sbjct: 113 EARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALR 172

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               +  +  DVY++G  I+G C+ G +  A E+  ++ E G +PN V+ T+LID  CK 
Sbjct: 173 GLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKE 232

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           GD+     L  ++   G+ A    Y  L+ G  +    K   +  E+M+ +G+ P   TY
Sbjct: 233 GDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTY 292

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI   C EG++    ++  EM    VA + VTY  LI GL K  R  +AER+L +M  
Sbjct: 293 TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMME 352

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG+ P+  TY  +ID FC  G+    F+   ++++ G++P +VTYNV++  F   G  K 
Sbjct: 353 AGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKN 412

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  M   G+ P+++TY IL+D   +   +    E+ S     G   D   Y  LI+
Sbjct: 413 ADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLIN 469

Query: 464 GLCMKGNMK 472
               K + K
Sbjct: 470 EFVKKKSAK 478



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 139/274 (50%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E +  +  +    V      +N L+  + +  ++  A  + D+M   G+ P V+T+N 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+ G C A + + A  L   +   G +P V TY   I+   K G  + A ++  EM ERG
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P+ V  T LID+  +  D+    E+   M   G   D+  Y  L++G C   +MK A+
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M +  L+P+ V Y  +I G CKEG    A+ +  EM+++G+  +  +Y++ I  L
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + G+  +AE +L +M++ GL+P  + Y ++  A
Sbjct: 335 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 368



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI-------------DSFVRSDDM 436
           +L+ A S    + + S + +   + G+ P   +  +L              D   R   +
Sbjct: 36  LLVSAASTDDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPSV 95

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +A+  Y  +  +G  P+   + +L+  +   G +  A  +F+ M    ++P  V +N +
Sbjct: 96  PEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTL 155

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G CK  +   A  L G M + G+ P++ +Y + I  LC+ G+  +A  +  +M + GL
Sbjct: 156 MSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGL 215

Query: 557 KPSVSLYNILYRA 569
            P+  +   L  A
Sbjct: 216 NPNTVVLTTLIDA 228


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 217/398 (54%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +L + S  +L+   C++  ++ AF++  ++E  G  P+++ Y++LI G CK G++++A +
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+ K+    ++     +  ++ GL + G       +++ +  + +S  +  YN +I  Y 
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G   E  KL+ ++  + ++  +VT+N+L+ G C   ++ +A RLLD +K+ G+ PN +
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAV 597

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  L++ +C+ G       L +++K+    P+ +TY V+I+   K    + +  L+ +M
Sbjct: 598 TYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDM 657

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           +  G+TP +V+Y  +I +F ++ DM KAF++Y  M      P   TY +LI+G C+ G++
Sbjct: 658 DAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDL 717

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           K+A  L  S+   K+  N   Y  +I  +C +G+  +A+    +M EKG   +I  YS+ 
Sbjct: 718 KDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAV 777

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           IG LC+     EA+     ML  G+ P   L+ +L  A
Sbjct: 778 IGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 232/450 (51%), Gaps = 2/450 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVY 176
           +SR  D  LF F        +P   +FN+++    K    D    FF    +  +  D Y
Sbjct: 259 QSRFQDAVLF-FQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAY 317

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+ ILI G C AG + +A ++ N +E  G  P++V Y  L  G    G I  A  + +K+
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKM 377

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G      TYTVLICG  + G  ++  + Y++M  +G   S+ +   L+   C   +V
Sbjct: 378 LIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQV 437

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              FKLF EM    +  +++TY+TLI GLCK+  VQ+A  L ++M    I PN + +  +
Sbjct: 438 DVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAI 497

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           + G C+ G+  +A   F+ L ++  S  ++ YN++I  + K GN++ A  L +++ E+GI
Sbjct: 498 LMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGI 557

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P+ VT+  L+  F  +  + +A  +   ++  G  P+  TY  L++  C +GNM+   +
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L + M    + P  + Y ++I G CK+     + +LL +M+  GL P+  SY++ I   C
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +     +A  L ++ML   L+P+   YNIL
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 250/555 (45%), Gaps = 60/555 (10%)

Query: 51  LRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYE 110
           LRL+L +M  H  + +   + +++ G   S                  SSN V     ++
Sbjct: 145 LRLVLDQMLLHEGSGSAPSLCELLLGSFRSWD----------------SSNVV-----WD 183

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
            +  A+ +S +   ALF   +M D        T+NSLL  +  S   +  W  ++E +  
Sbjct: 184 MLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHS---NIMWDVYNEIKVS 240

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                 Y+  I++ G C       A       E   F P+VV + +++   CK G ++ A
Sbjct: 241 GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVA 300

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K  F  + + GL+   ++Y +LI GL   G   +  +    M+ +G+ P + TYN L   
Sbjct: 301 KSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKG 360

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +   G ++  + +  +M  +    N+VTY  LICG C+   V+EA +L  +M   G   +
Sbjct: 361 FRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLS 420

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           +I+   L+   C + + D AF+LF ++++NG  P ++TY+ LI    K G  + A  L  
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYE 480

Query: 410 EMEERGITPSE-----------------------------------VTYTILIDSFVRSD 434
           +M    I P+                                    + Y I+ID +++  
Sbjct: 481 KMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRG 540

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           +  +A ++Y  + + G SP + T+  L++G C+   + +A +L +++    LEPN V Y 
Sbjct: 541 NTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYT 600

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++  YC+EGN    L LL EM  K + P   +Y+  I  LC+  K  E+  LL  M  +
Sbjct: 601 TLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAV 660

Query: 555 GLKPSVSLYNILYRA 569
           GL P    YN + +A
Sbjct: 661 GLTPDQVSYNTIIQA 675



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 210/405 (51%), Gaps = 3/405 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYS 177
           KSR  D A   F +M  +G+RP   T+++L+  + K     +  L + E  C   +   S
Sbjct: 433 KSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY-EKMCSNRIIPNS 491

Query: 178 F--GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
              G ++ G CE G +++A    + L     S ++++Y  +IDG  K G+   A  L+++
Sbjct: 492 LIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQ 551

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +GE G+  T  T+  L+ G   N          + ++L+G+ P+  TY  L++ YC EG 
Sbjct: 552 LGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGN 611

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +    +L  EM+ + +    +TY  +I GLCK+ ++QE+ +LL+ M   G++P+ ++YN 
Sbjct: 612 MQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNT 671

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I  FC A +  KAF+L++++  +   P+ VTYN+LI  F   G+ K A +L+  ++ R 
Sbjct: 672 IIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRK 731

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           +  ++  YT +I +     D++KA   +  M + GF   +  Y  +I  LC +  + EA 
Sbjct: 732 VNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAK 791

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
             F  M    + P+  ++ +++  + + G+      LL EM + G
Sbjct: 792 YFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 222/426 (52%), Gaps = 5/426 (1%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M++ G+ P   TFN+L+    ++    +   L        + +DV ++G ++ G C+ GD
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
              A  +L+++EE    P+VVIY+++ID  CK+G    A+ LF ++ E G+     TY  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I G    G   D       M    ++P + T+N LI     EGK+ E  KL DEM HR 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  + VTYN++I G CK  R  +A+ + D M     SP+V+T+N +ID +C A   D+  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L  ++   G   +  TYN LI  F +  N   A DL +EM   G+ P  +T  IL+  F
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             ++ +E+A E++ ++Q S    D   Y ++IHG+C    + EA  LF S+    +EP+ 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN+MI G+C +     A  L  +M + G  P+ ++Y++ I    + G+  ++  L+++
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 551 MLKLGL 556
           M   G 
Sbjct: 417 MRSNGF 422



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 208/395 (52%), Gaps = 4/395 (1%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V +F  LI G C  G + +A  ++N++   G   +VV Y ++++G CK GD + A  L  
Sbjct: 10  VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 69

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E  +      Y+ +I  L K+G   D    + +M   G++P+++TYNC+I  +C+ G
Sbjct: 70  KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 129

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           + S+  +L  +M  RE+  +V+T+N LI    KE ++ EAE+L D+M    I P+ +TYN
Sbjct: 130 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 189

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I GFC     D A  +F+ +     SP VVT+N +I  + +A        L+RE+  R
Sbjct: 190 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+  +  TY  LI  F   D++  A +++  M   G  PD  T  +L++G C    ++EA
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  +  +K++ + V YN++I G CK      A  L   +   G+ P++ +Y+  I  
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C      +A VL ++M   G +P  S YN L R 
Sbjct: 366 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 4/292 (1%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G++P + T+N LI+  C EG+V E   L ++M  + +  +VVTY T++ G+CK    + A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LL +M+   I P+V+ Y+ +ID  C  G    A  LF+++   G +P+V TYN +I  
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G    A  L+R+M ER I P  +T+  LI + V+   + +A ++   M      PD
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             TY  +I+G C      +A  +F+ M      P+ V +N +I  YC+       ++LL 
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           E++ +GLV N  +Y++ I   C+      A+ L  +M+  G+ P     NIL
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 173/354 (48%), Gaps = 11/354 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           +Y +IID   K      A + F +ML+ G+ P   T+N +   +   CSF    D   L 
Sbjct: 82  IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM---IDGFCSFGRWSDAQRLL 138

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 ++  DV +F  LI    + G L +A ++ +++      P+ V Y S+I G CK+
Sbjct: 139 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 198

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + AK +F  +    +V    T+  +I    +     +G +   ++   G+  +  TY
Sbjct: 199 NRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 254

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LIH +C    ++    LF EM    V  + +T N L+ G C+  +++EA  L + ++M
Sbjct: 255 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 314

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  + + YN +I G C   + D+A+ LF  L  +G  P V TYNV+I  F        
Sbjct: 315 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 374

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A+ L  +M++ G  P   TY  LI   +++ +++K+ E+ S M+ +GFS D +T
Sbjct: 375 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 428



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 44/432 (10%)

Query: 16  LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
           +++ M K+   K  S  N  S+    H    + I   ++        H+ AQ L  +++ 
Sbjct: 51  IVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 108

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
             I  + FT                        Y  +ID      R SD A      M++
Sbjct: 109 KGIAPNVFT------------------------YNCMIDGFCSFGRWSD-AQRLLRDMIE 143

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
             + P   TFN+L+     S S  +G LF +E  C   L      D  ++  +I G C+ 
Sbjct: 144 REINPDVLTFNALI-----SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK- 197

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
              +  F+    + ++  SP+VV + ++ID  C+   ++    L R+I   GLVA   TY
Sbjct: 198 ---HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 254

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  +        + +++M  +GV P   T N L++ +C   K+ E  +LF+ ++ 
Sbjct: 255 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 314

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            ++  + V YN +I G+CK  +V EA  L   + + G+ P+V TYN +I GFC       
Sbjct: 315 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 374

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF+++K NG  P   TYN LIR   KAG    + +L+ EM   G +    T  ++ D
Sbjct: 375 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434

Query: 429 SFVRSDDMEKAF 440
             +    ++K+F
Sbjct: 435 -LITDGRLDKSF 445



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 88/159 (55%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G+TP  +T+  LI+       + +A  + + M   G   DV TYG +++G+C  G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
            K A  L + M ET ++P+ V+Y+ +I   CK+G+   A  L  EM EKG+ PN+ +Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I   C  G+W +A+ LL  M++  + P V  +N L  A
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 159


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 228/447 (51%), Gaps = 2/447 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRC 169
           ++ID   K+     A+  F  M   G+ P    +++L+  + K+   D      ++  + 
Sbjct: 131 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
               D  ++ +LI G C++GD+  A    +++ E G  P+V  Y  LI G CK G+ + A
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250

Query: 230 KM-LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L ++    G     HTYT ++  L KN   ++     EK+  NG +P++ TYN L++
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G++ E   L  ++       +VVTY +LI GL KE R  EA +L  +M + G++ 
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + + Y  LI      G+  +A  ++  + S+G  P VVT + +I   SKAG    A  + 
Sbjct: 371 DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 430

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           + ME RG+ P+EV Y+ LI    ++  M+ A EM + M+K+  +PD  TY +LI GLC  
Sbjct: 431 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 490

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++ A   F+ M E   +P+   YN++I G+CK GN+  A  +  +M+      N+ +Y
Sbjct: 491 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            + I  LC+  +  +A +    M + G
Sbjct: 551 GALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 227/462 (49%), Gaps = 6/462 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y S+ID   K + S +A   F +M   G+   +  + +L+  ++++    +    +   +
Sbjct: 59  YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C    DV +   +I G  +AG +  A  +   +E  G +PN V+Y++LI G CK   
Sbjct: 119 SHGCVP--DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +  ++ +        TY VLI GL K+G  +    F+++M   G  P +YTYN 
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236

Query: 286 LIHEYCNEGKV-SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           LI  +C  G   +    L  E        ++ TY  ++  L K  +++EA  L++++   
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P + TYN L++G C  G  ++A  L  ++  NG +P VVTY  LI    K   S  A
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L +EM  RG+    V YT LI   +++  + +A  +Y  M   G  PDV T   +I G
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L   G +  A ++F SM    L PN+VVY+ +I G CK      AL +L +M +    P+
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +Y+  I  LC+ G    A    ++ML+ G KP V  YNIL
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 518



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/417 (33%), Positives = 209/417 (50%), Gaps = 6/417 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y ++I    K+R  D AL    QM  +   P + T+N L+  + KS   +    FF   
Sbjct: 163 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM-GFSPNVVIYTSLIDGCCKN 223
            E  CK   DVY++ ILI G C+AG+ + A   L Q   + G + ++  YT+++D   KN
Sbjct: 223 LEAGCKP--DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKN 280

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             IE A  L  KI   G   T  TY  L+ GL K G  ++  +   K+  NG +P + TY
Sbjct: 281 KKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 340

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI     E +  E +KLF EM  R +A + V Y  LI  L +  ++ +A  +   M  
Sbjct: 341 TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 400

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  P+V+T + +IDG   AG    A R+F  +++ G +P+ V Y+ LI    KA     
Sbjct: 401 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 460

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +++ +M++   TP  +TY ILID   +S D+E A   +  M ++G  PDVYTY +LI 
Sbjct: 461 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 520

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           G C  GN   A  +F+ M  ++   N V Y  +I G CK     +A      M E+G
Sbjct: 521 GFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 201/387 (51%), Gaps = 1/387 (0%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + ++  L+ G C+ G L +A ++L ++ + G +P+VV YTSLIDG  K      A  LF+
Sbjct: 21  IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 80

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   GL      YT LI  L + G        Y+ M  +G  P + T + +I      G
Sbjct: 81  EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 140

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++    ++F  M  R +A N V Y+ LI GLCK  ++  A  +L QMK A  +P+ ITYN
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS-DLVREMEE 413
            LIDG C +G+ + A   F+++   G  P V TYN+LI  F KAGN+  AS  L +E   
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTI 260

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G T    TYT ++D   ++  +E+A  +   +  +G +P + TY  L++GLC  G ++E
Sbjct: 261 NGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 320

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  L   + +    P+ V Y  +I G  KE  S+ A +L  EM  +GL  +   Y++ I 
Sbjct: 321 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR 380

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            L Q GK P+A  +   M   G  P V
Sbjct: 381 ELLQTGKIPQASSVYKTMTSHGCVPDV 407



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 166/306 (54%), Gaps = 1/306 (0%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++     EK+  NG +P++ TYN L++  C  G++ E   L  ++       +VVTY +L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL KE R  EA +L  +M + G++ + + Y  LI      G+  +A  ++  + S+G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P VVT + +I   SKAG    A  + + ME RG+ P+EV Y+ LI    ++  M+ A E
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           M + M+K+  +PD  TY VLI GLC  G+++ A   F+ M E   +P+   YN++I G+C
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 502 KEGNSYRALRLLG-EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           K GN+  A   L  E    G   +I +Y++ +  L ++ K  EA  L+ ++   G  P++
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302

Query: 561 SLYNIL 566
           + YN L
Sbjct: 303 ATYNAL 308



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 169/344 (49%), Gaps = 5/344 (1%)

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           IE A  L  KI   G   T  TY  L+ GL K G  ++  +   K+  NG +P + TY  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI     E +  E +KLF EM  R +A + V Y  LI  L +  ++ +A  +   M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+V+T + +IDG   AG    A R+F  +++ G +P+ V Y+ LI    KA     A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +++ +M++   TP  +TY +LID   +S D+E A   +  M ++G  PDVYTY +LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDV---VYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C  GN   AS       ET +    +    Y  ++    K      A+ L+ ++   G  
Sbjct: 242 CKAGNTDAASHSL--AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P IA+Y++ +  LC+ G+  EA  LL +++  G  P V  Y  L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 124/237 (52%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +++EA  L++++   G +P + TYN L++G C  G  ++A  L  ++  NG +P VVTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI    K   S  A  L +EM  RG+    V YT LI   +++  + +A  +Y  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  PDV T   +I GL   G +  A ++F SM    L PN+VVY+ +I G CK      A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L +L +M +    P+  +Y+  I  LC+ G    A    ++ML+ G KP V  YNIL
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 216/438 (49%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++A+     M + G+ P S T N +L   ++    +     F E   + V  D  S+ ++
Sbjct: 164 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 223

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + GC   G + +A   L  + + GF P+    T ++   C+NG + RA   FRK+ +LG 
Sbjct: 224 VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 283

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 +T LI GL K G  K  FE  E+M  NG  P++YT+  LI   C  G   + F+
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343

Query: 302 LFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           LF ++ R      NV TY ++I G CKE ++  AE L  +MK  G+ PNV TY  LI+G 
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG   +A+ L N +   G  P++ TYN  I +  K   +  A +L+ +    G+    
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYTILI    + +D+ +A   +  M K+GF  D+    +LI   C +  MKE+ +LF  
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           +    L P    Y  MI  YCKEG+   AL+    M   G VP+  +Y S I  LC+   
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA  L   M+  GL P
Sbjct: 584 VDEACKLYEAMIDRGLSP 601



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 38/443 (8%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           I+ A  ++ L ++A++YF +M+D G +P                                
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKP-------------------------------- 285

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             ++ +F  LI G C+ G + +AFE+L ++   G+ PNV  +T+LIDG CK G  E+A  
Sbjct: 286 --NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343

Query: 232 LFRKIGELGLVATQ-HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           LF K+          HTYT +I G  K          + +M+  G+ P++ TY  LI+ +
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G     ++L + M       N+ TYN  I  LCK+ R  EA  LL++    G+  + 
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  LI   C   + ++A   F ++   G    +   N+LI AF +    K +  L + 
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +   G+ P++ TYT +I  + +  D++ A + +  M++ G  PD +TYG LI GLC K  
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA KL+ +M +  L P +V    + + YCK  +S  A+ LL  +++K  +  +    +
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTV---RT 640

Query: 531 TIGVLCQDGKWPEAEVLLNQMLK 553
            +  LC + K   A +   ++L+
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLE 663



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 1/384 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++   E G LN+A  ++  ++  G +P+ +    +++   + G IE A+ +F ++   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V    +Y +++ G F++G  ++   +   M   G  P   T   ++   C  G V+   
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
             F +M       N++ + +LI GLCK+  +++A  +L++M   G  PNV T+  LIDG 
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 361 CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           C  G T+KAFRLF +L +S+   P+V TY  +I  + K      A  L   M+E+G+ P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TYT LI+   ++    +A+E+ +LM   GF P++YTY   I  LC K    EA +L N
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             +   LE + V Y ++I   CK+ +  +AL     MN+ G   ++   +  I   C+  
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLY 563
           K  E+E L   ++ LGL P+   Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETY 536



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 36/335 (10%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           MQ  G++PS  T NC++      G +     +FDEM  R V  +  +Y  ++ G  ++ +
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232

Query: 331 VQEAERLLDQM---------------------------------KMA--GISPNVITYNK 355
           +QEA+R L  M                                 KM   G  PN+I +  
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL-VREMEER 414
           LIDG C  G   +AF +  ++  NG  P+V T+  LI    K G ++ A  L ++ +   
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P+  TYT +I  + + D + +A  ++S M++ G  P+V TY  LI+G C  G+   A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +L N M +    PN   YN  I   CK+  +  A  LL +    GL  +  +Y+  I  
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C+     +A     +M K G +  + L NIL  A
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 5/309 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+ H K+    +A    + M D G  P   T+N+ +  + K     + +   ++  
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C +E D  ++ ILI+  C+  D+N+A     ++ + GF  ++ +   LI   C+   ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++ LF+ +  LGL+ T+ TYT +I    K G      +++  M+ +G  P  +TY  LI
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C +  V E  KL++ M  R ++   VT  TL    CK      A  LL+ +      
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---K 632

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             + T   L+   C   +   A   F +L     S   VT      A S++G + + +DL
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDL 692

Query: 408 VREMEERGI 416
              +  RG+
Sbjct: 693 TERI-SRGV 700



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 91/176 (51%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++R FS+ G    A  +V +M+ +G+TPS +T   +++  V    +E A  ++  M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  +Y +++ G    G ++EA +    M +    P++    +++   C+ G   RA+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +M + G  PN+ +++S I  LC+ G   +A  +L +M++ G KP+V  +  L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 228/474 (48%), Gaps = 16/474 (3%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K RL   ++D        D A+  F  ML S   P    FN L   + ++  +D      
Sbjct: 59  KERLRSGLVDIK-----KDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALC 113

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +   K +  D+Y+  I+I   C    L  AF  + ++ ++G+ PN V + +L++G C  
Sbjct: 114 KQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLE 173

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL-----QKDGFEFYEKMQLNGVSP 278
           G +  A  L        +V +QH   ++      NGL       +  +   +M  NG  P
Sbjct: 174 GRVFEAVELVD-----CMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQP 228

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           + +TY  +++  C  G  +    L  +M HR++  +VVTY  +I  LCK+ R+ +A    
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFF 288

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M+  GI  NV TYN LI  FC  G  D   +L   + +   +P+VVT++ LI +  K 
Sbjct: 289 SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKE 348

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A DL  EM  RGI P+ +TY  LI        +++A +M  LM   G  PD++TY
Sbjct: 349 GKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTY 408

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LI+G C    + +  +LF  M    +  + V Y+ +I G+C+      A ++  EM  
Sbjct: 409 NILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVS 468

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +G+ P I +Y+  +  LC +G+  EA  +L+QM K  ++  + +YNI+     N
Sbjct: 469 QGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCN 522



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 226/435 (51%), Gaps = 1/435 (0%)

Query: 136 GVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P + TFN+LL    ++   F+   L       +   D+ +   ++ G C    +++A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            +++ ++   G  PN   Y  +++  CK+G+   A  L RK+    +     TYT++I  
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K+G   D   F+ +M+  G+  +++TYN LI  +C+ G+  +G +L  +M  R++  N
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT++ LI  L KE ++ EA+ L ++M   GI PN ITYN LI G C+    D+A ++ +
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + S G  P + TYN+LI  F KA        L R+M  RG+    VTY+ LI  F +S 
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +  A +++  M   G  P + TY +L+ GLC  G ++EA  + + M + K+E +  +YN
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I G C       A  L   +  KG+  +I SY+  +  LC+     EA+ L  +M + 
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKED 574

Query: 555 GLKPSVSLYNILYRA 569
           G +P    YN L RA
Sbjct: 575 GYEPDGCTYNTLIRA 589



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 204/391 (52%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +++G ++   C++G+   A ++L ++E     P+VV YT +ID  CK+G ++ A   F +
Sbjct: 231 FTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSE 290

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G+ A   TY  LI      G   DG +    M    ++P++ T++ LI     EGK
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           ++E   L++EM  R +  N +TYN+LI GLC + R+ EA +++D M   G  P++ TYN 
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+GFC A + D   RLF ++   G     VTY+ LI+ F ++    +A  + +EM  +G
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  +TY IL+D    + ++E+A  +   M K     D+  Y ++IHG+C    + +A 
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF S+    ++ +   YN+M+ G CK  +   A  L  +M E G  P+  +Y++ I   
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAH 590

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +      +  L+ +M + G     S   I+
Sbjct: 591 LRGNDITTSVQLIEEMKRCGFSSDASTVKIV 621



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 209/421 (49%), Gaps = 8/421 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELD 174
           LK R+S +A+    +M+ +G +P   T+  +L  + KS +           E+R K++  
Sbjct: 207 LKDRVS-EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR-KIKPH 264

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V ++ I+I   C+ G L+ A    +++E  G   NV  Y SLI   C  G  +    L R
Sbjct: 265 VVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +    +     T++ LI  L K G   +  + Y +M   G+ P+  TYN LI+  CN+ 
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++ E  ++ D M  +    ++ TYN LI G CK  +V +  RL  +M + G+  + +TY+
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC + +   A ++F ++ S G  P ++TY +L+      G  + A  ++ +M + 
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +      Y I+I     ++ ++ A+ ++  +   G   D+ +Y +++ GLC + ++ EA
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEA 564

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M E   EP+   YN +I  + +  +   +++L+ EM   G     +S +ST+ +
Sbjct: 565 DALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF----SSDASTVKI 620

Query: 535 L 535
           +
Sbjct: 621 V 621



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 7/361 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFF 164
           Y  IID   K    D AL +F +M   G++    T+NSL   +   CSF    D   L  
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL---IGSFCSFGRWDDGAQLLR 324

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                K+  +V +F  LI    + G L +A ++ N++   G  PN + Y SLI G C + 
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A  +   +   G      TY +LI G  K     DG   + KM L G+     TY+
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI  +C   K+    K+F EM  + V   ++TY  L+ GLC    ++EA  +LDQM   
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            +  ++  YN +I G C+A + D A+ LF  L S G    + +YN+++    K  +   A
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEA 564

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L R+M+E G  P   TY  LI + +R +D+  + ++   M++ GFS D  T  +++  
Sbjct: 565 DALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDM 624

Query: 465 L 465
           L
Sbjct: 625 L 625


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 247/515 (47%), Gaps = 77/515 (14%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILI 182
           QA  +F  M+ S   P  ++FN LL  + K   + + +  ++E R   +  D+++  IL 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C    +++A   +  +   G+ PNVV YT+LI G C    I  A  LF ++ +LG  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 243 --------------------------------ATQH---------TYTVLICGLFKNGLQ 261
                                           A+Q+         TY+++I GL K G +
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +  E +E+M+  G+ P + +Y+ LIH +C  GK  +   LFDEM  + V  ++VT++ L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I  LCKE +V EA++LL+ M   GI PN+ITYN LIDGFC  G+ + A  LF  + S G 
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT----------------- 424
            P  ++Y  LI  + K    K A +L  EM + G +P+  TY                  
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 425 ------------------ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
                             I +D   ++D + +A E+++ ++   F  ++  Y  LI GLC
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++ A +LF  + +  L+P+ V YN+MI G+CK G    A  L  +M E G  P+I 
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDII 553

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +Y++ +   C+  K  E   LL++M++  + P+ +
Sbjct: 554 AYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 220/460 (47%), Gaps = 42/460 (9%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           +AL     +L  G  P   T+ +L+  +       +   LF    +     +  ++G LI
Sbjct: 144 EALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLI 203

Query: 183 KGCCEAGDLNKAF----EVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           KG C+ G++N A     E+LN   + G +  P V+ Y+ +IDG CK G  + AK LF ++
Sbjct: 204 KGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEM 263

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G++    +Y+ LI G    G        +++M   GV P + T++ LI   C EGKV
Sbjct: 264 KAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKV 323

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +E  KL + M  R +  N++TYN+LI G C    +  A  L   M   G+ P+ I+Y  L
Sbjct: 324 TEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTL 383

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+G+C   +  +A  L+N++   G+SP+V TY  L++   + G    A  L   M+  G+
Sbjct: 384 INGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGV 443

Query: 417 TPSEVTYTILIDSFVRSD-----------------------------------DMEKAFE 441
           + +   Y I +D   ++D                                    +E A+E
Sbjct: 444 SANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWE 503

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  + + G  PDV TY ++IHG C  G +  A+ LF  M E    P+ + YN ++ G+C
Sbjct: 504 LFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
           +       ++LL +M +K + PN AS +  + +LC+D K+
Sbjct: 564 EGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 603



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 8/357 (2%)

Query: 221 CKNGDIE--RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           CK G+I   +A   F  +     +    ++  L+ GL K       F  Y +M+L G+SP
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            L+T + L +  CN  +VSE       +  R    NVVTY TLI GLC E R+ EA RL 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS------PSVVTYNVLI 392
            +M+  G +PN +TY  LI G C  G  + A +L  ++ ++         P V+TY+++I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               K G    A +L  EM+ +G+ P  ++Y+ LI  F  +   +++  ++  M   G  
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD+ T+ VLI  LC +G + EA KL   M +  + PN + YN +I G+C  G+   A  L
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              M  KGL P+  SY++ I   C+  K  EA  L N+ML++G  P+V+ Y  L + 
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 243/485 (50%), Gaps = 2/485 (0%)

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
           RS L  + ++  S S  V     Y  +ID   K+   ++A  ++ +M   G+R    + N
Sbjct: 280 RSALVLVNEI--SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337

Query: 146 SLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           S+L   +K  S+   +  F++       +V++F  L+   C+ G +N+A  + +++   G
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG 397

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
            SPNVV Y ++I G C+  +I  A  +++++ + G      T+T+L+ G FK G  ++ F
Sbjct: 398 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 457

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             + +M+   + P+  T   +I   C  G+  EG  LF++   +      + YNT+I G 
Sbjct: 458 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 517

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            KE  +  A  +  +M   GI+P+ +TY  LIDGFC     D A +L N +K  G    +
Sbjct: 518 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 577

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
             Y  LI  F K  + K A +L+ E+   G++P+   Y  +I  F   +++E+A ++Y  
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G   D+ TY  LI GL   G +  AS +   M    + P+D  + ++I G C +G 
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A ++L +MN K ++P++  Y++ I    ++G   EA  L ++ML  GL P    Y+I
Sbjct: 698 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 757

Query: 566 LYRAK 570
           L   K
Sbjct: 758 LVNGK 762



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 217/401 (54%), Gaps = 4/401 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  +I  C + G++ +A  + + +   G S N+ + TSL+ G C  G++  A +L  +I
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E GLV  + TY+VLI G  KNG  +  FEFY +M+  G+  S+Y+ N ++  Y      
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              F +F++     +A NV T+NTL+  LCKE ++ EA  L D++   GISPNV++YN +
Sbjct: 350 QNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C     + A +++ ++  NG +P+ VT+ +L+  + K G+ + A  +   M++  I
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P++ T  I+I    ++    +  ++++     GF P    Y  +I G   +GN+  AS 
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           ++  M E  + P+ V Y  +I G+CK  N   AL+LL +M  KGL  +I +Y + I   C
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           +      A  LLN++   GL P+  +YN +   ++  NN+E
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 214/437 (48%), Gaps = 38/437 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           SI++ +LK +    A   F+  L+SG+     TFN+LL ++ K    ++    + E   K
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 396

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  +V S+  +I G C   ++N A +V  ++ + GF+PN V +T L+DG  K GDIE A
Sbjct: 397 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENA 456

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK----------MQLN----- 274
             +F ++ +  ++ T  T  ++I GL K G   +G + + K          M  N     
Sbjct: 457 FSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDG 516

Query: 275 --------------------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
                               G++PS  TY  LI  +C    +    KL ++M+ + +  +
Sbjct: 517 FIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 576

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           +  Y TLI G CK   ++ A  LL++++ AG+SPN   YN +I GF +    ++A  L+ 
Sbjct: 577 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYK 636

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ + G    + TY  LI    K+G    ASD+  EM  +GI P +  +T+LI+      
Sbjct: 637 KMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKG 696

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             E A ++   M      P V  Y  LI G   +GN++EA +L + M +  L P+++ Y+
Sbjct: 697 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYD 756

Query: 495 MMIFGYCK-EGNSYRAL 510
           +++ G  K +GN  R L
Sbjct: 757 ILVNGKFKGDGNFSRDL 773



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 178/390 (45%), Gaps = 37/390 (9%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G+I  A+  F +    G+   Q  Y++ +  L              +M+  G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+  +I     EG V+E  +L D+M +   + N+    +L+ G C +  ++ A  L++++
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS----------------- 384
             +G+ PN +TY+ LIDG C  G  +KAF  ++++K+ G   S                 
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 385 -----------------VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
                            V T+N L+    K G    A +L  E+  +GI+P+ V+Y  +I
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R D++  A ++Y  M  +GF+P+  T+ +L+ G   KG+++ A  +F+ M +  + 
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 469

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P D    ++I G CK G S+    L  +   +G VP    Y++ I    ++G    A  +
Sbjct: 470 PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNV 529

Query: 548 LNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             +M ++G+ PS   Y  L   +   NNI+
Sbjct: 530 YREMCEVGITPSTVTYTSLIDGFCKGNNID 559


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
           R+SD A+    QM++ G RP + TF +L+  +F+    S     +     R C+  L   
Sbjct: 94  RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 150

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G+++ G C+ GD++ AF +LN++E      +VVI+ ++ID  CK   ++ A  LF+++
Sbjct: 151 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 210

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI  L   G   D  +    M    ++P+L T+N LI  +  EGK 
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL D+M  R +  ++ TYN+LI G C   R+ +A+++ + M      P++ TYN L
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC +   +    LF ++   G     VTY  LI+     G+   A  + ++M   G+
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  +TY+IL+D    +  +EKA E++  MQKS    D+Y Y  +I G+C  G + +   
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF S+    ++PN V YN MI G C +     A  LL +M E G +P+  +Y++ I    
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 537 QDGKWPEAEVLLNQM 551
           +DG    +  L+ +M
Sbjct: 511 RDGDKAASAELIREM 525



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 210/396 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  PN+V Y  +++G CK GDI+ A  L 
Sbjct: 113 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 172

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    +  +I  L K     D    +++M+  G+ P++ TY+ LI   C+ 
Sbjct: 173 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 232

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  +++  N+VT+N LI    KE +  EAE+L D M    I P++ TY
Sbjct: 233 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 292

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+GFC     DKA ++F  + S    P + TYN LI+ F K+   +  ++L REM  
Sbjct: 293 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 352

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    VTYT LI       D + A +++  M   G  PD+ TY +L+ GLC  G +++
Sbjct: 353 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 412

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F+ M +++++ +  +Y  MI G CK G       L   ++ KG+ PN+ +Y++ I 
Sbjct: 413 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC      EA  LL +M + G  P    YN L RA
Sbjct: 473 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 193/377 (51%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DL  +  +L ++ ++G+ P++V  +SL++G C    I  A  L  ++ E+G      T+T
Sbjct: 59  DLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 118

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GLF +    +     ++M   G  P+L TY  +++  C  G +   F L ++M   
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++  +VV +NT+I  LCK   V +A  L  +M+  GI PNV+TY+ LI   C  G    A
Sbjct: 179 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 238

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +L + +     +P++VT+N LI AF K G    A  L  +M +R I P   TY  LI+ 
Sbjct: 239 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F   D ++KA +M+  M      PD+ TY  LI G C    +++ ++LF  M    L  +
Sbjct: 299 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y  +I G   +G+   A ++  +M   G+ P+I +YS  +  LC +GK  +A  + +
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418

Query: 550 QMLKLGLKPSVSLYNIL 566
            M K  +K  + +Y  +
Sbjct: 419 YMQKSEIKLDIYIYTTM 435



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
           ++ +IID+  K R  D AL  F +M   G+RP   T++SL+  +   CS+    D   L 
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 242

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                 K+  ++ +F  LI    + G   +A ++ + + +    P++  Y SLI+G C +
Sbjct: 243 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 302

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +++AK +F  +          TY  LI G  K+   +DG E + +M   G+     TY
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 362

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI    ++G      K+F +M    V  +++TY+ L+ GLC   ++++A  + D M+ 
Sbjct: 363 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + I  ++  Y  +I+G C AG+ D  + LF  L   G  P+VVTYN +I         + 
Sbjct: 423 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+++M+E G  P   TY  LI + +R  D   + E+   M+   F  D  T G++ +
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542

Query: 464 GL 465
            L
Sbjct: 543 ML 544



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 2/294 (0%)

Query: 278 PSLYTYNCLIHEYCNEGKVSE--GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           PS++ +N L+       K        L  +M       ++VT ++L+ G C   R+ +A 
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            L+DQM   G  P+ IT+  LI G     +  +A  L +++   G  P++VTY V++   
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G+  +A +L+ +ME   I    V +  +IDS  +   ++ A  ++  M+  G  P+V
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI  LC  G   +AS+L + M E K+ PN V +N +I  + KEG    A +L  +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M ++ + P+I +Y+S I   C   +  +A+ +   M+     P +  YN L + 
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 126/245 (51%), Gaps = 2/245 (0%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK--AFRLFNQLKSNGQSPS 384
           K++++ +A  L   M  +   P++  +NKL+       + D   +  L  ++   G  PS
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +VT + L+  +        A  LV +M E G  P  +T+T LI      +   +A  +  
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G  P++ TYGV+++GLC +G++  A  L N M   K+E + V++N +I   CK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL L  EM  KG+ PN+ +YSS I  LC  G+W +A  LL+ M++  + P++  +N
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 565 ILYRA 569
            L  A
Sbjct: 259 ALIDA 263



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  ++D    +   ++AL  F  M  S ++     + +++  + K+   D GW LF S +
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 456

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ +V ++  +I G C    L +A+ +L +++E G  P+   Y +LI    ++GD  
Sbjct: 457 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 516

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            +  L R++     V    T   L+  +  +G
Sbjct: 517 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 547


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 196/374 (52%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           ++ E+  +L E   +PNV  +  +ID  CK GD+  A+ L  ++  +G      TY  LI
Sbjct: 177 RSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI 236

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K G  ++  +   +M+  G  P + TYN L++ +C  G++   +  F EM+   V 
Sbjct: 237 DGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVVT++T +   CK   V+EA +L  QM+M G+ PN +TY  L+DG C AG  D A  L
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N++   G   +VVTY VL+    K G    A D+ R ME  GI  +E+ YT LI     
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             + E+A  + S M+  G   DV  YG LI GLC    + EA  L N M E  L+PN+V+
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  ++    K      A+ LL +M + G  PNI +Y + +  LC+ G   EA    N+M+
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 553 KLGLKPSVSLYNIL 566
            LGL+P+V  Y  L
Sbjct: 537 DLGLEPNVQAYTAL 550



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 234/473 (49%), Gaps = 40/473 (8%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
           L D A+    ++ +  V P + T N +L+ + +  S +  W  F +       +V++F I
Sbjct: 143 LLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP---NVFTFNI 199

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG--------------------- 219
           +I   C+ GDL +A  +L +++ +G SP+VV Y SLIDG                     
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259

Query: 220 -------------C-CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
                        C CK G +ERA   F ++   G++A   T++  +    KNG+ ++  
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           + + +M++ G+ P+  TY CL+   C  G++ +   L +EM  + V  NVVTY  L+ GL
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CKE +V EAE +   M+ AGI  N + Y  LI G      +++A  L +++K  G    V
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDV 439

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
             Y  LI           A  L+ +M+E G+ P+ V YT ++D+  ++    +A  +   
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M  SGF P++ TY  L+ GLC  G++ EA   FN M +  LEPN   Y  ++ G CK G 
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559

Query: 506 SYRALRLLGEMNEKGL-VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             +A+ LL EM +KG+ + N+   S   G L Q G   +A  L  +M+  GL+
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ-GNLQDAFALKAKMINSGLQ 611



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 248/557 (44%), Gaps = 19/557 (3%)

Query: 25  PLKAFSLFNWASRQGLQHTPQ--SISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A SL +   R  L   P+  ++  ++  LLS ++         L L     R+    
Sbjct: 103 PHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLAL----ARVRELR 158

Query: 83  FTPRSLLC-HLTQLFPSSSNPVTKSRLYESI-----------IDAHLKSRLSDQALFYFH 130
             P +  C H+        +     RL+E +           ID   K     +A     
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLA 218

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAG 189
           +M   G  P   T+NSL+    K    ++      E R C    DV ++  L+   C+ G
Sbjct: 219 RMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFG 278

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            + +A+    +++  G   NVV +++ +D  CKNG +  A  LF ++   G+   + TYT
Sbjct: 279 RMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYT 338

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  K G   D      +M   GV  ++ TY  L+   C EGKV+E   +F  M   
Sbjct: 339 CLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERA 398

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N + Y TLI G       + A  LL +MK  G+  +V  Y  LI G C+  + D+A
Sbjct: 399 GIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEA 458

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L N++   G  P+ V Y  ++ A  KA     A  L+++M + G  P+ VTY  L+D 
Sbjct: 459 KSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDG 518

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A   ++ M   G  P+V  Y  L+ GLC  G + +A  L + M +  +  +
Sbjct: 519 LCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLD 578

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           +VV   ++ G+ K+GN   A  L  +M   GL  ++  Y+  +   C      EA  +L+
Sbjct: 579 NVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLS 638

Query: 550 QMLKLGLKPSVSLYNIL 566
           +M++ G+ P   +YN L
Sbjct: 639 EMIENGITPDAVVYNCL 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 213/444 (47%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+ID + K    ++      +M   G RP   T+N+L+    K    ++ + +F+E  
Sbjct: 232 YNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMK 291

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  +V +F   +   C+ G + +A ++  Q+   G  PN V YT L+DG CK G ++
Sbjct: 292 REGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLD 351

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +L  ++ + G+     TYTVL+ GL K G   +  + +  M+  G+  +   Y  LI
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +           L  EM+ + +  +V  Y  LI GLC   ++ EA+ LL++M   G+ 
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK 471

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN + Y  ++D    A +  +A  L  ++  +G  P++VTY  L+    KAG+   A   
Sbjct: 472 PNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH 531

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M + G+ P+   YT L+D   ++  ++KA  +   M   G S D      L+ G   
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +GN+++A  L   M  + L+ +   Y   ++G+C       A  +L EM E G+ P+   
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y+  I    + G   EA +L N+M
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEM 675



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 34/235 (14%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +I+DA  K+R   +A+    +M+DSG RP                            
Sbjct: 476 IYTNIMDACFKARKESEAIALLQKMMDSGFRP---------------------------- 507

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ ++  L+ G C+AG +++A    N++ ++G  PNV  YT+L+DG CKNG ++
Sbjct: 508 ------NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A +L  ++ + G+       T L+ G  K G  +D F    KM  +G+   LY Y C +
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
             +CN   + E  ++  EM    +  + V YN LI    K   ++EA  L ++M+
Sbjct: 622 WGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 235/481 (48%), Gaps = 12/481 (2%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           L+L +MSS   A  +T    ++ G +   S      +         S+  VT + L    
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL---- 257

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV- 171
           I+ + K    + AL Y  Q +  G  P   T+N+   FV   C  D            V 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNT---FVNGLCQNDHVGHALKVMDVMVQ 314

Query: 172 ---ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + DV+++ I++   C+ G L +A  +LNQ+ + G  P++  + +LI   C    +E 
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L R++   G+    +T+ +LI  L K G        +E+M+ +G +P   TYN LI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ GK+ +   L  +M       + +TYNT+I GLCK+MR++EAE + DQM + GIS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N IT+N LIDG C   + D AF L NQ+ S G  P+ +TYN ++  + K G+ K A+D++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M   G     VTY  LI+   ++   + A ++   M+  G  P    Y  ++  L  +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIAS 527
            N+++A  LF  M E    P+ + Y ++  G C+ G   + A   + EM +KG +P  +S
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 528 Y 528
           +
Sbjct: 675 F 675



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 227/462 (49%), Gaps = 3/462 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDS--GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +  S +D++   +L D A+      L    G++  +  +N LL  +++          +S
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   + ++ DV +F  L+K  C A  +  A  +L ++   G +P+   +T+L+ G  + G
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  +  ++ E+G  AT+ T  VLI G  K G  +D   + ++   +G  P   TYN
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             ++  C    V    K+ D M       +V TYN ++  LCK  +++EA+ +L+QM   
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++ T+N LI   C     ++A  L  Q+   G SP V T+N+LI A  K G+  +A
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  EM+  G TP EVTY  LID+      + KA ++   M+ +G      TY  +I G
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC K  ++EA ++F+ M    +  N + +N +I G CK+     A  L+ +M  +GL PN
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +Y+S +   C+ G   +A  +L  M   G +  V  Y  L
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 252/558 (45%), Gaps = 42/558 (7%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSR 107
           ++++L+++M    H     ++   +        F      +L  L  LF   ++ V  + 
Sbjct: 92  LMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 151

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +++   K +L +     + +M   G++P   TFN+L+  + ++       L   E 
Sbjct: 152 LLNVLVEGS-KMKLLESV---YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + V  D  +F  L++G  E G +  A  V  ++ EMG S   V    LI+G CK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A    ++    G    Q TY   + GL +N       +  + M   G  P ++TYN +
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE----------- 335
           ++  C  G++ E   + ++M  R    ++ T+NTLI  LC   R++EA            
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 336 ------------------------RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                                   RL ++MK +G +P+ +TYN LID  C  G+  KA  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L   ++S G   S +TYN +I    K    + A ++  +M+ +GI+ + +T+  LID   
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   ++ AFE+ + M   G  P+  TY  ++   C +G++K+A+ +  +M     E + V
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y  +I G CK G +  AL++L  M  KG+ P   +Y+  +  L +     +A  L  +M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 552 LKLGLKPSVSLYNILYRA 569
            ++G  P    Y I++R 
Sbjct: 628 AEVGEPPDALTYKIVFRG 645



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 10/415 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   K+   ++A    +QM+D G  P   TFN+L+  +      ++      +  
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  DVY+F ILI   C+ GD + A  +  +++  G +P+ V Y +LID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + +   G   +  TY  +I GL K    ++  E +++M L G+S +  T+N LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + K+ + F+L ++M    +  N +TYN+++   CK+  +++A  +L+ M   G  
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A ++   ++  G  P+   YN ++++  +  N + A  L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD-DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P  +TY I+     R    +++AF+    M   GF P+  ++ +L  GL 
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 467 ---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              M      A ++   M +  L  +DV     I GY K    Y AL   G   E
Sbjct: 684 NLGMDDYFIRAIEII--MEKVDLRESDV---SAIRGYLKIRKFYDALATFGRFLE 733


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 245/470 (52%), Gaps = 8/470 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
            P + +  T + L   + D   + R++D AL     ML  G +P   T+  LL  + ++ 
Sbjct: 137 MPVAPDAYTYTPLIRVLCD---RGRVAD-ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNS 192

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            F++      E R K    ++ ++ ++I G C  G ++ A E+LN+L   GF P+ V YT
Sbjct: 193 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +L+ G C +   +  + LF ++ E   +  + T+ +LI    + G+ +   +  E+M  +
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G + +    N +I+  C +G+V + FKL ++M       + ++Y T++ GLC+  R  +A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + LL++M      PN +T+N  I   C  G  ++A  L  Q+  +G +  VVTYN L+  
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G+   A +L R M  +   P+ +TYT L+     ++ ++ A E+ + M +    P+
Sbjct: 433 FCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+ VL+   C KG ++EA +L   M E    PN + YN ++ G  K+ +S  AL LL 
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            +  KG+ P++ ++SS IG+L ++ +  EA  L + +  +G++P   +YN
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G   +V  Y +L+ G C+ G ++ A+   
Sbjct: 75  DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR--- 131

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R IG + +    +TYT LI  L   G   D     + M   G  P++ TY  L+   C  
Sbjct: 132 RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN 191

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +   + DEMR +    N+VTYN +I G+C+E RV +A  LL+++   G  P+ ++Y
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G C +   D    LF ++      P+ VT+++LIR F + G  + A  ++ +M E
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE 311

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G   +     I+I+S  +   ++ AF++ + M   G +PD  +Y  ++ GLC      +
Sbjct: 312 HGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDD 371

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L N M      PN+V +N  I   C++G   +A+ L+ +M+E G    + +Y++ + 
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVN 431

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             C  G    A  L   M     KP+   Y  L     N E
Sbjct: 432 GFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAE 469



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 192/396 (48%), Gaps = 3/396 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  D Y++  LI+  C+ G +  A  +L+ +   G  PNVV YT L++  C+N   E+A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +  ++   G      TY V+I G+ + G   D  E   ++   G  P   +Y  L+   
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +  +  +LF EM  +    N VT++ LI   C+   V+ A ++L+QM   G + N 
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
              N +I+  C  G  D AF+L N + S G +P  ++Y  +++   +A     A +L+ E
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M      P+EVT+   I    +   +E+A  +   M + G +  V TY  L++G C++G+
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +  A +LF SM     +PN + Y  ++ G C       A  L+ EM      PN+ +++ 
Sbjct: 439 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   CQ G   EA  L+ QM++ G  P++  YN L
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTL 531



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 175/362 (48%), Gaps = 3/362 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G +P+V + T LI   C+ G    A  + R     G       Y  L+ G  + G     
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                 M    V+P  YTY  LI   C+ G+V++   L D+M  R    NVVTY  L+  
Sbjct: 131 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           +C+    ++A  +LD+M+  G +PN++TYN +I+G C  G  D A  L N+L S G  P 
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            V+Y  L++    +       +L  EM E+   P+EVT+ +LI  F R   +E+A ++  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G + +     ++I+ +C +G + +A KL N M      P+ + Y  ++ G C+  
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  LL EM      PN  ++++ I +LCQ G   +A +L+ QM + G    V  YN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 565 IL 566
            L
Sbjct: 428 AL 429



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 206/417 (49%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     S+  D     F +M++    P   TF+ L+ F  +    ++        +
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E+ C     + +  I+I   C+ G ++ AF++LN +   G +P+ + YT+++ G C+   
Sbjct: 311 EHGCATNTTLCN--IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + AK L  ++        + T+   IC L + GL +      E+M  +G +  + TYN 
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ +C +G +    +LF  M  +    N +TY TL+ GLC   R+  A  L+ +M    
Sbjct: 429 LVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PNV+T+N L+  FC  G  ++A  L  Q+  +G +P+++TYN L+   +K  +S+ A 
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDAL 545

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +  +G++P  +T++ +I    + D +E+A +++ ++Q  G  P    Y  ++ GL
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C +  +  A   F  M      PN+  Y ++I G   EG    A  LL  +  +G++
Sbjct: 606 CKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 3/296 (1%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G +P +Y    LI   C  G+ S+  ++           +V  YNTL+ G C+   +  
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A RL+  M +A   P+  TY  LI   CD G    A  L + +   G  P+VVTY VL+ 
Sbjct: 130 ARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  +    + A  ++ EM  +G TP+ VTY ++I+   R   ++ A E+ + +   GF P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D  +Y  L+ GLC      +  +LF  M E    PN+V ++M+I  +C+ G   RA+++L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +M E G   N    +  I  +C+ G+  +A  LLN M   G  P    Y  + + 
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 174/377 (46%), Gaps = 22/377 (5%)

Query: 54  LLSKMSSHSHAAAQTLILKIIS-----GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
           +L +M+ H  A   TL   +I+     GR+   +F        L  +     NP T S  
Sbjct: 305 VLEQMTEHGCATNTTLCNIVINSICKQGRV-DDAFK------LLNDMGSYGCNPDTIS-- 355

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++    ++   D A    ++M+ +   P   TFN+ +  + +    ++  +     S
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS 415

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E+ C V   V ++  L+ G C  G ++ A E+      M   PN + YT+L+ G C    
Sbjct: 416 EHGCTV--GVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAER 470

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  L  ++          T+ VL+    + G  ++  E  E+M  +G +P+L TYN 
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+     +    +  +L   +  + V+ +V+T++++I  L KE R++EA +L   ++  G
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P  + YNK++ G C   E D A   F  + SNG  P+  TY +LI   +  G  K A 
Sbjct: 591 MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQ 650

Query: 406 DLVREMEERGITPSEVT 422
           DL+  +  RG+    +T
Sbjct: 651 DLLSVLCSRGVLNKNLT 667


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 243/485 (50%), Gaps = 2/485 (0%)

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
           RS L  + ++  S S  V     Y  +ID   K+   ++A  ++ +M   G+R    + N
Sbjct: 162 RSALVLVNEI--SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 219

Query: 146 SLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           S+L   +K  S+   +  F++       +V++F  L+   C+ G +N+A  + +++   G
Sbjct: 220 SILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG 279

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
            SPNVV Y ++I G C+  +I  A  +++++ + G      T+T+L+ G FK G  ++ F
Sbjct: 280 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 339

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             + +M+   + P+  T   +I   C  G+  EG  LF++   +      + YNT+I G 
Sbjct: 340 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 399

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            KE  +  A  +  +M   GI+P+ +TY  LIDGFC     D A +L N +K  G    +
Sbjct: 400 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 459

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
             Y  LI  F K  + K A +L+ E+   G++P+   Y  +I  F   +++E+A ++Y  
Sbjct: 460 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 519

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G   D+ TY  LI GL   G +  AS +   M    + P+D  + ++I G C +G 
Sbjct: 520 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 579

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A ++L +MN K ++P++  Y++ I    ++G   EA  L ++ML  GL P    Y+I
Sbjct: 580 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 639

Query: 566 LYRAK 570
           L   K
Sbjct: 640 LVNGK 644



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 217/401 (54%), Gaps = 4/401 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  +I  C + G++ +A  + + +   G S N+ + TSL+ G C  G++  A +L  +I
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E GLV  + TY+VLI G  KNG  +  FEFY +M+  G+  S+Y+ N ++  Y      
Sbjct: 172 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              F +F++     +A NV T+NTL+  LCKE ++ EA  L D++   GISPNV++YN +
Sbjct: 232 QNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C     + A +++ ++  NG +P+ VT+ +L+  + K G+ + A  +   M++  I
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P++ T  I+I    ++    +  ++++     GF P    Y  +I G   +GN+  AS 
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           ++  M E  + P+ V Y  +I G+CK  N   AL+LL +M  KGL  +I +Y + I   C
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           +      A  LLN++   GL P+  +YN +   ++  NN+E
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 255/560 (45%), Gaps = 105/560 (18%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           ++ A ++  ++ +A    ++ML  GV     T + +L   +K  +  +    F + + + 
Sbjct: 11  LLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARG 70

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC---------- 220
           VELD  ++ I +   C   +   A  +L ++   G+ P    +TS+I  C          
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 221 -------------------------CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
                                    C  G++  A +L  +I E GLV  + TY+VLI G 
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLY---------------------------------- 281
            KNG  +  FEFY +M+  G+  S+Y                                  
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF 250

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N L+   C EGK++E   L+DE+  + ++ NVV+YN +I G C++  +  A ++  +M
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK------------------------ 377
              G +PN +T+  L+DG+   G+ + AF +F+++K                        
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 378 -----------SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
                      S G  P+ + YN +I  F K GN  +AS++ REM E GITPS VTYT L
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID F + ++++ A ++ + M++ G   D+  YG LI G C + +MK A +L N +    L
Sbjct: 431 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 490

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN  +YN MI G+    N   A+ L  +M  +G+  ++ +Y+S I  L + G+   A  
Sbjct: 491 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 550

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           +  +ML  G+ P    + +L
Sbjct: 551 IHTEMLSKGILPDDRAHTVL 570



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 218/445 (48%), Gaps = 40/445 (8%)

Query: 105 KSRLY--ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           +S +Y   SI++ +LK +    A   F+  L+SG+     TFN+LL ++ K    ++   
Sbjct: 212 RSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACN 270

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            + E   K +  +V S+  +I G C   ++N A +V  ++ + GF+PN V +T L+DG  
Sbjct: 271 LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 330

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK----------M 271
           K GDIE A  +F ++ +  ++ T  T  ++I GL K G   +G + + K          M
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 272 QLN-------------------------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
             N                         G++PS  TY  LI  +C    +    KL ++M
Sbjct: 391 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           + + +  ++  Y TLI G CK   ++ A  LL++++ AG+SPN   YN +I GF +    
Sbjct: 451 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A  L+ ++ + G    + TY  LI    K+G    ASD+  EM  +GI P +  +T+L
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+        E A ++   M      P V  Y  LI G   +GN++EA +L + M +  L
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630

Query: 487 EPNDVVYNMMIFGYCK-EGNSYRAL 510
            P+++ Y++++ G  K +GN  R L
Sbjct: 631 VPDNITYDILVNGKFKGDGNFSRDL 655



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 4/328 (1%)

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+  + +  +  +  E + KM L GV+   +T + ++     EG + E  + F + + R
Sbjct: 10  ILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKAR 69

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +   Y+  +  LC +     A  LL +M+ AG  P   T+  +I      G   +A
Sbjct: 70  GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 129

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            RL + + + G+S ++     L++ +   GN + A  LV E+ E G+ P++VTY++LID 
Sbjct: 130 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 189

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++ ++EKAFE YS M+  G    VY+   ++ G     + + A  +FN   E+ L  N
Sbjct: 190 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-AN 248

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              +N ++   CKEG    A  L  E+  KG+ PN+ SY++ I   C+      A  +  
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308

Query: 550 QMLKLGLKPSVSLYNIL---YRAKNNIE 574
           +ML  G  P+   + IL   Y  K +IE
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIE 336



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 179/418 (42%), Gaps = 72/418 (17%)

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ L  K+  +G+     T  V++    K G   +  + + + +  GV      Y+  +H
Sbjct: 24  ARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVH 83

Query: 289 EYC-----------------------------------NEGKVSEGFKLFDEMRHREVAC 313
             C                                    EG V+E  +L D+M +   + 
Sbjct: 84  LLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 143

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N+    +L+ G C +  ++ A  L++++  +G+ PN +TY+ LIDG C  G  +KAF  +
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 203

Query: 374 NQLKSNGQSPS----------------------------------VVTYNVLIRAFSKAG 399
           +++K+ G   S                                  V T+N L+    K G
Sbjct: 204 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEG 263

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A +L  E+  +GI+P+ V+Y  +I    R D++  A ++Y  M  +GF+P+  T+ 
Sbjct: 264 KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 323

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +L+ G   KG+++ A  +F+ M +  + P D    ++I G CK G S+    L  +   +
Sbjct: 324 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 383

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           G VP    Y++ I    ++G    A  +  +M ++G+ PS   Y  L   +   NNI+
Sbjct: 384 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 441



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 34/280 (12%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  + ++    EA  L ++M + G++ +  T + ++      G   +A + F Q K+
Sbjct: 9   NILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKA 68

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G       Y++ +       NS  A  L+REM   G  P E T+T +I + V+  ++ +
Sbjct: 69  RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 128

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  +   M   G S ++     L+ G CM+GN++ A  L N + E+ L PN V Y+++I 
Sbjct: 129 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 188

Query: 499 GYCKEGNSYRALRLLGEMNEKGL----------------------------------VPN 524
           G CK GN  +A     EM  KG+                                  + N
Sbjct: 189 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN 248

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           + ++++ +  LC++GK  EA  L ++++  G+ P+V  YN
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 1/222 (0%)

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P++   N L+        T +A  L N++   G +    T +V++RA  K GN   A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
               + + RG+   +  Y+I +       +   A  +   M+ +G+ P   T+  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             +GN+ EA +L + M       N  V   ++ GYC +GN   AL L+ E++E GLVPN 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV-SLYNIL 566
            +YS  I   C++G   +A    ++M   G++ SV SL +IL
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/403 (33%), Positives = 214/403 (53%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +L+  +   ++KG C  G++ KA E  + +   GF  + V Y +LI+G CK G    A  
Sbjct: 145 QLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFE 204

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  K+    +      Y +++ GL K+GL  +  + Y  +   G+ P ++TY CLIH +C
Sbjct: 205 LLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFC 264

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G+  E  +L  +M  R V  NV TYN LI  LCK+  + +A  + + M   G  P+++
Sbjct: 265 GLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLV 324

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T+N L+ G+C   +  +A +LF+     G +P V +YN+LI  + K      A  L  +M
Sbjct: 325 TFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKM 384

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             + + P+ VTY+ LID   +S  +  A+E++S +   G SP+V TY +++  LC    +
Sbjct: 385 NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLV 444

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A +LFN M+E  L PN   YN++I GYCK      A+ L  EM+ + LVP+  +Y+  
Sbjct: 445 DKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           I  LC+ G+   A  L N M   G    V  YNIL+ A + I+
Sbjct: 505 IDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQ 547



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 219/445 (49%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+  F +++     P    FN +L  ++K   +        +   + +   + +  IL
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G +  AF VL  + + G+  N +  T+++ G C NG++ +A      +   G 
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +  + TY  LI GL K GL ++ FE   KM+   V P++  YN ++   C +G V+E   
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L+ ++  R +  +V TY  LI G C   + +E  RLL  M    ++ NV TYN LID  C
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   KA  + N +   GQ P +VT+N L+  +    +   A  L     E GITP   
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW 359

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y ILI  + +++ +++A  +++ M     +P++ TY  LI GLC  G +  A +LF+++
Sbjct: 360 SYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAI 419

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +    PN + YN+M+   CK     +A+ L   M E+GL PN++SY+  I   C+  + 
Sbjct: 420 HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRI 479

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            EA  L  +M +  L P    YN L
Sbjct: 480 DEAMNLFEEMHRRNLVPDSVTYNCL 504



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 192/389 (49%), Gaps = 10/389 (2%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A  +  +L  M   P+VV +  ++    K      A  L +++G  G+  +  T ++
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 251 LI---CGLFKNGLQKD--GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           LI   C L   G      G       QLN +     T   ++   C  G+V +  +  D 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAI-----TLTTIMKGLCINGEVRKALEFHDS 173

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +  +    + VTY TLI GLCK    +EA  LL +M+   + PNV+ YN ++DG C  G 
Sbjct: 174 VVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL 233

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  L++ +   G  P V TY  LI  F   G  +  + L+ +M +R +  +  TY I
Sbjct: 234 VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID+  +   + KA +M +LM + G  PD+ T+  L+ G C+  ++ EA KLF++  E  
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG 353

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + P+   YN++I GYCK      AL L  +MN K L PNI +YSS I  LC+ G+   A 
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + +   G  P+V  YNI+  A   I+
Sbjct: 414 ELFSAIHDGGPSPNVITYNIMLDALCKIQ 442



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 1/354 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K  L+ +A    H+M    VRP    +N ++  + K     +    +S+  
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVV 245

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ DV+++  LI G C  G   +   +L  + +   + NV  Y  LID  CK G + 
Sbjct: 246 GRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLG 305

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +   + E G      T+  L+ G        +  + ++     G++P +++YN LI
Sbjct: 306 KAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILI 365

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC   ++ E   LF++M ++++A N+VTY++LI GLCK  R+  A  L   +   G S
Sbjct: 366 IGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPS 425

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITYN ++D  C     DKA  LFN +   G +P+V +YN+LI  + K+     A +L
Sbjct: 426 PNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNL 485

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             EM  R + P  VTY  LID   +S  +  A+E++++M   G   DV TY +L
Sbjct: 486 FEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y  +IDA  K  +  +A    + M++ G RP   TFN+L+  + + +   +   LF +  
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFA 350

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C +  DV+S+ ILI G C+   +++A  + N++     +PN+V Y+SLIDG CK+G I 
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  I + G      TY +++  L K  L     E +  M   G++P++ +YN LI
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC   ++ E   LF+EM  R +  + VTYN LI GLCK  R+  A  L + M   G  
Sbjct: 471 NGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530

Query: 348 PNVITYNKLIDGF 360
            +VITYN L D F
Sbjct: 531 VDVITYNILFDAF 543


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 243/523 (46%), Gaps = 42/523 (8%)

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
           PR+ LC       +SS+   ++   + + D  L     D A+  F  M+ S   P    F
Sbjct: 24  PRTTLCWERSFAGASSDDCRENLSRKVLQDLKL-----DDAIGLFGDMVKSRPFPSIVEF 78

Query: 145 NSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           + LL  + K   FD       +     +  ++Y++ I I   C    L+ A  +L ++ +
Sbjct: 79  SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           +G+ P++V   SL++G C    I  A  L  ++ E+G      T+T L+ GLF++    +
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                E+M + G  P L TY  +I+  C  G+      L ++M   ++  +VV YNT+I 
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL----------- 372
           GLCK   + +A  L ++M+  GI P+V TYN LI   C+ G    A RL           
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318

Query: 373 ----FNQL---------------------KSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               FN L                     KS    P VV YN LI+ F K    +   ++
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM +RG+  + VTYT LI  F ++ D + A  ++  M   G  PD+ TY +L+ GLC 
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN++ A  +F  M +  ++ + V Y  MI   CK G       L   ++ KG+ PN+ +
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           Y++ +   C+ G   EA+ L  +M + G  P+   YN L RA+
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 9/454 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
           +S+LS  AL    +M+  G  P   T NSLL          +      +    VE+    
Sbjct: 123 RSQLS-LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ---MVEMGYQP 178

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  L+ G  +    ++A  ++ ++   G  P++V Y ++I+G CK G+ + A  L 
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+ +  + A    Y  +I GL K     D F+ + KM+  G+ P ++TYN LI   CN 
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVIT 352
           G+ S+  +L  +M  + +  ++V +N LI    KE ++ EAE+L D+M K     P+V+ 
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI GFC     ++   +F ++   G   + VTY  LI  F +A +   A  + ++M 
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G+ P  +TY IL+D    + ++E A  ++  MQK     D+ TY  +I  LC  G ++
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +   LF S+    ++PN V Y  M+ G+C++G    A  L  EM E G +PN  +Y++ I
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +DG    +  L+ +M   G     S + ++
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 218/428 (50%), Gaps = 4/428 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
           +R+S +A+    QM++ G +P + TF +L+  + +     +          K  + D+ +
Sbjct: 159 NRIS-EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G +I G C+ G+ + A  +LN++E+     +VVIY ++IDG CK   ++ A  LF K+ 
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     TY  LI  L   G   D       M    ++P L  +N LI  +  EGK+ 
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337

Query: 298 EGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           E  KL+DEM + +    +VV YNTLI G CK  RV+E   +  +M   G+  N +TY  L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GF  A + D A  +F Q+ S+G  P ++TYN+L+      GN + A  +   M++R +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
               VTYT +I++  ++  +E  ++++  +   G  P+V TY  ++ G C KG  +EA  
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF  M E    PN   YN +I    ++G+   +  L+ EM   G   + +++     +L 
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML- 576

Query: 537 QDGKWPEA 544
            DG+  ++
Sbjct: 577 HDGRLDKS 584



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 76/201 (37%), Gaps = 36/201 (17%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S    V  +  Y ++I    ++R  D A   F QM+  GV P   T+N LL  +  + + 
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442

Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI---- 212
           +   + F    +  ++LD+ ++  +I+  C+AG +   +++   L   G  PNVV     
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502

Query: 213 -------------------------------YTSLIDGCCKNGDIERAKMLFRKIGELGL 241
                                          Y +LI    ++GD   +  L +++   G 
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562

Query: 242 VATQHTYTVLICGLFKNGLQK 262
                T+ ++   L    L K
Sbjct: 563 AGDASTFGLVTNMLHDGRLDK 583


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 209/391 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G C  G+L K  +++ +++  G  PN+  Y S+I   CK+G ++ A+ + 
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++   G+V     YT LI G  K G  +  ++ +++M+   + P    Y  +I   C  
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+ E  K+F++M  R V  + VTY TLI G CK   +++A  L +QM  +G++PNV+TY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L DG C  G+ D A  L +++   G   ++ TYN L+    K+GN + A  L+ EME 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  +T+T L+D++ ++ +M KA E+   M   G  P V T+ VL++G CM G +++
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +L   M E  + PN   YN ++  YC   N      +   M  +G++P+  +Y+  I 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             C+     EA  L  +M + G   + S YN
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYN 399



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 212/393 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++Y++  +I   C++G ++ A  VL ++   G  P+ V+YT+LIDG CK G+I+ A  LF
Sbjct: 44  NLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ +  +V     YT +ICGL + G   +  + + KM   GV P   TY  LI  YC  
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ + F L ++M    +  NVVTY  L  GLCK  +V  A  LL +M   G+  N+ TY
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L++G C +G   +A +L  +++  G  P  +T+  L+ A+ K G    A +L+REM +
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+ P+ +T+ +L++ F  S  +E    + + M + G  P+  TY  L+   C++ NM+ 
Sbjct: 284 RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRC 343

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
            ++++  M    + P+   YN++I G+CK  N   A  L  EM EKG     +SY+S I 
Sbjct: 344 TTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIK 403

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +  K  EA  L  +M + G+     +YN+ 
Sbjct: 404 GFFKKKKISEARELFEEMRREGMAADAEIYNLF 436



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 196/365 (53%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G +P+VV Y+++I+G C  G++++   L +++   GL    +TY  +I  L K+G   D 
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                +M   G+ P    Y  LI  +C  G +   +KLFDEM  + +  + + Y  +ICG
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LC+  ++ EA+++ ++M   G+ P+ +TY  LIDG+C +GE +KAF L NQ+  +G +P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVTY  L     K G    A++L+ EM  +G+  +  TY  L++   +S ++ +A ++  
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M+ +G  PD  T+  L+   C  G M +A +L   M +  L+P  + +N+++ G+C  G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                 RLL  M EKG++PN  +Y+S +   C          +   M   G+ P  + YN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 565 ILYRA 569
           IL + 
Sbjct: 365 ILIKG 369



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 175/296 (59%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+  G +P + +Y+ +I+ YC  G++ +  KL  EM+ + +  N+ TYN++I  LCK  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +AER+L +M   GI P+ + Y  LIDGFC  G    A++LF++++     P  + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I    + G    A  +  +M  RG+ P EVTYT LID + +S +MEKAF +++ M +SG
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +P+V TY  L  GLC  G +  A++L + M    L+ N   YN ++ G CK GN  +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +L+ EM   G+ P+  ++++ +   C+ G+  +A  LL +ML  GL+P+V  +N+L
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 229/447 (51%), Gaps = 3/447 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I+ +       + L    +M   G++P   T+NS+++ + KS   D       E  
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N+  V  D   +  LI G C+ G++  A+++ +++E+    P+ + YT++I G C+ G +
Sbjct: 73  NQGIVP-DTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F K+   G+   + TYT LI G  K+G  +  F  + +M  +G++P++ TY  L
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
               C  G+V    +L  EM  + +  N+ TYN+L+ GLCK   +++A +L+++M++AG+
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ IT+  L+D +C  GE  KA  L  ++   G  P+V+T+NVL+  F  +G  +    
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M E+GI P+  TY  L+  +   ++M    E+Y  M   G  PD  TY +LI G C
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
              NMKEA  L   M E         YN +I G+ K+     A  L  EM  +G+  +  
Sbjct: 372 KARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAE 431

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            Y+  + +   +G    A  L ++ ++
Sbjct: 432 IYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 36/307 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + KS   ++A    +QM+ SG+ P   T+ +L   + K    D       E  
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC 212

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++L++ ++  L+ G C++G++ +A +++ ++E  G  P+ + +T+L+D  CK G++ 
Sbjct: 213 GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMV 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG----------------------- 264
           +A  L R++ + GL  T  T+ VL+ G   +G+ +DG                       
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332

Query: 265 ------------FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                        E Y+ M   GV P   TYN LI  +C    + E + L  EM  +   
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
               +YN++I G  K+ ++ EA  L ++M+  G++ +   YN  +D     G  + A  L
Sbjct: 393 LTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452

Query: 373 FNQLKSN 379
            ++   N
Sbjct: 453 CDEAIEN 459


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 223/463 (48%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+  +    DQA     +M     G  P   T+N ++  + +    +K       
Sbjct: 234 YNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   ++F  LI G    G + KA  +  ++E  G  P VV Y ++I G  ++G++
Sbjct: 294 MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A+M F ++  +GL+    TY  LI G  K G  K+    +  ++  G++PS+ TYN L
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  YC  G + E  +   EM  +    +V TY  L+ G  K   +       D+M   G+
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G T +AF+L   + S G S   VTYN+ +    K+GN K A  
Sbjct: 474 QPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYV 533

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+ P  +TYT LI +      + +A +++  M  SG  P   TY V IH  C
Sbjct: 534 LWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYC 593

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M E  + PN+V YN++I   C+ G +  A +   EM E+GL PN  
Sbjct: 594 RRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKY 653

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C++G W EA  L ++M + G+ P    +N L++ 
Sbjct: 654 TYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 230/486 (47%), Gaps = 39/486 (8%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYS 177
           S  S   L  F +M   GV P     N +L  +     +D     ++E  +  +E  + +
Sbjct: 174 STCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVT 233

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEM--GFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +  L+      G +++A ++L ++E    G  P+ V Y  +I+G  + G++E+A  L  +
Sbjct: 234 YNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +  +   A+  T+  LI G F  G  +       +M+  G+ P++ TYN +IH     G 
Sbjct: 294 M-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGN 352

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V      F EMR   +  +++TYN+LI G CK   ++EA  L   +K AG++P+V+TYN 
Sbjct: 353 VEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNI 412

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+DG+C  G+ ++A R   ++   G  P V TY +L+    K  N  M  +   EM  +G
Sbjct: 413 LLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKG 472

Query: 416 ITP-----------------------------------SEVTYTILIDSFVRSDDMEKAF 440
           + P                                     VTY I +D   +S +++ A+
Sbjct: 473 LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAY 532

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  M   G  PD  TY  LIH  C +G ++EA  +F+ M  + L P+ V Y + I  Y
Sbjct: 533 VLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAY 592

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ GN Y A     +M E+G+ PN  +Y+  I  LC+ G+   A    ++ML+ GL P+ 
Sbjct: 593 CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNK 652

Query: 561 SLYNIL 566
             Y +L
Sbjct: 653 YTYTLL 658



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 208/384 (54%), Gaps = 2/384 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAG 189
           +M + G+ P   T+N+++  + +S + +   + F E R    L D+ ++  LI G C+AG
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L +A  +   L+  G +P+V+ Y  L+DG C+ GD+E A+   +++ E G      TYT
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G  K        EF+++M   G+ P  + YN  I      G  SE F+L + M  R
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            ++ + VTYN  + GLCK   +++A  L  +M   G+ P+ ITY  LI   C+ G   +A
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             +F+ +  +G  PS VTY V I A+ + GN   A    ++M E G+ P+EVTY +LI +
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R      A++ +  M + G SP+ YTY +LI G C +GN +EA +L++ M +  + P+
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
              +N +  G+  EG S  A++ +
Sbjct: 687 HCTHNALFKGF-DEGQSKHAIQYM 709



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 134/273 (49%), Gaps = 3/273 (1%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM H  V   +   N ++  L  E R  +   +  +M   GI P+++TYN L+D F  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 363 AGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            G  D+A +L  ++  +  G  PS VTYNV+I   ++ G  + A+ LV  M       S 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASA 302

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            T+  LI  +     +EKA  +   M+  G  P V TY  +IHG+   GN++ A   F  
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L P+ + YN +I GYCK GN   AL L G++   GL P++ +Y+  +   C+ G 
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             EA     +M++ G +P VS Y IL      +
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 225/467 (48%), Gaps = 11/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S+I    K     +AL    +M   G+ P + ++N      I++C     W    E  
Sbjct: 253 YNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYN----MAIRACGRSGRWKEAVEVL 308

Query: 167 ---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  V  DV S+   IK C   G    + ++L+++   G +PN + + S I  C K 
Sbjct: 309 RQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKG 368

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G  E+A  L R++  LGL     ++   I    K+G  K+  E  ++M    + P   +Y
Sbjct: 369 GQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISY 428

Query: 284 NCLIHEYCNEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           N  I E C +G   E   +L  +M  + +  NV++ N  I    +  R QE   LL QM 
Sbjct: 429 NSAI-EACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMP 487

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G++PNVITYN  I      G+ +KA  L  ++K    +P  +TYN  I A SK G  K
Sbjct: 488 AQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWK 547

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+REM  +G+TP  ++YT  ID++ ++   E+A E+   M   G +P+V TY  +I
Sbjct: 548 EAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVI 607

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
                 G  ++A  L   + ET + P+ + YN+ I    K G    AL LL EM  +GL 
Sbjct: 608 KACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLT 667

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P++ SY+S I     +G+W +A  LLN M   G+ P+ + Y++   A
Sbjct: 668 PDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA 714



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 10/453 (2%)

Query: 123 DQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGW-----LFFSENRCKVELDVY 176
           ++AL    ++ +  GV P    +NS     I++C     W     L       +V  D  
Sbjct: 161 EKALELLREIPEQEGVSPNVFCYNS----AIEACGSGDQWEIAVSLLREMADREVVPDEI 216

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+   IK C   G   +   +L ++  +G +P+ + Y S+I GC K G  + A  +  ++
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM 276

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              GL     +Y + I    ++G  K+  E   +M+  GV+P + +Y+  I      G+ 
Sbjct: 277 SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQW 336

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                L DEM  R VA N + +N+ I    K  + ++A  LL ++   G++P+  ++N  
Sbjct: 337 ETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSA 396

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I     +G   +A  L  ++ +    P  ++YN  I A  K G  +MA +L R+M  +G+
Sbjct: 397 IAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGL 456

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP+ ++  I I +       ++  E+   M   G +P+V TY   I      G  ++A  
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALD 516

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   M E  + P+ + YN  I    K G    A+ LL EM  +GL P++ SY++ I    
Sbjct: 517 LLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYG 576

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++G+W  A  LL QM   GL P+V  YN + +A
Sbjct: 577 KNGQWERAVELLRQMPTKGLTPNVITYNSVIKA 609



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y++ I A       + ++    +M   GV P +  FNS ++   K   ++K      E  
Sbjct: 323 YDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVT 382

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  SF   I  C ++G   +A E+L ++      P+ + Y S I+ C K G  E
Sbjct: 383 ALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWE 442

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L R++   GL     +  + I    + G  ++G E   +M   G++P++ TYN  I
Sbjct: 443 MALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAI 502

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+  +   L  +M+   +  + +TYN+ I    K  R +EA  LL +M   G++
Sbjct: 503 KTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLT 562

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI+Y   ID +   G+ ++A  L  Q+ + G +P+V+TYN +I+A  + G  + A DL
Sbjct: 563 PDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDL 622

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++E++E  + P  ++Y + I +  +    E+A ++   M   G +PDV +Y   I     
Sbjct: 623 LKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNA 682

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G  ++A  L N M    + P    Y++ I    K G    A+ L+ EM ++GL     S
Sbjct: 683 EGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNIS 742

Query: 528 YSSTIGVLCQDGK 540
            S  +  L  D K
Sbjct: 743 NSLIVEALGDDAK 755



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 182/391 (46%), Gaps = 1/391 (0%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            +S+   I  C   G   KA E+L ++ E+ G SPNV  Y S I+ C      E A  L 
Sbjct: 144 AHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLL 203

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++ +  +V  + +Y   I    + G  +       +M   G++P   TYN +I     E
Sbjct: 204 REMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKE 263

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  E   +  EM  + +    ++YN  I    +  R +EA  +L QM+  G++P+VI+Y
Sbjct: 264 GQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISY 323

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           +  I      G+ + +  L +++   G +P+ + +N  I A  K G  + A +L+RE+  
Sbjct: 324 DAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTA 383

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+TP   ++   I +  +S   ++A E+   M      PD  +Y   I      G  + 
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEM 443

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M    L PN +  N+ I    + G     L LL +M  +GL PN+ +Y+S I 
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              + G+W +A  LL +M +L + P    YN
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAMTPDSITYN 534



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 134/315 (42%), Gaps = 39/315 (12%)

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVAC--------------------------------- 313
           + E    GK  E   + DEM+   V C                                 
Sbjct: 117 LREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGV 176

Query: 314 --NVVTYNTLI--CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
             NV  YN+ I  CG   +  +  A  LL +M    + P+ I+YN  I      G+ ++ 
Sbjct: 177 SPNVFCYNSAIEACGSGDQWEI--AVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  ++ S G +P  +TYN +I    K G  K A  ++ EM  +G+TP  ++Y + I +
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             RS   ++A E+   M+  G +PDV +Y   I      G  + +  L + M    + PN
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N  I    K G   +A+ LL E+   GL P+  S++S I    + G+W EA  LL 
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414

Query: 550 QMLKLGLKPSVSLYN 564
           +M    LKP    YN
Sbjct: 415 EMPAKRLKPDAISYN 429



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 37/241 (15%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTY 388
           + +EA  +LD+MK  G+     +Y   I      G+ +KA  L  ++ +  G SP+V  Y
Sbjct: 125 KWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCY 183

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N  I A       ++A  L+REM +R + P E++Y   I +  R    E+   +   M  
Sbjct: 184 NSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPS 243

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G +PD  T                                   YN +I G  KEG    
Sbjct: 244 VGLTPDAIT-----------------------------------YNSVITGCGKEGQWKE 268

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           AL +L EM+ KGL P   SY+  I    + G+W EA  +L QM   G+ P V  Y+   +
Sbjct: 269 ALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIK 328

Query: 569 A 569
           A
Sbjct: 329 A 329


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 227/464 (48%), Gaps = 69/464 (14%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F IL++G C +  L KA ++L +++EMG  P+  IY +LI G  K  D  +A    
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ +   + T  TYT ++ GL K G  KD  +  ++M+  G SP++YTYN ++   C E
Sbjct: 69  AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE------------------ 335
            K+ E  K+ +EM  R    +VVTYN+ I GLCK  RV EA                   
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTV 188

Query: 336 --------------RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
                         R+LDQM   G +P+V+TY+ LIDGFC  GE ++A  L + +   G 
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P++V YN L+ A  + G+   A D++ EME RG TP  V+Y   ID   +++ ++KA  
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308

Query: 442 MYSLMQKSGFSP-----------------------------------DVYTYGVLIHGLC 466
           ++  M + G +P                                   D+  Y VL+ GLC
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368

Query: 467 MKGNMKEASKLFNSMWETKL-EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             G   EA  LF+ + + K+ EP+   YN+M+  +CK     +AL++  +M E+    N+
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NV 427

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +++  +  LC D +  +AE +L  M+  G  P    Y  L  A
Sbjct: 428 VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 198/395 (50%), Gaps = 39/395 (9%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P+   +  L+ G C++  +E+A+ L  ++ E+G V     Y  LI G  K       F+F
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             +M  N   P++ TY  ++   C  G+  +  KL DEMR +  + N+ TYN ++ GLC+
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           E ++ EA+++L++M + G  P+V+TYN  I G C     D+A +   ++     +P VV+
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVS 184

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF------- 440
           Y  +I    K+G+   AS ++ +M  RG TP  VTY+ LID F +  ++E+A        
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 441 ----------------------------EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
                                       +M   M++ GF+PDV +Y   I GLC    +K
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A  +F+ M E    PN   Y+M++   CK+     A+ L+ +  EK  + +I  Y+  +
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGL-KPSVSLYNIL 566
             LC+ G++ EA  L +++L   + +P V  YN++
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 244/524 (46%), Gaps = 19/524 (3%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R LL +M          +   +ISG   +  F        L ++  +   P   +  Y +
Sbjct: 30  RQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG--QAFKFLAEMVKNHCLPTVVT--YTN 85

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           I+D   K+  +  A+    +M D G  P   T+N ++  + +    D+      E   + 
Sbjct: 86  IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145

Query: 172 EL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
              DV ++   IKG C+   +++A + L +   M  +P+VV YT++I+G CK+GD++ A 
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLAR---MPVTPDVVSYTTVINGLCKSGDLDSAS 202

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +  ++   G      TY+ LI G  K G  +      + M   G  P++  YN L+   
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G + +   +  EM  R    +VV+YN  I GLCK  RV++A+ + D+M   G +PN 
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV-R 409
            +Y+ L++  C   E D A  L  Q +   Q   ++ Y VL+    K G    A  L  +
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            ++E+   P    Y +++DS  +   ++KA +++  M +     +V T+ +L+HGLC+  
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDD 441

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + +A  +  +M +    P+ V Y  ++   CK G S  AL L  E  + G VP++ +YS
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN--ILYRAKN 571
           + I  L  +    EA +L  ++        V+L+N  IL  A+N
Sbjct: 502 ALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAEN 538



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 220/488 (45%), Gaps = 33/488 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I++   + R  D+A     +M   G  P   T+NS +  + K    D+   F +  R
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA--R 175

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             V  DV S+  +I G C++GDL+ A  +L+Q+   G +P+VV Y+SLIDG CK G++ER
Sbjct: 176 MPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVER 235

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L   + +LG       Y  L+  L + G      +   +M+  G +P + +YN  I 
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C   +V +   +FD M  R    N  +Y+ L+  LCK+  + +A  L++Q +      
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           +++ Y  L+DG C  G  D+A  LF++ L      P V  YNV++ +  K      A  +
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M ER    + VT+ IL+      D +  A  M   M   GF PD  TYG L+  +C 
Sbjct: 416 HKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 474

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVY----------------------------NMMIFG 499
            G    A +LF    +    P+ V Y                            N MI G
Sbjct: 475 CGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILG 534

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAEVLLNQMLKLGLKP 558
           Y + G+    L+L  E+ E  + PN  ++   I G L +     +A  L ++ +K G  P
Sbjct: 535 YAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594

Query: 559 SVSLYNIL 566
            + + N L
Sbjct: 595 DLFVANTL 602



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 203/461 (44%), Gaps = 39/461 (8%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R  L++M       + T    +I+G   S      S +  L Q+      P   +  Y S
Sbjct: 170 RKFLARMPVTPDVVSYT---TVINGLCKSGDLDSASRM--LDQMTNRGCTPDVVT--YSS 222

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCK 170
           +ID   K    ++A+     ML  G RP    +NSLL  + +     K      E  R  
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
              DV S+   I G C+A  + KA  V +++ E G +PN   Y+ L++  CK  +++ A 
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIHE 289
            L  +  E   +     YTVL+ GL K G   +    + K+    +  P ++ YN ++  
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C   ++ +  ++  +M  R   CNVVT+N L+ GLC + R+ +AE +L  M   G  P+
Sbjct: 403 HCKRRQIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 461

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY--------------------- 388
            +TY  L+D  C  G++  A  LF +    G  P VVTY                     
Sbjct: 462 FVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 521

Query: 389 -------NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS-FVRSDDMEKAF 440
                  N +I  +++ G+  +   L  E+ E  + P+  T+   I    V+++ + KA 
Sbjct: 522 KLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKAR 581

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            ++    K GF PD++    LI      G+++EA ++F SM
Sbjct: 582 GLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ++   P   T+ IL+    RS+ +EKA ++   M++ G  PD   Y  LI G     +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +A K    M +    P  V Y  ++ G CK G +  A++LL EM +KG  PNI +Y+ 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            +  LC++ K  EA+ +L +M   G  P V  YN
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYN 154


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 235/481 (48%), Gaps = 12/481 (2%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           L+L +MSS   A  +T    ++ G +   S      +         S+  VT + L    
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL---- 165

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV- 171
           I+ + K    + AL Y  Q +  G  P   T+N+   FV   C  D            V 
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNT---FVNGLCQNDHVGHALKVMDVMVQ 222

Query: 172 ---ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + DV+++ I++   C+ G L +A  +LNQ+ + G  P++  + +LI   C    +E 
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L R++   G+    +T+ +LI  L K G        +E+M+ +G +P   TYN LI 
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ GK+ +   L  +M       + +TYNT+I GLCK+MR++EAE + DQM + GIS 
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N IT+N LIDG C   + D AF L NQ+ S G  P+ +TYN ++  + K G+ K A+D++
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M   G     VTY  LI+   ++   + A ++   M+  G  P    Y  ++  L  +
Sbjct: 463 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 522

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIAS 527
            N+++A  LF  M E    P+ + Y ++  G C+ G   + A   + EM +KG +P  +S
Sbjct: 523 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 582

Query: 528 Y 528
           +
Sbjct: 583 F 583



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 228/466 (48%), Gaps = 3/466 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDS--GVRPRSNTFNSLLIFVIKSCSFDKGW 161
            K  +  S +D++   +L D A+      L    G++  +  +N LL  +++        
Sbjct: 15  VKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLE 74

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             +SE   + ++ DV +F  L+K  C A  +  A  +L ++   G +P+   +T+L+ G 
Sbjct: 75  SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 134

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            + G IE A  +  ++ E+G  AT+ T  VLI G  K G  +D   + ++   +G  P  
Sbjct: 135 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TYN  ++  C    V    K+ D M       +V TYN ++  LCK  +++EA+ +L+Q
Sbjct: 195 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 254

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI   C     ++A  L  Q+   G SP V T+N+LI A  K G+
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
             +A  L  EM+  G TP EVTY  LID+      + KA ++   M+ +G      TY  
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I GLC K  ++EA ++F+ M    +  N + +N +I G CK+     A  L+ +M  +G
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L PN  +Y+S +   C+ G   +A  +L  M   G +  V  Y  L
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 251/557 (45%), Gaps = 42/557 (7%)

Query: 51  LRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSRL 108
           +++L+++M    H     ++   +        F      +L  L  LF   ++ V  + L
Sbjct: 1   MKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 60

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
              +++   K +L +     + +M   G++P   TFN+L+  + ++       L   E  
Sbjct: 61  LNVLVEGS-KMKLLESV---YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 116

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  D  +F  L++G  E G +  A  V  ++ EMG S   V    LI+G CK G +E
Sbjct: 117 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 176

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    ++    G    Q TY   + GL +N       +  + M   G  P ++TYN ++
Sbjct: 177 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 236

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE------------ 335
           +  C  G++ E   + ++M  R    ++ T+NTLI  LC   R++EA             
Sbjct: 237 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 296

Query: 336 -----------------------RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                                  RL ++MK +G +P+ +TYN LID  C  G+  KA  L
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              ++S G   S +TYN +I    K    + A ++  +M+ +GI+ + +T+  LID   +
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ AFE+ + M   G  P+  TY  ++   C +G++K+A+ +  +M     E + V 
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  +I G CK G +  AL++L  M  KG+ P   +Y+  +  L +     +A  L  +M 
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536

Query: 553 KLGLKPSVSLYNILYRA 569
           ++G  P    Y I++R 
Sbjct: 537 EVGEPPDALTYKIVFRG 553



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 10/415 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   K+   ++A    +QM+D G  P   TFN+L+  +      ++      +  
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  DVY+F ILI   C+ GD + A  +  +++  G +P+ V Y +LID  C  G + 
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 351

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + +   G   +  TY  +I GL K    ++  E +++M L G+S +  T+N LI
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + K+ + F+L ++M    +  N +TYN+++   CK+  +++A  +L+ M   G  
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A ++   ++  G  P+   YN ++++  +  N + A  L
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 531

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDD-MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P  +TY I+     R    +++AF+    M   GF P+  ++ +L  GL 
Sbjct: 532 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 591

Query: 467 ---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              M      A ++   M +  L  +DV     I GY K    Y AL   G   E
Sbjct: 592 NLGMDDYFIRAIEII--MEKVDLRESDV---SAIRGYLKIRKFYDALATFGRFLE 641


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/394 (34%), Positives = 210/394 (53%), Gaps = 4/394 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++   +I     AGDL+ A   ++ L  MG  PNVV YT+LI    +   +E A  L 
Sbjct: 24  DAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLL 80

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ E G      TY VL+  L K  +     +  +KM   G +P++ T+N L+  +C  
Sbjct: 81  EEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKR 140

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G V +  KL   M  + +  NVVTY+ LI GLCK  +  EA+ +L++MK +G++P+  TY
Sbjct: 141 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTY 200

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + LI G C A + ++A ++  ++  +G +P VV Y+ +I AF K+G    A   ++EM +
Sbjct: 201 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 260

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG-FSPDVYTYGVLIHGLCMKGNMK 472
           +  +P  VTY  +ID   +   + +A  +   MQ+SG   PDV TY  +I+GLC    + 
Sbjct: 261 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLV 320

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA KL + M +    P+ V Y  +I G CK G    A  LL  M   G  PN+ +Y++ I
Sbjct: 321 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 380

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  K  EAE ++ +M   G  P++  YN +
Sbjct: 381 SGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 414



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 225/448 (50%), Gaps = 5/448 (1%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL    +M  +G  P + T   ++  +  +   D          C  + +V ++  LI  
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC--DPNVVTYTALIAA 66

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
              A  L +A ++L ++ E G  PN+V Y  L+D  CK   +  A+ + +K+ E G    
Sbjct: 67  FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             T+  L+ G  K G   D  +    M   G+ P++ TY+ LI   C   K  E  ++ +
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM+   V  +  TY+ LI GLCK  +++EAE++L +M  +G +P+V+ Y+ +I  FC +G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEVTY 423
           +  +A +   +++   +SP VVTYN +I    K G    A  ++ +M+E G + P  VTY
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + +I+   +SD + +A ++   M K+G +PDV TY  +I GLC  G ++EA  L   M  
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
               PN V Y  +I G CK      A R++ EM   G  PN+ +Y++ +  LC  G+  E
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426

Query: 544 AEVLLNQML--KLGLKPSVSLYNILYRA 569
           A+ L+ +M   +    P  + Y  +  A
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNA 454



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 227/447 (50%), Gaps = 7/447 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  II A   +   D A+ +   M   G  P   T+ +L+    ++   ++      E R
Sbjct: 28  HTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMR 84

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +    ++ ++ +L+   C+   +  A +V+ ++ E GF+PNV+ + SL+DG CK G+++
Sbjct: 85  ERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD 144

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L   +   G+     TY+ LI GL K+    +  E  E+M+ +GV+P  +TY+ LI
Sbjct: 145 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALI 204

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K+ E  ++   M       +VV Y+++I   CK  ++ EA++ L +M+    S
Sbjct: 205 HGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 264

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGNSKMASD 406
           P+V+TYN +IDG C  G+  +A  + +Q++ +G   P VVTY+ +I    K+     A  
Sbjct: 265 PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 324

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M + G  P  VTYT +ID   +   +E+A  +   M+++G +P+V TY  LI GLC
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE--KGLVPN 524
               + EA ++   M      PN V YN M+ G C  G    A +L+  M +      P+
Sbjct: 385 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPD 444

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQM 551
            A+Y + +  L       EAE LL QM
Sbjct: 445 AATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 179/347 (51%), Gaps = 4/347 (1%)

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C  GD+  A  L  ++   G      T+T +I  +   G      +    M   G  P++
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +    K+ E  KL +EMR R    N+VTYN L+  LCK   V  A+ ++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G +PNV+T+N L+DGFC  G  D A +L   + + G  P+VVTY+ LI    K+  
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +++ EM+  G+TP   TY+ LI    ++D +E+A +M   M  SG +PDV  Y  
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +IH  C  G + EA K    M + +  P+ V YN +I G CK G    A  +L +M E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 521 -LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++P++ +YS+ I  LC+     EA+ LL++M K G  P V  Y  +
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 133/244 (54%), Gaps = 3/244 (1%)

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C    +  A  LL++MK AG +P+  T+  +I    +AG+ D A    + L+S G  P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNV 57

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTY  LI AF++A   + A  L+ EM ERG  P+ VTY +L+D+  +   +  A ++   
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M + GF+P+V T+  L+ G C +GN+ +A KL   M    + PN V Y+ +I G CK   
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A  +L EM   G+ P+  +YS+ I  LC+  K  EAE +L +M   G  P V +Y+ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 566 LYRA 569
           +  A
Sbjct: 238 IIHA 241


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 215/403 (53%), Gaps = 1/403 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G  P + T N+L+  +       K   F  +   +  +L+  S+G LI G C+ G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 178

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A ++L +++     PNVV+Y+++ID  CK   +  A  LF ++   G+ A   TY+
Sbjct: 179 DTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI G    G  K+      +M L  ++P++YTYN L+   C EGKV E   +   M   
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V+TY+TL+ G      V++A+ + + M + G++P+V TY  LI+GFC     D+A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P +VTY+ LI    K+G      DL+ EM +RG   + +TY+ LID 
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDG 418

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A  +++ M+  G  P+ +T+ +L+ GLC  G +K+A ++F  +       N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
              YN+MI G+CK+G    AL +L +M + G +P+  ++   I
Sbjct: 479 VYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 250/517 (48%), Gaps = 24/517 (4%)

Query: 59  SSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
           SSHSH  +Q   ++ +   +  S F    +LC         + P+ +   +  I+D+  K
Sbjct: 25  SSHSHFHSQPPSIQNVDDAV--SQFN--RMLCM------RHTPPIIQ---FNKILDSFAK 71

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----- 173
            +    A+   H++   G++P   T N L+     +C    G + F  +     L     
Sbjct: 72  MKHYSTAVSLSHRLELKGIQPDLITLNILI-----NCFCHMGQITFGFSVLAKILKRGYP 126

Query: 174 -DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            D  +   LIKG C  G + KA    ++L   GF  N V Y +LI+G CK GD   A  L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            +KI           Y+ +I  L K  L  + +  + +M + G+S  + TY+ LI+ +C 
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EGK+ E   L +EM  + +  NV TYN L+  LCKE +V+EA+ +L  M  A + P+VIT
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y+ L+DG+    E  KA  +FN +   G +P V TY +LI  F K      A +L +EM 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ++ + P  VTY+ LID   +S  +   +++   M   G   +V TY  LI GLC  G++ 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A  LFN M +  + PN   + +++ G CK G    A  +  ++  KG   N+ +Y+  I
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              C+ G   EA  +L++M   G  P    + I+  A
Sbjct: 487 DGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 171/329 (51%), Gaps = 1/329 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IIDA  K +L  +A   F +M   G+     T+++L+          +     +E 
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  +VY++ IL+   C+ G + +A  VL  + +    P+V+ Y++L+DG     ++
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A+ +F  +  +G+    HTYT+LI G  KN +  +    +++M    + P + TY+ L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++   + L DEM  R    NV+TY++LI GLCK   +  A  L ++MK  GI
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  T+  L+DG C  G    A  +F  L + G   +V TYNV+I    K G  + A  
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++ +ME+ G  P  VT+ I+I +  + D+
Sbjct: 501 MLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 135/249 (54%), Gaps = 4/249 (1%)

Query: 171  VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            ++ D+++  ILI   C  G +   F +L ++ + G+ P+ + +T+LI+G C  G + +A 
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 231  MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                K+   G    Q +Y  LI G+ K G  +   +   K+      P +  YN +I   
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 291  CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
            C    VS+ + LF EM  + ++ +VVTYNTLI G C   +++EA  LL++M +  I+PNV
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 351  ITYNKLIDGFCDAGET--DKAFRLFNQLKSNGQSPSVVTYNVLIRA-FSKAGNSKMASDL 407
             TYN L+D  C  G+   D++  + ++++ NG   + VT+ ++I A F K  N K+   L
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK-L 1195

Query: 408  VREMEERGI 416
            + EM  RG+
Sbjct: 1196 LHEMIARGL 1204



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 37/290 (12%)

Query: 269  EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
             +++L G+ P L+T N LI+ +C+ G+++  F +  ++  R                   
Sbjct: 950  HRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKR------------------- 990

Query: 329  MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
                            G  P+ IT+  LI+G C  G+ +KA    ++L + G   + V+Y
Sbjct: 991  ----------------GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSY 1034

Query: 389  NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
              LI    K G+++ A  L+R+++ R   P  V Y  +ID+  +   + KA+ ++  M  
Sbjct: 1035 GTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNV 1094

Query: 449  SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY- 507
             G S DV TY  LI+G C+ G +KEA  L N M    + PN   YN+++   CKEG    
Sbjct: 1095 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLL 1154

Query: 508  -RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
              +L +L +M + G   N  ++   I  L +  +  + E LL++M+  GL
Sbjct: 1155 DESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 2/260 (0%)

Query: 194  AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            A  + ++LE  G  P++     LI+  C  G I     +  KI + G      T+T LI 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 254  GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            GL   G       F++K+   G   +  +Y  LI+  C  G      KL  ++  R    
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 314  NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
            +VV YNT+I  LCK   V +A  L  +M + GIS +V+TYN LI GFC  G+  +A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 374  NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL--VREMEERGITPSEVTYTILIDSFV 431
            N++     +P+V TYN+L+ A  K G   +   L  + +ME+ G   + VT+ I+I +  
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 432  RSDDMEKAFEMYSLMQKSGF 451
              D+ +K  ++   M   G 
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 102/201 (50%)

Query: 369  AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
            A  L ++L+  G  P + T N+LI  F   G       ++ ++ +RG  P  +T+T LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 429  SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
                   + KA   +  +   GF  +  +YG LI+G+C  G+ + A KL   +     +P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 489  NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            + V+YN +I   CK     +A  L  EMN KG+  ++ +Y++ I   C  GK  EA  LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 549  NQMLKLGLKPSVSLYNILYRA 569
            N+M+   + P+V  YNIL  A
Sbjct: 1125 NKMVLKTINPNVRTYNILVDA 1145



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 7/137 (5%)

Query: 138  RPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
            +P    +N+++  + K     K + LFF  N   +  DV ++  LI G C  G L +A  
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 197  VLNQLEEMGFSPNVVIYTSLIDGCCKNGD--IERAKMLFRKIGELGLVATQHTYTVLICG 254
            +LN++     +PNV  Y  L+D  CK G   ++ +  +  K+ + G  A   T+ ++I  
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182

Query: 255  LFKNGLQKDGFEFYEKM 271
            LF    +KD  +  EK+
Sbjct: 1183 LF----EKDENDKVEKL 1195


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 235/481 (48%), Gaps = 12/481 (2%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           ++L +MSS   A  +T    ++ G +   S      +         S+  VT + L    
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL---- 257

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV- 171
           I+ + K    + AL Y  Q +  G  P   T+N+   FV   C  D            V 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNT---FVNGLCQNDHVGHALKVMDVMVQ 314

Query: 172 ---ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + DV+++ I++   C+ G L +A  +LNQ+ + G  P++  + +LI   C    +E 
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L R++   G+    +T+ +LI  L K G        +E+M+ +G +P   TYN LI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ GK+ +   L  +M       + +TYNT+I GLCK+MR++EAE + DQM + GIS 
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N IT+N LIDG C   + D AF L NQ+ S G  P+ +TYN ++  + K G+ K A+D++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M   G     VTY  LI+   ++   + A ++   M+  G  P    Y  ++  L  +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIAS 527
            N+++A  LF  M E    P+ + Y ++  G C+ G   + A   + EM +KG +P  +S
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674

Query: 528 Y 528
           +
Sbjct: 675 F 675



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 227/462 (49%), Gaps = 3/462 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDS--GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +  S +D++   +L D A+      L    G++  +  +N LL  +++          +S
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   + ++ DV +F  L+K  C A  +  A  +L ++   G +P+   +T+L+ G  + G
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEG 230

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  +  ++ E+G  AT+ T  VLI G  K G  +D   + ++   +G  P   TYN
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             ++  C    V    K+ D M       +V TYN ++  LCK  +++EA+ +L+QM   
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++ T+N LI   C     ++A  L  Q+   G SP V T+N+LI A  K G+  +A
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  EM+  G TP EVTY  LID+      + KA ++   M+ +G      TY  +I G
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC K  ++EA ++F+ M    +  N + +N +I G CK+     A  L+ +M  +GL PN
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +Y+S +   C+ G   +A  +L  M   G +  V  Y  L
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 252/558 (45%), Gaps = 42/558 (7%)

Query: 50  ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSR 107
           ++++L+++M    H     ++   +        F      +L  L  LF   ++ V  + 
Sbjct: 92  LMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 151

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +++   K +L +     + +M   G++P   TFN+L+  + ++       +   E 
Sbjct: 152 LLNVLVEGS-KMKLLESV---YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + V  D  +F  L++G  E G +  A  V  ++ EMG S   V    LI+G CK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A    ++    G    Q TY   + GL +N       +  + M   G  P ++TYN +
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE----------- 335
           ++  C  G++ E   + ++M  R    ++ T+NTLI  LC   R++EA            
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 336 ------------------------RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                                   RL ++MK +G +P+ +TYN LID  C  G+  KA  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L   ++S G   S +TYN +I    K    + A ++  +M+ +GI+ + +T+  LID   
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   ++ AFE+ + M   G  P+  TY  ++   C +G++K+A+ +  +M     E + V
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y  +I G CK G +  AL++L  M  KG+ P   +Y+  +  L +     +A  L  +M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627

Query: 552 LKLGLKPSVSLYNILYRA 569
            ++G  P    Y I++R 
Sbjct: 628 AEVGEPPDALTYKIVFRG 645



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 10/415 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   K+   ++A    +QM+D G  P   TFN+L+  +      ++      +  
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  DVY+F ILI   C+ GD + A  +  +++  G +P+ V Y +LID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L + +   G   +  TY  +I GL K    ++  E +++M L G+S +  T+N LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + K+ + F+L ++M    +  N +TYN+++   CK+  +++A  +L+ M   G  
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A ++   ++  G  P+   YN ++++  +  N + A  L
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD-DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P  +TY I+     R    +++AF+    M   GF P+  ++ +L  GL 
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 467 ---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              M      A ++   M +  L  +DV     I GY K    Y AL   G   E
Sbjct: 684 NLGMDDYFIRAIEII--MEKVDLRESDV---SAIRGYLKIRKFYDALATFGRFLE 733


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 217/446 (48%), Gaps = 6/446 (1%)

Query: 88   LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
            L C + Q     S P+     +  ++ A  K    D  ++ FH+M + G+     +F  L
Sbjct: 602  LFCEMLQ-----SRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 148  LIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            +    +   F        +  +   +  + + G L+ G C+     +A  +++ + E+G 
Sbjct: 657  IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 207  SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
             PNVVIY ++I+G CKN D+  A  +F  + + G+VA   TY  LI GL  +G   D   
Sbjct: 717  EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 267  FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
                M    + P++  +  LI  +  EG + E   L+ EM  R V  N++TYN+LI G C
Sbjct: 777  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 327  KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
             + R+ +A+ + D M   G  P+V+TYN LI GFC +   +   +LF ++   G      
Sbjct: 837  IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 387  TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            TYN LI  + +AG   +A  +   M + G+ P  VTY IL+D    +  +EKA  M   +
Sbjct: 897  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956

Query: 447  QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            QK+    D+ TY ++I G+C    +KEA  LF S+    ++ + + Y  MI G C+ G  
Sbjct: 957  QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016

Query: 507  YRALRLLGEMNEKGLVPNIASYSSTI 532
              A +L   M E G +P+   Y  T+
Sbjct: 1017 READKLCTRMKEDGFMPSERIYDETL 1042



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 219/443 (49%), Gaps = 1/443 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGIL 181
            D A   F +ML S   P    F  +L  + K   FD   +LF       +  D+YSF IL
Sbjct: 597  DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I   C     + A  +L ++ ++GF P++V   SL++G C+    + A  L   + ELGL
Sbjct: 657  IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 242  VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                  Y  +I GL KN    +  E +  M+  G+     TYN LI   CN G+ ++  +
Sbjct: 717  EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 302  LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            L  +M  R++  NV+ +  LI    KE  + EA+ L  +M    + PN++TYN LI+GFC
Sbjct: 777  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 362  DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              G    A  +F+ + S G  P VVTYN LI  F K+   +    L  EM  +G+     
Sbjct: 837  IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 422  TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            TY  LI  + ++  +  A ++++ M   G  PD+ TY +L+  LC  G +++A  +   +
Sbjct: 897  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             + +++ + + YN++I G C+      A  L   +  KG+  +  +Y + I  LC++G  
Sbjct: 957  QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016

Query: 542  PEAEVLLNQMLKLGLKPSVSLYN 564
             EA+ L  +M + G  PS  +Y+
Sbjct: 1017 READKLCTRMKEDGFMPSERIYD 1039



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 226/471 (47%), Gaps = 15/471 (3%)

Query: 96  FPSSSNPVTKSRLY----ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           +PSS    + +R Y    E +    L S   + AL  F +M+ S   P    F  LL  +
Sbjct: 17  YPSSGGGAS-ARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAI 75

Query: 152 IKSCSFDKGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
                ++   ++FS+   ++EL     D+YSF ILI   C    L+ A  +L ++ ++G+
Sbjct: 76  ANLRRYET-VIYFSQ---QMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGY 131

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P++V + SL+ G C    I  A  L   + + G       Y  LI  L KNG      E
Sbjct: 132 DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALE 191

Query: 267 FYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              +M+  G ++  L TYN L+   C  G+  +  ++  +M  R +  +V T+  LI   
Sbjct: 192 LLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAF 251

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            K+  + EA+ L  QM  + I PN +TYN LI+G C  G    A + F+ + S G  P+V
Sbjct: 252 VKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNV 311

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN LI  F K+   +    L + M   G+     TY  LI  + +   +  A +++S 
Sbjct: 312 VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G +PD+ T+ +L+HGLC+ G +  A   FN M   +     V YN+MI G CK   
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADK 431

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
              A  L   +  +G+ P+  +Y+  I  LC++G   EA+ L  +M + G+
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 208/426 (48%), Gaps = 4/426 (0%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S P+     +  ++ A    R  +  +++  QM   G+     +F ++LI     CS   
Sbjct: 59  SQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSF-TILIHCFCRCSRLS 117

Query: 160 GWLFFSENRCKVELD--VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             L       K+  D  + +FG L+ G C    ++ AF ++  + + G+ PNVV+Y +LI
Sbjct: 118 LALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLI 177

Query: 218 DGCCKNGDIERAKMLFRKIGELG-LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           D  CKNGD+  A  L  ++ + G L A   TY  L+ GL  +G  +        M    +
Sbjct: 178 DCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           +P ++T+  LI  +  +G + E  +L+ +M    +  N VTYN+LI GLC   R+  A++
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
             D M   G  PNV+TYN LI+GFC +   +   +LF ++   G      TYN LI  + 
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYC 357

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G  ++A D+   M   G+TP  +T+ IL+     + ++  A   ++ M+       + 
Sbjct: 358 QVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIV 417

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            Y ++IHGLC    ++EA +LF  +    ++P+   Y +MI G CK G    A  L   M
Sbjct: 418 AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM 477

Query: 517 NEKGLV 522
            E G++
Sbjct: 478 KEDGII 483



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 163/300 (54%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            + KM+  G+S  LY++  LIH +C   + S    L  +M       ++VT  +L+ G C
Sbjct: 637 LFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFC 696

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  R QEA  L+D M   G+ PNV+ YN +I+G C   + + A  +F  ++  G     V
Sbjct: 697 QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV 756

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN LI     +G    A+ L+R+M +R I P+ + +T LID+FV+  ++ +A  +Y  M
Sbjct: 757 TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    P++ TY  LI+G C++G + +A  +F+ M      P+ V YN +I G+CK    
Sbjct: 817 IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++L  EM  +GLV +  +Y++ I   CQ GK   A+ + N+M+  G+ P +  YNIL
Sbjct: 877 EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 182/381 (47%), Gaps = 10/381 (2%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            + AF +  ++ +    P++V +T ++    K    +    LF K+  LG+    +++T+
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 251 LI-----CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           LI     C  F   L   G     KM   G  PS+ T   L++ +C   +  E   L D 
Sbjct: 656 LIHCFCRCSRFSLALALLG-----KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDS 710

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    +  NVV YNT+I GLCK   +  A  +   M+  GI  + +TYN LI G C++G 
Sbjct: 711 MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGR 770

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A RL   +      P+V+ +  LI  F K GN   A +L +EM  R + P+ +TY  
Sbjct: 771 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI+ F     +  A  M+ LM   G  PDV TY  LI G C    +++  KLF  M    
Sbjct: 831 LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L  +   YN +I GYC+ G    A ++   M + G+ P+I +Y+  +  LC +GK  +A 
Sbjct: 891 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
           V++  + K  +   +  YNI+
Sbjct: 951 VMVEDLQKNQMDVDIITYNII 971



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 212/498 (42%), Gaps = 60/498 (12%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE-LDVYSFGILIKGCCE 187
           F  M+  GV P   T   LL  +  +       + F++ R   + L + ++ I+I G C+
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI----------- 236
           A  + +A+E+  +L   G  P+   YT +I G CKNG    A  LFR++           
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAED 488

Query: 237 GELGLVATQHTY---TVLICGLFKNGLQKDG--FEFYEKM----QLNGVSP--------S 279
           G LG   T +     T++IC   +  + + G  + +Y        L G+ P         
Sbjct: 489 GHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKG 548

Query: 280 LYTYNCLIHEYCNEG-------------------------------KVSEGFKLFDEMRH 308
               + L+ E  N                                 K  + F LF EM  
Sbjct: 549 FVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQ 608

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                ++V +  ++  + K  +      L  +M+  GIS ++ ++  LI  FC       
Sbjct: 609 SRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSL 668

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  ++   G  PS+VT   L+  F +    + A  LV  M E G+ P+ V Y  +I+
Sbjct: 669 ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              ++ D+  A E++  M+K G   D  TY  LI GLC  G   +A++L   M + K++P
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N + +  +I  + KEGN   A  L  EM  + + PNI +Y+S I   C  G+  +A+ + 
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 549 NQMLKLGLKPSVSLYNIL 566
           + M+  G  P V  YN L
Sbjct: 849 DLMVSKGCFPDVVTYNTL 866



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 232/542 (42%), Gaps = 80/542 (14%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+  SS  P T +  Y S+I+          A   F  M   G  P   T+N+L+    K
Sbjct: 266 QMLQSSIGPNTVT--YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323

Query: 154 SCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
           S   + G  LF    R  +  D +++  LI G C+ G L  A ++ + +   G +P+++ 
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383

Query: 213 YTSLIDGCCKNGDIERAKMLFRKI--GE--LGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +  L+ G C NG+I  A + F  +  GE  LG+VA    Y ++I GL K    ++ +E +
Sbjct: 384 HCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVA----YNIMIHGLCKADKVEEAWELF 439

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-------------NV 315
            ++ + GV P   TY  +I   C  G   E  +LF  M+   + C             N 
Sbjct: 440 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQ 499

Query: 316 VTYNTLICGLCKEMR--VQEAERLL----DQM---KMAGISPNVITYNKLIDGFC----- 361
           V+  T+I  +C + R  + E+  L     D      + G+ P  I  +  + GF      
Sbjct: 500 VSLGTII--ICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIP--IASSSSVKGFVRRHLL 555

Query: 362 --DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
             + G   ++ R F+    +        Y   +R+         A  L  EM +    PS
Sbjct: 556 LLERGNNPES-RSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPS 614

Query: 420 EVTYT-------------ILIDSFVRSDDMEKAFEMYSL--------------------- 445
            V +T             I+I  F + +++  + ++YS                      
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674

Query: 446 -MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M K GF P + T G L++G C     +EA  L +SM E  LEPN V+YN +I G CK  
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL +   M +KG+V +  +Y++ I  LC  G+W +A  LL  M+K  + P+V  + 
Sbjct: 735 DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFT 794

Query: 565 IL 566
            L
Sbjct: 795 AL 796



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 5/312 (1%)

Query: 103  VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
            V  +  Y ++I     S     A      M+   + P    F +L+   +K  +  +   
Sbjct: 752  VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811

Query: 163  FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             + E  R  V  ++ ++  LI G C  G L  A  + + +   G  P+VV Y +LI G C
Sbjct: 812  LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFC 871

Query: 222  KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
            K+  +E    LF ++   GLV    TY  LI G  + G      + + +M   GV P + 
Sbjct: 872  KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 282  TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            TYN L+   CN GK+ +   + ++++  ++  +++TYN +I G+C+  +V+EA  L   +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 342  KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               G+  + I Y  +I G C  G   +A +L  ++K +G  PS   Y+  +R       +
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY----T 1047

Query: 402  KMASDLVREMEE 413
             ++++L++ + E
Sbjct: 1048 SLSAELIKAVHE 1059



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 1/216 (0%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF  +   + A  LF ++  +   PSVV +  L+ A +     +      ++ME  
Sbjct: 35  KLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELF 94

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           GI+    ++TILI  F R   +  A  +   M K G+ P + T+G L+HG C++  + +A
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG-LVPNIASYSSTIG 533
             L  SM ++  EPN VVYN +I   CK G+   AL LL EM +KG L  ++ +Y++ + 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC  G+W +A  +L  M K  + P V  +  L  A
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDA 250


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 231/434 (53%), Gaps = 2/434 (0%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           V P   ++N ++  + K   FD+ + ++    + +   D+Y++  LI G C +G+L+ A 
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 285

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V  ++ E G SP+VV+Y ++++G  + G IE    L++ + + G   T  +Y +LI GL
Sbjct: 286 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGL 344

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F+N    +    +E +          TY  L+H  C  G +++   + +E  +     + 
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 404

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             Y+++I GLC+E R+ E   +LDQM   G  PN    N +I+GF  A + + A R F  
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN 464

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + S G  P+VVTYN LI   SKA     A  LV+EM ++G  P+ +TY++L++   +   
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A  ++    + GF PDV  + ++IHGLC  G +++A +L++ M +    PN V +N 
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+ K  +  RA ++   + + GL P+I SY+ T+  LC   +  +A   LN  +  G
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644

Query: 556 LKPSVSLYNILYRA 569
           + P+   +NIL + 
Sbjct: 645 VLPTAITWNILVQG 658



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 273/535 (51%), Gaps = 28/535 (5%)

Query: 40  LQHTPQSISI--ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFP 97
           +   P+S+S   +++LL S+ + HS  +    I   ++ R    S TP      L +LF 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALS----IFDSVT-RFPGYSHTPYVFHHILKRLF- 54

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCS 156
              +P       + +  A+ K+ + DQAL  F +M +  G +P   ++NSLL  +I+S  
Sbjct: 55  ---DP-------KLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 104

Query: 157 FDKG---WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           +D+    +L+F        L  Y+  ILIK  C     +KA E+LN +   GFSP+V  Y
Sbjct: 105 WDEAESFFLYFETMGLSPNLQTYN--ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSY 162

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            +LI+   KNG +  A  LF ++ E G+      Y +LI G FK G   +  E +E++ L
Sbjct: 163 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL-L 221

Query: 274 NG--VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
            G  V P++ +YN +I+  C  GK  E F+++  M+  E   ++ TY+TLI GLC    +
Sbjct: 222 KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNL 281

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             A R+  +M   G+SP+V+ YN +++G+  AG  ++   L+  ++  G   +VV+YN+L
Sbjct: 282 DGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNIL 340

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           IR   +      A  +   + E+      +TY +L+    ++  + KA  +    +    
Sbjct: 341 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 400

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             D + Y  +I+GLC +G + E + + + M +   +PN  V N +I G+ +      ALR
Sbjct: 401 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             G M  KG  P + +Y++ I  L +  ++ EA  L+ +ML+ G KP++  Y++L
Sbjct: 461 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLL 515



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 193/399 (48%), Gaps = 14/399 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
           Y ++I     S   D A   + +M ++GV P    +N++L   +++   ++    W    
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           +  C+    V S+ ILI+G  E   +++A  +   L E     + + Y  L+ G CKNG 
Sbjct: 328 KEGCRT---VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384

Query: 226 IERAKMLFRKI----GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + +A  +  +     G+L   A    Y+ +I GL + G   +     ++M  +G  P+ Y
Sbjct: 385 LNKALSILEEAENGRGDLDTFA----YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
             N +I+ +    K+ +  + F  M  +     VVTYNTLI GL K  R  EA  L+ +M
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G  PN+ITY+ L++G C   + D A  L+ Q    G  P V  +N++I     +G  
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L  EM++R   P+ VT+  L++ F +  D E+A +++  + + G  PD+ +Y + 
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           + GLC    + +A    N   +  + P  + +N+++ GY
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 5/293 (1%)

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERL 337
           L+    + H Y       +   +F  M H    C   + +YN+L+  L +  +  EAE  
Sbjct: 53  LFDPKLVAHAYAKNSMPDQALDIFQRM-HEIFGCQPGIRSYNSLLNALIESNKWDEAESF 111

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
               +  G+SPN+ TYN LI   C   + DKA  L N +   G SP V +Y  LI + +K
Sbjct: 112 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAK 171

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSGFSPDVY 456
            G    A  L  EM ERG+TP    Y ILID F +  D+  A E++  L++     P++ 
Sbjct: 172 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIP 231

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           +Y V+I+GLC  G   E+ ++++ M + +   +   Y+ +I G C  GN   A R+  EM
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            E G+ P++  Y++ +    + G+  E   L   M K G +  VS YNIL R 
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRG 343



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 164/362 (45%), Gaps = 41/362 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           +Y ++++ +L++   ++ L  +  M   G R    ++N L+  + ++   D+    W   
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 360

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C    D  ++G+L+ G C+ G LNKA  +L + E      +   Y+S+I+G C+ G
Sbjct: 361 PEKDCCA--DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 418

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++    +  ++ + G     +    +I G  +    +D   F+  M   G  P++ TYN
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 478

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY-------------------------- 318
            LI+      + SE + L  EM  +    N++TY                          
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 538

Query: 319 ---------NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
                    N +I GLC   +V++A +L  +MK     PN++T+N L++GF    + ++A
Sbjct: 539 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERA 598

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++++ +   G  P +++YN+ ++          A   + +  +RG+ P+ +T+ IL+  
Sbjct: 599 SKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658

Query: 430 FV 431
           ++
Sbjct: 659 YL 660


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           +I A+ +   S  A   F+Q       P  + F  L+  ++ S  F++  L + +   K 
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            +LD +++ +LI+    +G L+ A E+  +++  G  P+   Y  L++   K G ++ A+
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             F  + E GL     TY +L+    K G        + +M+  G  PS+ TYN L+   
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ G+V    KLF +M     + +  TY+TL+ GL K  RV+EA ++  +M   G++ ++
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + YN L+     AG  D+ ++L  ++   G  P   ++N ++ A  KA     A ++   
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G  P  ++Y ILIDS+ R  D  +A +M   M ++GF P+  TY  LIH L   G 
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA  +   M      P+ V YN ++    K G + RA RL  +M +KG+ P+  SY+ 
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
            I  L  D +  EA VL   M  +G     ++Y IL RA +
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAH 496



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 191/434 (44%), Gaps = 36/434 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +ID  + S   ++A   + +++  G +     +N L+ +  +S   D     F E +
Sbjct: 68  FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  E D Y++G L+    +AG + +A    + + E G +PN+  Y  L+D   K G ++
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++   G   +  TY +L+  L   G      + + KM  +G SP  YTY+ L+
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI- 346
           +     G+V E  K+F EM  R VA ++V YN+L+  L K   +    +L+ +M   G  
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307

Query: 347 ----------------------------------SPNVITYNKLIDGFCDAGETDKAFRL 372
                                              P++I+YN LID +   G+  +A ++
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM 367

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++   G  P   TYN LI   +  G    A  ++ EME  G  P  VTY  L+D   +
Sbjct: 368 LEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGK 427

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             + ++A  ++  M+  G  PD  +Y V I GL     + EA  LF  M       +  +
Sbjct: 428 RGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAM 487

Query: 493 YNMMIFGYCKEGNS 506
           Y ++I    + G++
Sbjct: 488 YRILIRAAHRAGDT 501



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 161/321 (50%)

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +T   LI    +     D F+ + + +    SP+++ +  LI    N G+      ++ +
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +  +    +   YN LI    +  ++  A  +  +MK+ G  P+  TY  L++    AG 
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A   F+ +   G +P++ TYN+L+ AF K G   MA  L  EM+ RG  PS VTY I
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+D+   +  +  A +++  M   G SPD YTY  L++GL   G ++EA K+F  M +  
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +  + V YN ++    K GN  R  +L+ EM+ KG  P+  S+++ +  L +  K   A 
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            +  +M++ G KP +  YNIL
Sbjct: 331 EVFARMVESGCKPDLISYNIL 351



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 182/370 (49%), Gaps = 1/370 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +++A  K+    +A  +F  ML+ G+ P   T+N L+    K    D     F+E  
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R   +  V ++ IL+   C AG +  A ++ +++   G SP+   Y++L++G  K+G +E
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +FR++ + G+      Y  L+  L K G     ++  ++M   G  P  +++N ++
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  K     ++F  M       ++++YN LI    +     +A ++L++M  AG  
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P   TYN LI      G+ D+AF +  ++++ G  P VVTYN L+    K G ++ A+ L
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M+++G+ P  ++Y + ID     D +++A  ++  M+  G   D   Y +LI     
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497

Query: 468 KGNMKEASKL 477
            G+ +  ++L
Sbjct: 498 AGDTELEAQL 507



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 1/303 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++DA   +     A   FH+M   G  P S T+++L+  + KS   ++    F E  
Sbjct: 208 YNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMV 267

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V +D+ ++  L+    +AG++++ ++++ ++   GF P+   + +++D   K    +
Sbjct: 268 DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPD 327

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F ++ E G      +Y +LI    + G      +  E+M   G  P   TYN LI
Sbjct: 328 AAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLI 387

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H    +G+V E F + +EM       +VVTYN L+  L K    Q A RL  QMK  G+ 
Sbjct: 388 HWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVE 447

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ++Y   IDG       D+A  LF  +K+ G       Y +LIRA  +AG++++ + L
Sbjct: 448 PDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507

Query: 408 VRE 410
             E
Sbjct: 508 KHE 510



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 32/355 (9%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS 87
           A  LF    R+G Q +  + +I+L  L S   +    AA+ L  K+     +  S+T   
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCS---AGRVGAARKLFHKMTGDGCSPDSYT--- 242

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
                                Y ++++   KS   ++A   F +M+D GV      +NSL
Sbjct: 243 ---------------------YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 148 LIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           L  + K+ + D+ W    E +R     D +SF  ++    +A   + A EV  ++ E G 
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P+++ Y  LID   + GD  +A+ +  ++ E G +    TY  LI  L  +G   + F 
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             E+M+  G  P + TYN L+      G+     +LF +M+ + V  + ++Y   I GL 
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
            + R+ EA  L   MK  G   +   Y  LI     AG+T+    L  QLK   Q
Sbjct: 462 FDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE----LEAQLKHESQ 512



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 5/211 (2%)

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G  D  ET     L  ++ + G+     T   LI A+ +   S  A DL  + E    +P
Sbjct: 9   GILDPLET-----LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSP 63

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +   +T LID  V S + E+A  +Y  + + G   D + Y VLI      G +  A ++F
Sbjct: 64  TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M     EP++  Y  ++    K G    A      M E+GL PNI +Y+  +    + 
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+   A  L  +M + G +PSV  YNIL  A
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDA 214


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 227/430 (52%), Gaps = 3/430 (0%)

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGD 190
           +D+ + P   T+N+L+  + K     +   +     N+  +  D +++  +I G C+   
Sbjct: 176 MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP-DDFTYNTIIDGYCKRDM 234

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L +A E+L      GF P+ V Y SLI+G C  GD+ERA  LF +     L      Y  
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNS 294

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ GL + GL     +   +M  +G  P ++TYN +I+  C  G +S+   + ++   + 
Sbjct: 295 LVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG 354

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +V T+NT+I G CK +++  A +L+++M M GI+P+ ITYN +++G C AG+  +  
Sbjct: 355 YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVN 414

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
             F ++   G  P+ +TYN+LI  F K    + AS ++  M + G+ P  +++  LI  F
Sbjct: 415 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGF 474

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R+ D++ A+ ++  + + G+S    T+ +LI     K NM+ A K+F  M     +P+ 
Sbjct: 475 CRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDL 534

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             Y +++ G CK  N  RA   L EM  KG VP++A++   +  L  + +  EA  +++ 
Sbjct: 535 YTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHI 594

Query: 551 MLKLGLKPSV 560
           M+++G+ P V
Sbjct: 595 MVRMGVVPEV 604



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 236/505 (46%), Gaps = 40/505 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN------------SLLIFVIKS-- 154
           Y +I+DA + +   DQA   + +ML +GV P + T               + + +++S  
Sbjct: 13  YNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLP 72

Query: 155 -----------CS-----------FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
                      C+           +D   LF    R  V  DV +F  ++   C+ GD+ 
Sbjct: 73  ERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIM 132

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           ++  +L ++ + G S N       I G C+ G +E A  L   + +  +     TY  L+
Sbjct: 133 ESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLM 191

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K+   ++  ++  +M   G  P  +TYN +I  YC    + E  +L  +   +   
Sbjct: 192 RGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFV 251

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTY +LI GLC E  V+ A  L ++ +   + P+++ YN L+ G C  G    A ++
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N++  +G  P + TYN++I    K GN   A+ ++ +   +G  P   T+  +ID + +
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ A ++   M   G +PD  TY  +++GLC  G  KE ++ F  M      PN + 
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I  +CK      A  ++  M++ GLVP+  S+++ I   C++G    A +L  ++ 
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491

Query: 553 KLGLKPSVSLYNIL---YRAKNNIE 574
           + G   +   +NIL   Y +K N++
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQ 516



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 1/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID + K  +  +A       +  G  P   T+ SL+  +      ++    F+E +
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+  +  L+KG C  G +  A +V+N++ E G  P++  Y  +I+G CK G+I 
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++       G +    T+  +I G  K        +  E+M + G++P   TYN ++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK  E  + F+EM  +    N +TYN LI   CK  +++EA  ++ +M   G+ 
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ I++N LI GFC  G+ D A+ LF +L   G S +  T+N+LI A+S   N +MA  +
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G  P   TY +L+D   ++ ++++A+   + M   GF P + T+G +++ L M
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581

Query: 468 KGNMKEASKLFNSMWETKLEPNDV 491
              + EA  + + M    + P  V
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 1/366 (0%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           ++  G  P    Y +++D        ++A  ++ ++   G+     T+TV I      G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                     +   G       Y  ++      G   +   LFDEM  R+V  +V T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++  LC++  + E+  LL ++   G+S N  T N  I G C+ G  ++A  L   + +  
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            +P VVTYN L+R   K    + A+  +R M  +G  P + TY  +ID + + D +++A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E+       GF PD  TY  LI+GLC +G+++ A +LFN      L+P+ VVYN ++ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C++G    AL+++ EM E G  P+I +Y+  I  LC+ G   +A V++N  +  G  P V
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 561 SLYNIL 566
             +N +
Sbjct: 360 FTFNTM 365



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 169/362 (46%), Gaps = 12/362 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S++    +  L   AL   ++M++ G  P   T+N ++  + K  +     +  ++ 
Sbjct: 291 VYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  L DV++F  +I G C+   L+ A +++ ++   G +P+ + Y S+++G CK G  
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKA 410

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +     F ++   G      TY +LI    K    ++      +M  +G+ P   ++N L
Sbjct: 411 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL 470

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +C  G +   + LF ++  +  +    T+N LI     ++ +Q AE++  +M   G 
Sbjct: 471 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 530

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ TY  L+DG C A   D+A+    ++ S G  PS+ T+  ++ + +       A  
Sbjct: 531 KPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVA 590

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE---MYSLMQKSGFSPDVYTYGVLIH 463
           ++  M   G+ P       ++D+ + +D  E A     +  LM+K   S    TY VL  
Sbjct: 591 IIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEELMKKGHIS--YPTYEVLHE 642

Query: 464 GL 465
           G+
Sbjct: 643 GV 644



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 79/159 (49%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+  G  P+   Y  ++D+ V +   ++A ++Y  M  +G +PD  T+ V I   C+ G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
              A +L  S+ E   +   + Y  ++ G    G+ Y A  L  EM  + + P++A++++
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  LCQ G   E+  LL ++LK G+  +    NI  R 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG 159


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 230/454 (50%), Gaps = 21/454 (4%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           S+ +    LC L+ L   +++P     L   ++ A   +R    +L ++ Q+    V   
Sbjct: 29  SALSADRALCPLSVLPHLAASP----SLPHLLLTASAAARPHATSLRFYAQLKSLSVPIP 84

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
             + + LL  +  + +F    LF    R ++ L   +F I+++  C  G   +A E+L Q
Sbjct: 85  VASLHPLLSSLPSAPAF---ALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQ 141

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT-QHTYTVLICGLFKNG 259
           +      PN V Y ++I G C  G ++ A  + R++ E G +A  ++TY  LI G  K G
Sbjct: 142 MPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 260 LQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
             +D  + +++M   G V+PS   YN LI  YC+ GK+    +  ++M  R VA  V TY
Sbjct: 198 RMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATY 257

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  L  + R  +A  +L++M+  G+SP+V TYN LI+G+C  G   KA  +F ++  
Sbjct: 258 NLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSR 317

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   + VTY  LI AFS+ G  +    L +   ++GI P  V Y  LI+S     DME+
Sbjct: 318 KGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMER 377

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AFE+ + M+K    PD  TY  LI G C+ G + EA  L + M +  ++P+         
Sbjct: 378 AFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD--------L 429

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           G CK G    A  L+ EM  KG+ P+ ++Y S I
Sbjct: 430 GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 49/369 (13%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF  I  L L     T+ +++  L   G      E   +M      P+  TYN +I  +C
Sbjct: 103 LFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFC 158

Query: 292 NEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPN 349
             G+V    ++  EMR R  +A +  TY TLI G CK  R+++A ++ D+M   G ++P+
Sbjct: 159 ARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPS 218

Query: 350 VITYNKLIDGFCDAGETD-----------------------------------KAFRLFN 374
            + YN LI G+CD G+ D                                    A+ +  
Sbjct: 219 AVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLE 278

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++ NG SP V TYN+LI  + K GN K A ++  EM  +G+  + VTYT LI +F R  
Sbjct: 279 EMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKG 338

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++   ++ +  K G  PDV  Y  LI+  C  G+M+ A ++   M + ++ P+DV YN
Sbjct: 339 QVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYN 398

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G+C  G    A  L+ EM ++G+ P++         LC++G+  +AE L+ +M+  
Sbjct: 399 TLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQGDDAENLMKEMVGK 450

Query: 555 GLKPSVSLY 563
           G+ P  S Y
Sbjct: 451 GITPDDSTY 459



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 30/341 (8%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCCEA 188
           ++L    RP + T+N+++                 E R +  +  D Y++  LI G C+ 
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196

Query: 189 GDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           G +  A +V +++   G  +P+ V+Y +LI G C  G ++ A      + + G+  T  T
Sbjct: 197 GRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVAT 256

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y +L+  LF +G   D +   E+MQ NG+SP ++TYN LI+ YC EG   +  ++F+EM 
Sbjct: 257 YNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V    VTY +LI    ++ +VQE +RL       GI P+V+ YN LI+  C  G+ +
Sbjct: 317 RKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDME 376

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFS---------------------------KAGN 400
           +AF +  +++     P  VTYN LIR F                            K G 
Sbjct: 377 RAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKNGQ 436

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              A +L++EM  +GITP + TY  LI+     D+   A +
Sbjct: 437 GDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAAD 477



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 31/287 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I    K    + A   F +ML  G V P +  +N+L+         D   L + E+
Sbjct: 186 YATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA-LQYRED 244

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             +  V + V ++ +L+      G  + A+ VL +++  G SP+V  Y  LI+G CK G+
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++A  +F ++   G+ AT  TYT LI    + G  ++    ++     G+ P +  YN 
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI----------------------- 322
           LI+ +C  G +   F++  EM  + +  + VTYNTLI                       
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424

Query: 323 ----CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
                GLCK  +  +AE L+ +M   GI+P+  TY  LI+G     E
Sbjct: 425 IQPDLGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDE 471



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 6/220 (2%)

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T+N ++   C  G+  +A  L  Q+      P+ VTYN +I  F   G  + A +++REM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 412 EERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG-FSPDVYTYGVLIHGLCMKG 469
            ERG I P + TY  LI  + +   ME A +++  M   G  +P    Y  LI G C +G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A +    M +  +      YN+++     +G +  A  +L EM   GL P++ +Y+
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             I   C++G   +A  +  +M + G++ +   Y  L  A
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYA 333


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 205/384 (53%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G+L+K  +++++L+  G  P+  IY ++I   CKNG++  A+ L R + + G+    
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT +I G  K G      + +++M+   + P + TY  +IH  C  GK+ E  ++F+E
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  + +  + VTY  LI G CK   ++EA  + +QM   G++PNV+TY  L DG C  GE
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A  L +++   G  P+V TYN ++    K GN +    L+ EM+  G  P  +TYT 
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+D++ +  +M KA E+  +M      P + T+ VL++G CM G +++  +L   M E  
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + PN   +N ++  YC + N      +   M+++G++P+  +Y+  I   C+     EA 
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M++ G   + + Y+ L R 
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRG 671



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 280/554 (50%), Gaps = 25/554 (4%)

Query: 28  AFSLFNWA---SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISG---RITSS 81
             +LFNWA   S+Q    T +S+ I++ L    ++S+    A+ L+ +  +     ++ S
Sbjct: 96  VLNLFNWAKSQSQQQFHPTLESLCIVVHL---SVASNDIQTAKRLVFEFCAKPKIDVSKS 152

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
                 +L +  + +   S+P+     ++ +++      L  Q LF  H++L  GV    
Sbjct: 153 FHLFTEMLIYTYKDW--GSHPLVFDLYFQVLVENGFV--LEAQKLF--HKLLRYGVVVSV 206

Query: 142 NTFNSLLIFVIKSCSFD------KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           ++ N  L  +  SC+F+      K +  F E    V  +  S  I++   C+ G + +A 
Sbjct: 207 DSCNLFLSRL--SCNFEGIKIAVKVFEEFPE--LGVCWNTVSCNIVLHCLCQLGKVREAH 262

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            +L Q+ + G  P+VV Y  ++ G C+ G++++   L  ++   GL   ++ Y  +I  L
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            KNG   +  +    M+  GV P    Y  +I  +C  G VS   KLFDEMR +++  ++
Sbjct: 323 CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDI 382

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY ++I G+CK  ++ EA  + ++M + G+ P+ +TY  LIDG+C AGE  +AF + NQ
Sbjct: 383 VTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQ 442

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G +P+VVTY  L     K G   +A++L+ EM  +G+ P+  TY  +++   +  +
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+  ++   M  +GF PD  TY  L+   C  G M +A +L   M   +L+P  V +N+
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+C  G      RL+  M EKG++PN  +++S +   C          +   M   G
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622

Query: 556 LKPSVSLYNILYRA 569
           + P  + YNIL + 
Sbjct: 623 VMPDSNTYNILIKG 636



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 224/437 (51%), Gaps = 1/437 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           QM D G  P   ++  ++    +    DK      E + K ++ D Y +  +I   C+ G
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           ++ +A ++L  + + G  P+ V+YT++I G CK G++  A  LF ++    +V    TYT
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYT 386

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K+G   +  E + +M + G+ P   TY  LI  YC  G++ E F + ++M  +
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  NVVTY  L  GLCK   +  A  LL +M   G+ PNV TYN +++G C  G  ++ 
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +L  ++   G  P  +TY  L+ A+ K G    A +L+R M  + + P+ VT+ +L++ 
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F  S  +E    +   M + G  P+  T+  L+   C+K NM+  ++++ +M +  + P+
Sbjct: 567 FCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPD 626

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN++I G+CK  N   A  L  EM EKG     A+Y + I    +  K+ EA  L  
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFE 686

Query: 550 QMLKLGLKPSVSLYNIL 566
           +M K GL     +Y+I 
Sbjct: 687 EMRKHGLVAEKDIYDIF 703



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 213/420 (50%), Gaps = 1/420 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGIL 181
           D+ L    ++   G++P    +N++++ + K+    +   L     +  V  D   +  +
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G+++ A ++ +++      P++V YTS+I G CK+G +  A+ +F ++   GL
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              + TYT LI G  K G  K+ F  + +M   G++P++ TY  L    C  G++    +
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM  + +  NV TYNT++ GLCK   +++  +L+++M +AG  P+ ITY  L+D +C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             GE  KA  L   + +    P++VT+NVL+  F  +G  +    L+  M E+GI P+  
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T+  L+  +   ++M    E+Y  M   G  PD  TY +LI G C   NMKEA  L   M
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            E         Y+ +I G+ K      A +L  EM + GLV     Y   + V  ++G W
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 183/354 (51%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           LF    R K+  D+ ++  +I G C++G + +A E+ N++   G  P+ V YT+LIDG C
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G+++ A  +  ++ + GL     TYT L  GL KNG      E   +M   G+ P++Y
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN +++  C  G + +  KL +EM       + +TY TL+   CK   + +A  LL  M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               + P ++T+N L++GFC +G  +   RL   +   G  P+  T+N L++ +    N 
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           +  +++ + M +RG+ P   TY ILI    ++ +M++A+ ++  M + G+S    TY  L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           I G   +    EA KLF  M +  L     +Y++ +    +EGN    L L  E
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 36/316 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD-KGWLFFSEN 167
           Y ++ID + K+    +A    +QM+  G+ P   T+ +L   + K+   D    L    +
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ +VY++  ++ G C+ G++ +  +++ +++  GF P+ + YT+L+D  CK G++ 
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG----------------------- 264
           +A  L R +    L  T  T+ VL+ G   +G+ +DG                       
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599

Query: 265 ------------FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                        E Y+ M   GV P   TYN LI  +C    + E + L  EM  +  +
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
               TY+ LI G  K  +  EA +L ++M+  G+      Y+  +D   + G  +    L
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719

Query: 373 FNQLKSNGQSPSVVTY 388
            ++  +       V Y
Sbjct: 720 CDEFMTELSGTIFVVY 735


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 223/479 (46%), Gaps = 36/479 (7%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           +A+  F +M      P   ++N+++  +++   F++   ++      KVE DVY++ I I
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           K  C  G    A  +L  +  +G   N V Y +++ G  + GD +RA+ LF ++ E  L 
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               T+  L+  L K G   +    ++K+   GV P+L+T+N  I   C EG +    +L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID---- 358
              +    +  +VVTYNT+ICGLC++ RV EAE  L +M   G  PN  TYN +ID    
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 359 -------------------------------GFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                                          GFC  G+ D+A  +F      G  PS++ 
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN LI+   + G    A  L+ EM E+G  P   TY ++I+   +   +  A  +     
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  PD++TY  L+ G C +  +  A +L N MW   + P+ + YN ++ G CK   S 
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + +   M EKG  PNI +Y++ I  LC   K  EA  LL +M   GL P V  +  L
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 227/478 (47%), Gaps = 39/478 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCE 187
           F ++L  GV P   TFN  +  + K  S D+   L    +R  +  DV ++  +I G C 
Sbjct: 318 FDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCR 377

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              + +A E L+++   GF PN   Y S+IDG CK G +  A  + +     G    + T
Sbjct: 378 KSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT 437

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ G  ++G        ++     G+ PS+  YN LI   C +G +    +L +EM 
Sbjct: 438 YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +    ++ TYN +I GLCK   + +A  L+      G  P++ TYN L+DG+C   + D
Sbjct: 498 EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLD 557

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  L N++ S G +P V+TYN L+    K   S+   ++ + M E+G  P+ +TY  +I
Sbjct: 558 SAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 617

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG------------------ 469
           +S   S  + +A ++   M+  G +PDV ++G LI G C  G                  
Sbjct: 618 ESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDV 677

Query: 470 ------------------NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
                             NMK A +LF+ M +   +P++  Y ++I G+CK GN  +  +
Sbjct: 678 SHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYK 737

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L E  EKG +P++ ++   +  LC + K  EA  +++ M++  + P     N ++ A
Sbjct: 738 FLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT--VNTIFEA 793



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 232/490 (47%), Gaps = 33/490 (6%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A  L    SR+GL+    + + ++  L  K        A+  + K+++G    + FT  
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV---VEAEECLHKMVNGGFEPNDFT-- 402

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
                                 Y SIID + K  +   A       +  G +P   T+ S
Sbjct: 403 ----------------------YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440

Query: 147 LLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           L+    +    D+    F +   K +   +  +  LIKG C+ G +  A +++N++ E G
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
             P++  Y  +I+G CK G +  A  L       G +    TY  L+ G  +        
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E   +M   G++P + TYN L++  C   K  E  ++F  M  +  A N++TYNT+I  L
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPS 384
           C   +V EA  LL +MK  G++P+V+++  LI GFC  G+ D A+ LF  + K    S +
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
             TYN++I AFS+  N KMA  L  EM++ G  P   TY +LID F ++ ++ + ++   
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
              + GF P + T+G +++ LC++  ++EA  + + M +  + P+ V     IF   K+G
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV---NTIFEADKKG 797

Query: 505 N-SYRALRLL 513
           + +Y A   L
Sbjct: 798 HITYHAYEFL 807



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 182/378 (48%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G + +A +   +++     P+V  Y ++++   + G   +A  ++ ++ +  + +  +TY
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T+ I    + G           M + G   +   Y  ++  +   G      +LFDEM  
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  +V T+N L+  LCK+  V E+ERL D++   G+ PN+ T+N  I G C  G  D+
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RL   +   G  P VVTYN +I    +      A + + +M   G  P++ TY  +ID
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + +   +  A  +       GF PD +TY  L++G C  G+  +A  +F       L P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + +VYN +I G C++G    AL+L+ EM EKG  P+I +Y+  I  LC+ G   +A  L+
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528

Query: 549 NQMLKLGLKPSVSLYNIL 566
              +  G  P +  YN L
Sbjct: 529 GDAITKGCIPDIFTYNTL 546



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 221/467 (47%), Gaps = 14/467 (2%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K+R+ E +  + LK++ S     +  ++++S +R +S+  N++LI        D G +  
Sbjct: 25  KTRMMEKV-QSMLKAKESGNDEVWRARLMESELRTKSSFKNAILI---AGEDDDLGEVKM 80

Query: 165 SENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              R   +L DV+        C +  D+      L +  + GF   +  Y S++     +
Sbjct: 81  EGRRTDRDLVDVF--------CMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFH 132

Query: 224 GDIERAKMLFRKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           G     + L  ++   L     +  Y   +    + G  ++  + +E+M L    PS+Y+
Sbjct: 133 GKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYS 192

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN +++     G  ++  K++  M+ ++V  +V TY   I   C+  R   A RLL  M 
Sbjct: 193 YNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMP 252

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           + G   N + Y  ++ GF + G+ D+A  LF+++      P V T+N L+ A  K G   
Sbjct: 253 VLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVL 312

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            +  L  ++ +RG+ P+  T+ I I    +   +++A  +   + + G  PDV TY  +I
Sbjct: 313 ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVI 372

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            GLC K  + EA +  + M     EPND  YN +I GYCK+G    A R+L +   KG  
Sbjct: 373 CGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFK 432

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+  +Y S +   CQDG   +A  +    L  GL+PS+ +YN L + 
Sbjct: 433 PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 166/345 (48%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G I+ A   F ++       + ++Y  ++  L + G      + Y +M+   V   +Y
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY   I  +C  G+     +L   M       N V Y T++ G  +      A  L D+M
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               + P+V T+NKL+   C  G   ++ RLF+++   G  P++ T+N+ I+   K G+ 
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+  +   G+ P  VTY  +I    R   + +A E    M   GF P+ +TY  +
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G C KG + +A+++         +P++  Y  ++ G+C++G+  +A+ +  +   KGL
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P+I  Y++ I  LCQ G    A  L+N+M + G KP +  YN++
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 234/496 (47%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+++ D+A   F  M+D GVRP ++T+  L+   +    + +      E  
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D Y + +L+   C+ G   +A  + + +   G  PNV IY  L+ G    G + 
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLS 324

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                   +   G+    H + ++ C   K  +  +    ++KM+   +SP++ TY  LI
Sbjct: 325 EMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALI 384

Query: 288 HEYCNEGKVSEGF-----------------------------------KLFDEMRHREVA 312
              C  G+V +                                     +LF E+  + + 
Sbjct: 385 DALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIR 444

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + V +NTL+C LC+E RV EA+RL+D M   G+ P+VI+YN L+DG C  G  D+A +L
Sbjct: 445 LDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKL 504

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P  VTYN L+  + KA     A  L REM  +G+TP  VTY  ++    +
Sbjct: 505 LDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 564

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  S    ++YTY ++I+GLC    + EA K+F+S+    L+ +   
Sbjct: 565 TGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFT 624

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N+MI    K G    A+ L   ++  GLVP++ +Y      L ++G   E + L + M 
Sbjct: 625 ANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAME 684

Query: 553 KLGLKPSVSLYNILYR 568
           + G  P+  + N L R
Sbjct: 685 ENGTAPNSRMLNALVR 700



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 214/439 (48%), Gaps = 40/439 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG---FSPNVVIYTSLIDGCCKNGDIERAK 230
           DV+S+ IL+KG C      +A E+L+ + + G    +PNVV YT++IDG CK   ++RAK
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F+ + + G+    HTYT LI G    G  K+  +  ++M  +G+ P  Y Y  L+   
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTY-------------------------------- 318
           C  G+ +E   +FD +  + +  NV  Y                                
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342

Query: 319 ---NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
              N + C   K+  + EA  + D+M+   +SPN++TY  LID  C  G  D A   FNQ
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G +P +  ++ L+         + A +L  E+ ++GI    V +  L+ +  R   
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A  +  LM + G  PDV +Y  L+ G C+ G + EA+KL + +    L+P+ V YN 
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ GYCK      A  L  EM  KGL P++ +Y++ +  L Q G++ EA+ L   M+   
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582

Query: 556 LKPSVSLYNILYRA--KNN 572
            + ++  YNI+     KNN
Sbjct: 583 TQMNIYTYNIIINGLCKNN 601



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 201/408 (49%), Gaps = 1/408 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCC 186
           +   M+ +GV P  + FN +     K    D+    F + R  ++  ++ ++G LI   C
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G ++ A    NQ+ + G +P++ +++SL+ G C     E+A+ LF ++ + G+     
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTV 448

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +  L+C L + G   +     + M   GV P + +YN L+  +C  G++ E  KL D +
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVI 508

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  + VTYNTL+ G CK  R+ +A  L  +M M G++P+V+TYN ++ G    G  
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  L+  + ++    ++ TYN++I    K      A  +   +  + +     T  I+
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I + ++    E A ++++ +   G  PDV TY ++   L  +G+++E  +LF++M E   
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            PN  + N ++      G+  RA   L +++EK      ++ S  I +
Sbjct: 689 APNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISI 736



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 207/445 (46%), Gaps = 1/445 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  ++D   K+    +A   F  ++  G++P    +  LL       S  +   F    
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V  D + F I+     +   +++A  + +++ +   SPN+V Y +LID  CK G +
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A + F ++ + G+      ++ L+ GL      +   E + ++   G+      +N L
Sbjct: 394 DDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C EG+V E  +L D M    V  +V++YNTL+ G C   R+ EA +LLD +   G+
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TYN L+ G+C A   D A+ LF ++   G +P VVTYN ++    + G    A +
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M       +  TY I+I+   +++ +++AF+M+  +       D++T  ++I  L 
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G  ++A  LF ++    L P+   Y ++     KEG+      L   M E G  PN  
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQM 551
             ++ +  L   G    A   L+++
Sbjct: 694 MLNALVRWLLHRGDINRAGAYLSKL 718



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 202/465 (43%), Gaps = 49/465 (10%)

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKS-CSFDKGWLFFSENR---- 168
           AH  S   + AL  F +ML +  RP S   FN LL  V ++ CS     +    NR    
Sbjct: 25  AHSGSLGLNDALKLFDEML-THARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRE 83

Query: 169 --CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN-VVIYTSLIDGCCKNGD 225
              KV    +++ ILI   C  G L   F     + + G+  N  VI++ L+ G C    
Sbjct: 84  CSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKR 143

Query: 226 IERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           ++ A  +L R++ E G                                    +P +++Y+
Sbjct: 144 VDEATDILLRRMPEFG-----------------------------------CTPDVFSYS 168

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVAC---NVVTYNTLICGLCKEMRVQEAERLLDQM 341
            L+  +CNE +  E  +L   M          NVVTY T+I GLCK   V  A+ +   M
Sbjct: 169 ILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHM 228

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ PN  TY  LI G+   G+  +  ++  ++ ++G  P    Y VL+    K G  
Sbjct: 229 IDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRC 288

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A ++   +  +GI P+   Y IL+  +     + +      LM  +G SPD + + ++
Sbjct: 289 TEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIM 348

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
                 K  + EA  +F+ M + +L PN V Y  +I   CK G    A+    +M ++G+
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P+I  +SS +  LC   KW +AE L  ++L  G++     +N L
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 188/409 (45%), Gaps = 48/409 (11%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++IDA  K    D A+  F+QM+D G+ P    F+SL   V   C+ D
Sbjct: 374 SPNIVT----YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSL---VYGLCTVD 426

Query: 159 KGW-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           K W     LFF      + LD   F  L+   C  G + +A  +++ +  +G  P+V+ Y
Sbjct: 427 K-WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISY 485

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            +L+DG C  G I+ A  L   I  +GL                                
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVIVSIGL-------------------------------- 513

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
               P   TYN L+H YC   ++ + + LF EM  + +  +VVTYNT++ GL +  R  E
Sbjct: 514 ---KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A+ L   M  +    N+ TYN +I+G C     D+AF++F+ L S      + T N++I 
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  K G  + A DL   +   G+ P   TY ++ ++ ++   +E+  E++S M+++G +P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +      L+  L  +G++  A    + + E          +M+I  Y +
Sbjct: 691 NSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 216/438 (49%), Gaps = 2/438 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
            ++A+     M + G+ P S T N +L   ++    +     F E   + V  D  S+ ++
Sbjct: 765  NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 824

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            + GC   G + +A   L  + + GF P+    T ++   C+NG + RA   FRK+ +LG 
Sbjct: 825  VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 884

Query: 242  VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                  +T LI GL K G  K  FE  E+M  NG  P++YT+  LI   C  G   + F+
Sbjct: 885  KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944

Query: 302  LFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LF ++ R      NV TY ++I G CKE ++  AE L  +MK  G+ PNV TY  LI+G 
Sbjct: 945  LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 1004

Query: 361  CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            C AG   +A+ L N +   G  P++ TYN  I +  K   +  A +L+ +    G+    
Sbjct: 1005 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 1064

Query: 421  VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            VTYTILI    + +D+ +A   +  M K+GF  D+    +LI   C +  MKE+ +LF  
Sbjct: 1065 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 1124

Query: 481  MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            +    L P    Y  MI  YCKEG+   AL+    M   G VP+  +Y S I  LC+   
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 1184

Query: 541  WPEAEVLLNQMLKLGLKP 558
              EA  L   M+  GL P
Sbjct: 1185 VDEACKLYEAMIDRGLSP 1202



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 38/443 (8%)

Query: 112  IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
            I+ A  ++ L ++A++YF +M+D G +P                                
Sbjct: 859  ILTALCENGLVNRAIWYFRKMIDLGFKP-------------------------------- 886

Query: 172  ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
              ++ +F  LI G C+ G + +AFE+L ++   G+ PNV  +T+LIDG CK G  E+A  
Sbjct: 887  --NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944

Query: 232  LFRKIGELGLVATQ-HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF K+          HTYT +I G  K          + +M+  G+ P++ TY  LI+ +
Sbjct: 945  LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 1004

Query: 291  CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
            C  G     ++L + M       N+ TYN  I  LCK+ R  EA  LL++    G+  + 
Sbjct: 1005 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 1064

Query: 351  ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            +TY  LI   C   + ++A   F ++   G    +   N+LI AF +    K +  L + 
Sbjct: 1065 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 1124

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            +   G+ P++ TYT +I  + +  D++ A + +  M++ G  PD +TYG LI GLC K  
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 1184

Query: 471  MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
            + EA KL+ +M +  L P +V    + + YCK  +S  A+ LL  +++K  +  +    +
Sbjct: 1185 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTV---RT 1241

Query: 531  TIGVLCQDGKWPEAEVLLNQMLK 553
             +  LC + K   A +   ++L+
Sbjct: 1242 LVRKLCSEKKVGVAALFFQKLLE 1264



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 1/384 (0%)

Query: 181  LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            +++   E G LN+A  ++  ++  G +P+ +    +++   + G IE A+ +F ++   G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 241  LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
            +V    +Y +++ G F++G  ++   +   M   G  P   T   ++   C  G V+   
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 301  KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
              F +M       N++ + +LI GLCK+  +++A  +L++M   G  PNV T+  LIDG 
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 361  CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G T+KAFRLF +L +S+   P+V TY  +I  + K      A  L   M+E+G+ P+
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 420  EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              TYT LI+   ++    +A+E+ +LM   GF P++YTY   I  LC K    EA +L N
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 480  SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
              +   LE + V Y ++I   CK+ +  +AL     MN+ G   ++   +  I   C+  
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 540  KWPEAEVLLNQMLKLGLKPSVSLY 563
            K  E+E L   ++ LGL P+   Y
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETY 1137



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 36/335 (10%)

Query: 271  MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
            MQ  G++PS  T NC++      G +     +FDEM  R V  +  +Y  ++ G  ++ +
Sbjct: 774  MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833

Query: 331  VQEAERLLDQM---------------------------------KMA--GISPNVITYNK 355
            +QEA+R L  M                                 KM   G  PN+I +  
Sbjct: 834  IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893

Query: 356  LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL-VREMEER 414
            LIDG C  G   +AF +  ++  NG  P+V T+  LI    K G ++ A  L ++ +   
Sbjct: 894  LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953

Query: 415  GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               P+  TYT +I  + + D + +A  ++S M++ G  P+V TY  LI+G C  G+   A
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 475  SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             +L N M +    PN   YN  I   CK+  +  A  LL +    GL  +  +Y+  I  
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 535  LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+     +A     +M K G +  + L NIL  A
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 1108



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 5/309 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
            Y ++I+ H K+    +A    + M D G  P   T+N+ +  + K     + +   ++  
Sbjct: 997  YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 1056

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             C +E D  ++ ILI+  C+  D+N+A     ++ + GF  ++ +   LI   C+   ++
Sbjct: 1057 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 1116

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             ++ LF+ +  LGL+ T+ TYT +I    K G      +++  M+ +G  P  +TY  LI
Sbjct: 1117 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 1176

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               C +  V E  KL++ M  R ++   VT  TL    CK      A  LL+ +      
Sbjct: 1177 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW- 1235

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
              + T   L+   C   +   A   F +L     S   VT      A S++G + + +DL
Sbjct: 1236 --IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDL 1293

Query: 408  VREMEERGI 416
               +  RG+
Sbjct: 1294 TERI-SRGV 1301



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 91/176 (51%)

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++R FS+ G    A  +V +M+ +G+TPS +T   +++  V    +E A  ++  M   G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  +Y +++ G    G ++EA +    M +    P++    +++   C+ G   RA+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +M + G  PN+ +++S I  LC+ G   +A  +L +M++ G KP+V  +  L
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 929


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 205/398 (51%), Gaps = 2/398 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI+G C  G + +A ++ +++   GF P+V+ Y +LI+G CK G+   A    R +
Sbjct: 126 TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +     T   Y+ +I  L K+    +    +  M   G+SP+ +TY+ LIH  C  G  
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  +LF  M HR++  + +T+NTL+  LCKE  V +A  ++D M  + + P+V+TYN L
Sbjct: 246 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG C   E  K   +F+ +   G  PSV++Y  LI  + K      A  L  EM ++G+
Sbjct: 306 MDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTY  LI        +  A  ++  M   G  PD+ TY +L   LC    + EA  
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   +  T L+P+  +Y++++ G C+ G    A  L  +++ KGL P++ +Y+  I  LC
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
           Q G   EA  L  +M + G  P+   YN++ R   +NN
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNN 523



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 210/437 (48%), Gaps = 1/437 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
            +L  G +P + TF +L+  +       +    F +   +  + DV ++G LI G C+ G
Sbjct: 114 DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVG 173

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           + + A   L  +E+    P VV+Y+++ID  CK+  +  A  LF  +   G+     TY+
Sbjct: 174 NTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYS 233

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI GL   G  K+    +  M    + P   T+N L+   C EG V +   + D M   
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++  +VVTYN+L+ G C    + +   + D M   G  P+VI+Y  LI+G+C     DKA
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++   G  P  VTYN LI      G  + A  L  EM   G  P  VTY IL D 
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  + +A  +  +++ +   PD++ Y +++ G+C  G ++ A  LF+ +    L P+
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y +MI G C++G    A +L GEM+E G  PN  +Y+       ++ +   A  L  
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQ 533

Query: 550 QMLKLGLKPSVSLYNIL 566
           +ML  G    VS   +L
Sbjct: 534 EMLSRGFSIDVSTTTLL 550



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 250/528 (47%), Gaps = 23/528 (4%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS 87
           A SLFN   R      P SI    +LL S      ++   +L  ++ S  I  +++T   
Sbjct: 38  ALSLFNRMLRM---RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 88  LL---CHLTQLFPSSS----------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           L+   CHL +L  + S           P T +  + ++I          +AL  F +M  
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTAT--FTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDL 191
            G +P   T+ +L+  + K  +      F     +  C+  + VYS   +I   C+   L
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYS--TIIDSLCKDRQL 210

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            +A  + + +   G SPN   Y+SLI G C  G  + A  LF  +    ++  Q T+  L
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +  L K G+        + M  + + P + TYN L+  +C   ++ +   +FD M  +  
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +V++Y TLI G CK   + +A  L ++M   G+ P+ +TYN LI G C  G    A  
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF+++   GQ P +VTY +L     K      A  L++ +E   + P    Y+I++D   
Sbjct: 391 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 450

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R+ ++E A +++S +   G  PDV TY ++I+GLC +G + EASKLF  M E    PN  
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNAC 510

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            YN++  G+ +   + RA++L  EM  +G   ++++ +  + +L  DG
Sbjct: 511 TYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 194/387 (50%), Gaps = 8/387 (2%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A  + N++  M   P++V ++ L+    +         L++++   G+    +T  +
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 251 LICGLFKNGLQKDGFEFY---EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           LI       L + GF F    + ++L G  PS  T+  LI   C EGK+ E  +LFD+M 
Sbjct: 95  LINSFCH--LNRLGFAFSVLGDILKL-GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 +V+TY TLI GLCK      A R L  M+     P V+ Y+ +ID  C   +  
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF+ + + G SP+  TY+ LI      G+ K A  L   M  R I P ++T+  L+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   + KA  +  +M +S   PDV TY  L+ G C++  M +   +F++M      
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + Y  +I GYCK     +A+ L  EM+++GL+P+  +Y++ I  LC  G+  +A  L
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 548 LNQMLKLGLKPSVSLYNIL--YRAKNN 572
            ++M+  G  P +  Y IL  Y  KN+
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNH 418


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFF 164
           R Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F 
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT-EARKMFD 328

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ LI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +++A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M    +SP    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C   K  +  +L  EM  R +  + + +N++I   CKE RV E+E+L D M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P++ITY+ LIDG+C AG+ D+A +L   + S G  P  VTYN LI  + K    + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L REME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HG
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC      EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 525 IASYS 529
           + +YS
Sbjct: 689 VRTYS 693



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 37/437 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G  + GDL+KA+   +++ + G  PNVV Y+S+I   CK   +++A  + 
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G++    TY  ++ G   +G  K+   F +KM  +GV P + TYN L+   C  
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNT--------------------------------- 320
           G+ +E  K+FD M  R +   + TY T                                 
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 321 --LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LIC   K+ +V +A  +  +M+  G++P+ +TY  +I   C +G  + A R F Q+  
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              SP  + YN LI +         A +L+ EM +RGI    + +  +IDS  +   + +
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           + +++ LM + G  PD+ TY  LI G C+ G M EA+KL  SM    ++P+ V YN +I 
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      AL L  EM   G+ P+I +Y+  +  L Q  +   A+ L   + + G + 
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 559 SVSLYNILYRA--KNNI 573
            +S YNI+     KNN+
Sbjct: 618 ELSTYNIILHGLCKNNL 634



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 242/521 (46%), Gaps = 39/521 (7%)

Query: 91  HLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
            L Q+ P          + Y ++I+   K    D+A   +H+MLD G+ P   T++S++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K+ + DK   +  S  +  V  +  ++  ++ G C +G   +A   L ++   G  P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SL+D  CKNG    A+ +F  + + GL     TY  L+ G    G   +     
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M  NG+ P+ Y ++ LI  Y  +GKV +   +F +MR + +  + VTY T+I  LCK 
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKL-------------------------------- 356
            RV++A R  +QM    +SP  I YN L                                
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 357 ---IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              ID  C  G   ++ +LF+ +   G  P ++TY+ LI  +  AG    A+ L+  M  
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  VTY  LI+ + +   ME A  ++  M+ SG SPD+ TY +++ GL        
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  + E+  +     YN+++ G CK   +  ALR+   +    L     +++  IG
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + G+  EA+ L   +   GL P V  Y+++  A+N IE
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM--AENLIE 701



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 218/435 (50%), Gaps = 38/435 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ +LG +    +Y +L+ GL      ++  E  + M  +G    P + +Y  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +  EG + + +  + EM  R +  NVVTY+++I  LCK   + +A  +L  M   G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN ++ G+C +G+  +A     ++ S+G  P VVTYN L+    K G    A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 407 LVREMEERGITPSEVTY-----------------------------------TILIDSFV 431
           +   M +RG+ P   TY                                   +ILI ++ 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +++A  ++S M++ G +PD  TYG +I  LC  G +++A + F  M + +L P ++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN +I   C      +A  L+ EM ++G+  +   ++S I   C++G+  E+E L + M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 552 LKLGLKPSVSLYNIL 566
           +++G+KP +  Y+ L
Sbjct: 506 VRIGVKPDIITYSTL 520



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           ++  +I A+ K    DQA+  F +M   G+ P + T+ +++  + KS   +    +F   
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            + R      VY+   LI   C     +KA E++ ++ + G   + + + S+ID  CK G
Sbjct: 436 IDERLSPGNIVYNS--LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  ++ LF  +  +G+     TY+ LI G    G   +  +    M   G+ P   TYN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ +   LF EM    V+ +++TYN ++ GL +  R   A+ L   +  +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G    + TYN ++ G C    TD+A R+F  L          T+N++I A  K G +  A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL   +   G+ P   TY+++ ++ +    +E+  +++  M+++G + +      ++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 465 LCMKGNMKEA 474
           L  +G++  A
Sbjct: 734 LLQRGDITRA 743



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 169/367 (46%), Gaps = 11/367 (2%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T +  Y ++I    KS   + A+ YF QM+D  + P +  +NSL+  +   C FDK 
Sbjct: 406 NPDTVT--YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFDK- 459

Query: 161 W-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           W     L        + LD   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG C  G ++ A  L   +  +G+     TY  LI G  K    +D    + +M+ +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           VSP + TYN ++       + +   +L+  +        + TYN ++ GLCK     EA 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+   + +  +     T+N +I      G  D+A  LF  L +NG  P V TY+++    
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  +   DL   MEE G T +      ++   ++  D+ +A     ++ +  FS + 
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759

Query: 456 YTYGVLI 462
            T  + +
Sbjct: 760 STASLFL 766



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET---KLEPNDVVY 493
           E A  ++  + + G    +Y     +  +         S+ +N M      ++ PN   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQML 552
            ++I   C  G        LG + +KG   +  +++  +  LC D +  +A +++L +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 553 KLGLKPSVSLYNILYRA 569
           +LG  P+V  YNIL + 
Sbjct: 155 QLGCIPNVFSYNILLKG 171


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 229/484 (47%), Gaps = 46/484 (9%)

Query: 119 SRLS-DQALFYFHQMLDSGVRPRSN--TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDV 175
           SRL  D+A+  F ++      P  N  ++N LL  +  +         F E       DV
Sbjct: 240 SRLPLDEAIELFQEL------PHKNVCSYNILLKALCDAGRVKDARQLFDE--MASAPDV 291

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI------------------ 217
            ++GILI G C  G+L  A ++L+++   G  PN  +YTS++                  
Sbjct: 292 VTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVED 351

Query: 218 -----------------DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
                             G C  GD+  A+  F ++   GL     TYT +I GL +   
Sbjct: 352 MVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVE 411

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            ++  +  ++M    +     TY  LI  YC  GK++E F++ + M  R V  NVVTY  
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTA 471

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L  GLCK+  VQ A  LL +M   G+  N  TYN LI+G C AG  ++A R    + +  
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P V TY  LI A  K+G+   A  L++EM ++GI P+ VTY +L++ F  S  +E   
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           ++   M +    P+  TY  L+   C++ NMK  ++++  M    + PN+  YN++I G+
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGH 651

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK  N   AL    EM +KG      SYS+ I +L +  K+ EA  L + M K GL    
Sbjct: 652 CKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAES 711

Query: 561 SLYN 564
            +Y+
Sbjct: 712 DVYD 715



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 10/434 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G+ P     N+    V+     D+    F E   K   +V S+ IL+K  C+AG +  A 
Sbjct: 227 GISPSPEACNA----VLSRLPLDEAIELFQELPHK---NVCSYNILLKALCDAGRVKDAR 279

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++    +EM  +P+VV Y  LI G C  G++E A  L  ++   G+      YT ++  L
Sbjct: 280 QLF---DEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALL 336

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
              G   D     E M    V      Y  ++  +CN+G +    + FDEM+ + +A + 
Sbjct: 337 CDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 396

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY T+I GLC+ + ++EAE+LL +M    +  + +TY  LIDG+C  G+  +AF++ N 
Sbjct: 397 VTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNA 456

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G +P+VVTY  L     K G+ + A++L+ EM  +G+  +  TY  LI+   ++  
Sbjct: 457 MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 516

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+A    + M  +   PDVYTY  LI  LC  G++  A  L   M +  ++P  V YN+
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+C  G      +LL  M EK + PN A+Y+S +   C +        +   M    
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636

Query: 556 LKPSVSLYNILYRA 569
           + P+ + YNIL + 
Sbjct: 637 VGPNENTYNILIKG 650


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 217/457 (47%), Gaps = 35/457 (7%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V K+R+   +ID  L     D A   F +MLD  V P                       
Sbjct: 190 VLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVP----------------------- 226

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                      D  S+ +++ G C  G ++     L  + E G++ +    T +I    +
Sbjct: 227 -----------DSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G + RA   F+K  ++GL      ++ LI GL K G  K  FE  E+M   G  P++YT
Sbjct: 276 KGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYT 335

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +  LI   C +G   + F+LF ++ R      NV TY  +I G CKE ++  AE LL +M
Sbjct: 336 HTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRM 395

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K  G+ PN  TY  LIDG C AG   +A+ L + +   G +P++ TYN +I    K G  
Sbjct: 396 KEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRF 455

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+R   + G+   +VTYTILI  F R  D ++A  ++S M K G  PD++TY VL
Sbjct: 456 PEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVL 515

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I   C +  ++E+ KLF       L P    Y  MI GYC++G+   A++   +M + G 
Sbjct: 516 IATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGC 575

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            P+  +Y + I  LC + K  EA  L   M+  GL P
Sbjct: 576 KPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 204/385 (52%), Gaps = 1/385 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++   E G L +A  ++ +++  G      I   +ID     G ++ A+ +F ++ +  
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V    +Y +++ G  + G   D   + + M   G +    T   +I  +  +G V+  F
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
             F +     +  N++ +++LI GLCK   +++A  +L++M   G  PNV T+  LIDG 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 361 CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           C  G T+KAFRLF +L +S+   P+V TY  +I  + K      A  L+  M+E+G+ P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TYT LID   ++ +  +A+E+  LM K GF+P+++TY  +I GLC KG   EA KL  
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
              ++ L  + V Y ++I  +C++ ++ +AL +   M + GL P++ +Y+  I   C+  
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYN 564
           K  E+E L  + + LGL P+   Y 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYT 548



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 153/318 (48%), Gaps = 36/318 (11%)

Query: 285 CLIHEYCNEGKVSE------------------------------GF-----KLFDEMRHR 309
           C++  +   GK+ E                              GF     K+FDEM  R
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +  +Y  ++ G C+  R+ + +R L  M   G + +  T   +I  F + G  ++A
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRA 282

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F  F +    G +P+++ ++ LI    K G+ K A +++ EM  +G  P+  T+T LID 
Sbjct: 283 FWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDG 342

Query: 430 FVRSDDMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             +    EKAF ++  L++   + P+VYTY  +I+G C +  +  A  L   M E  L P
Sbjct: 343 LCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVP 402

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N   Y  +I G+CK GN  RA  L+  M ++G  PNI +Y++ I  LC+ G++PEA  LL
Sbjct: 403 NTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLL 462

Query: 549 NQMLKLGLKPSVSLYNIL 566
            + LK GL      Y IL
Sbjct: 463 RRGLKSGLHADKVTYTIL 480


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 233/461 (50%), Gaps = 1/461 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            L+ ++I+A  K    D A+  F +M   GV P   T+N+++  + KS   D+ + F  +
Sbjct: 257 HLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEK 316

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             + KV   + ++ + I G  +   +++A  VL ++ E+GF PN V+Y +LIDG CK G+
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I  A  +   +   G+     T   LI G  K+          E+M   G+  +  +++ 
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+  C + +         EM  R +  N     TL+ GLCK  +  EA  L  ++   G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PN++T N LI G C AG   +  +L   +   G     +TYN LI    K G  K   
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L  EM ++GI P   T+ +L+     +D +++A  ++   +K+G+ P+VYTYGV+I G 
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGY 616

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    ++E   L N +   KLE N VVYN +I  YC  GN   A RL  +M  +G++ + 
Sbjct: 617 CKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSC 676

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A+YSS +  LC  G   +A+ LL++M K GL P+V  Y  +
Sbjct: 677 ATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 218/466 (46%), Gaps = 36/466 (7%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-- 160
           V    +Y ++ID + K     +AL     ML  G+ P S T NSL+    KS    +   
Sbjct: 358 VPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAEN 417

Query: 161 ----------------------WL-----FFSENRCKVELDVYSF-------GILIKGCC 186
                                 WL     F +      E+ + +          L+ G C
Sbjct: 418 VLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLC 477

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +AG   +A E+  +L   GF PN+V   +LI G CK G+++    L R + E GLV  + 
Sbjct: 478 KAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRI 537

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY  LI G  K G  K+GFE  E+M   G+ P +YT+N L+H  CN  K+ E  +L+ E 
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC 597

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +      NV TY  +I G CK  +V+E E LL+++    +  N + YN LI  +C  G  
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           + AFRL + +KS G   S  TY+ L+      G    A  L+ EM + G+ P+ V YT +
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I  + +   M K   +   M      P+ +TY ++I G C  G  KEA+KL N M E  +
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            P+ V YN    G CKEG    A ++  EM+   +  +  +Y++ I
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 261/558 (46%), Gaps = 42/558 (7%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS--- 80
           P  A + F++ S     + T +S  +++ LL   + +   + A+ L++++I G++ +   
Sbjct: 100 PKTALNFFHFVSETCKFRFTARSYCVLIHLL---VGNDLLSPARLLLIRLIDGKVPAFYA 156

Query: 81  SSFTPRSL-LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
            +F  R   +  +   F     PV   ++ + ++  H+ S       F F   + S +  
Sbjct: 157 RNFESRHFEIAQIMADFNLVFEPVIGVKIADLLV--HVYSTQFKHLGFGFAADVFS-LLA 213

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           +   F SL     K+C+F                       L+    +A +L K++EV +
Sbjct: 214 KKGLFPSL-----KTCTF-----------------------LLSSLVKANELKKSYEVYD 245

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            +   G  P+V +++++I+  CK    + A  LF K+ +LG+     TY  +I GL K+G
Sbjct: 246 FICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSG 305

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              + + F EKM    VSPSL TY+  I+      K+ E   +  EM       N V YN
Sbjct: 306 RLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYN 365

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK   + EA ++ D M   GISPN +T N LI GFC + +  +A  +  ++   
Sbjct: 366 TLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   +  +++++I           A   +REM  R + P++   T L+    ++    +A
Sbjct: 426 GLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEA 485

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            E++  +   GF P++ T   LIHGLC  GNM+E  KL   M E  L  + + YN +I G
Sbjct: 486 VELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISG 545

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            CKEG       L  EM +KG+ P+I +++  +  LC   K  EA  L ++  K G  P+
Sbjct: 546 CCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPN 605

Query: 560 VSLYNIL---YRAKNNIE 574
           V  Y ++   Y   N +E
Sbjct: 606 VYTYGVMIDGYCKANKVE 623


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFF 164
           R Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F 
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT-EARKMFD 328

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ LI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +++A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M    +SP    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C   K  +  +L  EM  R +  + + +N++I   CKE RV E+E+L D M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ PN+ITY+ LIDG+C AG+ D+A +L   + S G  P  VTYN LI  + K    + A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L REME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HG
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC      EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 525 IASYS 529
           + +YS
Sbjct: 689 VRTYS 693



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 243/521 (46%), Gaps = 39/521 (7%)

Query: 91  HLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
            L Q+ P          + Y ++I+   K    D+A   +H+MLD G+ P   T+NS++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIA 242

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K+ + DK   +  S  +  V  +  ++  ++ G C +G   +A   L ++   G  P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SL+D  CKNG    A+ +F  + + GL     TY  L+ G    G   +     
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M  NG+ P+ Y ++ LI  Y  +GKV +   +F +MR + +  + VTY T+I  LCK 
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKL-------------------------------- 356
            RV++A R  +QM    +SP  I YN L                                
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 357 ---IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              ID  C  G   ++ +LF+ +   G  P+++TY+ LI  +  AG    A+ L+  M  
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  VTY  LI+ + +   ME A  ++  M+ SG SPD+ TY +++ GL        
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  + E+  +     YN+++ G CK   +  ALR+   +    L     +++  IG
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + G+  EA+ L   +   GL P V  Y+++  A+N IE
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM--AENLIE 701



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 219/435 (50%), Gaps = 38/435 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ +LG +    +Y +L+ GL      ++  E  + M  +G    P + +Y  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +  EG + + +  + EM  R +  NVVTYN++I  LCK   + +A  +L  M   G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN ++ G+C +G+  +A     ++ S+G  P VVTYN L+    K G    A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 407 LVREMEERGITPSEVTY-----------------------------------TILIDSFV 431
           +   M +RG+ P   TY                                   +ILI ++ 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +++A  ++S M++ G +PD  TYG +I  LC  G +++A + F  M + +L P ++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN +I   C      +A  L+ EM ++G+  +   ++S I   C++G+  E+E L + M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 552 LKLGLKPSVSLYNIL 566
           +++G+KP++  Y+ L
Sbjct: 506 VRIGVKPNIITYSTL 520



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           ++  +I A+ K    DQA+  F +M   G+ P + T+ +++  + KS   +    +F   
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            + R      VY+   LI   C     +KA E++ ++ + G   + + + S+ID  CK G
Sbjct: 436 IDERLSPGNIVYNS--LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  ++ LF  +  +G+     TY+ LI G    G   +  +    M   G+ P   TYN
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ +   LF EM    V+ +++TYN ++ GL +  R   A+ L   +  +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G    + TYN ++ G C    TD+A R+F  L          T+N++I A  K G +  A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL   +   G+ P   TY+++ ++ +    +E+  +++  M+++G + +      ++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 465 LCMKGNMKEA 474
           L  +G++  A
Sbjct: 734 LLQRGDITRA 743



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 12/392 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T +  Y ++I    KS   + A+ YF QM+D  + P +  +NSL+  +   C FDK 
Sbjct: 406 NPDTVT--YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFDK- 459

Query: 161 W-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           W     L        + LD   F  +I   C+ G + ++ ++ + +  +G  PN++ Y++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG C  G ++ A  L   +  +G+     TY  LI G  K    +D    + +M+ +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           VSP + TYN ++       + +   +L+  +        + TYN ++ GLCK     EA 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+   + +  +     T+N +I      G  D+A  LF  L +NG  P V TY+++    
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  +   DL   MEE G T +      ++   ++  D+ +A     ++ +  FS + 
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            T  + +  L   G  +E  +     +++ +E
Sbjct: 760 STASLFLD-LLSGGKYQEYHRFLPEKYKSFIE 790



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET---KLEPNDVVY 493
           E A  ++  + + G    +Y     +  +         S+ +N M      ++ PN   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQML 552
            ++I   C  G        LG + +KG   +  +++  +  LC D +  +A +++L +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 553 KLGLKPSVSLYNILYRA 569
           +LG  P+V  YNIL + 
Sbjct: 155 QLGCIPNVFSYNILLKG 171


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 276/568 (48%), Gaps = 31/568 (5%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
           LT +L+ R+ +L P    S F+ A+ Q   + P S+S    +LL  ++        T +L
Sbjct: 69  LTDSLLRRL-RLHPSACLSFFHLAT-QNSHYRPHSLS--YSILLHILTHARLFPEATTVL 124

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
           + +     ++++   ++  H+  ++         S +++ ++ A  +  ++  AL+ F +
Sbjct: 125 RQLMDLHCTNNYRAYAVCNHVFSVYKEFG---FCSGVFDMLMKAFAERGMTKHALYVFDE 181

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF-FSENRCKVEL-----------DVYSFG 179
           M   G  P            ++SCSF  G L    E R  V +           DVY   
Sbjct: 182 MSRIGRVPG-----------LRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCS 230

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           I++   C+ G ++ A EVL ++ + G  PNVV Y  L++G    GD E  + + R + E 
Sbjct: 231 IVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSER 290

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIHEYCNEGKVSE 298
           G+     T T+L+ G  K G   +  +   +++ + +       Y  L+  YC  G++ +
Sbjct: 291 GVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMED 350

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             ++ DEM    +  N+V  NTLI G CK  +V EAER+   M    + P+  +YN L+D
Sbjct: 351 AVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLD 410

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+C  G+  KAF L  ++  +G +P+VVTYN +I+     G+   A  L   M ERG+TP
Sbjct: 411 GYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +E++   ++D F +  D ++A  ++  +   GF+     +  +I GLC  G + EA  +F
Sbjct: 471 NEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVF 530

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           + M E  L P+++ Y  +  GYCK GN   A ++ G M  + +  +I  Y+S I  L + 
Sbjct: 531 DRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKI 590

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            K  +   LL +M   GL P+V  Y  L
Sbjct: 591 RKLNDVTDLLVEMQTRGLSPNVVTYGTL 618



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 234/468 (50%), Gaps = 36/468 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  M+D  ++P   ++N+LL    +     K ++   E     +   V ++  +IKG  +
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G  + A  + + + E G +PN +   +++D   K GD +RA ML+++I   G   +   
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +  +I GL K G   +    +++M+  G+SP   TY  L   YC  G V E F++   M 
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + ++ ++  YN+LI GL K  ++ +   LL +M+  G+SPNV+TY  LI G+CD  + D
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSK--------------------AGNSKMASDL 407
           KAF L+ ++   G +P+VV  + ++ +  +                    A ++K +  L
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKL 689

Query: 408 VRE---MEERGITPS------------EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           V+    +E + I  S             + Y I ID   +S  +++A  + S++   GF 
Sbjct: 690 VKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFL 749

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD +TY  LIH   + GN+ EA KL + M E  L PN  +YN +I G CK GN  RA RL
Sbjct: 750 PDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRL 809

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
             ++ +KGLVPN  +Y+  IG  C+ G   +A  L  +M + G+   +
Sbjct: 810 FYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 204/435 (46%), Gaps = 41/435 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +D   +G+L+ G C+ G +  A  + +++  +G   N+VI  +LI G CK G +  A+ +
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F  + +  L    ++Y  L+ G  + G     F   E+M  +G++P++ TYN +I    +
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 293 EGKVSEGFKLFDEMRHR-----EVAC------------------------------NVVT 317
            G   +   L+  M  R     E++C                              + V 
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           +NT+I GLCK  ++ EA  + D+MK  G+SP+ ITY  L DG+C  G   +AF++   ++
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
               S S+  YN LI    K       +DL+ EM+ RG++P+ VTY  LI  +     ++
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           KAF +Y  M + GF+P+V     ++  L     + EA+ + + M +  +     V+N   
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCS 686

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIAS---YSSTIGVLCQDGKWPEAEVLLNQMLKL 554
               K   +  A ++   +++  +  ++++   Y+  I  LC+ GK  EA  +L+ ++  
Sbjct: 687 DKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSR 746

Query: 555 GLKPSVSLYNILYRA 569
           G  P    Y  L  A
Sbjct: 747 GFLPDNFTYCTLIHA 761



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 35/248 (14%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V ++G LI G C+   L+KAF +  ++ E GF+PNVV+ + ++    ++  I  A ++ 
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 234 RKIGELGLVATQH-----------------------------------TYTVLICGLFKN 258
            K+ +  ++A  +                                    Y + I GL K+
Sbjct: 671 DKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKS 730

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G   +       +   G  P  +TY  LIH     G V E FKL DEM  + +  N+  Y
Sbjct: 731 GKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIY 790

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI GLCK   +  A+RL  ++   G+ PN +TYN LI  +C  G+ DKA RL  ++  
Sbjct: 791 NALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850

Query: 379 NGQSPSVV 386
            G S  ++
Sbjct: 851 EGISTRII 858



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 91/207 (43%), Gaps = 20/207 (9%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI----------------- 425
           P  ++Y++L+   + A     A+ ++R++ +   T +   Y +                 
Sbjct: 99  PHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGV 158

Query: 426 ---LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
              L+ +F      + A  ++  M + G  P + +   L+  L  KG  + A  +F+ + 
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
            T + P+  + ++++  +C+ G    A+ +L +M ++GL PN+ +Y+  +      G + 
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
             E +L  M + G+  +V    +L R 
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRG 305



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 20/143 (13%)

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN----------------- 489
           Q S + P   +Y +L+H L       EA+ +   + +     N                 
Sbjct: 93  QNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEF 152

Query: 490 ---DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
                V++M++  + + G +  AL +  EM+  G VP + S S  +G L Q G+   A +
Sbjct: 153 GFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVM 212

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           + +Q++  G+ P V + +I+  A
Sbjct: 213 VFDQIVGTGIVPDVYMCSIVVNA 235


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 245/504 (48%), Gaps = 36/504 (7%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N       Y  +IDA  K+   D A     +M +  + P   TF+S++  ++K     
Sbjct: 377 SDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVG 436

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K   +  E + + ++ +V ++G +I G  +      A +V +++   G   N  I  SL+
Sbjct: 437 KATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLV 496

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG------------------ 259
           +G  KNG IE+A+ LFR++ E G++     YT LI GLFK G                  
Sbjct: 497 NGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLL 556

Query: 260 -----------------LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                              K+   F E+MQ  G+ P   TYN +I     EGK ++  KL
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            + M+   +  N++TY+TLI GL +   V++A+ LL++M  +G SP  +T+ +++     
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
              +D    +   + + G    +  YN L+R     G ++ A  ++ EM  RGI P  +T
Sbjct: 677 GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +  LI    +S  ++ AF  Y  M   G SP+V T+  L+ GL   G + E+  + N M 
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           +  +EP+++ Y++++ GY K+ N   A+RL  EM  KG +P +++Y++ I    + G   
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMS 856

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A+ L N+M   G+ P+   Y+IL
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDIL 880



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 230/489 (47%), Gaps = 40/489 (8%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYS 177
           L+ +AL    +M   GV   + T N++L+ + +    D+                LDV  
Sbjct: 119 LAPEALL--AEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVG 176

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +  L+ G C+ GD+  AF V  +++  G   +VV Y SL+ G C+ G+++ A+ +   + 
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     TYT+ I    +     D F  YE+M   GV P + T + L+   C +G+ S
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E + LF EM     A N VTY  LI  L K  R  E+  LL ++   G+  ++I Y  L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------SKM------ 403
           D  C  G+ D+A  +F    S+  +P+ VTY VLI A  KAGN        S+M      
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416

Query: 404 ---------------------ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
                                A+D +REM+ERGI P+ VTY  +ID   +    E A ++
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           Y  M   G   + +    L++GL   G +++A  LF  M E  +  + V Y  +I G  K
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            GN   A ++  E+ EK L+P+   Y+  I  LC  GK  EAE  L +M   GLKP    
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596

Query: 563 YNILYRAKN 571
           YN +  A++
Sbjct: 597 YNTMIAAQS 605



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 220/487 (45%), Gaps = 36/487 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           + S++D + K    + A     +M   GV      +NSL+  + ++   D    +  +  
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  VE +V ++ + I   C    ++ AF +  ++   G  P+VV  ++L+ G CK+G   
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LFR++ ++G      TY +LI  L K     +      ++   GV   L  Y  L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EGK+ E   +F          N VTY  LI  LCK   V  AE++L +M+   IS
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV----------------- 390
           PNV+T++ +I+G    G   KA     ++K  G  P+VVTY                   
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 391 ------------------LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
                             L+    K G  + A  L REM ERG+    V YT LID   +
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           + ++  AF++   + +    PD   Y V I+ LCM G  KEA      M  T L+P+ V 
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN MI    +EG + +AL+LL  M    + PN+ +YS+ I  L + G   +A+ LLN+M 
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656

Query: 553 KLGLKPS 559
             G  P+
Sbjct: 657 SSGFSPT 663



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 256/533 (48%), Gaps = 46/533 (8%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           ++ G      F+    L    +   ++ N VT    Y  +ID   K++  +++L    ++
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVT----YCMLIDTLAKAQRGNESLSLLGEV 340

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF----SENRCKVELDVYSFGILIKGCCEA 188
           +  GV      + +L+ ++ K    D+    F    S+N      +  ++ +LI   C+A
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTP---NGVTYTVLIDALCKA 397

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+++ A +VL+++EE   SPNVV ++S+I+G  K G + +A    R++ E G+     TY
Sbjct: 398 GNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTY 457

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             +I G FK   Q+   + Y +M   GV  + +  + L++     GK+ +   LF EM  
Sbjct: 458 GTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE 517

Query: 309 REVACNVVTYNTLICG-----------------------------------LCKEMRVQE 333
           R V  + V Y TLI G                                   LC   + +E
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           AE  L++M+  G+ P+ +TYN +I      G+T KA +L N +K +   P+++TY+ LI 
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              +AG  + A  L+ EM   G +P+ +T+  ++ +  +    +   E++  M  +G   
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCA 697

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+  Y  L+  LC  G  ++A  +   M    + P+ + +N +I G+ K G+   A    
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTY 757

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M   G+ PN+A++++ +G L   G+  E++++LN+M K G++PS   Y+IL
Sbjct: 758 DQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 221/482 (45%), Gaps = 36/482 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID   K    + AL  +H+ML  GV       +SL+  + K+   +K    F E N
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V LD  ++  LI G  + G+L  AF+V  +L E    P+ V+Y   I+  C  G  +
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+    ++   GL   Q TY  +I    + G      +    M+ + + P+L TY+ LI
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636

Query: 288 HEYCNEGKVSEGFKLFDEMR----------HREV--AC---------------------- 313
                 G V +   L +EM           HR V  AC                      
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++  YNTL+  LC     ++A  +L++M   GI+P+ IT+N LI G   +G  D AF  
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           ++Q+  +G SP+V T+N L+     AG    +  ++ EM++RGI PS +TY IL+  + +
Sbjct: 757 YDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGK 816

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             +  +A  +Y  M   GF P V TY  LI      G M +A +LFN M    + P    
Sbjct: 817 QSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCT 876

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y++++ G+ K  N     + L +M EKG  P+  + SS      + G   EA  LL  + 
Sbjct: 877 YDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLY 936

Query: 553 KL 554
           K+
Sbjct: 937 KV 938



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 3/290 (1%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +YN ++  +  +G ++    L  EM  R V  + VT NT++ GLC++ RV  A  L + M
Sbjct: 105 SYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM 163

Query: 342 -KMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            +  GI   +V+ +N L+DG+C  G+ + AF +  ++K+ G    VV YN L+    +AG
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAG 223

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A D+V  M+  G+ P+ VTYT+ I  + R + ++ AF +Y  M + G  PDV T  
Sbjct: 224 EVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLS 283

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ GLC  G   EA  LF  M +    PN V Y M+I    K      +L LLGE+  +
Sbjct: 284 ALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSR 343

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+V ++  Y++ +  LC++GK  EA+ +    L     P+   Y +L  A
Sbjct: 344 GVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 38/236 (16%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT----- 422
           ++ R    L  + +S   V+YNV++  FS+ G     + L+ EM +RG+    VT     
Sbjct: 86  RSLRPALALLRSSESVDTVSYNVVMSGFSEQGGLAPEA-LLAEMCKRGVPFDAVTVNTVL 144

Query: 423 --------------------------------YTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                                           +  L+D + +  DME AF +   M+  G
Sbjct: 145 VGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQG 204

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
              DV  Y  L+ GLC  G +  A  + ++M    +EPN V Y M I  YC+      A 
Sbjct: 205 VGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAF 264

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L  EM  KG++P++ + S+ +G LC+DG++ EA  L  +M K+G  P+   Y +L
Sbjct: 265 SLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCML 320


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 275/572 (48%), Gaps = 29/572 (5%)

Query: 12  LTLNLISRMAKLPPLKA-----FSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAA 66
           LTL +I  +    PL +      S F W           S   +L LL   +S    + A
Sbjct: 49  LTLPIIISILSYKPLHSQPETLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDA 108

Query: 67  QTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII--DAHLKSRLSDQ 124
           ++L+L  IS     S     SL  HL +   +   P+  + L   +I    HL  ++   
Sbjct: 109 KSLLLNFIS-----SDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQI--- 160

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSF 178
               F++M     RP   T N+LL  +++S S     L FS        +  V+ +V +F
Sbjct: 161 ----FNKMKRLRFRPNLLTCNTLLNALVRSNSSHS--LVFSREVFQDAVKLGVQPNVNTF 214

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            ILI G C   +  +A  ++NQ+ E G  P+ V Y +++   CK   + + + L  ++  
Sbjct: 215 NILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKN 274

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            GL   ++TY +L+ G  K    K+  E  E M   G+ P ++TYN ++   C+EGK+ E
Sbjct: 275 SGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDE 334

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE-RLLDQMKMAGISPNVITYNKLI 357
             +L D+M   ++  +VVTYNTLI G C E R  +A  +L+++MK  G+  N +T+N +I
Sbjct: 335 AVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             FC  G+ D+A  +  ++  +G SP   TYN +I  + KAG    A  ++ EM  +G+ 
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
               T   L+ +      ++ A+ +    +K G+  D  TYG LI G         A KL
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           +  M ET +    + YN +I G C  G + +A+  L E+ EKGLVP+ ++ +  I   C 
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCW 573

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G   +A    N+M++  LKP +   NIL R 
Sbjct: 574 EGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 235/448 (52%), Gaps = 17/448 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++ A  K     Q      QM +SG+ P  NT+N   I V   C     WL   E  
Sbjct: 249 YNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYN---ILVHGYCKLK--WL--KEAA 301

Query: 169 CKVEL--------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             +EL        DV+++  +++G C+ G +++A  + +++E     P+VV Y +LIDGC
Sbjct: 302 EVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGC 361

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            ++   + A  L  ++   G+     T+ ++I      G   +      KM  +G SP  
Sbjct: 362 FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDC 421

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +TYN +I+ YC  GK++E +K+ DEM  + +  +  T NTL+  +C E ++ +A  L  +
Sbjct: 422 FTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK 481

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            +  G   + +TY  LI G+    + D+A +L+ ++K  G   +++TYN +IR    +G 
Sbjct: 482 ARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGK 541

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +  A D + E+ E+G+ P E T  I+I  +     +EKAF+ ++ M +    PD++T  +
Sbjct: 542 TDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNI 601

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           L+ GLC +G +++   LFN+ W +K +P D V YN++I  +CKE     A  L+ EM  K
Sbjct: 602 LLRGLCREGMLEKGLTLFNT-WISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGK 660

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            L P+  +Y++ +  L + G+  EAE L
Sbjct: 661 NLEPDRYTYNAIVTGLTKAGRTEEAEKL 688



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 174/350 (49%), Gaps = 15/350 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + K+    +A     +M   G++  + T N+LL  +      D  +    + R
Sbjct: 424 YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKAR 483

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +   LD  ++G LI G  +    ++A ++  +++E G    ++ Y ++I G C +G  +
Sbjct: 484 KRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTD 543

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A     ++ E GLV  + T  ++I G    G  +  F+F+ KM  + + P ++T N L+
Sbjct: 544 QAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILL 603

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG + +G  LF+    +    + VTYN +I   CKE R+++A  L+ +M+   + 
Sbjct: 604 RGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLE 663

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLF-------NQLKSNGQSPSVVT----YNVLIRAFS 396
           P+  TYN ++ G   AG T++A +L         Q+K+   SP + T    Y+  I +  
Sbjct: 664 PDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLC 723

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
             G  K A  L ++ E++G++ ++ TY  L+D  ++     K+F   SL+
Sbjct: 724 TQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR---RKSFTTTSLL 770



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 12/250 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +II     S  +DQA+   +++L+ G+ P  +T N ++       + +K + F ++  
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D+++  IL++G C  G L K   + N     G   + V Y  +I   CK   +E
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG----LQKDGFEFYEKMQ---LNGVSPSL 280
            A  L  ++    L   ++TY  ++ GL K G     +K   +F EK Q       SP L
Sbjct: 649 DAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPEL 708

Query: 281 YT----YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            T    Y+  I   C +GK  +  KLF +   + V+ N  TY  L+ GL K  +      
Sbjct: 709 GTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTS 768

Query: 337 LLDQMKMAGI 346
           LL  M  A I
Sbjct: 769 LLPFMVSATI 778


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 214/396 (54%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E+ V S+  ++ G C+ G++ +A  ++++L   GF P+V+ Y +L++G  +  D+    
Sbjct: 188 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 247

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +   + +  +     TYT+LI    ++   ++  + +++M   G+ P +Y Y  +I+  
Sbjct: 248 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +   F LFDEM  R +  N  TY  LI G CK   ++ AE +++ M+  G+  N 
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 367

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + +N L+DG+C  G  D+A RL N ++  G      T N++   F ++   + A  L+  
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           MEERG+ P+ V+++ILID + +  +  +A  ++ +M+K G +P V TY   I   C KG 
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M+EA KL N M E  L P+   Y  +I G    GN  RAL L  EM + GL  N+ +Y+ 
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  L +DG+  EA  L ++M K G+ P   +Y+ L
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 583



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 219/413 (53%), Gaps = 1/413 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCC 186
           +  QM+DSG+  R  ++ +++  + K     +      E  CK  +  V ++  L+ G  
Sbjct: 179 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 238

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E  D+    E+L+ +E+     NV  YT LI+   ++  IE A+ LF ++ + G+    +
Sbjct: 239 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 298

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            YT +I    K G  K  F  +++M    + P+ YTY  LI+  C  G++     + ++M
Sbjct: 299 IYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDM 358

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           + + V  N V +NTL+ G CK+  + EA RL + M+  G   +  T N +  GFC +   
Sbjct: 359 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 418

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A RL   ++  G +P+VV++++LI  + K  N   A  L + ME++G  PS VTY   
Sbjct: 419 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 478

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ + +   ME+A+++ + MQ+ G  PD YTY  LI G    GN+  A +LFN M +  L
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             N V Y ++I G  K+G +  A +L  EMN++G+VP+   YSS I  L + G
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRC 169
           I     +S   ++A      M + GV P   +F+ L+    K  +F +    F   E + 
Sbjct: 408 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           K    V ++   I+  C+ G + +A++++N+++E G  P+   YTSLIDG   +G+++RA
Sbjct: 468 KAP-SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRA 526

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++ +LGL     TYTV+I GL K+G   + F+ Y++M   G+ P    Y+ LI  
Sbjct: 527 LELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 586

Query: 290 YCNEGKVSEGFK 301
               G +  G +
Sbjct: 587 LHKVGPLVSGLE 598


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 214/396 (54%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E+ V S+  ++ G C+ G++ +A  ++++L   GF P+V+ Y +L++G  +  D+    
Sbjct: 184 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 243

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +   + +  +     TYT+LI    ++   ++  + +++M   G+ P +Y Y  +I+  
Sbjct: 244 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +   F LFDEM  R +  N  TY  LI G CK   ++ AE +++ M+  G+  N 
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 363

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + +N L+DG+C  G  D+A RL N ++  G      T N++   F ++   + A  L+  
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           MEERG+ P+ V+++ILID + +  +  +A  ++ +M+K G +P V TY   I   C KG 
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M+EA KL N M E  L P+   Y  +I G    GN  RAL L  EM + GL  N+ +Y+ 
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  L +DG+  EA  L ++M K G+ P   +Y+ L
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 579



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 219/413 (53%), Gaps = 1/413 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCC 186
           +  QM+DSG+  R  ++ +++  + K     +      E  CK  +  V ++  L+ G  
Sbjct: 175 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 234

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E  D+    E+L+ +E+     NV  YT LI+   ++  IE A+ LF ++ + G+    +
Sbjct: 235 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 294

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            YT +I    K G  K  F  +++M    + P+ YTY  LI+  C  G++     + ++M
Sbjct: 295 IYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDM 354

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           + + V  N V +NTL+ G CK+  + EA RL + M+  G   +  T N +  GFC +   
Sbjct: 355 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 414

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A RL   ++  G +P+VV++++LI  + K  N   A  L + ME++G  PS VTY   
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ + +   ME+A+++ + MQ+ G  PD YTY  LI G    GN+  A +LFN M +  L
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             N V Y ++I G  K+G +  A +L  EMN++G+VP+   YSS I  L + G
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRC 169
           I     +S   ++A      M + GV P   +F+ L+    K  +F +    F   E + 
Sbjct: 404 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           K    V ++   I+  C+ G + +A++++N+++E G  P+   YTSLIDG   +G+++RA
Sbjct: 464 KAP-SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRA 522

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++ +LGL     TYTV+I GL K+G   + F+ Y++M   G+ P    Y+ LI  
Sbjct: 523 LELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 582

Query: 290 YCNEGKVSEGFK 301
               G +  G +
Sbjct: 583 LHKVGPLVSGLE 594


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 253/526 (48%), Gaps = 19/526 (3%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS 87
           A S FN   R    H P SI    ++L S      ++   +L  K+ S  I  + +T   
Sbjct: 58  ALSSFN---RMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 88  LL---CHL----------TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           L+   CHL           ++      P T S  + ++I          +AL  F +M+ 
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTAS--FTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNK 193
            G +P    + +L+  + K+        L  S  +   + DV  +G LI   C+     +
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ 232

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AF + +++   G SPN+V   SL+   C  G+ +    L  ++ +  ++    + T ++ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K G+     +  + M  +GV P + TY  LI  +C   ++ E  K+FD M H+  A 
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP 352

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NV +YNTLI G CK  R+ +A  L ++M    + PN +TYN LI G C  G    A  LF
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++ + GQ P +VTY +L+    K  +   A  L++ +E   + P    YTI+ID   R+
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++E A +++S +   G  P+V+TY ++ HGLC +G + EA+KLF  M E     +   Y
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTY 532

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           N +  G+ +   + RA++LL EM  +G   ++++ +  +G+L  DG
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 202/401 (50%), Gaps = 2/401 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  SF  LIKG C  G + +A  + +++   GF P+VVIY +LI+G CK G    A  L 
Sbjct: 143 DTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + +         Y  LI  L K+  Q   F  + +M   G+SP++ T N L++  CN 
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+      L +EM   ++  N ++  T++  LCKE  V +A  ++D M  +G+ P+V+TY
Sbjct: 263 GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTY 322

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C   E D+A ++F+ +   G +P+V +YN LI  + K      A  L  EM  
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + + P+ VTY  LI        ++ A  ++  M   G  PD+ TY +L+  LC   ++ +
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  L  ++  + L+P+  +Y ++I G C+ G    A  L   ++ KGL PN+ +Y+    
Sbjct: 443 AMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTH 502

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
            LC+ G   EA  L  +M +         YN + +   +NN
Sbjct: 503 GLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 207/445 (46%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D AL  F++ML     P    F  +L  + K   +     L    +   +  +VY+  +L
Sbjct: 56  DDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVL 115

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    +N AF VL ++ ++G  P+   +T+LI G C  G I  A  LF K+   G 
Sbjct: 116 INSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGF 175

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 Y  LI GL K G           M+     P +  Y  LIH  C + + ++ F 
Sbjct: 176 QPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFN 235

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  + ++ N+VT N+L+  LC     +    LL++M  + I PN I+   ++D  C
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  + + +  +G  P VVTY  LI           A  +   M  +G  P+  
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y  LI+ + + + M+KA  ++  M +    P+  TY  LIHGLC  G +++A  LF  M
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P+ V Y +++   CK  +  +A+ LL  +    L P+I  Y+  I  +C+ G+ 
Sbjct: 416 VACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGEL 475

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A  L + +   GLKP+V  YNI+
Sbjct: 476 EDARDLFSNLSSKGLKPNVWTYNIM 500



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 143/312 (45%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D    + +M      PS+  +  ++       + S    L  +M    +  NV T N LI
Sbjct: 57  DALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLI 116

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C   RV  A  +L ++   G  P+  ++  LI G C  G+  +A  LF+++   G  
Sbjct: 117 NSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQ 176

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VV Y  LI    K G++  A  L+R ME+    P  V Y  LI S  +     +AF +
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNL 236

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +S M   G SP++ T   L++ LC  G  K  + L N M ++K+ PN +    ++   CK
Sbjct: 237 FSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCK 296

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG   +A  ++  M + G+ P++ +Y++ I   C   +  EA  + + M+  G  P+V  
Sbjct: 297 EGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFS 356

Query: 563 YNILYRAKNNIE 574
           YN L      IE
Sbjct: 357 YNTLINGYCKIE 368



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 112/221 (50%)

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +N+    +      D A   FN++      PS+V +  ++ + +K         L R+M+
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             GI  +  T  +LI+SF   + +  AF + + + K G  PD  ++  LI GLC++G + 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  LF+ M     +P+ V+Y  +I G CK G++  A+RLL  M +    P++  Y + I
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             LC+D +  +A  L ++M+  G+ P++   N L  A  N+
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 270/558 (48%), Gaps = 30/558 (5%)

Query: 23  LPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS- 80
           L PL A + F W   Q G  HT  S   +L +L+         AA+ +   +I   ++S 
Sbjct: 81  LHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLR---AAENVRNSMIKSCVSSH 137

Query: 81  -SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR--LSDQALFYFHQMLDSGV 137
            + F    L  H   L  +S N     RL+  +      SR  L D+    F  ML+ GV
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYN-----RLFMVL------SRFGLIDELNCLFKDMLNDGV 186

Query: 138 RPRSNTFNSLLIF------VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
            P   +FN+++        V+ + ++  G + F         D +++  LI G C+  +L
Sbjct: 187 EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFG-----FCCDSFTYTSLILGYCKIHEL 241

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             A++V   + + G   N V YT+LI G C+ G I+ A  LF ++ E G      TYTVL
Sbjct: 242 GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    + G + +  +F+E+M  NG+ P++YTY  LI  +C  GK+ EG ++   M  + +
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +VV +N LI G CK   +++A  +LD MK+  + PN  TYN+LI GFC     D+A  
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L N++  N  SP++VTYN LI    KA     A  L   M + G  P + T+   ID   
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +E+A +++  +++     + + Y  LI G C      +A  LF  M      PN +
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +N+++ G  KEG    A+ L+  M +    P + +Y+  I  + ++  +  A + L+QM
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 552 LKLGLKPSVSLYNILYRA 569
           +  G +P+V  Y    +A
Sbjct: 602 ISSGCQPNVVTYTAFIKA 619



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 219/487 (44%), Gaps = 31/487 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           + ++ID + K  + + A+     M  + V P S T+N L+    +  S D+     +   
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY 427

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN  K+  ++ ++  LI G C+A  ++ A+ + + + + GF P+   + + ID  CK G 
Sbjct: 428 EN--KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGK 485

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E+A  +F  + E    A +  YT LI G  K     D    +++M   G  P+  T+N 
Sbjct: 486 VEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNV 545

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+     EGKV +   L D M   +    V TY  LI  + +E     A   LDQM  +G
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PNV+TY   I  +C  G   +A  +  ++K  G       Y+VL+ A+   G    A 
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665

Query: 406 DLVREMEERGITPSEVTYTILIDSFV--------------------------RSDDMEKA 439
            ++  M + G  PS  TY+IL+   +                          +  D E  
Sbjct: 666 GVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEII 725

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             ++  M + G  P+V TY  LI GLC   ++  A +LFN M E+ + P++ ++N ++  
Sbjct: 726 TMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSS 785

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            CK G    ALRLL  M E   + ++ SY   +  L + G   +AE +   +L  G    
Sbjct: 786 CCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYD 845

Query: 560 VSLYNIL 566
             ++ +L
Sbjct: 846 EVVWKVL 852



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 222/520 (42%), Gaps = 62/520 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y  ++ A  +     +AL +F +M+++G+ P   T+  L+ +  K    D+G    S   
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML 357

Query: 166 ---------------ENRCK------------------VELDVYSFGILIKGCCEAGDLN 192
                          +  CK                  V  +  ++  LI G C    ++
Sbjct: 358 EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  +LN++ E   SPN+V Y +LI G CK   ++ A  L   + + G V  Q T+   I
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G  +   + +E ++      + + Y  LI  YC   K S+   LF  M      
Sbjct: 478 DCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N +T+N L+ GL KE +V++A  L+D M      P V TY  LI+      + D+A   
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            +Q+ S+G  P+VVTY   I+A+ + G    A ++V +++E GI      Y +L++++  
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA------------------ 474
              ++ AF +   M  +G  P   TY +L+  L  +   KE                   
Sbjct: 658 IGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIW 717

Query: 475 --------SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                   + LF  M E    PN   Y+ +I G CK  +   A RL   M E G+ P+  
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++S +   C+ G   EA  LL+ M++      +  Y +L
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLL 817



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 171/390 (43%), Gaps = 10/390 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           LY ++ID + K+     A   F +ML  G  P S TFN LL  + K    +    L    
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +   +  V+++ ILI+      D ++A   L+Q+   G  PNVV YT+ I   C+ G +
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +  KI E G++     Y VL+      G     F    +M   G  PS  TY+ L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +     E    EG  L           N    +     + K    +    L ++M   G 
Sbjct: 687 LKHLIFEKYNKEGMGL---------DLNSTNISVDNANIWKIADFEIITMLFEKMVEQGC 737

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TY+KLI G C       AFRLFN +K +G SPS   +N L+ +  K G  + A  
Sbjct: 738 VPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALR 797

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M E        +Y +L+       + EKA E++  +   G++ D   + VL+ GL 
Sbjct: 798 LLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLV 857

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            KG + E S+L + M +T    +   + M+
Sbjct: 858 RKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 192/461 (41%), Gaps = 62/461 (13%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFF 164
           SR Y  +I    + +  D+A+   ++M ++ + P   T+N+L+  + K+   D  W L  
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              +     D  +F   I   C+ G + +A +V   L+E     N  +YT+LIDG CK  
Sbjct: 460 LMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAE 519

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
               A +LF+++   G      T+ VL+ GL K G  +D     + M      P+++TY 
Sbjct: 520 KFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYT 579

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER-------- 336
            LI E   E          D+M       NVVTY   I   C++ R+ EAE         
Sbjct: 580 ILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639

Query: 337 --LLD-------------------------QMKMAGISPNVITYNKLIDGFC-------- 361
             LLD                         +M   G  P+  TY+ L+            
Sbjct: 640 GILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699

Query: 362 ---DAGETDKAFR---------------LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
              D   T+ +                 LF ++   G  P+V TY+ LI+   K  +  +
Sbjct: 700 MGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSL 759

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   M+E GI+PSE  +  L+ S  +    E+A  +   M +      + +Y +L+ 
Sbjct: 760 AFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVC 819

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           GL  +GN ++A ++F S+       ++VV+ +++ G  ++G
Sbjct: 820 GLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKG 860



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 66/234 (28%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI------------- 152
           S +Y+ +++A+      D A     +M D+G  P   T++ LL  +I             
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDL 704

Query: 153 -------------KSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
                        K   F+   + F    E  C   ++ YS   LIKG C+   L+ AF 
Sbjct: 705 NSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYS--KLIKGLCKVEHLSLAFR 762

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCK---------------------------------- 222
           + N ++E G SP+  I+ SL+  CCK                                  
Sbjct: 763 LFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLF 822

Query: 223 -NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
             G+ E+A+ +FR +   G    +  + VL+ GL + G   +  +  + M+  G
Sbjct: 823 EQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 237/459 (51%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I   LKSR   +A+  + +M+  G RP   T++SL++ + K    +       E  
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +VY+F I I+    AG +N+A+E+L ++++ G  P+VV YT LID  C    ++
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F K+        + TY  L+     N       +F+ +M+ +G  P + T+  L+
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G   E F   D MR + +  N+ TYNTLICGL +  R+ +A  + D M+  G+ 
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P   TY   ID +  +G++  A   F ++K+ G +P++V  N  + + +KAG  + A  +
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              +++ G+ P  VTY +++  + +  ++++A ++ S M ++   PDV     LI+ L  
Sbjct: 493 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA K+F  M E KL+P  V YN ++ G  K G    A+ L   M +KG  PN  +
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +++    LC++ +   A  +L +M+ +G  P V  YN +
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 651



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 236/508 (46%), Gaps = 49/508 (9%)

Query: 103  VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
            V  S  Y  ++  + K    D+A+    +M+++   P     NSL+  + K+   D+ W 
Sbjct: 502  VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWK 561

Query: 162  LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            +F      K++  V ++  L+ G  + G + +A E+   + + G  PN + + +L D  C
Sbjct: 562  MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 621

Query: 222  KNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            KN ++  A KMLF K+ ++G V    TY  +I GL KNG  K+   F+ +M+   V P  
Sbjct: 622  KNDEVTLALKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 679

Query: 281  YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-----------------------NVVT 317
             T   L+      G + + +K+     +   +C                       N V+
Sbjct: 680  VTLCTLLPGVVKAGLIEDAYKIIANFLY---SCADQPANLFWEDLMGSILAEAGIDNAVS 736

Query: 318  YNTLIC--GLC---------------KEMRVQEAERLLDQM-KMAGISPNVITYNKLIDG 359
            ++  +   G+C               K      A  L ++  K  G+ P + TYN LI G
Sbjct: 737  FSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGG 796

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
              +A   + A  +F Q+K+ G  P V TYN L+ A+ K+G      ++ +EM      P+
Sbjct: 797  LLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPN 856

Query: 420  EVTYTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             +T+ I+I   V++ +++ A ++ Y LM    FSP   TYG LI GL   G + EA +LF
Sbjct: 857  TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 916

Query: 479  NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
              M +    PN  +YN++I G+ K G +  A  L   M ++G+ P++ +YS  +  LC  
Sbjct: 917  EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 976

Query: 539  GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G+  E      ++ + GL P V  YN++
Sbjct: 977  GRVDEGLHYFRELKESGLNPDVVCYNLI 1004



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 227/498 (45%), Gaps = 40/498 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + ++ D   K+     AL    +M+D G  P   T+N+++  ++K+    +   FF + +
Sbjct: 613  FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 672

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ---------------------LEEMGFS 207
              V  D  +   L+ G  +AG +  A++++                       L E G  
Sbjct: 673  KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGID 732

Query: 208  PNVVIYTSLI-DGCCKNGD---------------IERAKMLFRKIG-ELGLVATQHTYTV 250
              V     L+ +G C++GD                  A+MLF K   +LG+     TY +
Sbjct: 733  NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNL 792

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            LI GL +  + +   + + +++  G  P + TYN L+  Y   GK+ E F+++ EM   E
Sbjct: 793  LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLL-DQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               N +T+N +I GL K   V +A  L  D M     SP   TY  LIDG   +G   +A
Sbjct: 853  CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912

Query: 370  FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             +LF  +   G  P+   YN+LI  F KAG +  A  L + M + G+ P   TY++L+D 
Sbjct: 913  KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972

Query: 430  FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEP 488
                  +++    +  +++SG +PDV  Y ++I+GL     ++EA  LFN M +++ + P
Sbjct: 973  LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032

Query: 489  NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            +   YN +I      G    A ++  E+   GL PN+ ++++ I      GK   A  + 
Sbjct: 1033 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1092

Query: 549  NQMLKLGLKPSVSLYNIL 566
              M+  G  P+   Y  L
Sbjct: 1093 QTMVTGGFSPNTGTYEQL 1110



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 193/394 (48%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           L+ YS+  LI    ++    +A EV  ++   GF P++  Y+SL+ G  K  DIE    L
Sbjct: 188 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGL 247

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            +++  LGL    +T+T+ I  L + G   + +E  ++M   G  P + TY  LI   C 
Sbjct: 248 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 307

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
             K+    ++F +M+      + VTY TL+        +    +   +M+  G  P+V+T
Sbjct: 308 ARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVT 367

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  L+D  C AG   +AF   + ++  G  P++ TYN LI    +      A ++   ME
Sbjct: 368 FTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNME 427

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G+ P+  TY + ID + +S D   A E +  M+  G +P++      ++ L   G  +
Sbjct: 428 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 487

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA ++F  + +  L P+ V YNMM+  Y K G    A++LL EM E    P++   +S I
Sbjct: 488 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLI 547

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             L +  +  EA  +  +M ++ LKP+V  YN L
Sbjct: 548 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 581



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 10/391 (2%)

Query: 193 KAFEVLNQLEEMGFSPNVV----------IYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           +A  V  ++EEM +  +++           Y ++       G + +A    RK+ E G V
Sbjct: 128 EALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFV 187

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
              ++Y  LI  L K+    +  E Y +M L+G  PSL TY+ L+        +     L
Sbjct: 188 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGL 247

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM    +  NV T+   I  L +  ++ EA  +L +M   G  P+V+TY  LID  C 
Sbjct: 248 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 307

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A + D A  +F ++K+    P  VTY  L+  FS   +    +    EME+ G  P  VT
Sbjct: 308 ARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVT 367

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +TIL+D+  ++ +  +AF    +M+  G  P+++TY  LI GL     + +A ++F++M 
Sbjct: 368 FTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNME 427

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++P    Y + I  Y K G+S  AL    +M  KG+ PNI + ++++  L + G+  
Sbjct: 428 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 487

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           EA+ +   +  +GL P    YN++ +  + +
Sbjct: 488 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 518



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 230/534 (43%), Gaps = 73/534 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +IDA   +R  D A   F +M     +P   T+ +LL     +   D    F+SE  
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEME 357

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + DV +F IL+   C+AG+  +AF  L+ + + G  PN+  Y +LI G  +   ++
Sbjct: 358 KDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLD 417

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +  LG+  T +TY V I    K+G      E +EKM+  G++P++   N  +
Sbjct: 418 DALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 477

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +     G+  E  ++F  ++   +  + VTYN ++    K   + EA +LL +M      
Sbjct: 478 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCE 537

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI  N LI+    A   D+A+++F ++K     P+VVTYN L+    K G  + A +L
Sbjct: 538 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG--- 464
              M ++G  P+ +T+  L D   ++D++  A +M   M   G  PDV+TY  +I G   
Sbjct: 598 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657

Query: 465 -------LCMKGNMKE------------------------------------ASKLFNSM 481
                  +C    MK+                                    A +  N  
Sbjct: 658 NGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLF 717

Query: 482 WETKLEP--------NDVVYN--MMIFGYCKEG--------------NSYRALRLLGEMN 517
           WE  +          N V ++  ++  G C++G              N+    R+L E  
Sbjct: 718 WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKF 777

Query: 518 EK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            K  G+ P + +Y+  IG L +      A+ +  Q+   G  P V+ YN L  A
Sbjct: 778 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDA 831



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 155/327 (47%)

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           G   LV T  T   ++  L  +G  ++    ++ MQ   +     TY  +      +G +
Sbjct: 112 GNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGL 171

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +      +MR      N  +YN LI  L K     EA  +  +M + G  P++ TY+ L
Sbjct: 172 RQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSL 231

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           + G     + +    L  ++++ G  P+V T+ + IR   +AG    A ++++ M++ G 
Sbjct: 232 MVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 291

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTYT+LID+   +  ++ A E+++ M+     PD  TY  L+       ++   ++
Sbjct: 292 GPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQ 351

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            ++ M +    P+ V + +++   CK GN   A   L  M ++G++PN+ +Y++ I  L 
Sbjct: 352 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLL 411

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +  +  +A  + + M  LG+KP+   Y
Sbjct: 412 RVHRLDDALEIFDNMESLGVKPTAYTY 438



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y  +I+   K+  +D A   F +M+  GVRP                            
Sbjct: 930  IYNILINGFGKAGEADAACALFKRMVKEGVRP---------------------------- 961

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                  D+ ++ +L+   C  G +++      +L+E G +P+VV Y  +I+G  K   +E
Sbjct: 962  ------DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015

Query: 228  RAKMLFRKIGE-LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A +LF ++ +  G+    +TY  LI  L   G+ ++  + Y ++Q  G+ P+++T+N L
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            I  Y   GK    + ++  M     + N  TY  L
Sbjct: 1076 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 107  RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            + Y  ++D        D+ L YF ++ +SG+ P    +N ++  + K    ++  + F+E
Sbjct: 964  KTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNE 1023

Query: 167  NRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             +    +  D+Y++  LI     AG + +A ++ N+++  G  PNV  + +LI G   +G
Sbjct: 1024 MKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1083

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVL 251
              E A  +++ +   G      TY  L
Sbjct: 1084 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 242/487 (49%), Gaps = 8/487 (1%)

Query: 77  RITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
           +I++   +P   LC       + SN       Y  I+   L +   ++AL  F +M+ S 
Sbjct: 25  QISNHGASPTLSLCGFCFWIRAFSN-------YRKILRNGLHNLQFNEALDLFTRMVHSR 77

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAF 195
             P    F  LL  + K   FD     F + +   +   +Y+  I++   C +    +A 
Sbjct: 78  PLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRAS 137

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
             L ++ ++GF P++V +TSL+ G C    IE A  LF +I  +G      TYT LI  L
Sbjct: 138 CFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCL 197

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            KN       E + +M  NG+ P++ TYN L+   C  G+ S+   L  +M  R +  NV
Sbjct: 198 CKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNV 257

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +T+  LI    K  ++ EA+ L   M    + P+V TY  LI+G C  G  D+A ++F  
Sbjct: 258 ITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYL 317

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++SNG  P+ VTY  LI  F K+   +  + +  EM ++G+  + +TYT+LI  +     
Sbjct: 318 MESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGR 377

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            + A E+++ M      PD+ TY VL+ GLC  G +++A  +F  M + +++ N V Y +
Sbjct: 378 PDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTI 437

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G CK G    A  L   +  KG+ PN+ +Y++ I   C+ G   EA+ L  +M + G
Sbjct: 438 IIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497

Query: 556 LKPSVSL 562
             P+ S+
Sbjct: 498 FLPNESV 504



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 164/299 (54%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +E+MQ+ G+SP LYT N +++  C   +         +M       ++VT+ +L+ G C 
Sbjct: 105 FEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCH 164

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             R+++A  L DQ+   G  PNV+TY  LI   C     + A  +FNQ+  NG  P+VVT
Sbjct: 165 WNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVT 224

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN L+    + G    A+ L+R+M +RGI P+ +T+T LID+FV+   + +A E+Y +M 
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMI 284

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           +    PDV+TY  LI+GLC  G + EA ++F  M      PN+V Y  +I G+CK     
Sbjct: 285 QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE 344

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++  EM++KGLV N  +Y+  I   C  G+   A+ + NQM      P +  YN+L
Sbjct: 345 DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVL 403



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 21/289 (7%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTL-ICGLCKEMRV-----------------QEAERL 337
           V +GF L    RHR    N     TL +CG C  +R                   EA  L
Sbjct: 13  VKKGFHLH---RHRLQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDL 69

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M  +   P+++ + +L+         D    LF Q++  G SP + T N+++    +
Sbjct: 70  FTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCR 129

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +     AS  + +M + G  P  VT+T L+  F   + +E A  ++  +   GF P+V T
Sbjct: 130 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVT 189

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LIH LC   ++  A ++FN M +  + PN V YN ++ G C+ G    A  LL +M 
Sbjct: 190 YTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMM 249

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++G+ PN+ ++++ I    + GK  EA+ L   M+++ + P V  Y  L
Sbjct: 250 KRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFF 164
           R Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F 
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT-EARKMFD 328

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ LI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +++A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M    +SP    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C   K  +  +L  EM  R +  + + +N++I   CKE RV E+E+L D M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P++ITY+ LIDG+C AG+ D+A +L   + S G  P  VTYN LI  + K    + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L REME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HG
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC      EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 525 IASYS 529
           + +YS
Sbjct: 689 VRTYS 693



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 37/437 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G  + GDL+KA+   +++ + G  PNVV Y+S+I   CK   +++A  + 
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G++    TY  ++ G   +G  K+   F +KM  +GV P + TYN L+   C  
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNT--------------------------------- 320
           G+ +E  K+FD M  R +   + TY T                                 
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 321 --LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LIC   K+ +V +A  +  +M+  G++P+ +TY  +I   C +G  + A R F Q+  
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              SP  + YN LI +         A +L+ EM +RGI    + +  +IDS  +   + +
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           + +++ LM + G  PD+ TY  LI G C+ G M EA+KL  SM    ++P+ V YN +I 
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      AL L  EM   G+ P+I +Y+  +  L Q  +   A+ L   + + G + 
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 559 SVSLYNILYRA--KNNI 573
            +S YNI+     KNN+
Sbjct: 618 ELSTYNIILHGLCKNNL 634



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 242/521 (46%), Gaps = 39/521 (7%)

Query: 91  HLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
            L Q+ P          + Y ++I+   K    D+A   +H+MLD G+ P   T++S++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K+ + DK   +  S  +  V  +  ++  ++ G C +G   +A   L ++   G  P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SL+D  CKNG    A+ +F  + + GL     TY  L+ G    G   +     
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M  NG+ P+ Y ++ LI  Y  +GKV +   +F +MR + +  + VTY T+I  LCK 
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKL-------------------------------- 356
            RV++A R  +QM    +SP  I YN L                                
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 357 ---IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              ID  C  G   ++ +LF+ +   G  P ++TY+ LI  +  AG    A+ L+  M  
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  VTY  LI+ + +   ME A  ++  M+ SG SPD+ TY +++ GL        
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  + E+  +     YN+++ G CK   +  ALR+   +    L     +++  IG
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + G+  EA+ L   +   GL P V  Y+++  A+N IE
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM--AENLIE 701



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 218/435 (50%), Gaps = 38/435 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ +LG +    +Y +L+ GL      ++  E  + M  +G    P + +Y  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +  EG + + +  + EM  R +  NVVTY+++I  LCK   + +A  +L  M   G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN ++ G+C +G+  +A     ++ S+G  P VVTYN L+    K G    A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 407 LVREMEERGITPSEVTY-----------------------------------TILIDSFV 431
           +   M +RG+ P   TY                                   +ILI ++ 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +++A  ++S M++ G +PD  TYG +I  LC  G +++A + F  M + +L P ++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN +I   C      +A  L+ EM ++G+  +   ++S I   C++G+  E+E L + M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 552 LKLGLKPSVSLYNIL 566
           +++G+KP +  Y+ L
Sbjct: 506 VRIGVKPDIITYSTL 520



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           ++  +I A+ K    DQA+  F +M   G+ P + T+ +++  + KS   +    +F   
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            + R      VY+   LI   C     +KA E++ ++ + G   + + + S+ID  CK G
Sbjct: 436 IDERLSPGNIVYNS--LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  ++ LF  +  +G+     TY+ LI G    G   +  +    M   G+ P   TYN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ +   LF EM    V+ +++TYN ++ GL +  R   A+ L   +  +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G    + TYN ++ G C    TD+A R+F  L          T+N++I A  K G +  A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL   +   G+ P   TY+++ ++ +    +E+  +++  M+++G + +      ++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 465 LCMKGNMKEA 474
           L  +G++  A
Sbjct: 734 LLQRGDITRA 743



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 169/367 (46%), Gaps = 11/367 (2%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T +  Y ++I    KS   + A+ YF QM+D  + P +  +NSL+  +   C FDK 
Sbjct: 406 NPDTVT--YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFDK- 459

Query: 161 W-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           W     L        + LD   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG C  G ++ A  L   +  +G+     TY  LI G  K    +D    + +M+ +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           VSP + TYN ++       + +   +L+  +        + TYN ++ GLCK     EA 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+   + +  +     T+N +I      G  D+A  LF  L +NG  P V TY+++    
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  +   DL   MEE G T +      ++   ++  D+ +A     ++ +  FS + 
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759

Query: 456 YTYGVLI 462
            T  + +
Sbjct: 760 STASLFL 766



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET---KLEPNDVVY 493
           E A  ++  + + G    +Y     +  +         S+ +N M      ++ PN   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQML 552
            ++I   C  G        LG + +KG   +  +++  +  LC D +  +A +++L +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 553 KLGLKPSVSLYNILYRA 569
           +LG  P+V  YNIL + 
Sbjct: 155 QLGCIPNVFSYNILLKG 171


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 237/459 (51%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           + S+++   ++++ ++A     +M   G  P   T+ +L    +K  + D       E  
Sbjct: 290 FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAV 349

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V++  Y+  IL+   C+ G++ KA EVL +  E G +P  V + ++++G C+ GDI 
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A     K+  +GL     TY  L+    +    ++  +  +KM   GV P++ TYN LI
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y         F++ +EM  + +  NV++Y  LI  LCK+  + EAE +L  M   G+ 
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN   YN LIDG C AG+   AFR F+++ +    P++VTYN+LI    K G    A +L
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E+  +G++   +TY  LI  +  + +++KA E+Y  M+KSG  P + TY  LI G C 
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CG 648

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           K  +    K++  M +  L P+ V+YN +I  Y + G+  +A  L   M  +G+ P+  +
Sbjct: 649 KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMT 708

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I    ++G+  + + L+N M   GL P    Y+IL
Sbjct: 709 YNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDIL 747



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 238/481 (49%), Gaps = 41/481 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FS 165
           Y ++ D HLK    D ++    + +  GV+    T + LL  + K  + +K       F 
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFL 384

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN     + V+ F  ++ G C+ GD+NKA+  + ++E +G  PN V Y SL+   C+  +
Sbjct: 385 ENGL-APVGVF-FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKN 442

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A+   +K+ E G++    TY  LI G  ++ L    F+  E+M+  G+ P++ +Y C
Sbjct: 443 MEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGC 502

Query: 286 LIHEYCNE-----------------------------------GKVSEGFKLFDEMRHRE 310
           LI+  C +                                   GK+ + F+ FDEM  RE
Sbjct: 503 LINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE 562

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +   +VTYN LI GLCK+ +V EAE L  ++   G+S +VITYN LI G+  AG   KA 
Sbjct: 563 IVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKAL 622

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L+  +K +G  P++ TY+ LI    K G   +   + +EM +  + P  V Y  LI  +
Sbjct: 623 ELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCY 681

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           V   D++KA  ++S M+  G  PD  TY  LI G   +G M +   L N M    L P  
Sbjct: 682 VEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             Y+++I G+CK  +   A     EM E G  P+++   + I  L ++G+  +A+V+ ++
Sbjct: 742 ETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSE 801

Query: 551 M 551
           M
Sbjct: 802 M 802



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 240/466 (51%), Gaps = 4/466 (0%)

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKV 171
           +++ + ++  +  L  F ++++SG+RP    +   +   +K     +   L     R  V
Sbjct: 154 LESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGV 213

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
              V+ + ++I G C+   +  A ++ +++ +   +PN + Y +LIDG CK G +E A  
Sbjct: 214 SPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +  ++    +  T  T+  L+ GL +  + ++     E+M++ G  P  +TY  L   + 
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G V     L +E   + V     T + L+  LCKE  +++AE +L +    G++P  +
Sbjct: 334 KCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV 393

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            +N +++G+C  G+ +KA+    ++++ G  P+ VTYN L++ F +  N + A   +++M
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E+G+ P+  TY  LID + RS   ++ F++   M+K G  P+V +YG LI+ LC   N+
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA  +   M    + PN  +YNM+I G C  G    A R   EM  + +VP + +Y+  
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNIL 573

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
           I  LC+ GK  EAE L +++ + GL   V  YN L   Y +  N++
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQ 619



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 256/563 (45%), Gaps = 48/563 (8%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           TLN   +   LP  K F   +   +Q    T  + +  L+  + + + H H      +L+
Sbjct: 15  TLNKPQKSLLLPSCKPFC--SLTEKQEPTSTTNNSTTNLQGQVQEQARHEHVQKLQTLLQ 72

Query: 73  IISGRITSSSFTPRSLL---------CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSD 123
              GR  ++    RS+L          HL  LF  SS P+ K    + ++    +S++  
Sbjct: 73  --QGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTPM-KPLFSDMLLSICSESKMVS 129

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           ++   +  M   GV P   + N  L  ++ +  ++     FSE                 
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE----------------- 172

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                            + E G  P+  +Y   I    K GD++RA  L   +   G+  
Sbjct: 173 -----------------IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSP 215

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y V+I GL K    KD  + +++M    V+P+  TYN LI  YC  G++ E F + 
Sbjct: 216 GVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIR 275

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           + M+   V   ++T+N+L+ GLC+   ++EA+R+L++M++ G  P+  TY  L DG    
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  D +  L  +    G      T ++L+ A  K GN + A +++++  E G+ P  V +
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +++ + +  D+ KA+     M+  G  P+  TY  L+   C   NM+EA K    M E
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVE 455

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + PN   YN +I GY +     R  ++L EM +KGL PN+ SY   I  LC+D    E
Sbjct: 456 KGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILE 515

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           AEV+L  M+  G+ P+  +YN+L
Sbjct: 516 AEVILGDMVHRGVVPNAQIYNML 538



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 231/460 (50%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I    K +    A   F +MLD  V P   T+N+L+    K    ++ +      
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + VE  + +F  L+ G C A  + +A  VL ++E  GF P+   YT+L DG  K G++
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + +  L  +    G+    +T ++L+  L K G  +   E  +K   NG++P    +N +
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTI 398

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++ YC  G +++ +   ++M    +  N VTYN+L+   C+   ++EAE+ + +M   G+
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TYN LIDG+  +   D+ F++  +++  G  P+V++Y  LI    K  N   A  
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ +M  RG+ P+   Y +LID    +  ++ AF  +  M      P + TY +LI+GLC
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            KG + EA  L + +    L  + + YN +I GY   GN  +AL L   M + G+ P + 
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y   I    ++G     E +  +ML++ L P   +YN L
Sbjct: 639 TYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNAL 677



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 144/293 (49%), Gaps = 2/293 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
           +A      M+  GV P +  +N L+     +      + FF E   + +   + ++ ILI
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C+ G + +A  + +++   G S +V+ Y SLI G    G++++A  L+  + + G+ 
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIK 634

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            T +TY  LI G  K GL      + E +Q+N V P    YN LIH Y   G V +   L
Sbjct: 635 PTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLV-PDRVIYNALIHCYVEHGDVQKACSL 693

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
              M  + +  + +TYN LI G  KE R+ + + L++ MK+ G+ P   TY+ LI G C 
Sbjct: 694 HSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCK 753

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
             + D A+  + ++  NG +PSV   + LI    + G S  A  +  EM  +G
Sbjct: 754 LKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 103 VTKSRLYESIIDAH-LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           V  +++Y  +ID   +  +L D A  +F +M+   + P   T+N L+  + K     KG 
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKD-AFRFFDEMVAREIVPTLVTYNILINGLCK-----KGK 582

Query: 162 LFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           +  +EN      R  +  DV ++  LI G   AG++ KA E+   +++ G  P +  Y  
Sbjct: 583 VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHR 642

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI GC K G +   K +++++ ++ LV  +  Y  LI    ++G  +     +  M+  G
Sbjct: 643 LIAGCGKEGLVLVEK-IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + P   TYNCLI  +  EG++ +   L ++M+ R +     TY+ LI G CK      A 
Sbjct: 702 IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAY 761

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
               +M   G +P+V   + LI G  + G +  A  + +++   G+ 
Sbjct: 762 VWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 252/545 (46%), Gaps = 49/545 (8%)

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
           +HS +  + LI K+++       F     + HL    P S        ++ +II    ++
Sbjct: 45  THSQSTYRALIHKLLT-------FRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRA 97

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYS 177
           R+    +     +   G  P    FNS+L  ++K    D    F+ +      ++ D Y+
Sbjct: 98  RMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKE-DIDLARKFYRKKMMGAGIQGDDYT 156

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +GIL+KG C    + + F++L  ++  G  PNVVIY +L+   C NG + RA+ L  +I 
Sbjct: 157 YGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIK 216

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E        T+ VLICG  K           EK    G  P + T   ++   CN G+V+
Sbjct: 217 E----PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVT 272

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  ++ + +  +    +VV +NTLI G CK  +V+    LL +M+  G  PN  TYN LI
Sbjct: 273 EAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALI 332

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE-RGI 416
            GFC++G  + A  +FN +K++G + + VT++ LI+     G ++    ++  MEE RG+
Sbjct: 333 SGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGV 392

Query: 417 T----------------------------------PSEVTYTILIDSFVRSDDMEKAFEM 442
                                              P  V  ++ I  F     +++A  +
Sbjct: 393 CGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRV 452

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           Y  M   G  P    Y  LIHG C +G ++EA +L N M      P    +N +I G+C+
Sbjct: 453 YDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCR 512

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    AL+LL +M  +G VP+  SYS  I  LC+   + +A  LL QM++ G+ P   +
Sbjct: 513 LGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLI 572

Query: 563 YNILY 567
           +N L+
Sbjct: 573 WNSLF 577



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 36/363 (9%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   TFN L+    K  +F +  +   ++       DV +   +++  C  G + +A E+
Sbjct: 218 PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEI 277

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L ++E  G   +VV + +LI G CK G ++    L +++   G +    TY  LI G  +
Sbjct: 278 LERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCE 337

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NV 315
           +G+ +   + +  M+ +G++ +  T++ LI    + G+  +GFK+ + M      C  ++
Sbjct: 338 SGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSI 397

Query: 316 VTYNTL---------------------------------ICGLCKEMRVQEAERLLDQMK 342
             YN++                                 I G C+E  +QEA+R+ DQM 
Sbjct: 398 SPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMN 457

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G  P+ + Y+ LI GFC  G   +A  L N++   G  P   T+N LI  F + G   
Sbjct: 458 NEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDG 517

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+ +M  RG  P   +Y+ LID+  R    +KA  +   M ++G +PD   +  L 
Sbjct: 518 SALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLF 577

Query: 463 HGL 465
           H L
Sbjct: 578 HCL 580



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 1/157 (0%)

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEAS 475
           T S+ TY  LI   +          +   M KS G  PD   +  +I GL     +++  
Sbjct: 45  THSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVI 104

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           K+ + +      P+  ++N ++    KE           +M   G+  +  +Y   +  L
Sbjct: 105 KVLDLVTRYGKNPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGL 164

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           C   +  E   LL  +   GLKP+V +YN L  A  N
Sbjct: 165 CLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCN 201


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 227/458 (49%), Gaps = 3/458 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC- 169
           +I+++ +  L D+ L     M+D  G++P ++ +N +L  ++   S     +  ++    
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            ++ DV +F +LIK  C A  L  A  +L  +   G  P+   +T+++ G  + GD++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIH 288
             +  ++ E G   +  +  V++ G  K G  +D   F ++M   +G  P  YT+N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G V    ++ D M       +V TYN++I GLCK   V+EA  +LDQM     SP
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N +TYN LI   C   + ++A  L   L S G  P V T+N LI+      N ++A +L 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  +G  P E TY +LIDS      +++A  M   M+ SG +  V TY  LI G C  
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
              +EA ++F+ M    +  N V YN +I G CK      A +L+ +M  +G  P+  +Y
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +S +   C+ G   +A  ++  M   G +P +  Y  L
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 213/423 (50%), Gaps = 10/423 (2%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGW----LFFSE 166
           I+    K    + AL +  +M +  G  P   TFN+L+  + K+           +   E
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                + DVY++  +I G C+ G++ +A EVL+Q+     SPN V Y +LI   CK   +
Sbjct: 325 G---YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L R +   G++    T+  LI GL      +   E +E+M+  G  P  +TYN L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C++GK+ E   +  +M     A +V+TYNTLI G CK  + +EAE + D+M++ G+
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           S N +TYN LIDG C +   + A +L +Q+   GQ P   TYN L+  F + G+ K A+D
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +V+ M   G  P  VTY  LI    ++  +E A ++   +Q  G +   + Y  +I GL 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPN 524
            K    EA  LF  M E    P D V Y ++  G C  G   R A+  L E+ EKG VP 
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 525 IAS 527
            +S
Sbjct: 682 FSS 684



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 228/472 (48%), Gaps = 38/472 (8%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKA 194
           G++P  +TFN L+  + ++       L   +     +  D  +F  +++G  E GDL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG-ELGLVATQHTYTVLIC 253
             +  Q+ E G S + V    ++ G CK G +E A    +++  + G    Q+T+  L+ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G  K   E  + M   G  P +YTYN +I   C  G+V E  ++ D+M  R+ + 
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 314 NVVTYNTLICGLCKEMRVQEAERL-----------------------------------L 338
           N VTYNTLI  LCKE +V+EA  L                                    
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           ++M+  G  P+  TYN LID  C  G+ D+A  +  Q++ +G + SV+TYN LI  F KA
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
             ++ A ++  EME  G++ + VTY  LID   +S  +E A ++   M   G  PD YTY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+   C  G++K+A+ +  +M     EP+ V Y  +I G CK G    A +LL  +  
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL-YNILYRA 569
           KG+     +Y+  I  L +  K  EA  L  +ML+    P  ++ Y I++R 
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 2/292 (0%)

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP    Y  ++      G   +  K+ ++M+         T+  LI    +     E   
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139

Query: 337 LLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           ++D M    G+ P+   YN++++   D            ++   G  P V T+NVLI+A 
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            +A   + A  ++ +M   G+ P E T+T ++  ++   D++ A  +   M + G S   
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
            +  V++HG C +G +++A      M  +    P+   +N ++ G CK G+   A+ ++ 
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            M ++G  P++ +Y+S I  LC+ G+  EA  +L+QM+     P+   YN L
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 37/260 (14%)

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK---- 397
           K    SP    Y +++     +G  D   ++   +KS+       T+ +LI ++++    
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134

Query: 398 -------------------------------AGNS-KMASDLVREMEERGITPSEVTYTI 425
                                           GNS K+      +M   GI P   T+ +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI +  R+  +  A  M   M   G  PD  T+  ++ G   +G++  A ++   M E  
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              ++V  N+++ G+CKEG    AL  + EM N+ G  P+  ++++ +  LC+ G    A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 545 EVLLNQMLKLGLKPSVSLYN 564
             +++ ML+ G  P V  YN
Sbjct: 315 IEIMDVMLQEGYDPDVYTYN 334



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 2/146 (1%)

Query: 426 LIDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           L+DS     D   A  +++L  +K  FSP+   Y  ++  L   G+  +  K+   M  +
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + E     + ++I  Y +       L ++  M +E GL P+   Y+  + +L        
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
            E+   +M   G+KP VS +N+L +A
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKA 198


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 237/497 (47%), Gaps = 41/497 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--- 166
            ++ A+    L D+AL  +H ++      P +   NSLL  ++K    +     + E   
Sbjct: 138 DVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMID 197

Query: 167 --NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N   + +D Y+  I++KG C  G +    +++      G  PN+V Y +LIDG CK G
Sbjct: 198 RDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKG 257

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL----------QKD----------- 263
           ++E A  LF+K+   G + T  T+  L+ G  K G+           KD           
Sbjct: 258 EVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYN 317

Query: 264 ---------GFEFYEK-----MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                    GF+   K     M  N   P L TYN LI+ +C+ G+V E  KL ++   R
Sbjct: 318 NIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRR 377

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +A N +TY  L+ G CK+    +A   L +M  +G+  ++I+Y  LI G   AGE D A
Sbjct: 378 GLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTA 437

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             + +++ + G  P    YNVL+    K G   MA  ++ EM ++ I P    Y  L+D 
Sbjct: 438 LTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDG 497

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F+R  ++++A +++ L+ + G  P V  Y V+I G    G M  A    + M      P+
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              ++ +I GY K+ N    L++ G M ++   PN+ +Y+S I   C+ G+   AE L +
Sbjct: 558 IFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFS 617

Query: 550 QMLKLGLKPSVSLYNIL 566
            M   GLKPSV  Y+IL
Sbjct: 618 MMRSHGLKPSVVTYSIL 634



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 207/422 (49%), Gaps = 1/422 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            Y ++ID + K    + A   F ++   G  P   TF SL+    K   F+   L   E 
Sbjct: 245 FYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEM 304

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + + ++V  +  +I    + G   KA + L ++ E    P++V Y +LI+  C  G++
Sbjct: 305 KDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEV 364

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A+ L  +    GL   + TYT L+ G  K G      ++  +M  +G+   + +Y  L
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH     G+V     + D M +R +  +   YN L+ GL K+ ++  A+ +L +M    I
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+   Y  L+DGF   G  D+A +LF  +   G  P VV YNV+I+ FSK+G    A  
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            + +M      P   T++ +ID +V+  +M    +++ LM K    P+V TY  LI+G C
Sbjct: 545 CIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYC 604

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            KG  K A KLF+ M    L+P+ V Y+++I  +CKE    +A+     M      PN A
Sbjct: 605 RKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDA 664

Query: 527 SY 528
           ++
Sbjct: 665 AF 666



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 230/524 (43%), Gaps = 23/524 (4%)

Query: 71  LKIISGRITSSSFTPRSLLCH-LTQLFPSSSNPVTKSRLYESIIDAH------------- 116
           L++  G +   +  P +  C+ L  L        T  +LY+ +ID               
Sbjct: 153 LEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTS 212

Query: 117 -------LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
                  LK R+ D  +         G  P    +N+L+    K    +  +  F + + 
Sbjct: 213 IMVKGLCLKGRIED-GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKM 271

Query: 170 KVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           K  +  + +FG L+ G C+ G       +L ++++ G S NV +Y ++ID   K G   +
Sbjct: 272 KGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIK 331

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           AK   +++ E        TY  LI      G  ++  +  E+    G++P+  TY  L+H
Sbjct: 332 AKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVH 391

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC +G+ ++      EM    +  ++++Y  LI GL     V  A  + D+M   GI P
Sbjct: 392 GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILP 451

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +   YN L++G    G+   A  +  ++     +P    Y  L+  F + GN   A  L 
Sbjct: 452 DANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLF 511

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           + + E+G+ P  V Y ++I  F +S  M+ A      M+++   PD++T+  +I G   +
Sbjct: 512 QLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQ 571

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            NM    K+F  M +   +PN V Y  +I GYC++G +  A +L   M   GL P++ +Y
Sbjct: 572 HNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTY 631

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           S  IG  C++ K  +A      ML     P+ + ++ L     N
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTN 675



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 196/389 (50%), Gaps = 7/389 (1%)

Query: 187 EAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLF-----RKIGELG 240
           + G ++KA EV + + ++  S P+     SL++   K+  IE A  L+     R  G+  
Sbjct: 145 DVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGD-D 203

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    +T ++++ GL   G  +DG +  E     G  P++  YN LI  YC +G+V   +
Sbjct: 204 ICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAY 263

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           KLF +++ +     + T+ +L+ G CK    +  + LL +MK  G+S NV  YN +ID  
Sbjct: 264 KLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDAR 323

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G   KA     ++  N   P +VTYN LI  F   G  + A  L+ +   RG+ P++
Sbjct: 324 YKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNK 383

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TYT L+  + +  +  KA +    M  SG   D+ +YG LIHGL + G +  A  + + 
Sbjct: 384 LTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    + P+  +YN+++ G  K+G    A  +L EM ++ + P+   Y++ +    + G 
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA+ L   +++ GL P V  YN++ + 
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKG 532



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 219/481 (45%), Gaps = 34/481 (7%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q F S  N   K  ++E+I    L   + D+ L    QM ++ +  R       L F IK
Sbjct: 279 QTFGSLVNGFCKMGMFEAI--DLLLLEMKDRGLSVNVQMYNNIIDARYK-----LGFDIK 331

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           +    K     SEN C  E D+ ++  LI   C  G++ +A ++L Q    G +PN + Y
Sbjct: 332 AKDTLKE---MSENCC--EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTY 386

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T L+ G CK G+  +A     ++   GL     +Y  LI GL   G         ++M  
Sbjct: 387 TPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMN 446

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G+ P    YN L++    +GK+S    +  EM  + +A +   Y TL+ G  +   + E
Sbjct: 447 RGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDE 506

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A++L   +   G+ P V+ YN +I GF  +G  D A    ++++     P + T++ +I 
Sbjct: 507 AKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIID 566

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            + K  N      +   M ++   P+ VTYT LI+ + R  + + A +++S+M+  G  P
Sbjct: 567 GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKP 626

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC--------KEGN 505
            V TY +LI   C +  + +A   F  M   K  PND  ++ ++ G+         +E N
Sbjct: 627 SVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPN 686

Query: 506 SY----RAL------RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +     R++      R++G+    G     A+Y+  +  LCQ      A  L N+ML  G
Sbjct: 687 NLHENSRSMFEDFFSRMIGD----GWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFG 742

Query: 556 L 556
           L
Sbjct: 743 L 743



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 217/473 (45%), Gaps = 17/473 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+        ++A     Q +  G+ P   T+  L+    K   + K   +  E +
Sbjct: 351 YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMS 410

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E+D+ S+G LI G   AG+++ A  + +++   G  P+  IY  L++G  K G + 
Sbjct: 411 TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLS 470

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK++  ++ +  +      Y  L+ G  ++G   +  + ++ +   G+ P +  YN +I
Sbjct: 471 MAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMI 530

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +   G +       D+MR      ++ T++T+I G  K+  +    ++   M      
Sbjct: 531 KGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCK 590

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  LI+G+C  GET  A +LF+ ++S+G  PSVVTY++LI +F K      A   
Sbjct: 591 PNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSY 650

Query: 408 VREMEERGITPSEVTYTILIDSFVRS-------------DDMEKAFE-MYSLMQKSGFSP 453
              M     TP++  +  L++ F  +             ++    FE  +S M   G++ 
Sbjct: 651 FELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQ 710

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
               Y  ++  LC +  +K A +L N M    L  + V +  +I G C EGNS     ++
Sbjct: 711 KAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMI 770

Query: 514 G-EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             ++NE G +     YS  +     +G   EA  +L  M+K  + P+  L N+
Sbjct: 771 SCDLNE-GELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNL 822


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 220/403 (54%), Gaps = 3/403 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  ++  +I G C+ G +  A  VL      GF P+   Y SLI+G CK+GD +RA  
Sbjct: 292 EPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMA 351

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F+     GL  +   Y  LI GL + GL     +   +M  NG  P+++TYN +I+  C
Sbjct: 352 VFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLC 411

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G VS+   L D+   +    ++ TYNTLI G CK++++  A  ++++M   G++P+VI
Sbjct: 412 KMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVI 471

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L++G C AG++++   +F  ++  G +P+++TYN+++ +  KA     A DL+ EM
Sbjct: 472 TYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEM 531

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGN 470
           + +G+ P  V++  L   F +  D++ A++++  M+K         TY +++     + N
Sbjct: 532 KSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLN 591

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M  A KLF+ M  +  +P++  Y ++I G+CK GN  +  + L E  EK  +P++ ++  
Sbjct: 592 MNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGR 651

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            +  LC   K  EA  +++ ML+ G+ P     N ++ A   +
Sbjct: 652 VLNCLCVKDKVHEAVGIIHLMLQKGIVPET--VNTIFEADKKV 692



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 264/592 (44%), Gaps = 73/592 (12%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           PLKA  +FN A S  G +HT  +   I++    K+  H        +L            
Sbjct: 20  PLKALEMFNSAKSEDGFKHTASTYKCIVQ----KLGHHGEFEEMEKLL------------ 63

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                    +++  + +N + +    E++ +   K ++  +A+  F +M      P  ++
Sbjct: 64  ---------SEMRENVNNALLEGAYIEAMKNYGRKGKVQ-EAVDTFERMDFYNCDPSVHS 113

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
            N+++  +++    ++    +   R + V+ DVY++ I IK  C+      A  +L  + 
Sbjct: 114 HNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP 173

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           E+G   N V Y +++ G   +G+ + A+ LF ++    L      +  L+  L K GL  
Sbjct: 174 ELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVF 233

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG---------KVSEGFKLFDEMRHREVAC 313
           +      K+   GV P+L+T+N  +   C EG         +V E  +   +M +     
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEP 293

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           + +TYN++I G CK+  VQ+A R+L      G  P+  TY  LI+GFC  G+ D+A  +F
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF 353

Query: 374 -----------------------------------NQLKSNGQSPSVVTYNVLIRAFSKA 398
                                              N++  NG  P++ TYN++I    K 
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    AS LV +   +G  P   TY  LID + +   ++ A EM + M   G +PDV TY
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L++GLC  G  +E  ++F +M E    PN + YN+++   CK      A+ LLGEM  
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK-LGLKPSVSLYNILYRA 569
           KGL P++ S+ +     C+ G    A  L  +M K   +  + + YNI+  A
Sbjct: 534 KGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSA 585



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 169/376 (44%), Gaps = 7/376 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSE 166
           LY ++I    +  L   AL   ++M ++G  P   T+N ++  + K  C  D   L    
Sbjct: 367 LYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDA 426

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                  D++++  LI G C+   L+ A E++N++   G +P+V+ Y +L++G CK G  
Sbjct: 427 IAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKS 486

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E    +F+ + E G      TY +++  L K     +  +   +M+  G+ P + ++  L
Sbjct: 487 EEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN-VVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
              +C  G +   ++LF  M  +   C+   TYN ++    +++ +  A +L   MK +G
Sbjct: 547 FTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY  +IDGFC  G   + ++   +       PS+ T+  ++           A 
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            ++  M ++GI P  V      D  V +        +  L++K   +   YTY +L  G+
Sbjct: 667 GIIHLMLQKGIVPETVNTIFEADKKVVA---APKILVEDLLKKGHIA--YYTYELLYDGI 721

Query: 466 CMKGNMKEASKLFNSM 481
             K  +K+     NS+
Sbjct: 722 RDKKILKKRLPTVNSL 737


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 224/475 (47%), Gaps = 42/475 (8%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCC 186
           QM   GV P   T N   I +   C  ++    FS     ++L    D  +F  LI+G C
Sbjct: 81  QMDSFGVPPNVYTLN---ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 137

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G + +A  + +++ + GF PNVV Y +LI+G CK G+   A  L R + +        
Sbjct: 138 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 197

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN-------------- 292
            YT +I  L K+    + F  + +M   G+SP ++TY  L+H  CN              
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 257

Query: 293 ---------------------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
                                EGKV+E  ++ D M  R V  +VVTY TL+ G C +  +
Sbjct: 258 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA ++ D M   G +P+VI+Y  LI+G+C   + DKA  LF ++      P   TYN L
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +      G  + A  L  EM  RG  P  VTY+IL+DS  ++  +E+A  +   ++ S  
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           +PD+  Y ++I G+C  G ++ A  LF+++    L P+   YN+MI G CK G    A +
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L  EM+     P+  +Y++      Q+ +   A  LL +ML  G    VS   +L
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLL 552



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 190/392 (48%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  F  L+    +    +    +  Q++  G  PNV     LI+  C    +  A  +  
Sbjct: 56  IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 115

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LG      T+T LI GL   G   +    ++KM   G  P++ TY  LI+  C  G
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
             S   +L   M       +VV Y ++I  LCK+ +V EA  L  QM   GISP++ TY 
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 235

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+   C+  E      L NQ+ ++   P VV ++ ++ A  K G    A ++V  M +R
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  VTYT L+D      +M++A +++ +M + GF+PDV +Y  LI+G C    + +A
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 355

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M   +  P+   YN ++ G C  G    A+ L  EM  +G +P++ +YS  +  
Sbjct: 356 MYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC++    EA  LL  +    L P + +YNI+
Sbjct: 416 LCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 181/379 (47%), Gaps = 6/379 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A    N+L  M   P++V +  L+    K         L  ++   G+    +T  +
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           LI   C L + G     F    K+   G  P   T+  LI   C EGK+ E   LFD+M 
Sbjct: 97  LINSFCHLNRVGF---AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 NVVTY TLI GLCK      A RLL  M+     P+V+ Y  +ID  C   +  
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +AF LF+Q+   G SP + TY  L+ A       K  + L+ +M    I P  V ++ ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   + +A E+  +M + G  PDV TY  L+ G C++  M EA K+F+ M      
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + Y  +I GYCK     +A+ L  EM  K  +P+  +Y++ +  LC  G+  +A  L
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++M+  G  P +  Y+IL
Sbjct: 394 FHEMVARGQMPDLVTYSIL 412



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 109/207 (52%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN+L      PS+V +  L+ + +K  +      L  +M+  G+ P+  T  IL
Sbjct: 38  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 97

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF   + +  AF + + + K G  PD  T+  LI GLC++G + EA  LF+ M +   
Sbjct: 98  INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 157

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK GN+  A+RLL  M +    P++  Y+S I  LC+D +  EA  
Sbjct: 158 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 217

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L +QM+  G+ P +  Y  L  A  N+
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNL 244



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++ + KL+              L  Q+ S G  P+V T N+LI +F        A  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + ++ + G  P   T+T LI        + +A  ++  M   GF P+V TYG LI+GLC 
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN   A +L  SM +   +P+ V+Y  +I   CK+     A  L  +M  +G+ P+I +
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+S +  LC   +W     LLNQM+   + P V +++ +  A
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 1/155 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++D+  K+   ++A+     +  S + P    +N ++  + ++   +     FS   
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +   V+++ I+I G C+ G LN+A ++  +++    SP+   Y ++  G  +N +  
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           RA  L  ++   G  A   T T+L+  L  +GL +
Sbjct: 529 RAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQ 563


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 252/530 (47%), Gaps = 47/530 (8%)

Query: 84   TPRSLLCHLTQLFPSSSN---------PVTKS--RLYESIIDAHLKSRLSDQALFYFHQM 132
            + +S+L HL Q+   S +         P+  S   +++ +I  +LK  + D A+  F  +
Sbjct: 881  SAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELV 940

Query: 133  LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDL 191
               G +P   T N +L  ++K    +  W  F E   K +  +V +F ILI G C  G+L
Sbjct: 941  GLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNL 1000

Query: 192  NKAFEVLNQLEEMGFSPNVVIYTSL----------------------------------- 216
             KA  +L Q+EE GF P +V Y +L                                   
Sbjct: 1001 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVF 1060

Query: 217  IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            ID  C N    +A +L +K+ +  +   + TY  LI G  K G      + + +M    +
Sbjct: 1061 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 277  SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            SP+  TYN LI  +C+ G   E  +L D M    +  N VTY TL+ GLCK  + + A+R
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 337  LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            LL++M++  +    I Y  LIDG C  G  D+A +L   +  +G +P V+TY+ LI  F 
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 397  KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
            + GN K A +++  M   G+  +++ Y+ LI +F +  ++ +A ++Y++M  +G   D +
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300

Query: 457  TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            T  VL+  LC  G + EA K    M    L PN + Y+ +I GY   G+   A     +M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360

Query: 517  NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + G  P+  +Y S +  LC+ G   EA+  LN++  +       +YN L
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL 1410



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 272/553 (49%), Gaps = 18/553 (3%)

Query: 34   WASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF-----TPRSL 88
            W + Q      +S SI   L + +  S +H A     L+ + GR+           P   
Sbjct: 800  WNTTQTSGSDVES-SIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLE 858

Query: 89   LCHLTQLFPSSSNPVTKSRLYESI--IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L HLT ++  +++ + K+R+Y+S   I  HL  ++   +   F  ++D+   P  N+  S
Sbjct: 859  LKHLTHMYCLTAHILVKARMYDSAKSILRHL-CQMGIGSKSIFGALMDT--YPLCNSIPS 915

Query: 147  LLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            +   +I+     +G + ++    ++      +  VY+  +++    +       + +  +
Sbjct: 916  VFDLLIR-VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974

Query: 201  LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            + + G  PNV  +  LI+G C  G++++A  L +++ E G V T  TY  L+    K G 
Sbjct: 975  MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034

Query: 261  QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             K   E  + M   G+   + TYN  I   C   + ++ + L  +MR   ++ N VTYNT
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094

Query: 321  LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
            LI G  KE ++  A ++ ++M    +SPN +TYN LI G C  G+ ++A RL + +++ G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154

Query: 381  QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
               + VTY  L+    K    ++A  L+  M    +    + YT+LID   ++  +++A 
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214

Query: 441  EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++   M K G +PDV TY  LI+G C  GN+K A ++   M+ + L  N ++Y+ +I+ +
Sbjct: 1215 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274

Query: 501  CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            C+ GN   A+++   MN  G   +  + +  +  LC+DGK  EAE  L  M ++GL P+ 
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334

Query: 561  SLYNILYRAKNNI 573
              Y+ +     +I
Sbjct: 1335 ITYDCIINGYGSI 1347



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 216/469 (46%), Gaps = 10/469 (2%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----IFVIKSCSFDKGWLF 163
            Y  +ID   K+ + D+A+     M   GV P   T++SL+     +  IKS       + 
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAK----EII 1252

Query: 164  FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                R  + L+   +  LI   C+ G++ +A +V   +   G   +      L+   C++
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G +  A+     +  +GLV    TY  +I G    G   + F F++ M   G  PS +TY
Sbjct: 1313 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 1372

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              L+   C  G + E  K  + + +   A + V YNTL+   CK   + EA  L D+M  
Sbjct: 1373 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 1432

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSK 402
              + P+  TY+ L+ G C  G+   A  LF      G   P+ V Y  L+   SKAG+ K
Sbjct: 1433 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 1492

Query: 403  MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
             A     EM ++G  P  V +  +IDS  R   M KA + +S M+  G  P++ TY +L+
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 1552

Query: 463  HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            HG   K  +     L+++M    + P+ + ++ +I G  K G     ++LLG+M  +G +
Sbjct: 1553 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 1612

Query: 523  PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
             +  +++  I    + GK  +A  L+N M  LG+ P    YN ++   N
Sbjct: 1613 ADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 1661



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 219/541 (40%), Gaps = 77/541 (14%)

Query: 88   LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
             LCH++++       V  S  Y+ II+ +        A  +F  M+  G  P   T+ SL
Sbjct: 1321 FLCHMSRI-----GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 1375

Query: 148  LIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            L  + K  +  +   F +  +     +D   +  L+   C++G+L++A  + +++ +   
Sbjct: 1376 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 1435

Query: 207  SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT-YTVLICGLFKNGLQKDGF 265
             P+   Y+SL+ G C+ G    A  LF      G +   H  YT L+ GL K G  K  F
Sbjct: 1436 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 1495

Query: 266  EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             F+E+M   G  P    +N +I      G++ +    F  MR   V  N+ TYN L+ G 
Sbjct: 1496 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
             K+  +     L   M   GI P+ +T++ LI G   +G  D   +L  ++   G     
Sbjct: 1556 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 1615

Query: 386  VTYNVLIRAFSKAGNSKMASDLV-----------------------------------RE 410
             T+N+LI  +S++G  + A DLV                                    E
Sbjct: 1616 FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 1675

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS------------------ 452
            M E G+ P    Y  LI+   R  D++ AF++   M+  GF                   
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735

Query: 453  -----------------PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                             P + T+  L+H  C    + EA KL   M    L+ + V YN+
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1795

Query: 496  MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            +I G C  G+S  A  L  EM  + L PNI +Y+  +  +       + E LL  + + G
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855

Query: 556  L 556
            L
Sbjct: 1856 L 1856



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 216/497 (43%), Gaps = 48/497 (9%)

Query: 40   LQHTPQSISIIL--RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ--- 94
            L + P ++  ++   LL     S +   A  L  K++   +   S+T  SLL  L +   
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454

Query: 95   ------LFPSSSNPVT---KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                  LF ++    T      +Y  ++D   K+     A ++F +M+  G  P +  FN
Sbjct: 1455 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 1514

Query: 146  SLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
            +    +I SCS                                G + KA +  + +   G
Sbjct: 1515 A----IIDSCS------------------------------RRGQMMKANDFFSTMRWWG 1540

Query: 206  FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
              PN+  Y  L+ G  K   + R   L+  +   G+   + T+  LI GL K+G+   G 
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600

Query: 266  EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
            +   KM + G     +T+N LI++Y   GK+ + F L + M    V  +  TYN +  GL
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
             K+   +E+  +L +M   G+ P    Y  LI+G C  G+   AF+L +++++ G     
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 1720

Query: 386  VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            V  + ++R     G ++ A  ++  M    + P+  T+T L+  F R   + +A ++  +
Sbjct: 1721 VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1780

Query: 446  MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            M+  G   DV  Y VLI G+C  G+   A +L+  M    L PN   Y +++       N
Sbjct: 1781 MELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANN 1840

Query: 506  SYRALRLLGEMNEKGLV 522
              +  +LL ++ E+GL+
Sbjct: 1841 LIQGEKLLTDLQERGLI 1857



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 122  SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGI 180
            ++ A+     ML   + P   TF +L+    +     +   L      C ++LDV ++ +
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1795

Query: 181  LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            LI G C  GD   AFE+  ++      PN+  Y  L+D      ++ + + L   + E G
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855

Query: 241  LV----ATQH 246
            L+    +TQH
Sbjct: 1856 LISWGGSTQH 1865


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 257/541 (47%), Gaps = 50/541 (9%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSN---------PVTKS--RLYESIIDAHLKSRL 121
           ++  R+  S+   +S+L HL Q+   S +         P+  S   +++ +I  +LK  +
Sbjct: 122 LVKARMYDSA---KSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGM 178

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
            D A+  F  +   G +P   T N +L  ++K    +  W  F E   K +  +V +F I
Sbjct: 179 IDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 238

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL------------------------ 216
           LI G C  G+L KA  +L Q+EE GF P +V Y +L                        
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 217 -----------IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
                      ID  C N    +A +L +K+ +  +   + TY  LI G  K G      
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           + + +M    +SP+  TYN LI  +C+ G   E  +L D M    +  N VTY TL+ GL
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CK  + + A+RLL++M++  +    I Y  LIDG C  G  D+A +L   +  +G +P V
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           +TY+ LI  F + GN K A +++  M   G+  +++ Y+ LI +F +  ++ +A ++Y++
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M  +G   D +T  VL+  LC  G + EA K    M    L PN + Y+ +I GY   G+
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A     +M + G  P+  +Y S +  LC+ G   EA+  LN++  +       +YN 
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 658

Query: 566 L 566
           L
Sbjct: 659 L 659



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 272/553 (49%), Gaps = 18/553 (3%)

Query: 34  WASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT-----PRSL 88
           W + Q      +S SI   L + +  S +H A     L+ + GR+           P   
Sbjct: 49  WNTTQTSGSDVES-SIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLE 107

Query: 89  LCHLTQLFPSSSNPVTKSRLYESI--IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           L HLT ++  +++ + K+R+Y+S   I  HL  ++   +   F  ++D+   P  N+  S
Sbjct: 108 LKHLTHMYCLTAHILVKARMYDSAKSILRHL-CQMGIGSKSIFGALMDT--YPLCNSIPS 164

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           +   +I+     +G + ++    ++      +  VY+  +++    +       + +  +
Sbjct: 165 VFDLLIR-VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + + G  PNV  +  LI+G C  G++++A  L +++ E G V T  TY  L+    K G 
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            K   E  + M   G+   + TYN  I   C   + ++ + L  +MR   ++ N VTYNT
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI G  KE ++  A ++ ++M    +SPN +TYN LI G C  G+ ++A RL + +++ G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
              + VTY  L+    K    ++A  L+  M    +    + YT+LID   ++  +++A 
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           ++   M K G +PDV TY  LI+G C  GN+K A ++   M+ + L  N ++Y+ +I+ +
Sbjct: 464 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ GN   A+++   MN  G   +  + +  +  LC+DGK  EAE  L  M ++GL P+ 
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 583

Query: 561 SLYNILYRAKNNI 573
             Y+ +     +I
Sbjct: 584 ITYDCIINGYGSI 596



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 216/469 (46%), Gaps = 10/469 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----IFVIKSCSFDKGWLF 163
           Y  +ID   K+ + D+A+     M   GV P   T++SL+     +  IKS       + 
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAK----EII 501

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               R  + L+   +  LI   C+ G++ +A +V   +   G   +      L+   C++
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A+     +  +GLV    TY  +I G    G   + F F++ M   G  PS +TY
Sbjct: 562 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 621

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             L+   C  G + E  K  + + +   A + V YNTL+   CK   + EA  L D+M  
Sbjct: 622 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 681

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSK 402
             + P+  TY+ L+ G C  G+   A  LF      G   P+ V Y  L+   SKAG+ K
Sbjct: 682 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 741

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A     EM ++G  P  V +  +IDS  R   M KA + +S M+  G  P++ TY +L+
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HG   K  +     L+++M    + P+ + ++ +I G  K G     ++LLG+M  +G +
Sbjct: 802 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 861

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
            +  +++  I    + GK  +A  L+N M  LG+ P    YN ++   N
Sbjct: 862 ADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 910



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 219/541 (40%), Gaps = 77/541 (14%)

Query: 88   LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
             LCH++++       V  S  Y+ II+ +        A  +F  M+  G  P   T+ SL
Sbjct: 570  FLCHMSRI-----GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 624

Query: 148  LIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            L  + K  +  +   F +  +     +D   +  L+   C++G+L++A  + +++ +   
Sbjct: 625  LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 684

Query: 207  SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT-YTVLICGLFKNGLQKDGF 265
             P+   Y+SL+ G C+ G    A  LF      G +   H  YT L+ GL K G  K  F
Sbjct: 685  LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744

Query: 266  EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             F+E+M   G  P    +N +I      G++ +    F  MR   V  N+ TYN L+ G 
Sbjct: 745  YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 804

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
             K+  +     L   M   GI P+ +T++ LI G   +G  D   +L  ++   G     
Sbjct: 805  SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 864

Query: 386  VTYNVLIRAFSKAGNSKMASDLV-----------------------------------RE 410
             T+N+LI  +S++G  + A DLV                                    E
Sbjct: 865  FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS------------------ 452
            M E G+ P    Y  LI+   R  D++ AF++   M+  GF                   
Sbjct: 925  MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 453  -----------------PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                             P + T+  L+H  C    + EA KL   M    L+ + V YN+
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044

Query: 496  MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            +I G C  G+S  A  L  EM  + L PNI +Y+  +  +       + E LL  + + G
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104

Query: 556  L 556
            L
Sbjct: 1105 L 1105



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 216/497 (43%), Gaps = 48/497 (9%)

Query: 40   LQHTPQSISIIL--RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ--- 94
            L + P ++  ++   LL     S +   A  L  K++   +   S+T  SLL  L +   
Sbjct: 644  LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703

Query: 95   ------LFPSSSNPVT---KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                  LF ++    T      +Y  ++D   K+     A ++F +M+  G  P +  FN
Sbjct: 704  AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 763

Query: 146  SLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
            +    +I SCS                                G + KA +  + +   G
Sbjct: 764  A----IIDSCS------------------------------RRGQMMKANDFFSTMRWWG 789

Query: 206  FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
              PN+  Y  L+ G  K   + R   L+  +   G+   + T+  LI GL K+G+   G 
Sbjct: 790  VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849

Query: 266  EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
            +   KM + G     +T+N LI++Y   GK+ + F L + M    V  +  TYN +  GL
Sbjct: 850  KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
             K+   +E+  +L +M   G+ P    Y  LI+G C  G+   AF+L +++++ G     
Sbjct: 910  NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 969

Query: 386  VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            V  + ++R     G ++ A  ++  M    + P+  T+T L+  F R   + +A ++  +
Sbjct: 970  VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1029

Query: 446  MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            M+  G   DV  Y VLI G+C  G+   A +L+  M    L PN   Y +++       N
Sbjct: 1030 MELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANN 1089

Query: 506  SYRALRLLGEMNEKGLV 522
              +  +LL ++ E+GL+
Sbjct: 1090 LIQGEKLLTDLQERGLI 1106



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 122  SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGI 180
            ++ A+     ML   + P   TF +L+    +     +   L      C ++LDV ++ +
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044

Query: 181  LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
            LI G C  GD   AFE+  ++      PN+  Y  L+D      ++ + + L   + E G
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104

Query: 241  LV----ATQH 246
            L+    +TQH
Sbjct: 1105 LISWGGSTQH 1114


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 282/581 (48%), Gaps = 48/581 (8%)

Query: 27  KAFSLFNWASRQGLQHTP--QSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           +AF LF  +SR  +  +   QS S ++ +L     +H +  A+ LI  +I  R+   S  
Sbjct: 56  EAFKLFETSSRSRVSKSNDLQSFSAVIHVL---TGAHKYTLARCLIKSLIE-RLKRHS-E 110

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
           P ++   L        +P     ++  +I   L+  L ++AL+   +M  S   P S   
Sbjct: 111 PSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKAC 167

Query: 145 NSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
            S+L  +++   FD  W+ +    +R  V  DV+ + +L + C + G  +K  ++L+++ 
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVP-DVHIYFVLFQCCFKQGLYSKKEKLLDEMT 226

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            +G  PNV IYT  I   C++  +E A+ +F  + + G++   +TY+ +I G  K G  +
Sbjct: 227 SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286

Query: 263 DGFEFYEKMQLN-----------------------------------GVSPSLYTYNCLI 287
             +  Y+++ +                                    GV P+LY YNCLI
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +C  G + E   L  EM    ++ +V TY  LI GLC E +V EA RL  +MK   I 
Sbjct: 347 HGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TYN LI G+C     ++A  L +++ ++G  P+++T++ LI  +    + K A  L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +GI P  VTYT LID+  +  +M++A  +YS M ++G  P+ +T+  L+ G   
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G +  A   +    + +   N V +  +I G C+ G   RA R   +M   G+ P+I S
Sbjct: 527 EGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICS 586

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y S +    Q+ +  +  +L   M+K G+ P++ +  +L R
Sbjct: 587 YVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 158/302 (52%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           Y+ M   G+ P ++ Y  L      +G  S+  KL DEM    +  NV  Y   I  LC+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           + +++EAE++ + MK  G+ PN+ TY+ +IDG+C  G   +A+ L+ ++      P+VV 
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           +  L+  F KA     A  L   M + G+ P+   Y  LI    +S +M +A  + S M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
               SPDV+TY +LI+GLC++  + EA++LF  M   ++ P+   YN +I GYCKE N  
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +AL L  EM   G+ PNI ++S+ I   C       A  L  +M   G+ P V  Y  L 
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486

Query: 568 RA 569
            A
Sbjct: 487 DA 488



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 185/380 (48%), Gaps = 3/380 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F  M   GV P   T+++++    K+ +  + +  + E      L +V  FG L+ G C+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           A +L  A  +   + + G  PN+ +Y  LI G CK+G++  A  L  ++  L L     T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT+LI GL       +    ++KM+   + PS  TYN LIH YC E  + +   L  EM 
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N++T++TLI G C    ++ A  L  +M + GI P+V+TY  LID         
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A RL++ +   G  P+  T+  L+  F K G   +A D  +E  ++    + V +T LI
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   ++  + +A   +S M+  G +PD+ +Y  ++ G   +  + +   L   M +T + 
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616

Query: 488 PNDVVYNMMIFGYCKEGNSY 507
           PN +V  ++   Y  + N Y
Sbjct: 617 PNLLVNQLLARFY--QANGY 634



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 1/373 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++ID + K+    QA   + ++L + + P    F +L+    K+        LF    
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V+ ++Y +  LI G C++G++ +A  +L+++E +  SP+V  YT LI+G C    + 
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF+K+    +  +  TY  LI G  K    +   +   +M  +GV P++ T++ LI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YCN   +     L+ EM  + +  +VVTY  LI    KE  ++EA RL   M  AGI 
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  T+  L+DGF   G    A   + +        + V +  LI    + G    AS  
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M   GITP   +Y  ++   ++   +     +   M K+G  P++    +L      
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQA 631

Query: 468 KGNMKEASKLFNS 480
            G +K A  L NS
Sbjct: 632 NGYVKSACFLTNS 644



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 136/268 (50%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R +  +V  Y  L     K+    + E+LLD+M   GI PNV  Y   I   C   +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            ++A ++F  +K +G  P++ TY+ +I  + K GN + A  L +E+    + P+ V +  
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+D F ++ ++  A  ++  M K G  P++Y Y  LIHG C  GNM EA  L + M    
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   Y ++I G C E     A RL  +M  + + P+ A+Y+S I   C++    +A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            L ++M   G++P++  ++ L     N+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNV 457



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 6/337 (1%)

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           T RSL  H+ + F    N      +Y  +I  H KS    +A+    +M    + P   T
Sbjct: 322 TARSLFVHMVK-FGVDPNLY----VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376

Query: 144 FNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +  L+    I+    +   LF      ++     ++  LI G C+  ++ +A ++ +++ 
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  PN++ +++LIDG C   DI+ A  L+ ++   G+V    TYT LI   FK    K
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +    Y  M   G+ P+ +T+ CL+  +  EG++S     + E   +    N V +  LI
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLC+   +  A R    M+  GI+P++ +Y  ++ G            L   +   G  
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           P+++   +L R +   G  K A  L      + ++ S
Sbjct: 617 PNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSNS 653


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 231/463 (49%), Gaps = 4/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + S++    K R   +A     +M  +G  P   T+ S+L   +  C    G +   E  
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTY-SILFDGLLRCDDGNGAMELYEQA 342

Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  + ++ Y+  IL+ G C+ G + KA E+L +  E G   + VIY + ++G C+ GD+
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A +   ++   GL     T+  LI             E+ +KM   GV+PS+ TYN L
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y         F++ ++M    V  NVV+Y +LI  LCK+ ++ EAE +L  M   G+
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN   YN LIDG C  G+   A R F+++  +  SP++VTYNVLI    K G    A D
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            + ++   G +P  +TY  LI  +  + ++ K   +Y  M+  G  P V TY  LI G C
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-C 641

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            K  ++   KL+N M +  L P+ VVYN MI  Y + GN+ +A  L   M ++G+ P+  
Sbjct: 642 SKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+S I    ++GK    + L+N M    L P    Y+IL + 
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 233/465 (50%), Gaps = 3/465 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           T + +Y   I A +K +     + +   M   GVRP    +N L+  + +          
Sbjct: 174 TDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKM 233

Query: 164 FSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           F E  C + L   + ++  LI G C+ G+L+ AF++  +++E   +PN++ + SL+ G C
Sbjct: 234 FDE-MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLC 292

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K   ++ A+ L +++   G +   +TY++L  GL +        E YE+    G+  + Y
Sbjct: 293 KMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNY 352

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T + L++  C +GKV +  ++  +     +  + V YNT + G C+   + +A   +++M
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM 412

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G+ PN IT+N LID FCD  E DKA     ++   G +PSV TYN LI  + K    
Sbjct: 413 ESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTF 472

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
                ++ +MEE G+ P+ V+Y  LI+   +   + +A  +   M   G  P+   Y +L
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G CM G +K+A + F+ M  +++ P  V YN++I G CK+G    A   L ++   G 
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P++ +Y+S I      G   +   L   M  LG+KP+V  Y+ L
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPL 637



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 224/461 (48%), Gaps = 6/461 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FS 165
           Y  + D  L+    + A+  + Q  + G+R  + T + LL  + K    +K       F+
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           EN    +  +Y+    + G C  GD+NKA   + ++E  G  PN + + SLID  C   +
Sbjct: 379 ENGLVADEVIYN--TFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +++A+   +K+ E G+  +  TY  LI G  K       F+  E+M+  GV P++ +Y  
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+  C +GK+ E   +  +M  R V  N   YN LI G C   +V++A R  D+M  + 
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ISP ++TYN LIDG C  G+  +A     Q+ S+G SP V+TYN LI  ++ AGN     
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   M+  GI P+  TY  LI S    + +E   ++Y+ M +    PD   Y  +IH  
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLI-SGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCY 675

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              GN ++A  L   M +  + P+ + YN +I G+ +EG       L+  M  K L P  
Sbjct: 676 AEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKA 735

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y   +   C    +  A V   +M++    P+ S+ N L
Sbjct: 736 DTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNEL 776



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 263/573 (45%), Gaps = 49/573 (8%)

Query: 30  SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
           +L N +S+   Q   + ++ +  LL    +  +++ A++LIL       T S+F+  S  
Sbjct: 43  TLSNNSSKD--QERYEQVNKLQILLQQNCNEAAYSLAKSLIL-------TKSTFSSPS-- 91

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
             L   F + S P+ +  L + ++    KS++  +A+  +  M   G  P   + + L  
Sbjct: 92  -DLFSCFSACSIPL-RITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFS 149

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            ++    F K   LF          D + +   I+   +  +L    E L+ + + G  P
Sbjct: 150 CLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRP 209

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           NV IY  LI G C+   I  A+ +F ++  + LV +  TY  LI G  K G     F+  
Sbjct: 210 NVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMR 269

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR--------------------- 307
           E+M+   V+P++ T+N L+   C   K+ E   L  EM                      
Sbjct: 270 ERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRC 329

Query: 308 --------------HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                          + +  N  T + L+ GLCK+ +V++AE +L +    G+  + + Y
Sbjct: 330 DDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIY 389

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N  ++G+C  G+ +KA     +++S G  P+ +T+N LI  F        A + V++M E
Sbjct: 390 NTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE 449

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+TPS  TY  LID + +    ++ F++   M++ G  P+V +YG LI+ LC  G + E
Sbjct: 450 KGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE 509

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +   M    + PN  VYNM+I G C  G    ALR   EM    + P + +Y+  I 
Sbjct: 510 AEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLID 569

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+ GK  EAE  L Q+   G  P V  YN L
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 217/450 (48%), Gaps = 37/450 (8%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    +Y + ++ + +    ++A+    +M   G+RP S TFNSL+         DK   
Sbjct: 383 VADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEE 442

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +   K V   V ++  LI G  +    ++ F++L Q+EE+G  PNVV Y SLI+  C
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K+G I  A+++ R                +IC                     GV P+  
Sbjct: 503 KDGKILEAEIVLRD---------------MIC--------------------RGVLPNAQ 527

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            YN LI   C  GKV +  + FDEM   E++  +VTYN LI GLCK+ ++ EAE  L Q+
Sbjct: 528 VYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQI 587

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G SP+VITYN LI G+ +AG   K   L+  +K+ G  P+V TY+ LI   SK G  
Sbjct: 588 TSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-I 646

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           ++   L  EM +  + P  V Y  +I  +    + +KA+ ++  M   G  PD  TY  L
Sbjct: 647 ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL 706

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G   +G +     L N+M   +L P    Y++++ G+C   +   A     EM E   
Sbjct: 707 ILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNF 766

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +PN +  +     L Q+G+  E +V+ ++M
Sbjct: 767 LPNASICNELTAGLEQEGRLQEVQVICSEM 796



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 217/481 (45%), Gaps = 26/481 (5%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLL------------LSKMSSHSHAAAQTLILKIIS 75
           A  L+  A+ +G++    + SI+L  L            L K + +   A + +    ++
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           G           L     + F    N +T    + S+ID     +  D+A  +  +M + 
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSIT----FNSLIDKFCDMKEMDKAEEWVKKMAEK 450

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           GV P   T+N+L+    K C+FD+ +    +     V+ +V S+G LI   C+ G + +A
Sbjct: 451 GVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA 510

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             VL  +   G  PN  +Y  LIDG C  G ++ A   F ++    +  T  TY VLI G
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K G   +  +F  ++  +G SP + TYN LI  Y N G VS+   L++ M++  +   
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V TY+ LI G  KE  ++  E+L ++M    + P+ + YN +I  + + G T KA+ L  
Sbjct: 631 VRTYHPLISGCSKE-GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            +   G  P  +TYN LI    + G      DLV  M+ + + P   TY IL+       
Sbjct: 690 GMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLK 749

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM--------WETKL 486
           D   A+  Y  M ++ F P+      L  GL  +G ++E   + + M        W +K 
Sbjct: 750 DFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKE 809

Query: 487 E 487
           E
Sbjct: 810 E 810



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 84/162 (51%)

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           DL  E+E  G       Y   I + V+  +++   E    M+K G  P+V+ Y VLI GL
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +  +++A K+F+ M    L  + V YN +I GYCK G    A ++   M EK + PNI
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            +++S +  LC+  K  EA  LL +M   G  P    Y+IL+
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILF 323


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 229/485 (47%), Gaps = 64/485 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +ID   K+   + A   F ++L SGV P +  + SL+  +  + SFD     F++ N
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R        ++ ++I   C+ G L +A +++ ++ E G  P+VV Y +++DG CK+  +E
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 445

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +LF ++  LG    + ++  +I GL +                             I
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSK--------------------------I 479

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
            + C  GK+ E F+L   M       +VVTY+TLI GLC   RV +A  LL+ M      
Sbjct: 480 DQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 539

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P V+T N LI G C AG   +A  + + + S+GQSP VVTYN L+    +AG ++ A +L
Sbjct: 540 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M  RG+ P+ VTYT L+    +++ + +A  +++ M+ SG +P+++TY  LI G C 
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 659

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK-------- 519
            G +    KLF  M    + P+ VVY  +    CK G S RAL +L E  E         
Sbjct: 660 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 719

Query: 520 -----------------------------GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
                                        G +P     +S +  LC+ G+  EA  +L +
Sbjct: 720 EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 779

Query: 551 MLKLG 555
           ++ L 
Sbjct: 780 IMDLA 784



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 252/591 (42%), Gaps = 95/591 (16%)

Query: 69  LILKIISGRITSSSFTPRSLLCHLTQLFPSSSN--------PVTKSRLYESIIDAHLKSR 120
           L++  +  R+    F   S L H   L  S           PV  S  Y  ++ A  K+ 
Sbjct: 100 LVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAA 159

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
             D AL     M +  +   + + +S+L+ ++ S   D+    + EN  + E  + +  +
Sbjct: 160 RVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYREN--RREPCLVTLNV 217

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-C------------------- 220
           L++G C  G ++KA E+L  + +   +P+ V Y +++DG C                   
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPS 277

Query: 221 ---------------------CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
                                C+N  I+ A  +F K+ E  +     +Y +LI GL K G
Sbjct: 278 SSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG 337

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR---------- 309
              D    ++K+  +GV+PS   Y  LIH  C      +  +LF +M  R          
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 397

Query: 310 ------------EVACN-------------VVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
                       E AC+             VVTYNT++ GLCK  RV+EA  L ++M+  
Sbjct: 398 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 457

Query: 345 GISPNVITYNKLIDGFCDA---------GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           G +PN  ++N +I G C           G+ D+AFRL  ++  +G  P VVTY+ LI   
Sbjct: 458 GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                   A  L+ +M +R   P+ VT   LI    ++  +++A E+   M  SG SPDV
Sbjct: 518 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 577

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  L+HG C  G  + A +L + M    L PN V Y  ++ G CK      A  +  +
Sbjct: 578 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 637

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M   G  PN+ +Y++ I   C  G+      L  +M+  G+ P   +Y  L
Sbjct: 638 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 228/510 (44%), Gaps = 58/510 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +ID+  K + ++        M+D G  P S TF ++L  + K+   D+  L   E 
Sbjct: 46  VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105

Query: 168 RCKVELDVYSF-GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R ++    ++    L    C  G + +AF++L    E+    N   Y  ++   CK   +
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAFQLL----EIMPVANSSAYNIVVVALCKAARV 161

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L R + E  +     +   ++ GL  +G   +  + Y +   N   P L T N L
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVL 218

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL--------- 337
           +  +C+ G+V +  +L   M   E A + V+Y T++ GLCK  RV+EA RL         
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSS 278

Query: 338 --------------------------------LDQMKMAGISPNVITYNKLIDGFCDAGE 365
                                            ++M    +SP+  +Y  LIDG   AG+
Sbjct: 279 SSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGK 338

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            + A  LF +L  +G +PS V Y  LI     A +   A +L  +M  RG  PS VTY +
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 398

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +ID+  +   +E+A ++   M + G  PDV TY  ++ GLC    ++EA  LFN M    
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 458

Query: 486 LEPNDVVYNMMIFGYCKE---------GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
             PN   +N +I G C++         G    A RLL  M + G VP++ +YS+ I  LC
Sbjct: 459 CTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 518

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +  +A  LL  M+K   KP+V   N L
Sbjct: 519 SIARVDDARHLLEDMVKRQCKPTVVTQNTL 548



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 184/398 (46%), Gaps = 14/398 (3%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  +I+G C  G   +A ++ + +EE   SP   +Y  LID   K  + E  K + + + 
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLMEEC-HSPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G      T+T ++CGL K G   +     ++M+   + P   T + L HE C  G + 
Sbjct: 72  DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
             F+L + M       N   YN ++  LCK  RV +A  L   M    I     + + ++
Sbjct: 132 RAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVL 187

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G  D+G  D+A +++   + N + P +VT NVL+  F   G    A +L+R M +    
Sbjct: 188 VGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECA 244

Query: 418 PSEVTYTILIDSFVRSDDMEKAF------EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           P EV+Y  ++D   ++  +E+A       E+ S    S   P +  Y ++I GLC    +
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRI 304

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            EA ++F  M E  + P+   Y ++I G  K G    A  L  ++   G+ P+  +Y+S 
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  LC    + +A  L   M + G  PS   YN++  A
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDA 402



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 180/439 (41%), Gaps = 82/439 (18%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNG----------------------------------DIER 228
           + G  P  +++TS+I G C  G                                  + E 
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEA 62

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
            K + + + + G      T+T ++CGL K G   +     ++M+   + P   T + L H
Sbjct: 63  VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAH 122

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
           E C  G +   F+L + M       N   YN ++  LCK  RV +A  L   M    I  
Sbjct: 123 ELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPL 178

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
              + + ++ G  D+G  D+A +++   + N + P +VT NVL+  F   G    A +L+
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 409 REMEERGITPSEVTYTILIDSFVRS----------------------------------- 433
           R M +    P EV+Y  ++D   ++                                   
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295

Query: 434 ------DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                 D +++A +M+  M +   SPD ++YG+LI GL   G + +A  LF  +  + + 
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V Y  +I G C   +   A  L  +MN +G  P+  +Y+  I   C+ G   EA  L
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           + +M++ G  P V  YN +
Sbjct: 416 IKKMIEDGHVPDVVTYNTV 434



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 176/406 (43%), Gaps = 24/406 (5%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRL------------LLSKMSSHSHAAAQTLILKIIS 75
           A  LF   +R+G   +P + ++++              L+ KM    H         ++ 
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY-----ESIIDAHLKSRLSDQALFYFH 130
           G   SS      LL +  +    + N  + + +      +S ID   +    D+A     
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLK 496

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCE 187
           +M D G  P   T+++L+  +      D       +    +CK    V +   LI G C+
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT--VVTQNTLIHGLCK 554

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG + +A EVL+ +   G SP+VV Y +L+ G C+ G  ERA+ L   +   GL     T
Sbjct: 555 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 614

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT L+ GL K     +    + +M+ +G +P+L+TY  LI  +C+ G+V  G KLF EM 
Sbjct: 615 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 674

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP--NVITYNKLIDGFCDAGE 365
              ++ + V Y TL   LCK  R   A  +L + + +  S       Y   +DG  +AG+
Sbjct: 675 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGK 734

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            + A      +   GQ P+      L+    K+G    A  ++ E+
Sbjct: 735 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 205/385 (53%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            L+  ++GILI G C+ G    A +VL Q+E    + NVV+Y+++IDG CK+  +  A  
Sbjct: 155 HLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYG 214

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+ ++    +  T  T++ LI G    G  KD F  + +M +  ++P  YT+N L+   C
Sbjct: 215 LYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALC 274

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK+ E   +   M    V   VVTYNTL+ G C    V +A+ +L  +    ++PN  
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSR 334

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +I+GFC     D+A  LF+++   G +P  VTYN LI    KAG    A +LV EM
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
               I    VTY  LID F ++  ++KA  +   +++ G  P++ TY +LI GLC  G +
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           K A  +F  +       N   YN+MI G CKEG    A  LL +M + G++P+  +Y + 
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  L    +  +A+ LL +M+  G+
Sbjct: 515 IQALFHKDENEKAQKLLREMVIKGV 539



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 185/379 (48%), Gaps = 1/379 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           T   +Y +IID   K +L   A   + +M+   + P   TF+SL+        F   +  
Sbjct: 191 TNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRL 250

Query: 164 FSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F+E   K +  D Y+F IL+   C+ G + +A  V+  + + G  P VV Y +L+DG C 
Sbjct: 251 FNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCL 310

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             ++ +AK +   I  + +     +Y ++I G  K  +  +    + +M   G++P   T
Sbjct: 311 VNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVT 370

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   C  G++   ++L DEM +  +  ++VTYN+LI   CK   V +A  L+ ++K
Sbjct: 371 YNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIK 430

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             GI PN+ TYN LIDG C  G+   A  +F  L   G + +  TYN++I    K G   
Sbjct: 431 EHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFD 490

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+ +ME+ GI P  VTY  +I +    D+ EKA ++   M   G     +     +
Sbjct: 491 EAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTL 550

Query: 463 HGLCMKGNMKEASKLFNSM 481
            G  +   M   S LF+++
Sbjct: 551 VGRTLNLGMNLISLLFSAL 569


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFF 164
           R Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F 
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT-EARKMFD 328

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ LI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +++A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M    +SP    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C   K  +  +L  EM  R +  + + +N++I   CKE RV E+E+L D M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P++ITY+ LIDG+C AG+ D+A +L   + S G  P  VTYN LI  + K    + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L REME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HG
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC      EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 525 IASYS 529
           + +YS
Sbjct: 689 VRTYS 693



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 37/437 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G  + GDL+KA+   +++ + G  PNVV Y+S+I   CK   +++A  + 
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G++    TY  ++ G   +G  K+   F +KM  +GV P + TYN L+   C  
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNT--------------------------------- 320
           G+ +E  K+FD M  R +   + TY T                                 
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 321 --LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LIC   K+ +V +A  +  +M+  G++P+ +TY  +I   C +G  + A R F Q+  
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              SP  + YN LI +         A +L+ EM +RGI    + +  +IDS  +   + +
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           + +++ LM + G  PD+ TY  LI G C+ G M EA+KL  SM    ++P+ V YN +I 
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      AL L  EM   G+ P+I +Y+  +  L Q  +   A+ L   + + G + 
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 559 SVSLYNILYRA--KNNI 573
            +S YNI+     KNN+
Sbjct: 618 ELSTYNIILHGLCKNNL 634



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 242/521 (46%), Gaps = 39/521 (7%)

Query: 91  HLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
            L Q+ P          + Y ++I+   K    D+A   +H+MLD G+ P   T++S++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K+ + DK   +  S  +  V  +  ++  ++ G C +G   +A   L ++   G  P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SL+D  CKNG    A+ +F  + + GL     TY  L+ G    G   +     
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M  NG+ P+ Y ++ LI  Y  +GKV +   +F +MR + +  + VTY T+I  LCK 
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKL-------------------------------- 356
            RV++A R  +QM    +SP  I YN L                                
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 357 ---IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              ID  C  G   ++ +LF+ +   G  P ++TY+ LI  +  AG    A+ L+  M  
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  VTY  LI+ + +   ME A  ++  M+ SG SPD+ TY +++ GL        
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  + E+  +     YN+++ G CK   +  ALR+   +    L     +++  IG
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + G+  EA+ L   +   GL P V  Y+++  A+N IE
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM--AENLIE 701



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 219/435 (50%), Gaps = 38/435 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ ++GIL+  CC AG L+  F  L  + + GF  + + +T ++ G C +     A
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ +LG +    +Y +L+ GL  +   ++  E  + M  +G    P + +Y  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +  EG + + +  + EM  R +  NVVTY+++I  LCK   + +A  +L  M   G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN ++ G+C +G+  +A     ++ S+G  P VVTYN L+    K G    A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 407 LVREMEERGITPSEVTY-----------------------------------TILIDSFV 431
           +   M +RG+ P   TY                                   +ILI ++ 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +++A  ++S M++ G +PD  TYG +I  LC  G +++A + F  M + +L P ++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN +I   C      +A  L+ EM ++G+  +   ++S I   C++G+  E+E L + M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 552 LKLGLKPSVSLYNIL 566
           +++G+KP +  Y+ L
Sbjct: 506 VRIGVKPDIITYSTL 520



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           ++  +I A+ K    DQA+  F +M   G+ P + T+ +++  + KS   +    +F   
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            + R      VY+   LI   C     +KA E++ ++ + G   + + + S+ID  CK G
Sbjct: 436 IDERLSPGNIVYNS--LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  ++ LF  +  +G+     TY+ LI G    G   +  +    M   G+ P   TYN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ +   LF EM    V+ +++TYN ++ GL +  R   A+ L   +  +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G    + TYN ++ G C    TD+A R+F  L          T+N++I A  K G +  A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL   +   G+ P   TY+++ ++ +    +E+  +++  M+++G + +      ++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 465 LCMKGNMKEA 474
           L  +G++  A
Sbjct: 734 LLQRGDITRA 743



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 179/392 (45%), Gaps = 12/392 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T +  Y ++I    KS   + A+ YF QM+D  + P +  +NSL+  +   C FDK 
Sbjct: 406 NPDTVT--YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFDK- 459

Query: 161 W-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           W     L        + LD   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG C  G ++ A  L   +  +G+     TY  LI G  K    +D    + +M+ +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           VSP + TYN ++       + +   +L+  +        + TYN ++ GLCK     EA 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+   + +  +     T+N +I      G  D+A  LF  L +NG  P V TY+++    
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  +   DL   MEE G T +      ++   ++  D+ +A     ++ +  FS + 
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            T  + +  L   G  +E  +     +++ +E
Sbjct: 760 STASLFLD-LLSGGKYQEYHRFLPEKYKSFIE 790



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET---KLEPNDVVY 493
           E A  ++  + + G    +Y     +  +         S+ +N M      ++ PN   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQML 552
            +++   C  G        LG + +KG + +  +++  +  LC D +  +A +++L +M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 553 KLGLKPSVSLYNILYRA 569
           +LG  P+V  YNIL + 
Sbjct: 155 QLGCIPNVFSYNILLKG 171


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 227/450 (50%), Gaps = 5/450 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCE 187
           F  +L  G  P + T  +L+  +       +   F  +       L+   +G LI G C+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G  + A ++L +++     PNVV+Y ++ID  CK   +  A  L+ ++   G+     T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ LI G    G   D    + KM    ++P +YT++ L+  +C EG+V E   +   M 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  +VVTY +L+ G C   +V +A+ + + M   G++ NV +YN +I+GFC   + D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF ++      P VVTYN LI    K+G    A  LV EM +RG+   ++TY  ++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  ++  ++KA  + + M+  G  PD+YTY +LI GLC  G +K+A  +F  +      
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
                Y +MI G+C      +AL LL +M + G +PN  +Y   I  L +  +   AE L
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533

Query: 548 LNQMLKLGL----KPSVSLYNILYRAKNNI 573
           L +M+  GL    K +  L+   ++ ++N+
Sbjct: 534 LREMIARGLLFGWKKAYCLFTRFFQRRSNL 563



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 196/393 (49%), Gaps = 35/393 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +F ILI    + G  + +F V   + + G+ PN +  T+LI G C  G I +     
Sbjct: 90  DLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQ----- 144

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
                                            F++K+   G   +   Y  LI+  C  
Sbjct: 145 ------------------------------ALHFHDKVVALGFHLNKVCYGTLINGLCKV 174

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S   +L   +  + V  NVV YNT+I  +CK   V EA  L  +M   GISP+V+TY
Sbjct: 175 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 234

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + LI GFC  G+ + A  LFN++ S   +P V T+++L+  F K G  K A +++  M +
Sbjct: 235 SALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK 294

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +GI P  VTY  L+D +     + KA  +++ M + G + +V +Y ++I+G C    + E
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  LF  M    + P+ V YN +I G CK G    AL+L+ EM+++G+  +  +Y+S + 
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC++ +  +A  LL +M   G++P +  Y IL
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPDMYTYTIL 447



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 1/345 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID+  K +L ++A   + +M+  G+ P   T+++L+  F I     D   LF   
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              ++  DVY+F IL+ G C+ G + +A  VL  + + G  P+VV Y SL+DG C    +
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +AK +F  + + G+ A   +Y ++I G  K     +    +++M    + P + TYN L
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  GK+S   KL DEM  R V  + +TYN+++  LCK  +V +A  LL +MK  GI
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ TY  LIDG C  G    A  +F  L   G + +V TY V+I+ F        A  
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA 497

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           L+ +ME+ G  P+  TY I+I S    D+ + A ++   M   G 
Sbjct: 498 LLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 184/372 (49%)

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            N++  +  +P +  +  ++    K    + A  L R++   G+ +   T+ +LI    +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G     F  +  +   G  P+  T   LI   C +G++ +     D++       N V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y TLI GLCK  +   A +LL ++    + PNV+ YN +ID  C     ++AF L++++ 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S G SP VVTY+ LI  F   G    A  L  +M    I P   T++IL+D F +   ++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A  + ++M K G  PDV TY  L+ G C+   + +A  +FN+M +  +  N   YN+MI
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+CK      A+ L  EM+ K ++P++ +Y+S I  LC+ GK   A  L+++M   G+ 
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 558 PSVSLYNILYRA 569
                YN +  A
Sbjct: 404 HDKITYNSILDA 415


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 264/538 (49%), Gaps = 8/538 (1%)

Query: 35  ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ 94
           A+ + ++  P +   + RL  S+ S  SHA  Q L +   + R   +     SL  H   
Sbjct: 75  AALRRVRLDPDAALHLFRLAPSRPSLVSHA--QLLHILARARRFHDARALLSSLPPHAEP 132

Query: 95  LFPSSS---NPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           LFP  +      T S + ++ ++ AH  +     AL  F  M   G RP   + N LL  
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192

Query: 151 VIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           +++S       + + + R   V  D ++  I+ K  C  G + +A E + ++E MG   N
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +V Y +++D  C  G  E A+ +   +   GL     TYT+L+ G  K+G  ++     +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312

Query: 270 KMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +M+  G +      Y  +I+ YC  G++ +  ++ +EMR   +  N+  YNT+I GLCK 
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R++E +++L +M+  G+ P+  +YN LIDG+C  G   KAF +   +  NG + + +TY
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N L++ F        A  L   M +RG+ P+E++ + L+D   ++   E+A  ++     
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G + +V T+  +I+GLC  G M EA +L + M E +  P+ + Y  +  GYCK G    
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L+ +M   G  P++  ++S I       +W +   + ++M   GL P++  Y  L
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 255/514 (49%), Gaps = 27/514 (5%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           +G  T ++   R     L   FP+      SS+P+T + L  ++     + RL   A  +
Sbjct: 34  AGAATDTTLLGRFTRLLLLHRFPAAERLLASSSPLTPALLQAAL----RRVRLDPDAALH 89

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE------LDVY------ 176
             ++  S  RP   +   LL  + ++  F       S      E       +VY      
Sbjct: 90  LFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFS 147

Query: 177 --SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
             SF +L++   +AG L+ A  V + + ++G  P++     L++   ++GD   A M++ 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   G++  + T  ++     ++G      EF E+M+  G+  +L  Y+ ++  YC  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPNVITY 353
              +  ++ + ++ + ++ NVVTY  L+ G CK+ R++EAER++ +MK  G I  + + Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I+G+C  G  D A R+ N+++  G   ++  YN +I    K G  +    +++EME+
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P + +Y  LID + R   M KAFEM  +M ++G +    TY  L+ G C    + +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  M +  + PN++  + ++ G  K G + +AL L  E   +GL  N+ ++++ I 
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            LC+ G+  EAE LL++M +L   P    Y  L+
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 222/475 (46%), Gaps = 27/475 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           +Y ++I+   K    ++      +M D G+RP   ++N+L+    +  S  K + +    
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +     ++  L+KG C    ++ A  +   + + G +PN +  ++L+DG  K G  
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L+++    GL     T+  +I GL K G   +  E  ++M+     P   TY  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
              YC  G++     L ++M H   A +V  +N+ I G     +  +   +  +M   G+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN++TY  LI G+C  G   +A  L+ ++ +NG +P+V   + L+  F K G    A+ 
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 407 LVREMEERGITP--------------------------SEVTYTILIDSFVRSDDMEKAF 440
           +++++    + P                          + V + ++I    +S  +  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  ++   F PD +TY  LIHG    G++ EA  L + M    L PN + YN +I+G 
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           CK G   RA+ L  ++  KG+ PN  +Y++ I   C++GK  EA  L  +M++ G
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 214/472 (45%), Gaps = 34/472 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++         D AL  +  ML  GV P   + ++LL  + K+   ++    + E  
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +V +F  +I G C+ G + +A E+L++++E+   P+ + Y +L DG CK G + 
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  K+  LG   +   +   I G F         + + +M   G+SP+L TY  LI
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----KM 343
             +C EG + E   L+ EM +  +  NV   + L+    KE +V EA  +L ++     +
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G S + I             E DK   + + +       + V +NV+I    K+G    
Sbjct: 672 PGCSISTI-------------EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   +  +   P   TY+ LI     S  +++AF +  +M  +G +P++ TY  LI+
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA-------------- 509
           GLC  G +  A  LFN +    + PN + YN +I  YCKEG +  A              
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYME 838

Query: 510 --LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             ++LL +M E  + PN  +Y + I    + G   E   L ++M   GL P+
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 202/429 (47%), Gaps = 47/429 (10%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---EN 167
           +++D   K+  ++QAL  + + L  G+     TFN+++  + K     +         E 
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           RC    D  ++  L  G C+ G L  A  ++N++E +GF+P+V ++ S I G        
Sbjct: 529 RCPP--DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +   +  ++   GL     TY  LI G  K G   +    Y +M  NG++P+++  + L+
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALM 646

Query: 288 HEYCNEGKVSEGFKLFDEMRHREV--ACNV------------------------VTYNTL 321
             +  EGKV E   +  ++ + ++   C++                        V +N +
Sbjct: 647 SCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLCK  R+ +A+ L + ++     P+  TY+ LI G   +G  D+AF L + + S G 
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           +P+++TYN LI    K+G    A +L  +++ +GI+P+ +TY  LID + +     +AF+
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 442 MYSLMQKSGF----------------SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +   M + G+                 P+  TY  LIHG    GNM+E SKL++ M    
Sbjct: 827 LKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 886

Query: 486 LEPNDVVYN 494
           L P + + N
Sbjct: 887 LLPTNWIGN 895



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 172/369 (46%), Gaps = 48/369 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ D + K      A    ++M   G  P    FNS +     +  + K     SE  
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  ++ ++G LI G C+ G+L++A  +  ++   G +PNV I ++L+    K G ++
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVD 656

Query: 228 RAKMLFRKIGELGLV----------------------ATQHT----YTVLICGLFKNGLQ 261
            A ++ +K+  + ++                         H+    + V+I GL K+G  
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            D    +E ++     P  +TY+ LIH     G + E F L D M    +  N++TYN+L
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSL 776

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL--------- 372
           I GLCK  ++  A  L ++++  GISPN ITYN LID +C  G+T +AF+L         
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836

Query: 373 -------FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                   +Q+  N   P+ +TY  LI  + K+GN +  S L  EM  RG+ P     T 
Sbjct: 837 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP-----TN 891

Query: 426 LIDSFVRSD 434
            I ++ RSD
Sbjct: 892 WIGNWKRSD 900



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 153/305 (50%), Gaps = 6/305 (1%)

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E Y     + VS     ++ L+  + + G++S    +FD M       ++ + N L+  L
Sbjct: 139 EVYRDFTFSAVS-----FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            +      A  +  QM++AG+ P+  T   +   +C  G   +A     +++  G   ++
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           V Y+ ++  +   G ++ A  ++  ++ +G++P+ VTYT+L+  + +   ME+A  +   
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 446 MQKSG-FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           M+++G    D   YG++I+G C +G M +A+++ N M +  +  N  VYN MI G CK G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                 ++L EM + G+ P+  SY++ I   C++G   +A  +   M++ GL  +   YN
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 565 ILYRA 569
            L + 
Sbjct: 434 TLLKG 438


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 271/549 (49%), Gaps = 34/549 (6%)

Query: 41  QHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT---PRSLLCHLTQLFP 97
           + T +S +++L +L+S    + H  A  +   ++S +I  + FT       LC + ++  
Sbjct: 173 EPTFKSYNVVLEILVS---GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 98  SSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           + S          V  S +Y+++I +  K    ++AL    +M   G  P + TFN +++
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289

Query: 150 FVIKSCSFDKGWLFFSE-----NRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            +   C FD+     +E     NR  +     D  ++G L+ G C+ G ++ A ++  ++
Sbjct: 290 GL---CKFDR----INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            +    P  VI+ +LI G   +G ++ AK +L   +   G+V    TY  LI G +K GL
Sbjct: 343 PK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                E    M+  G  P++Y+Y  L+  +C  GK+ E + L +EM    +  N V +N 
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI   CKE R+ EA  +  +M   G  P+V T+N LI G C+  E   A  L   + S G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
              + VTYN LI AF + G  K A  LV EM  +G    E+TY  LI    R+ +++KA 
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  M + G  P   +  +LI+GLC  G ++EA +    M      P+ V +N +I G 
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G     L +  ++  +G+ P+  +Y++ +  LC+ G   +A +LL++ ++ G  P+ 
Sbjct: 639 CRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPND 698

Query: 561 SLYNILYRA 569
             ++IL ++
Sbjct: 699 RTWSILLQS 707



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 181/405 (44%), Gaps = 23/405 (5%)

Query: 35  ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ 94
           A++      P+  S+I   L+    +H        +L   S  +TS    P   +C    
Sbjct: 334 AAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVL---SDMVTSYGIVPD--VCT--- 385

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
                         Y S+I  + K  L   AL     M + G +P   ++  L+    K 
Sbjct: 386 --------------YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKL 431

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              D+ +   +E     ++ +   F  LI   C+   + +A E+  ++   G  P+V  +
Sbjct: 432 GKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 491

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            SLI G C+  +I+ A  L R +   G+VA   TY  LI    + G  K+  +   +M  
Sbjct: 492 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 551

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G      TYN LI   C  G+V +   LF++M    +  + ++ N LI GLC+   V+E
Sbjct: 552 QGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A     +M + G +P+++T+N LI+G C AG  +    +F +L++ G  P  VTYN L+ 
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              K G    A  L+ E  E G  P++ T++IL+ S V  + +++
Sbjct: 672 WLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 6/294 (2%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G   S   Y  LI +  + G+     +L  +M+   +      + +++    K     + 
Sbjct: 100 GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQT 159

Query: 335 ERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            RL+ +M+ +    P   +YN +++          A  +F  + S    P++ T+ V+++
Sbjct: 160 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 219

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A         A  ++R+M + G  P+ V Y  LI S  + + + +A ++   M   G  P
Sbjct: 220 ALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D  T+  +I GLC    + EA+K+ N M      P+D+ Y  ++ G CK G    A  L 
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
             + +    P    +++ I      G+  +A+ +L+ M+   G+ P V  YN L
Sbjct: 340 YRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 389


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 232/471 (49%), Gaps = 6/471 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           Y +++        S +AL   H M D    G  P   ++N++L    K    DK +  + 
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225

Query: 166 ENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   +  L DV ++  +I   C+A  ++KA EVLN + + G  P+ + Y S++ G C +G
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             + A    +K+   G+     TY+ L+  L KNG   +  + ++ M   G+ P + TY 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+  Y  +G + E   L D M    +  +   +N LIC   K+ +V +A  +  +M+  
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH 405

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PNV+ Y  +ID  C +G  D A   F Q+   G +P+++ Y  LI           A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L+ EM +RGI  + + +  +IDS  +   + ++ +++ LM + G  PD+ TY  LI G
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C+ G M EA+KL  SM    ++P+ V Y  +I GYC+      AL L  EM   G+ PN
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNNI 573
           I +Y+  +  L    +   A+ L   + K G +  +S YNI+     KNN+
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y SI+  +  S    +A+    +M   GV P   T++SL+ ++ K+  S +   +F S  
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D+ ++  L++G    G L +   +L+ +   G  P+  ++  LI    K   ++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A ++F K+ + GL      Y  +I  L K+G   D   ++E+M   G++P++  Y  LI
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +N++I   CKE RV E+E+L D M   G+ 
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LIDG C AG+ D+A +L   + S G  P +VTY  LI  + +      A  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM   G++P+ +TY I++     +     A E+Y  + KSG   ++ TY +++HGLC 
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                EA ++F ++  T L+     +N+MI    K G    A  L    +  GLVP++ +
Sbjct: 634 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 693

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           YS     L + G   E + L   M + G      + N + R
Sbjct: 694 YSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 218/436 (50%), Gaps = 39/436 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++ ILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ ELG +    +Y  L+ GL      ++  E    M  +   G  P + +YN 
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +++ +  EG   + +  + EM  R +  +VVTY+++I  LCK   + +A  +L+ M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TYN ++ G+C +G+  +A     +++S+G  P+VVTY+ L+    K G S  A 
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 406 DLVREMEERGITPSEVTY-----------------------------------TILIDSF 430
            +   M +RG+ P   TY                                    ILI ++
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            + + +++A  ++S M++ G +P+V  YG +I  LC  G++ +A   F  M +  L PN 
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +VY  +I G C      +A  L+ EM ++G+  N   ++S I   C++G+  E+E L + 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 551 MLKLGLKPSVSLYNIL 566
           M+++G+KP +  YN L
Sbjct: 507 MVRIGVKPDIITYNTL 522



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 223/462 (48%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++++   K   SD+A   +H+MLD G+ P   T++S++  + K+ + DK   +  +  
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  D  ++  ++ G C +G   +A   L ++   G  PNVV Y+SL++  CKNG   
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY  L+ G    G   +     + M  NG+ P  + +N LI
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  + KV +   +F +MR   +  NVV Y T+I  LCK   V +A    +QM   G++
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+I Y  LI G C   + DKA  L  ++   G   + + +N +I +  K G    +  L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M   G+ P  +TY  LID    +  M++A ++ + M   G  PD+ TYG LI+G C 
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M +A  LF  M  + + PN + YN+++ G      +  A  L   + + G    +++
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  LC++    EA  +   +    L+     +NI+  A
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 665



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 224/475 (47%), Gaps = 38/475 (8%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y S+++   K+  S +A   F  M   G+ P 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVT--YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  ++ D + F ILI    +   +++A  V +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PNVV Y ++ID  CK+G ++ A + F ++ + GL      YT LI GL    
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E   +M   G+  +   +N +I  +C EG+V E  KLFD M    V  +++TYN
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ P+++TY  LI+G+C     D A  LF ++ S+
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG------------------------ 415
           G SP+++TYN++++       +  A +L   + + G                        
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 416 --------ITPSEV---TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                   +T  ++   T+ I+I + ++   M++A ++++    +G  PDV TY ++   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           L  +G+++E   LF SM E     +  + N ++    + G+  RA   L  ++EK
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 164/355 (46%), Gaps = 1/355 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   KS   D A+ YF QM+D G+ P    + SL+  +     +DK      E  
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++ + +  +G  P+++ Y +LIDGCC  G ++
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +G+     TY  LI G  +     D    +++M  +GVSP++ TYN ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               +  + +   +L+  +        + TYN ++ GLCK     EA R+   + +  + 
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +I      G  D+A  LF    +NG  P V TY+++     + G+ +   DL
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
              MEE G +        ++   ++  D+ +A     ++ +  FS +  T   L+
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 228/425 (53%), Gaps = 3/425 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFF 164
           R Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F 
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT-EARKMFD 328

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           S  +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ LI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +++A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M    +SP    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C   K  +  +L  EM  R +  + + +N++I   CKE RV E+E+L D M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P++ITY+ LIDG+C AG+ D+A +L   + S G  P  VTYN LI  + K    + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L REME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HG
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC      EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 525 IASYS 529
           + +YS
Sbjct: 689 VRTYS 693



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 37/437 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G  + GDL+KA+   +++ + G  PNVV Y+S+I   CK   +++A  + 
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G++    TY  ++ G   +G  K+   F +KM  +GV P + TYN L+   C  
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNT--------------------------------- 320
           G+ +E  K+FD M  R +   + TY T                                 
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 321 --LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LIC   K+ +V +A  +  +M+  G++P+ +TY  +I   C +G  + A R F Q+  
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              SP  + YN LI +         A +L+ EM +RGI    + +  +IDS  +   + +
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           + +++ LM + G  PD+ TY  LI G C+ G M EA+KL  SM    ++P+ V YN +I 
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      AL L  EM   G+ P+I +Y+  +  L Q  +   A+ L   + + G + 
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 559 SVSLYNILYRA--KNNI 573
            +S YNI+     KNN+
Sbjct: 618 ELSTYNIILHGLCKNNL 634



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 242/521 (46%), Gaps = 39/521 (7%)

Query: 91  HLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
            L Q+ P          + Y ++I+   K    D+A   +H+MLD G+ P   T++S++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 150 FVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            + K+ + DK   +  S  +  V  +  ++  ++ G C +G   +A   L ++   G  P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SL+D  CKNG    A+ +F  + + GL     TY  L+ G    G   +     
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           + M  NG+ P+ Y ++ LI  Y  +GKV +   +F +MR + +  + VTY T+I  LCK 
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKL-------------------------------- 356
            RV++A R  +QM    +SP  I YN L                                
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 357 ---IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              ID  C  G   ++ +LF+ +   G  P ++TY+ LI  +  AG    A+ L+  M  
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  VTY  LI+ + +   ME A  ++  M+ SG SPD+ TY +++ GL        
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  + E+  +     YN+++ G CK   +  ALR+   +    L     +++  IG
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            L + G+  EA+ L   +   GL P V  Y+++  A+N IE
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM--AENLIE 701



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 218/435 (50%), Gaps = 38/435 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  ++ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ +LG +    +Y +L+ GL      ++  E  + M  +G    P + +Y  +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +  EG + + +  + EM  R +  NVVTY+++I  LCK   + +A  +L  M   G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN ++ G+C +G+  +A     ++ S+G  P VVTYN L+    K G    A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 407 LVREMEERGITPSEVTY-----------------------------------TILIDSFV 431
           +   M +RG+ P   TY                                   +ILI ++ 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   +++A  ++S M++ G +PD  TYG +I  LC  G +++A + F  M + +L P ++
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VYN +I   C      +A  L+ EM ++G+  +   ++S I   C++G+  E+E L + M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 552 LKLGLKPSVSLYNIL 566
           +++G+KP +  Y+ L
Sbjct: 506 VRIGVKPDIITYSTL 520



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           ++  +I A+ K    DQA+  F +M   G+ P + T+ +++  + KS   +    +F   
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            + R      VY+   LI   C     +KA E++ ++ + G   + + + S+ID  CK G
Sbjct: 436 IDERLSPGNIVYNS--LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  ++ LF  +  +G+     TY+ LI G    G   +  +    M   G+ P   TYN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ +   LF EM    V+ +++TYN ++ GL +  R   A+ L   +  +
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G    + TYN ++ G C    TD+A R+F  L          T+N++I A  K G +  A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL   +   G+ P   TY+++ ++ +    +E+  +++  M+++G + +      ++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 465 LCMKGNMKEA 474
           L  +G++  A
Sbjct: 734 LLQRGDITRA 743



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 179/392 (45%), Gaps = 12/392 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP T +  Y ++I    KS   + A+ YF QM+D  + P +  +NSL+  +   C FDK 
Sbjct: 406 NPDTVT--YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL---CIFDK- 459

Query: 161 W-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           W     L        + LD   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG C  G ++ A  L   +  +G+     TY  LI G  K    +D    + +M+ +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           VSP + TYN ++       + +   +L+  +        + TYN ++ GLCK     EA 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+   + +  +     T+N +I      G  D+A  LF  L +NG  P V TY+++    
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            + G  +   DL   MEE G T +      ++   ++  D+ +A     ++ +  FS + 
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEA 759

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            T  + +  L   G  +E  +     +++ +E
Sbjct: 760 STASLFLD-LLSGGKYQEYHRFLPEKYKSFIE 790



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET---KLEPNDVVY 493
           E A  ++  + + G    +Y     +  +         S+ +N M      ++ PN   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA-EVLLNQML 552
            ++I   C  G        LG + +KG   +  +++  +  LC D +  +A +++L +M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 553 KLGLKPSVSLYNILYRA 569
           +LG  P+V  YNIL + 
Sbjct: 155 QLGCIPNVFSYNILLKG 171


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 264/538 (49%), Gaps = 8/538 (1%)

Query: 35  ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ 94
           A+ + ++  P +   + RL  S+ S  SHA  Q L +   + R   +     SL  H   
Sbjct: 75  AALRRVRLDPDAALHLFRLAPSRPSLVSHA--QLLHILARARRFHDARALLSSLPPHAEP 132

Query: 95  LFPSSS---NPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           LFP  +      T S + ++ ++ AH  +     AL  F  M   G RP   + N LL  
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192

Query: 151 VIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           +++S       + + + R   V  D ++  I+ K  C  G + +A E + ++E MG   N
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +V Y +++D  C  G  E A+ +   +   GL     TYT+L+ G  K+G  ++     +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312

Query: 270 KMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +M+  G +      Y  +I+ YC  G++ +  ++ +EMR   +  N+  YNT+I GLCK 
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R++E +++L +M+  G+ P+  +YN LIDG+C  G   KAF +   +  NG + + +TY
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N L++ F        A  L   M +RG+ P+E++ + L+D   ++   E+A  ++     
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G + +V T+  +I+GLC  G M EA +L + M E +  P+ + Y  +  GYCK G    
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L+ +M   G  P++  ++S I       +W +   + ++M   GL P++  Y  L
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 255/514 (49%), Gaps = 27/514 (5%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
           +G  T ++   R     L   FP+      SS+P+T + L  ++     + RL   A  +
Sbjct: 34  AGAATDTTLLGRFTRLLLLHRFPAAERLLASSSPLTPALLQAAL----RRVRLDPDAALH 89

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE------LDVY------ 176
             ++  S  RP   +   LL  + ++  F       S      E       +VY      
Sbjct: 90  LFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFS 147

Query: 177 --SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
             SF +L++   +AG L+ A  V + + ++G  P++     L++   ++GD   A M++ 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   G++  + T  ++     ++G      EF E+M+  G+  +L  Y+ ++  YC  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPNVITY 353
              +  ++ + ++ + ++ NVVTY  L+ G CK+ R++EAER++ +MK  G I  + + Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I+G+C  G  D A R+ N+++  G   ++  YN +I    K G  +    +++EME+
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P + +Y  LID + R   M KAFEM  +M ++G +    TY  L+ G C    + +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  M +  + PN++  + ++ G  K G + +AL L  E   +GL  N+ ++++ I 
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            LC+ G+  EAE LL++M +L   P    Y  L+
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 227/477 (47%), Gaps = 62/477 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++         D AL  +  ML  GV P   + ++LL  + K+   ++    + E  
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +V +F  +I G C+ G + +A E+L++++E+   P+ + Y +L DG CK G + 
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  K+  LG   +   +   I G F         + + +M   G+SP+L TY  LI
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 288 ---------HEYCN--------------------------EGKVSEGFKLFDEMRHREV- 311
                    HE CN                          EGKV E   +  ++ + ++ 
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 312 -ACNV------------------------VTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
             C++                        V +N +I GLCK  R+ +A+ L + ++    
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  TY+ LI G   +G  D+AF L + + S G +P+++TYN LI    K+G    A +
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +++ +GI+P+ +TY  LID + +     +AF++   M + G  P V TY +LI+GLC
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            +G M+EA KL + M E  ++PN + Y  +I GY K GN     +L  EM+ +GL+P
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 194/388 (50%), Gaps = 12/388 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ D + K      A    ++M   G  P    FNS +     +  + K     SE  
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  ++ ++G LI G C+ G+L++A  +  ++   G +PNV I ++L+    K G ++
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVD 656

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL-YTYNCL 286
            A ++ +K+  + ++      T+ I          D          +G   S    +N +
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEI----------DKISHVVDTIADGNPHSANVMWNVI 706

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++++   LF+ +R++    +  TY++LI G      + EA  L D M  AG+
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN+ITYN LI G C +G+  +A  LFN+L+S G SP+ +TYN LI  + K G +  A  
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L ++M E GI P+ +TY+ILI        ME+A ++   M ++   P+  TY  LIHG  
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYI 886

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYN 494
             GNM+E SKL++ M    L P + + N
Sbjct: 887 KSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 153/305 (50%), Gaps = 6/305 (1%)

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E Y     + VS     ++ L+  + + G++S    +FD M       ++ + N L+  L
Sbjct: 139 EVYRDFTFSAVS-----FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            +      A  +  QM++AG+ P+  T   +   +C  G   +A     +++  G   ++
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           V Y+ ++  +   G ++ A  ++  ++ +G++P+ VTYT+L+  + +   ME+A  +   
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 446 MQKSG-FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           M+++G    D   YG++I+G C +G M +A+++ N M +  +  N  VYN MI G CK G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                 ++L EM + G+ P+  SY++ I   C++G   +A  +   M++ GL  +   YN
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 565 ILYRA 569
            L + 
Sbjct: 434 TLLKG 438


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 231/441 (52%), Gaps = 2/441 (0%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSF 178
           +L D    +FH M+     P    F+ LL  + K   +D   +L+       +  ++ + 
Sbjct: 61  KLDDSLDLFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            IL+   C    L+ A   L ++ ++G  P++V + SL++G C+   I  A  +F ++ E
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           +G       Y  +I GL K+    +  +   +M+++G+ P   TYN LI   CN G+  +
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             ++   M  RE+  +V T+N LI    KE R+ EAE L ++M    + P+++TY+ LI 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G C     D+A ++F  + S G  P VVTY++LI  + K+   +    L  EM +RG+  
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + VTYT+LI  + R+  +  A E++  M   G  P++ TY VL+HGLC  G +++A  + 
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M ++ ++ + V YN++I G CK G    A  L   +N KGL P+I +Y++ +  L + 
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479

Query: 539 GKWPEAEVLLNQMLKLGLKPS 559
           G   EA+ L  +M + G+ P+
Sbjct: 480 GLRGEADALFRKMKEDGILPN 500



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 180/362 (49%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P++  ++ L+    K    +    L+ ++  LG+     T  +L+    +         F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             KM   G  P + T+  L++ +C   ++ +   +FD M       NVV YNT+I GLCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             +V  A  LL++M++ GI P+ +TYN LI G C++G  D A R+ + +      P V T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           +N LI A  K G    A +L  EM  R + P  VTY++LI        +++A +M+  M 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  PDV TY +LI+G C    ++   KLF  M +  +  N V Y ++I GYC+ G   
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A  +   M   G+ PNI +Y+  +  LC +GK  +A V+L  M K G+   +  YNI+ 
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 568 RA 569
           R 
Sbjct: 439 RG 440



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 207/440 (47%), Gaps = 41/440 (9%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L  H+ Q  P  S     SRL  +I     K +  D  ++ + QM   G+     T N 
Sbjct: 67  DLFFHMVQCRPLPS-IADFSRLLSAIS----KMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 147 LLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           LL    +         F  +  +   E D+ +FG L+ G C    +  A  + +++ EMG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           + PNVVIY ++IDG CK+  ++ A  L  ++   G+     TY  LI GL  +G   D  
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
                M    + P ++T+N LI     EG++SE  +L++EM  R +  ++VTY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ---- 381
           C   R+ EAE++   M   G  P+V+TY+ LI+G+C + + +   +LF ++   G     
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 382 -------------------------------SPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
                                           P+++TYNVL+      G  + A  ++ +
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M++ G+    VTY I+I    ++ ++  A+++Y  +   G +PD++TY  ++ GL  KG 
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481

Query: 471 MKEASKLFNSMWETKLEPND 490
             EA  LF  M E  + PN+
Sbjct: 482 RGEADALFRKMKEDGILPNE 501



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 147/335 (43%), Gaps = 15/335 (4%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L R + E G   T  + +  ICGL  +     G   Y +M  NG+               
Sbjct: 13  LHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYM------------ 60

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
              K+ +   LF  M       ++  ++ L+  + K  +      L +QM+M GI  N+ 
Sbjct: 61  ---KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T N L++ FC   +   A     ++   G  P +VT+  L+  F +      A  +   M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E G  P+ V Y  +ID   +S  ++ A ++ + M+  G  PD  TY  LI GLC  G  
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A+++ + M + ++ P+   +N +I    KEG    A  L  EM  + L P+I +YS  
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  LC   +  EAE +   M+  G  P V  Y+IL
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 15/248 (6%)

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           ICGLC   R         +M   GI      Y KL          D +  LF  +     
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGIR-----YMKL----------DDSLDLFFHMVQCRP 77

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            PS+  ++ L+ A SK     +   L  +M+  GI  +  T  IL++ F R   +  A  
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               M K G  PD+ T+G L++G C    + +A  +F+ M E   EPN V+YN +I G C
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K      AL LL  M   G+ P+  +Y+S I  LC  G+W +A  +++ M K  + P V 
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 562 LYNILYRA 569
            +N L  A
Sbjct: 258 TFNALIDA 265


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 228/450 (50%), Gaps = 2/450 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+ + K   +  A +YF +M+D G+ P   T+ SL+        + K +  ++E  
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  + Y+F  +I G C A  + +A  +  +++E    P+ V Y  +I+G C++G+I 
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++   G V   +TY  LI GL   G   +  EF + +  +    +   Y+ L+
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC EG+  +       M  R VA ++V Y  LI G  +E   +    LL +M   G+ 
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLR 504

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + Y  +ID    AG   +AF L++ +   G  P+VVTY  LI    KAG    A  L
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +E     +TP+ +TY   +D   R  +MEKA +++  M K GF     +Y +LI G C 
Sbjct: 565 SKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCR 623

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA+KL + M +  + P+ + Y+ +I+  CK  N   A++L   M +KGL P+  +
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           YS  +   C  G+  +A  L ++M++ G++
Sbjct: 684 YSFLVHGCCIAGELEKAFELRDEMIRRGMR 713



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 223/479 (46%), Gaps = 35/479 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           ++A   F +M + G+     T++ L+    +    D    F  +  +  +E  VY +  L
Sbjct: 209 NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSL 268

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G+ + A    +++ + G +P VV YTSLI G C  G+  +A  ++ ++   G+
Sbjct: 269 INGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI 328

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +T+T +I GL +  +  +    + +M+   + PS  TYN +I  +C  G +SE F 
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFH 388

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L DEM  +    +  TY  LI GLC   RV EA+  +D +       N + Y+ L+ G+C
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYC 448

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G    A      +   G +  +V Y +LI   ++  +++    L++EM   G+ P  V
Sbjct: 449 KEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAV 508

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT +ID   ++ ++++AF ++ +M   G  P+V TY  LI+GLC  G M +A  L    
Sbjct: 509 IYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKET 568

Query: 482 WETKLEPNDVVY----------------------------------NMMIFGYCKEGNSY 507
             + + PN + Y                                  N++I G+C+ G   
Sbjct: 569 LVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIE 628

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A +LL  M +  ++P+  +YS+ I   C+     EA  L + ML  GLKP    Y+ L
Sbjct: 629 EATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFL 687



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 216/462 (46%), Gaps = 27/462 (5%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGD 190
           M D  + P   T ++LL  +++   F+   L F +     V+ D+Y +  +++  CE  D
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN--------------------------G 224
            NKA E+++ +E      ++V+Y  LI G CK+                          G
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
               A++LF+++GE GL A   TY++LI    + G   +   F +KM    +  ++Y YN
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC  G  S     FDEM  + +   VVTY +LI G C E    +A ++ ++M   
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GISPN  T+  +I G C A    +A RLF ++K     PS VTYNV+I    ++GN   A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L+ EM  +G  P   TY  LI        + +A E    + K     +   Y  L+HG
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C +G  K+A      M E  +  + V Y ++I G  +E ++     LL EM+  GL P+
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              Y++ I    + G   EA  L + M+  G  P+V  Y  L
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTAL 548



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/393 (33%), Positives = 188/393 (47%), Gaps = 1/393 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++ ILI   C  G+++ A   L+++ +      V  Y SLI+G CK G+   AK  F ++
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + GL  T  TYT LI G    G     F+ Y +M   G+SP+ YT+  +I   C    +
Sbjct: 289 IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +E  +LF EM+ R++  + VTYN +I G C+   + EA  LLD+M   G  P+  TY  L
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C  G   +A    + L  +    + + Y+ L+  + K G  K A    R M ERG+
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
               V Y ILID   R  D    F +   M   G  PD   Y  +I      GN+KEA  
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L++ M +    PN V Y  +I G CK G   +A  L  E     + PN  +Y   +  L 
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   +A  L + MLK  L  +VS YNIL R 
Sbjct: 589 RGGNMEKAVQLHHAMLKGFLATTVS-YNILIRG 620



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 167/346 (48%), Gaps = 26/346 (7%)

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + +  L+    T + L+ GL +     D    ++ +    V P +Y Y+ ++   C  
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV---------------------- 331
              ++  ++   M   +   ++V YN LI GLCK  R+                      
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 332 ----QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                EAE L  +M   G+  N ITY+ LID FC  GE D A    +++       +V  
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN LI  + K GN+  A     EM ++G+TP+ VTYT LI  +    +  KAF++Y+ M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G SP+ YT+  +I GLC    M EA +LF  M E K+ P++V YN+MI G+C+ GN  
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            A  LL EM  KG VP+  +Y   I  LC  G+  EA+  ++ + K
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHK 430



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 188/385 (48%), Gaps = 2/385 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + +II    ++ +  +A+  F +M +  + P   T+N ++    +S +  + +    E  
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D Y++  LI G C  G +++A E ++ L +     N + Y++L+ G CK G  +
Sbjct: 395 GKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFK 454

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A    R + E G+      Y +LI G  +    +  F   ++M  +G+ P    Y  +I
Sbjct: 455 DAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +   G + E F L+D M       NVVTY  LI GLCK   + +AE L  +  ++ ++
Sbjct: 515 DRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVT 574

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN ITY   +D     G  +KA +L + +   G   + V+YN+LIR F + G  + A+ L
Sbjct: 575 PNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKL 633

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M +  I P  +TY+ +I    +  ++++A +++  M   G  PD   Y  L+HG C+
Sbjct: 634 LHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCI 693

Query: 468 KGNMKEASKLFNSMWETKLEPNDVV 492
            G +++A +L + M    +  N V 
Sbjct: 694 AGELEKAFELRDEMIRRGMRSNHVT 718



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R M++  + P   T + L++  +R         ++  +  +   PD+Y Y  ++  LC  
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            +  +A ++ + M   + + + VVYN++I G CK    + AL +   + +KGL  N+ +Y
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                     GK+ EAE+L  +M + GL  +   Y+IL
Sbjct: 205 Y---------GKFNEAELLFKEMGEKGLCANHITYSIL 233


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 232/471 (49%), Gaps = 6/471 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           Y +++        S +AL   H M D    G  P   ++N++L    K    DK +  + 
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225

Query: 166 ENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   +  L DV ++  +I   C+A  ++KA EVLN + + G  P+ + Y S++ G C +G
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             + A    +K+   G+     TY+ L+  L KNG   +  + ++ M   G+ P + TY 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+  Y  +G + E   L D M    +  +   +N LIC   K+ +V +A  +  +M+  
Sbjct: 346 TLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH 405

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PNV+ Y  +ID  C +G  D A   F Q+   G +P+++ Y  LI           A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L+ EM +RGI  + + +  +IDS  +   + ++ +++ LM + G  PD+ TY  LI G
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C+ G M EA+KL  SM    ++P+ V Y  +I GYC+      AL L  EM   G+ PN
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNNI 573
           I +Y+  +  L    +   A+ L   + K G +  +S YNI+     KNN+
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y SI+  +  S    +A+    +M   GV P   T++SL+ ++ K+  S +   +F S  
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D+ ++  L++G    G L +   +L+ +   G  P+  ++  LI    K   ++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A ++F K+ + GL      Y  +I  L K+G   D   ++E+M   G++P++  Y  LI
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +N++I   CKE RV E+E+L D M   G+ 
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ITYN LIDG C AG+ D+A +L   + S G  P +VTY  LI  + +      A  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM   G++P+ +TY I++     +     A E+Y  + KSG   ++ TY +++HGLC 
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                EA ++F ++  T L+     +N+MI    K G    A  L    +  GLVP++ +
Sbjct: 634 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 693

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           YS     L + G   E + L   M + G      + N + R
Sbjct: 694 YSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 218/436 (50%), Gaps = 39/436 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++ ILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ ELG +    +Y  L+ GL      ++  E    M  +   G  P + +YN 
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +++ +  EG   + +  + EM  R +  +VVTY+++I  LCK   + +A  +L+ M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TYN ++ G+C +G+  +A     +++S+G  P+VVTY+ L+    K G S  A 
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 406 DLVREMEERGITPSEVTY-----------------------------------TILIDSF 430
            +   M +RG+ P   TY                                    ILI ++
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            + + +++A  ++S M++ G +P+V  YG +I  LC  G++ +A   F  M +  L PN 
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +VY  +I G C      +A  L+ EM ++G+  N   ++S I   C++G+  E+E L + 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 551 MLKLGLKPSVSLYNIL 566
           M+++G+KP +  YN L
Sbjct: 507 MVRIGVKPDIITYNTL 522



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 223/462 (48%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++++   K   SD+A   +H+MLD G+ P   T++S++  + K+ + DK   +  +  
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  D  ++  ++ G C +G   +A   L ++   G  PNVV Y+SL++  CKNG   
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY  L+ G    G   +     + M  NG+ P  + +N LI
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  + KV +   +F +MR   +  NVV Y T+I  LCK   V +A    +QM   G++
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+I Y  LI G C   + DKA  L  ++   G   + + +N +I +  K G    +  L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M   G+ P  +TY  LID    +  M++A ++ + M   G  PD+ TYG LI+G C 
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M +A  LF  M  + + PN + YN+++ G      +  A  L   + + G    +++
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  LC++    EA  +   +    L+     +NI+  A
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 665



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 221/469 (47%), Gaps = 3/469 (0%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y S+++   K+  S +A   F  M   G+ P 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVT--YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  ++ D + F ILI    +   +++A  V +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PNVV Y ++ID  CK+G ++ A + F ++ + GL      YT LI GL    
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E   +M   G+  +   +N +I  +C EG+V E  KLFD M    V  +++TYN
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ P+++TY  LI+G+C     D A  LF ++ S+
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+++TYN++++       +  A +L   + + G      TY I++    +++  ++A
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
             M+  +  +    +  T+ ++I  L   G M EA  LF +     L P+   Y++M   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
             ++G+      L   M E G   +    +S +  L Q G    A   L
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 164/355 (46%), Gaps = 1/355 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   KS   D A+ YF QM+D G+ P    + SL+  +     +DK      E  
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++ + +  +G  P+++ Y +LIDGCC  G ++
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +G+     TY  LI G  +     D    +++M  +GVSP++ TYN ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               +  + +   +L+  +        + TYN ++ GLCK     EA R+   + +  + 
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +I      G  D+A  LF    +NG  P V TY+++     + G+ +   DL
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
              MEE G +        ++   ++  D+ +A     ++ +  FS +  T   L+
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 272/572 (47%), Gaps = 19/572 (3%)

Query: 8   EGQALTLNLIS--RMAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHA 64
           EG+    N++   R A   P +A  LF   ++Q  + HT +S + +L L    M +H   
Sbjct: 73  EGRPGAQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLEL----MRAHGRV 128

Query: 65  AAQTLILKIISGRITSSSFTP-----RSL-----LCHLTQLFP--SSSNPVTKSRLYESI 112
                +  ++  +I  ++        RSL     L       P    +  V  S  Y  +
Sbjct: 129 RDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGL 188

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE 172
           I   +KS    +A+  +  M   G+ P   T++ L++   K       WL        V+
Sbjct: 189 IYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVK 248

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            +VYS+ I I+   +AG   +A+++L ++E+ G  P+VV  T LI   C  G +  AK +
Sbjct: 249 PNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDV 308

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F K+        + TY  L+     NG  +   E +  M+ +G + ++  Y  ++   C 
Sbjct: 309 FWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQ 368

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G+V E   +FD+M+ + +     +YN+LI G  K  R+  A  L + M + G +PN  T
Sbjct: 369 VGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYT 428

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y   I+ +  +GE+ KA + +  +KS G  P VV  N ++ + +K+G   MA  +  E++
Sbjct: 429 YVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELK 488

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G+ P  +TYT++I    ++ + ++A +++S M ++   PDV     LI  L   G   
Sbjct: 489 SIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGN 548

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA K+F+ + E  L+P D  YN ++ G  +EG     + LL EMN     PN+ +Y++ +
Sbjct: 549 EAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVL 608

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             LC++G+   A  +L  M   G  P +S YN
Sbjct: 609 DCLCKNGEVNYALGMLYNMTMKGCMPDLSSYN 640



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
            +I+ + +K+ L ++AL    + +L  G +   ++F+SL+  ++K    +K  + F+EN  
Sbjct: 675  TILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKS-IEFAENIA 733

Query: 170  --KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ LD +    LI+  C++    +A E++ + E +G S     Y +LI G      I+
Sbjct: 734  LSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLID 793

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A+ LF ++  LG    + TY +++  + K+   +D  +  ++M   G   +  TYN +I
Sbjct: 794  VAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTII 853

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                    + E   L+ ++     +    TY  L+ GL K+ ++++AE L D+M   G  
Sbjct: 854  SGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCK 913

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            PN   YN L++G+  AG T+K   LF  +   G +P + +Y VLI A   AG    +   
Sbjct: 914  PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY 973

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             R++ E G+ P  +TY +LI    RS  +E+A  +++ M+KSG +P++YTY  LI  L  
Sbjct: 974  FRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGK 1033

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            +G   EA K++  + +   +PN   YN +I GY   G++  A    G+M   G  PN ++
Sbjct: 1034 EGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSST 1093

Query: 528  Y 528
            Y
Sbjct: 1094 Y 1094



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 37/509 (7%)

Query: 91   HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
            HL +   S+S P      Y +++D   K+   + AL   + M   G  P  +++N+ L  
Sbjct: 587  HLLEEMNSNSYP-PNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHG 645

Query: 151  VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ---------- 200
            ++K     + +  F + +  +  D  +   ++    + G +N+A   L +          
Sbjct: 646  LVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKAD 705

Query: 201  -----------LEEMG------FSPNVVIYTSLIDG---------CCKNGDIERAKMLFR 234
                       L+  G      F+ N+ +   L+D           CK+     A  L +
Sbjct: 706  RSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVK 765

Query: 235  KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            K   LG+     +Y  LICGL    L       + +M+  G  P  +TYN ++       
Sbjct: 766  KFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSM 825

Query: 295  KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            ++ +  K+  EM  +      VTYNT+I GL K   + EA  L  ++   G SP   TY 
Sbjct: 826  RIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYG 885

Query: 355  KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             L+DG    G+ + A  LF+++   G  P+   YN+L+  +  AGN++   +L + M ++
Sbjct: 886  PLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQ 945

Query: 415  GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            GI P   +YT+LI +   +  +  +   +  + + G  PD+ TY +LIHGL   G ++EA
Sbjct: 946  GINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEA 1005

Query: 475  SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
              LFN M ++ + PN   YN +I    KEG +  A ++  E+ + G  PN+ +Y++ IG 
Sbjct: 1006 VSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGG 1065

Query: 535  LCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                G    A     QM+  G  P+ S Y
Sbjct: 1066 YSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 212/447 (47%), Gaps = 5/447 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS--FDKGWLFFSENRCKVELDVYSFGI 180
           ++A     +M D G +P   T N++LI ++       D   +F+       + D  ++  
Sbjct: 268 EEAYKILQKMEDEGCKPDVVT-NTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYIT 326

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+  C + GD     E+ N ++  G++ NVV YT+++D  C+ G ++ A  +F ++ + G
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +   Q++Y  LI G  K        E +  M ++G +P+ YTY   I+ Y   G+  +  
Sbjct: 387 IEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAI 446

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K ++ M+ + +  +VV  N ++  L K  R+  A+R+  ++K  G+ P+ ITY  +I   
Sbjct: 447 KRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCC 506

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             A   D+A ++F+++      P V+  N LI    KAG    A  +  E++E  + P++
Sbjct: 507 SKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  L+    R   +++   +   M  + + P++ TY  ++  LC  G +  A  +  +
Sbjct: 567 CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      P+   YN  + G  KE     A R+  +M +K L P+  +  + +    ++G 
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGL 685

Query: 541 WPEA-EVLLNQMLKLGLKPSVSLYNIL 566
             EA   L   +L+ G K   S ++ L
Sbjct: 686 MNEALHTLKEYILQPGSKADRSSFHSL 712



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 201/444 (45%), Gaps = 36/444 (8%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           D   +F    R  V+ +V +F  + +     G L  A   L  ++E G   N   Y  LI
Sbjct: 130 DMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLI 189

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
               K+G    A  +++ +   G+V +  TY+VL+    K  ++   +   E M+ +GV 
Sbjct: 190 YFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLRE-MEDHGVK 248

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE-- 335
           P++Y+Y   I      G+  E +K+  +M       +VVT   LI  LC   RV +A+  
Sbjct: 249 PNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDV 308

Query: 336 -----------------RLLDQ----------------MKMAGISPNVITYNKLIDGFCD 362
                             LLD+                MK  G + NV+ Y  ++D  C 
Sbjct: 309 FWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQ 368

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  D+A  +F+Q+K  G  P   +YN LI  F KA     A +L   M   G TP+  T
Sbjct: 369 VGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYT 428

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y + I+ + +S +  KA + Y LM+  G  PDV     +++ L   G +  A ++F+ + 
Sbjct: 429 YVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELK 488

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              + P+++ Y MMI    K  N+  A+++  EM E   VP++ + +S I  L + G+  
Sbjct: 489 SIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGN 548

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA  + +++ ++ L P+   YN L
Sbjct: 549 EAWKIFHELKEMNLDPTDCTYNTL 572



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 223/512 (43%), Gaps = 77/512 (15%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGC 185
           FH++   GV P + T+  ++    K+ + D+    FSE    RC    DV +   LI   
Sbjct: 484 FHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVP--DVLAVNSLIDTL 541

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
            +AG  N+A+++ ++L+EM   P    Y +L+ G  + G ++    L  ++         
Sbjct: 542 YKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNL 601

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY  ++  L KNG           M + G  P L +YN  +H    E +++E F++F +
Sbjct: 602 ITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ 661

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ---------------------MKMA 344
           M+ + +A +  T  T++    K   + EA   L +                     +K A
Sbjct: 662 MK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRA 720

Query: 345 GI------SPNVITYNKLIDGF---------CDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           G+      + N+     L+D F         C + +  +A  L  + +S G S    +YN
Sbjct: 721 GMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYN 780

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF---VRSDDMEK-------- 438
            LI          +A  L  EM+  G  P E TY +++D+    +R +DM K        
Sbjct: 781 ALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCK 840

Query: 439 ------------------------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                                   A ++Y  +   GFSP   TYG L+ GL   G +++A
Sbjct: 841 GYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDA 900

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF+ M +   +PN  +YN+++ GY   GN+ +   L   M ++G+ P+I SY+  IG 
Sbjct: 901 EDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGA 960

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G+  ++     Q+ +LGL+P +  YN+L
Sbjct: 961 LCTAGRLNDSLSYFRQLTELGLEPDLITYNLL 992



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 5/251 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
            Y +II   +KS++  +A+  +++++  G  P   T+  LL  ++K    +     F E  
Sbjct: 849  YNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEML 908

Query: 167  -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
               CK    +Y+  IL+ G   AG+  K  E+   + + G +P++  YT LI   C  G 
Sbjct: 909  DYGCKPNRAIYN--ILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +  +   FR++ ELGL     TY +LI GL ++G  ++    +  M+ +G++P+LYTYN 
Sbjct: 967  LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            LI     EGK +E  K+++E+       NV TYN LI G         A     QM + G
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086

Query: 346  ISPNVITYNKL 356
              PN  TY +L
Sbjct: 1087 CPPNSSTYMQL 1097


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 232/468 (49%), Gaps = 6/468 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y +I++A  K+  ++ A  +  ++L  G    S+   SLL+   +  +       F    
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C    +  S+ ILI G CE G L +AF + +Q+ E G  P+   YT LI   C  G
Sbjct: 258 REGTCAP--NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I++A  LF ++   G     HTYTVLI GL ++G  ++      KM  +G+ PS+ TYN
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC +G+V   F+L   M  R    NV T+N L+ GLC+  +  +A  LL +M   
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+SP++++YN LIDG C  G  + A++L   + S    P  +T+  +I AF K G + +A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           S  +  M  +GI+  EVT T LID          A  +   + K       ++  V++  
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L     +KE   +   + +  L P+ V Y  ++ G  + G+   + R+L  M   G +PN
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +  Y+  I  LCQ G+  EAE LL+ M   G+ P+   Y ++ +   N
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 209/436 (47%), Gaps = 36/436 (8%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y  +I A     L D+A   F +M+  G +P                          
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKP-------------------------- 334

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                   +V+++ +LI G C  G + +A  V  ++ + G  P+V+ Y +LI+G CK+G 
Sbjct: 335 --------NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGR 386

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  L   + +        T+  L+ GL + G         ++M  NG+SP + +YN 
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C EG ++  +KL   M   ++  + +T+  +I   CK+ +   A   L  M   G
Sbjct: 447 LIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           IS + +T   LIDG C+ G+T  A  +   L       +  + NV++   SK    K   
Sbjct: 507 ISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEEL 566

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            ++ ++ + G+ PS VTYT L+D  +RS D+  +F M  LM+ SG  P+VY Y ++I+GL
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGL 626

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G ++EA KL ++M ++ + PN V Y +M+ GY   G   RAL  +  M E+G   N 
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686

Query: 526 ASYSSTIG--VLCQDG 539
             YSS +   VL Q G
Sbjct: 687 RIYSSLLRGFVLSQKG 702



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 181/364 (49%), Gaps = 36/364 (9%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A+    ++E  GF   ++ Y ++++  CKNG  E A+M   KI ++G +   H  T L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVA 312
           G                                   +C    + +  K+FD M R    A
Sbjct: 239 G-----------------------------------FCRGLNLRDALKVFDLMSREGTCA 263

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N V+Y+ LI GLC+  R++EA  L DQM   G  P+  TY  LI   CD G  DKAF L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+++ + G  P+V TY VLI    + G  + A+ + R+M + GI PS +TY  LI+ + +
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +  AFE+ ++M+K    P+V T+  L+ GLC  G   +A  L   M +  L P+ V 
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I G C+EG+   A +LL  MN   L P+  ++++ I   C+ GK   A   L  ML
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 553 KLGL 556
           + G+
Sbjct: 504 RKGI 507



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 4/299 (1%)

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV---ACNVVTYNTLICGLCKE 328
           +L  VS     Y C      +  K+  GF  +   R  E       ++ Y T++  LCK 
Sbjct: 149 ELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKN 208

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVT 387
              + AE  + ++   G   +      L+ GFC       A ++F+ +   G  +P+ V+
Sbjct: 209 GYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVS 268

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y++LI    + G  + A  L  +M E+G  PS  TYT+LI +      ++KAF ++  M 
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  P+V+TY VLI GLC  G ++EA+ +   M +  + P+ + YN +I GYCK+G   
Sbjct: 329 ARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVV 388

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  LL  M ++   PN+ +++  +  LC+ GK  +A  LL +ML  GL P +  YN+L
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 224/524 (42%), Gaps = 87/524 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSE 166
           Y  +ID   +    ++A     +M+  G+ P   T+N+L+    K       +  L   E
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVME 398

Query: 167 NR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            R CK   +V +F  L++G C  G   KA  +L ++ + G SP++V Y  LIDG C+ G 
Sbjct: 399 KRACKP--NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  L   +    L     T+T +I    K G       F   M   G+S    T   
Sbjct: 457 MNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516

Query: 286 LIHEYCNEGK-----------------------------VSEGFKLFDEM------RHRE 310
           LI   CN GK                             +S+G KL +E+          
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +VVTY TL+ GL +   +  + R+L+ MK++G  PNV  Y  +I+G C  G  ++A 
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L + ++ +G SP+ VTY V+++ +   G    A + VR M ERG   ++  Y+ L+  F
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696

Query: 431 V------RSDDMEKAFEMYSLMQKSGFSPDVYTYGV---LIHGLCMKGNMKEASKLFNSM 481
           V      R  D E   E+ S++++ G S    T G+   L+  LC +G   E++ L  ++
Sbjct: 697 VLSQKGIRETDPECIKELISVVEQLGGS----TSGLCIFLVTRLCKEGRTDESNGLVQTI 752

Query: 482 WETKL---EPNDVV-------------------------------YNMMIFGYCKEGNSY 507
            ++ +   +  D++                               + ++I G  KEG++ 
Sbjct: 753 LKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTE 812

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           RA  L+ E+     V   +     +  L + G   E   L++Q+
Sbjct: 813 RARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQL 856



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 2/204 (0%)

Query: 365 ETDKAFRLFNQLKS-NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           E  K    F++L+  +G   +   Y+ L+ + +K     +A    R ME  G     + Y
Sbjct: 139 EMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDY 198

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM-W 482
             ++++  ++   E A      + K GF  D +    L+ G C   N+++A K+F+ M  
Sbjct: 199 RTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR 258

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           E    PN V Y+++I G C+ G    A  L  +M EKG  P+  +Y+  I  LC  G   
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  L ++M+  G KP+V  Y +L
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVL 342


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 272/558 (48%), Gaps = 27/558 (4%)

Query: 36  SRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILK--IISGR-ITSSSFTPR----- 86
           +R G +HT +S  I++ +L  ++M  H++   + L+L   ++ G  +    +T R     
Sbjct: 1   TRVGFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVP 60

Query: 87  ---------SLLCHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYF 129
                    S+L  L  L  +            + K+R   + +    K+   D +  +F
Sbjct: 61  GFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFF 120

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
             M+ +G+ P   T+N ++  V K          F +  +  +  D+ ++  LI G  + 
Sbjct: 121 RDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKI 180

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G L+++  +  +++ MG  P+V+ Y +LI+  CK   + RA   FR++ +  L     +Y
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           + LI  L K G+ +   +F+  M   G+ P+ +TY+ LI   C  G + E F L DEM  
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  N+VTY TL+ GLC+E  + EAE L   M  AG++PN+  Y  LI G       DK
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDK 360

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LFN+++     P ++ +  ++         +    ++ EM+E GI  + V YT L+D
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           ++ ++ +  +A  +   M+  G    V T+  LI GLC +G ++EA   F  M +  L+P
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N  VY  +I G CK      A +L  EM +K ++P+  +Y++ I    + G + EA  + 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 549 NQMLKLGLKPSVSLYNIL 566
           N+M+++G++  +  Y  L
Sbjct: 541 NKMMEMGIELDLYAYTSL 558



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 217/441 (49%), Gaps = 1/441 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCE 187
           F QM   G+ P   T+N+L+    K    D+    F E +    E DV ++  LI   C+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              + +AFE   ++++    PNV+ Y++LID  CK G ++ A   F  +  +GL+  + T
Sbjct: 215 FKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ LI    K G   + F   ++M    V  ++ TY  L+   C EG ++E  +LF  M 
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG 334

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N+  Y  LI G  K   + +A  L ++M+   I P+++ +  ++ G C   + +
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +   +  ++K +G   + V Y  L+ A+ KAGN   A +L+ EM + G   + VT+  LI
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   +   +++A   +  M      P+V  Y  LI GLC    + +A KLF+ M +  + 
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + Y  MI G  K GN   AL +  +M E G+  ++ +Y+S +  L Q G+  +A   
Sbjct: 515 PDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 548 LNQMLKLGLKPSVSLYNILYR 568
           L +M+  G+ P  +L   L R
Sbjct: 575 LAEMIGKGIIPDETLCTRLLR 595



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 194/371 (52%), Gaps = 4/371 (1%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P   ++ +L     + G +E A   F ++ +  ++    +    +  L K G      +F
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +  M   G++P+++TYN +I   C EG +     LF++M+   +  ++VTYNTLI G  K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              + E+  L ++MK  G  P+VITYN LI+ FC      +AF  F ++K     P+V++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y+ LI A  K G  +MA     +M   G+ P+E TY+ LID+  ++ ++ +AF +   M 
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           +     ++ TY  L+ GLC +G M EA +LF +M +  + PN   Y  +I G+ K  +  
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL- 566
           +A+ L  EM EK + P+I  + + +  LC + K  E ++++ +M + G+  +  +Y  L 
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 567 ---YRAKNNIE 574
              ++A N  E
Sbjct: 420 DAYFKAGNRTE 430



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 209/428 (48%), Gaps = 9/428 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I++  K +   +A  +F +M D  ++P   ++++L+  + K         FF +  
Sbjct: 205 YNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  + +++  LI   C+AG+L +AF + +++ +     N+V YT+L+DG C+ G + 
Sbjct: 265 RVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMN 324

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LFR +G+ G+      YT LI G  K        E + +M+   + P +  +  ++
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+E K+ E   +  EM+   +  N V Y TL+    K     EA  LL++M+  G  
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTE 444

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             V+T+  LIDG C  G   +A   F ++  +   P+V  Y  LI    K      A  L
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM+++ + P ++ YT +ID  ++  + ++A  M + M + G   D+Y Y  L+ GL  
Sbjct: 505 FDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQ 564

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL------ 521
            G +++A K    M    + P++ +   ++  + + GN   A+ L  E+ EKGL      
Sbjct: 565 CGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSN 624

Query: 522 --VPNIAS 527
             VPNI +
Sbjct: 625 PAVPNIQT 632


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 11/442 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCCEA 188
           +M   GVRP + T+ + L  + ++      W F  +  C+     + Y F  +I G C  
Sbjct: 238 EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFL-QMLCQRGYPCNSYCFNAVIHGFCHD 296

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G ++KA EV + +++ GF P+V  Y+ L+DG CK GD+     +  ++   G+     +Y
Sbjct: 297 GQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           + L+ GL + G  +  FE +++++  G       Y+ ++H  C    +   + L+++M H
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                +   Y++LI   C+  +++EA  + + M   GI PNV+T   L+ GF + G   +
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF   ++++  G  P++ TY V+I    K         +  +M +RG  P  V Y+I+ID
Sbjct: 477 AFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIID 536

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            FV++ D+++AF +Y  M   G  P+++TY  LI+GLC    + E   LF  M    L P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTP 596

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG----VLCQDGKWPEA 544
           + ++Y  +I  YCK  N   AL +  EM  +GL  +   Y+  IG    VL  DG    A
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDG----A 652

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
           ++ + +M+  GL P+V  Y  L
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDL 674



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 202/405 (49%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +F    +C    DV+S+ IL+ G C+ GD+   + +L ++   G +PN+V Y+SL+ G C
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G +E A  LF+++ + G       Y++++ G  ++   +  ++ +  M  +   P  Y
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y+ LI+ YC   ++ E  ++F+ M    +  NVVT   L+ G   E  + EA   LD++
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G+ PN+ TY  +I+G C   + +  + +F  +   G  P  V Y+++I  F KA + 
Sbjct: 485 RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L  +M + G  P+  TYT LI+     D + +   ++  M   G +PD   Y  L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I   C + NMK A ++F  M    L  +  VY  +I G+ K      A   + EM  KGL
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P + +Y+  I    + G   +A V+ N ML+ G+ P   L  IL
Sbjct: 665 TPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 205/435 (47%), Gaps = 3/435 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  + ++I          +A+  F  M   G  P  ++++ L+  + K      G+    
Sbjct: 283 SYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLV 342

Query: 166 E-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E  R  +  ++ S+  L+ G C AG +  AFE+  +L++ GF  + ++Y+ ++ GCC++ 
Sbjct: 343 EMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D+E    L+  +     V   + Y+ LI    ++   K+  E +E M  +G+ P++ T  
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCT 462

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+H + NEG + E F   D++R   V  N+ TY  +I GLCK  +  +   +   M   
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P+ + Y+ +IDGF  A +  +AFRL+ ++   G  P++ TY  LI            
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L + M   G+TP  + YT LI  + +  +M+ A E++  M+  G S D + Y  LI G
Sbjct: 583 MTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGG 642

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
                 M  A      M    L P  V Y  +I GY K G+  +A+ +   M + G+ P+
Sbjct: 643 FSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702

Query: 525 IASYSSTIGVLCQDG 539
            A  S  +G L  DG
Sbjct: 703 -AKLSCILG-LGNDG 715



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 196/395 (49%), Gaps = 2/395 (0%)

Query: 174 DVYSFGILIKGCCEAGDL--NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           ++YS+ +L+        L   +A E+L+++E  G  PN   Y + + G C+   ++ A  
Sbjct: 210 NIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWN 269

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
             + + + G     + +  +I G   +G      E ++ M+  G  P +++Y+ L+   C
Sbjct: 270 FLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLC 329

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G V  G+ +  EM    +  N+V+Y++L+ GLC+  RV+ A  L  ++K  G   + I
Sbjct: 330 KQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHI 389

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y+ ++ G C   + +  + L+N +  +   P    Y+ LI A+ +    K A ++   M
Sbjct: 390 VYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              GI P+ VT TIL+  F     + +AF     +++ G  P++ TY V+I+GLC     
Sbjct: 450 ICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKP 509

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +   +F  M +    P+ V+Y+++I G+ K  +   A RL  +M ++G  PNI +Y+S 
Sbjct: 510 NDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  LC D K PE   L   M+  GL P   LY  L
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 8/362 (2%)

Query: 215 SLIDGCCKNGD--IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           S++D C   G    + A ML   +G  G +     Y  +I    +  + +D    Y + +
Sbjct: 113 SVVDHCGNAGPELFQLAPMLASNLG--GSMTLPQVYATVIRVFVELSMFEDALVTYVEAK 170

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK--EMR 330
             GV   L   N L+       ++     LFD+M+    + N+ +Y+ L+       ++ 
Sbjct: 171 KVGVE--LQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLC 228

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA+ LL +M++ G+ PN  TY   + G C A +   A+     L   G   +   +N 
Sbjct: 229 LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNA 288

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I  F   G    A ++   M++ G  P   +Y+IL+D   +  D+   + M   M ++G
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +P++ +Y  L+HGLC  G ++ A +LF  + +   + + +VY++++ G C+  +     
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            L  +M     VP+  +YSS I   C+  +  EA  +   M+  G+ P+V    IL    
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGF 468

Query: 571 NN 572
           +N
Sbjct: 469 SN 470


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 217/429 (50%), Gaps = 1/429 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F ++L  G  P + TFN+L+  +       +   F  +   +   LD  S+G LI G C+
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G +  A ++L +++     PN V+Y  +ID  CK   +  A  L+ ++    +     T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
              LI G    G  K+      KM L  ++P +YT++ L+  +C EGKV E   +     
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +++  +VVTYN+L+ G C    + +A+ + D M   G+  NV +Y  +I+G C     D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF +++     P+VVTYN LI    K G       LV EM +RG  P+ +TY  ++
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  ++  ++KA  + + ++  G  PD+YTY VLI GLC  G +++A K+F  +      
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            +   Y +MI G+C +G    AL LL +M + G +PN  +Y   I  L +  +   AE L
Sbjct: 488 LDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKL 547

Query: 548 LNQMLKLGL 556
           L +M+  GL
Sbjct: 548 LREMIARGL 556



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 192/396 (48%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F ILI    + G  + +F V  ++ + GF PN + + +LI G C  G I +A    
Sbjct: 104 DFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFH 163

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+   G    Q +Y  LI GL K G      +  +++    V P+   YN +I   C  
Sbjct: 164 DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKA 223

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V++ F L+ +M  + ++ +  T N+LI G C   +++EA  LL +M +  I+P + T+
Sbjct: 224 KLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTF 283

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + L+D FC  G+  +A  +            VVTYN L+  +        A D+   M  
Sbjct: 284 SILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMAS 343

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  +  +YT +I+   +   +++A  ++  M+     P+V TY  LI GL   G +  
Sbjct: 344 RGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISC 403

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             KL + M +    PN + YN ++   CK  +  +A+ LL  + ++G+ P++ +Y+  I 
Sbjct: 404 VLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIK 463

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LCQ GK  +A+ +   +L  G    V  Y ++ + 
Sbjct: 464 GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQG 499



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 189/395 (47%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  F  ++    +A   + A  +  Q+E  G   +   +  LI+   + G    +  +F 
Sbjct: 70  IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFG 129

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI + G      T+  LI GL   G       F++K+   G      +Y  LI+  C  G
Sbjct: 130 KILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVG 189

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +++   +L   +  + V  N V YN +I  +CK   V +A  L  QM    ISP+  T N
Sbjct: 190 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCN 249

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC  G+  +A  L +++     +P + T+++L+ AF K G  K A  ++    ++
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            I    VTY  L+D +    ++ KA +++  M   G   +V +Y  +I+GLC    + EA
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M   K+ PN V YN +I G  K G     L+L+ EM+++G  PNI +Y+S +  
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDA 429

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC++    +A  LL  +   G++P +  Y +L + 
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 34/249 (13%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S   +   + Y ++I+   K ++ D+A+  F +M    + P   T+NS           
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNS----------- 390

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                                  LI G  + G ++   ++++++ + G  PN++ Y S++
Sbjct: 391 -----------------------LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           D  CKN  +++A  L   + + G+    +TYTVLI GL ++G  +D  + +E + + G +
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
             +YTY  +I  +C +G       L  +M       N  TY  +I  L ++     AE+L
Sbjct: 488 LDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKL 547

Query: 338 LDQMKMAGI 346
           L +M   G+
Sbjct: 548 LREMIARGL 556


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 251/527 (47%), Gaps = 7/527 (1%)

Query: 20  MAKLPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           ++ L P  A + F   +R+ G +HT  S + +L+LL  + +  ++     L+L +IS   
Sbjct: 61  VSPLDPATALAFFECVARRPGFRHTAASHAALLQLLARRRAPANY---DKLVLSMISCSG 117

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           T+             +        V   + Y   + + L+  +++     +  ++  G+ 
Sbjct: 118 TAEDVREAVDAIQAIRRV-GGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLL 176

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P + T+N++++   K  S      +F   R   +++D Y+   L+ G C   DL KA  +
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  +  MG   N   YT LI G C+   +  A +L   +   G     HTYT+LI GL K
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G   D     ++M L GV PS++TYN +I  YC  G++ +   +   M       +  T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN+LI GLC   ++ EAE LL+     G +P VIT+  LI+G+C A   D A R+ + + 
Sbjct: 357 YNSLIYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S+     +  Y VLI    K    K A + + EM   G+ P+ VTYT +ID + +   + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A E++ LM+  G  P+ +TYG LI+GL     + +A  L   M E  + P  + Y  +I
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLI 535

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            G CK+     A RL   M + GL P+  +Y+     LC+ G+  EA
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 225/493 (45%), Gaps = 24/493 (4%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++F +   P   +  Y SIID + K  +   AL  F  M   G  P + T+ SL+  +
Sbjct: 446 LNEMFANGLAPNVVT--YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           I+     K     ++     +   V ++  LI+G C+  + + AF +   +E+ G +P+ 
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563

Query: 211 VIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
             Y  L D  CK+G  E A   L RK    G+V T+ TYT L+ G  K G         E
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM   G    LYTY+ L+   C + K++E   + D+M    V CN+V Y  +I  + KE 
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +   A+ L ++M  +G  P+  TY   I  +C  G  ++A  L  +++ +G +P VVTYN
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD--------------- 434
           + I      G    A   ++ M +    P+  TY +L+  F++                 
Sbjct: 740 IFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNW 799

Query: 435 -DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++   +++   M K G +P V TY  +I G C    ++EA  L + M    + PN+ +Y
Sbjct: 800 IELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 859

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            M+I   C      +A+  + +M E G  P + SY   I  LC +G +  A+ L   +L 
Sbjct: 860 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 554 LGLKPSVSLYNIL 566
           +    +   + IL
Sbjct: 920 MDYNHNEVAWKIL 932



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 214/468 (45%), Gaps = 38/468 (8%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           GV P   T+N+++    KS              +N C    D +++  LI G C  G L+
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNP--DDWTYNSLIYGLC-GGKLD 370

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A E+LN     GF+P V+ +T+LI+G CK   I+ A  +   +           Y VLI
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K    K+  E   +M  NG++P++ TY  +I  YC  G V    ++F  M H    
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N  TY +LI GL ++ ++ +A  L+ +M+  GI+P VITY  LI G C   E D AFRL
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 550

Query: 373 FNQLKSNGQSP--------------------------------SVVTYNVLIRAFSKAGN 400
           F  ++ NG +P                                + VTY  L+  FSKAGN
Sbjct: 551 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +  A+ L+ +M   G      TY++L+ +  +   + +A  +   M  SG   ++  Y +
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I  +  +G    A  LFN M  +  +P+   Y + I  YCK G    A  L+GEM   G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           + P++ +Y+  I      G    A   L +M+    +P+   Y +L +
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLK 778



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 185/375 (49%), Gaps = 1/375 (0%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ + L + G  P+ V Y ++I   CK G +  A   F  + E G+    +T   L+ G 
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            +    +        M L G   + Y+Y  LI   C    V E   L   M H   + N+
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY  LI GLCKE R+ +A  LLD+M + G+ P+V TYN +IDG+C +G    A  +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++ NG +P   TYN LI      G    A +L+     RG TP+ +T+T LI+ + +++ 
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A  + S M  S    D+  YGVLI+ L  K  +KEA +  N M+   L PN V Y  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I GYCK G    AL +   M  +G  PN  +Y S I  L QD K  +A  L+ +M + G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 556 LKPSVSLYNILYRAK 570
           + P V  Y  L + +
Sbjct: 524 ITPGVITYTTLIQGQ 538



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 228/520 (43%), Gaps = 60/520 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y S+I      +L D+A    +  +  G  P   TF +L+    K+   D      S   
Sbjct: 357 YNSLIYGLCGGKL-DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + CK  LD+ ++G+LI    +   L +A E LN++   G +PNVV YTS+IDG CK G 
Sbjct: 416 SSNCK--LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  +F+ +   G      TY  LI GL ++           KMQ +G++P + TY  
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTT 533

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C + +    F+LF+ M    +  +   YN L   LCK  R +EA   L +    G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KG 590

Query: 346 ISPNVITYNKLIDGFCDAGETD-----------------------------------KAF 370
           +    +TY  L+DGF  AG TD                                   +A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            + +Q+  +G   ++V Y ++I    K G    A  L  EM   G  PS  TYT+ I S+
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +E+A  +   M++ G +PDV TY + I+G    G +  A      M +   EPN 
Sbjct: 711 CKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNC 770

Query: 491 VVYNMMIFGYCKEG--NSY--------------RALRLLGEMNEKGLVPNIASYSSTIGV 534
             Y +++  + K    N++                 +LL  M + GL P + +YSS I  
Sbjct: 771 WTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAG 830

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            C+  +  EA VLL+ ML   + P+  +Y +L +   +I+
Sbjct: 831 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 224/507 (44%), Gaps = 49/507 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+ + K+   D AL     M+ S  +     +  L+  +IK C   +     +E  
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +V ++  +I G C+ G +  A EV   +E  G  PN   Y SLI G  ++  + 
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  K+ E G+     TYT LI G  K     + F  +E M+ NG++P    YN L 
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 288 HEYCNEGKVSEGFK--------------------------------LFDEMRHREVACNV 315
              C  G+  E +                                 L ++M +     ++
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+ L+  LCK+ ++ EA  +LDQM ++G+  N++ Y  +I      G+ D A  LFN+
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + S+G  PS  TY V I ++ K G  + A  L+ EME  G+TP  VTY I I+       
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGY 750

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLI-HGLCM---KGNMKEASKLFN------------ 479
           +++AF     M  +   P+ +TY +L+ H L M     +  + S ++N            
Sbjct: 751 IDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLE 810

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +  L P  V Y+ +I G+CK      A  LL  M  K + PN   Y+  I   C   
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +A   +  M++ G +P +  Y+ L
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQLESYHYL 897



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 24/407 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  + DA  KS  +++A  +   ++  GV     T+ SL+    K+ + D   +   +  
Sbjct: 566 YNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              CK   D+Y++ +L++  C+   LN+A  +L+Q+   G   N+V YT +I    K G 
Sbjct: 623 NEGCKA--DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + AK LF ++   G   +  TYTV I    K G  ++      +M+ +GV+P + TYN 
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI----------------CGLCKEM 329
            I+   + G +   F     M       N  TY  L+                 G+   +
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWI 800

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +    +LL++M   G++P V+TY+ +I GFC A   ++A  L + +     SP+   Y 
Sbjct: 801 ELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 860

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           +LI+          A   V +M E G  P   +Y  LI       D ++A  ++  +   
Sbjct: 861 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            ++ +   + +L  GL   G++   S+L  +M       +   Y+M+
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 182/427 (42%), Gaps = 26/427 (6%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK-IISGRITSSS---- 82
           AF LF    + GL    Q+ +++   L    S  +  A   L+ K ++  ++T +S    
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCK--SGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           F+          L     N   K+ LY    ++ A  K +  ++AL    QM  SGV+  
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              +  ++  +IK    D     F+E      +    ++ + I   C+ G + +A  ++ 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++E  G +P+VV Y   I+GC   G I+RA    +++ +        TY +L+    K  
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 260 LQKDGF----------------EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           L    +                +  E+M  +G++P++ TY+ +I  +C   ++ E   L 
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  ++++ N   Y  LI   C      +A   +  M   G  P + +Y+ LI G CD 
Sbjct: 845 DHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D+A  LF  L     + + V + +L     KAG+    S L+  M+ R       +Y
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 424 TILIDSF 430
           ++L DS 
Sbjct: 965 SMLTDSI 971



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 7/241 (2%)

Query: 331 VQEAERLLDQMKMAG-----ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           V+EA   +  ++  G     +SP    YN  +        T+   +L++ L   G  P  
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKC--YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDT 179

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN +I A+ K G+  +A      + E G+     T   L+  + R+ D+ KA  +  +
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G   + Y+Y +LI GLC    ++EA  L   M       N   Y ++I G CKEG 
Sbjct: 240 MPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGR 299

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
            + A  LL EM  +G+VP++ +Y++ I   C+ G+  +A  +   M + G  P    YN 
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359

Query: 566 L 566
           L
Sbjct: 360 L 360



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 112/310 (36%), Gaps = 58/310 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----GWLFF 164
           Y  II   +K    D A   F++M+ SG +P + T+    +F+   C   +      L  
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT---VFISSYCKIGRIEEAEHLIG 724

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ------------------------ 200
              R  V  DV ++ I I GC   G +++AF  L +                        
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 201 ------------------------LEEM---GFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
                                   LE M   G +P VV Y+S+I G CK   +E A +L 
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +    +   +  YT+LI       L      F   M   G  P L +Y+ LI   C+E
Sbjct: 845 DHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G       LF ++   +   N V +  L  GL K   V    +LL  M       +  +Y
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 354 NKLIDGFCDA 363
           + L D   +A
Sbjct: 965 SMLTDSIREA 974



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 5/200 (2%)

Query: 375 QLKSNGQSPSVVTYNVL--IRAFSKAGNSKMASDLVREMEERG---ITPSEVTYTILIDS 429
           QL +  ++P+     VL  I     A + + A D ++ +   G   +  S   Y + + S
Sbjct: 94  QLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRS 153

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +R D  E   ++YS + + G  PD  TY  +I   C KG++  A + F  + E+ ++ +
Sbjct: 154 LLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMD 213

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
               N ++ GYC+  +  +A  LL  M   G   N  SY+  I  LC+     EA VL+ 
Sbjct: 214 TYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVF 273

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            M+  G   ++  Y +L + 
Sbjct: 274 MMVHDGCSLNLHTYTLLIKG 293


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 260/559 (46%), Gaps = 25/559 (4%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLS-----------KMSSHSHAAAQTLILK 72
           P  A   F+WA  Q G +H   S + +L +L+            K   HS  +   +  K
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           I+      +    R+L   L  L   S  P     ++  +I    K    DQA+  F  M
Sbjct: 67  ILIRGNCKAGQAMRALE-FLRALDEFSVAP--DVYIFNVLIHGLFKDGNPDQAVKLFENM 123

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAG 189
             S V+P   T+N+++  + KS + +K      E      K   D+ ++  LI     A 
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            + +A     +++  G +P+V+    L+ G CK+GD+E A  +   +   G V    TY 
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I  L   G   +  E  + M     SP L T+N L+  +C  G +    ++ +EM   
Sbjct: 244 SIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +V+TY  L+ GLC+  +VQ A  LL+++   G  P+VI Y  L+DG C +GE ++A
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +L  ++   G    VV Y+ L+  + +AGN   A +++ EM    + P   TY I++  
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++   + KA  + S +   G+ PDV TY  LI GLC    ++EA  L + M      PN
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPN 480

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           DV    ++FG C+ G    A  L+ EM+ K   PN+  Y+S I  LC+  +  +A ++L+
Sbjct: 481 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLD 540

Query: 550 QMLKLGLKPSVSLYNILYR 568
            M   G    V+L +  YR
Sbjct: 541 AMRGQG----VALDDFAYR 555



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 156/364 (42%), Gaps = 41/364 (11%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           + PV     Y SII A   +    +A      M      P   TFN+LL    K+    +
Sbjct: 233 AGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 289

Query: 160 GWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             L   E  C+  +  DV ++ IL+ G C  G +  AF +L ++   G+ P+V+ YTSL+
Sbjct: 290 A-LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 348

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK+G+IE A  L +++   G       Y+ L+ G  + G      E   +M    + 
Sbjct: 349 DGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMV 408

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L+TYN ++     +G +S+   L  ++  R    +VVTYNTLI GLCK  RV+EA  L
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468

Query: 338 LDQMKMAGI-----------------------------------SPNVITYNKLIDGFCD 362
            D+M   G                                    +PNV+ Y  LIDG C 
Sbjct: 469 ADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 528

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           +   D A  + + ++  G +     Y  LI + S  G    A  +  EM  RG  P   T
Sbjct: 529 SDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588

Query: 423 YTIL 426
              L
Sbjct: 589 SKTL 592


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 232/467 (49%), Gaps = 9/467 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++  +I    K+     AL YF  +  +   P   TFN L+  ++KS   ++ +  F   
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 168 RCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
               +   +V ++  +I G C+ G L++A E+L+ + E G  PNV+ Y+ L++G CK G 
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++   L +++   G       Y  L+ GL K+    +  E  + M  +G  P++ TYN 
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNS 246

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  +C   +V   F+L   M  R    +V+ YNT+I GLC++ R+ +A+ LL QM  A 
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRL------FNQLKSNGQSPSVVTYNVLIRAFSKAG 399
             P+VITY+ +IDG C     D  ++L         +K  G  P+  TY V+I    +A 
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
            S+ A  L+R M +  + P   +++++I S  +S D++ A++++ +M +    P+   Y 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI GL   G + +A ++F  M E+   P    YN ++ G C  G    A+R++  M  K
Sbjct: 427 ALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              P+ ASY + I  LC+     EA  L   +   G    V +YN+L
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
            N  L  ++++    +    F E RC    + +++G LI G C+AG L++A+E+L+++ +
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCVP--NEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P V ++  +I G CK G    A   F+ +          T+ +L+  L K+G  ++
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 264 GFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            F+ +E M  +    P++ TY  +I+  C +GK+    +L D M       NV+TY+ L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCK  R  +   LL +M   G  P+VI YN L++G C +   D+A  L   +  +G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTYN L+  F ++     A  L++ M ERG  P  + Y  +I    R   ++ A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLC------MKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
              M  +   PDV TY  +I GLC          ++ A ++   M +T   PN   Y ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G C+   S +AL LL  M +  +VP+++S+S  IG LC+      A  +   M +   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 557 KPSVSLYNIL 566
           KP+   Y  L
Sbjct: 419 KPNPVAYAAL 428



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 224/469 (47%), Gaps = 9/469 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
           Y S+I    K+   DQA     +M D G+ P     N ++  + K+  F     +F +  
Sbjct: 33  YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDI 226
             K   D+ +F IL+    ++G + +AF++   +       PNVV YT++I+G CK+G +
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +RA  L   + E G      TY+VL+ GL K G    GF   ++M   G  P +  YN L
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C   ++ E  +L   M        VVTYN+L+   C+  +V  A RL+  M   G 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS----- 401
            P+VI YN +I G C     D A  L  Q+ +    P V+TY+ +I    K         
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 402 -KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A +++  M++ G  P+  TY ++I+   R+   ++A  +   M  S   PD+ ++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I  LC   ++  A K+F  M E + +PN V Y  +I G  K G   +A+R+  E+  + 
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVES 451

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             P +A+Y+S +  LC  G+  EA  ++  M+     P  + Y  L R 
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 8/383 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +++   K+  +D+      +M   G +P    +N+LL  + KS   D+   L     
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI 233

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R      V ++  L++  C +  +++AF ++  + E G  P+V+ Y ++I G C++  ++
Sbjct: 234 RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD 293

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN-GLQKD-----GFEFYEKMQLNGVSPSLY 281
            A+ L +++     V    TY+ +I GL K+  +  D       E  E M+  G  P+  
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAG 353

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  +I   C   K  +   L   M   EV  ++ +++ +I  LCK   +  A ++   M
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 PN + Y  LIDG    GE DKA R+F +L      P V TYN ++      G  
Sbjct: 414 SERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  +V  M  +   P   +Y  LI    R   +E+A+E++  ++  GF+ +V  Y VL
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532

Query: 462 IHGLCMKGNMKEASKLFNSMWET 484
           ++ LC K  + +A  + N + E 
Sbjct: 533 VNELCKKKRLSDAHGVANKLIEA 555



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 45/351 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF--- 164
           +Y ++++   KSR  D+AL     M+ SG  P   T+NSL+    +S   D+ +      
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           SE  C    DV ++  +I G C    L+ A  +L Q+      P+V+ Y+++IDG CK+ 
Sbjct: 268 SERGCPP--DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 225 DI------ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
            +      E A  +   + + G      TY V+I GL +    +       +M  + V P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN------------------------ 314
            L +++ +I   C    +   +K+F  M  RE   N                        
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 315 ----------VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
                     V TYN+++ GLC   R++EA R+++ M      P+  +Y  LI G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
             ++A+ LF  +++ G +  V  YNVL+    K      A  +  ++ E G
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G   +A +LF    E +  PN+  Y  +I G CK G   +A  LL EM ++G+ P +A +
Sbjct: 12  GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVH 68

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  I  LC+ G++ +A      +      P +  +NIL  A
Sbjct: 69  NGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDA 109


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 206/420 (49%), Gaps = 35/420 (8%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E +V +   LIKG C  G +++A +  +++  +GF  N V Y +LI+G CK G    A  
Sbjct: 139 EPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQ 198

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L R++    +      Y  +I  + K  L  + F+ Y +M   G+SP + TYN LI  +C
Sbjct: 199 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFC 258

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK+ +   LF++M    +  NV T+N L+ G CKE R++EA+ +L  M   GI P+V 
Sbjct: 259 IVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVF 318

Query: 352 TYNKLID-----------------------------------GFCDAGETDKAFRLFNQL 376
           TYN L+D                                   GFC   + D+A  LF ++
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             N   P VVTYN LI    K G    A  LV EM +RG+   ++TY  ++D+  ++  +
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 438

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           +KA  + + M+  G  PD+ TY  L+ GLC  G +++A  +F  +       +  +Y  M
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAM 498

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+C  G    +L LL +M E G +PN  +Y   I  L    +  +AE LL +M+  GL
Sbjct: 499 IQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 203/396 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+    ILI    + G    +F VL ++ +MG+ PNV+  T+LI G C  G I +A    
Sbjct: 106 DLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFH 165

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+  LG    + +Y  LI GL K G      +   ++    V P++  YN +I   C  
Sbjct: 166 DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 225

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V+E F L+ EM  + ++ +VVTYN LI G C   ++++A  L ++M    I+PNV T+
Sbjct: 226 KLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTF 285

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+DGFC      +A  +   +   G  P V TYN L+  +        A  +   + +
Sbjct: 286 NILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ 345

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+ P+  +Y+I+I  F +   +++A  ++  M  +   PDV TY  LI GLC  G +  
Sbjct: 346 RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY 405

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KL + M +  +  + + YN ++   CK     +A+ LL +M ++G+ P+I +Y++ + 
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVD 465

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC++G+  +A ++   +L  G    V++Y  + + 
Sbjct: 466 GLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 179/351 (50%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+ +V  +  +I   C+   +N+AF++ +++   G SP+VV Y +LI G C  G ++ A 
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF K+    +    +T+ +L+ G  K    K+       M   G+ P ++TYN L+  Y
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +V++   +F+ +  R V  N+ +Y+ +I G CK  +V EA  L  +M    I P+V
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LIDG C  G+   A +L +++   G     +TYN ++ A  K      A  L+ +
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M++ GI P   TYT L+D   ++  +E A  ++  +   G+  DV  Y  +I G C  G 
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
             E+  L + M E    PN V Y ++I     +  + +A +LL EM  +GL
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 186/369 (50%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           L +    P++  +  ++    K+        L R++   G+ +     ++LI    + G 
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
               F    K+   G  P++ T   LI   C +G++ +  +  D++       N V+Y T
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI GLCK  +   A +LL ++    + PNV+ YN +ID  C     ++AF L++++ S G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            SP VVTYN LI  F   G  K A+DL  +M    I P+  T+ IL+D F +   +++A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            + ++M K G  PDV+TY  L+   C+   + +A  +FN++ +  + PN   Y++MI G+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK      A+ L  EM+   ++P++ +Y+S I  LC+ GK   A  L+++M   G+    
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 561 SLYNILYRA 569
             YN +  A
Sbjct: 423 ITYNSILDA 431


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 232/464 (50%), Gaps = 6/464 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---EN 167
           +  A+ K+ L ++A+  F +M+D    R    +FNS+L  +I+   F +   F+      
Sbjct: 121 VFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGG 180

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +V SF ++IK  C+ G +++A EV  ++      P+V  Y +L+DG CK   I+
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +L  ++   G   +  T+ VLI GL K G      +  + M L G  P+  TYN +I
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +GK+ +   L D M   +   N VTY TLI GL K+ R  +   LL  ++  G  
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   Y+ LI G     ++++A  L+ ++   G  P++V Y+ LI    + G    A ++
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G TP+  TY+ LI  F ++ + +KA  ++  M K+   P+   Y VLIHGLC 
Sbjct: 421 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 480

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM--NEKGLVPNI 525
            G ++EA  ++  M    L P+ V Y+ MI G C  G+    L+L  EM   E    P++
Sbjct: 481 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 540

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+  +  LC+      A  LLN ML  G  P +   NI   A
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 584



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 208/415 (50%), Gaps = 6/415 (1%)

Query: 156 SFDKGWLFFSENRCKVELDVY---SFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVV 211
           S D G LF   +R K E  V+   +F ++ +   +A    KA E+  ++ +E      V 
Sbjct: 93  SGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 152

Query: 212 IYTSLIDGCCKNGDIERAKMLFR--KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
            + S+++   + G   RA   +     G+  +     ++ ++I  + K GL     E + 
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M +    P ++TY  L+   C E ++ E   L DEM+      + VT+N LI GLCK+ 
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +    +L+D M + G  PN +TYN +I+G C  G+ DKA  L +++ ++   P+ VTY 
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI    K G S     L+  +EERG   +E  Y+ LI    + +  E+A  ++  M + 
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P++  Y  LI GLC +G + EA ++   M      PN   Y+ +I G+ K GNS +A
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +R+  EM +   VPN   YS  I  LC+DGK  EA ++   ML  GL+P V  Y+
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 507



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 19/436 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D   K    D+A+    +M   G  P S TFN L+  + K     +         
Sbjct: 226 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 285

Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K  V  +V ++  +I G C  G L+KA  +L+++      PN V Y +LI+G  K G  
Sbjct: 286 LKGCVPNEV-TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRS 344

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
                L   + E G  A ++ Y+ LI GLFK    ++    ++KM   G  P++  Y+ L
Sbjct: 345 VDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 404

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EGK+ E  ++  EM ++    N  TY++LI G  K    Q+A R+  +M     
Sbjct: 405 IDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC 464

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN I Y+ LI G C+ G+  +A  ++  +   G  P VV Y+ +I     AG+ ++   
Sbjct: 465 VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK 524

Query: 407 LVREM--EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           L  EM  +E    P  VTY IL+ +  + + +  A ++ + M   G +PD+ T  + ++ 
Sbjct: 525 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 584

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L  K N  +  + F      +L     +                A +++  M +K L PN
Sbjct: 585 LREKLNPPQDGREFLDELVVRLHKRQRIVG--------------AAKIIEVMLQKFLPPN 630

Query: 525 IASYSSTIGVLCQDGK 540
            +++   I  LC+  K
Sbjct: 631 ASTWERIIPELCKPKK 646



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 38/345 (11%)

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACN---V 315
           LQ + + F    Q+        T+  LI  Y N G     F++FD M R R V      +
Sbjct: 60  LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFI 119

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKM-------------------------------- 343
           + +         E  ++   R++D+ +                                 
Sbjct: 120 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 179

Query: 344 --AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               ISPNV+++N +I   C  G  D+A  +F ++      P V TY  L+    K    
Sbjct: 180 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 239

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+ EM+  G  PS VT+ +LI+   +  DM +  ++   M   G  P+  TY  +
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+GLC+KG + +A  L + M  +K  PNDV Y  +I G  K+G S   + LL  + E+G 
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             N  +YS+ I  L ++ K  EA  L  +M++ G +P++ +Y+ L
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 404



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 23/260 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           +Y ++ID   +    D+A     +M++ G  P + T++SL+    K+ +  K    W   
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           ++N C      YS  +LI G CE G L +A  +   +   G  P+VV Y+S+I G C  G
Sbjct: 460 AKNNCVPNEICYS--VLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 517

Query: 225 DIERAKMLFRKI--GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            +E    LF ++   E        TY +L+  L K        +    M   G +P L T
Sbjct: 518 SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577

Query: 283 YNCLIHEYCNE-GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            N  ++    +     +G +  DE               L+  L K  R+  A ++++ M
Sbjct: 578 CNIFLNALREKLNPPQDGREFLDE---------------LVVRLHKRQRIVGAAKIIEVM 622

Query: 342 KMAGISPNVITYNKLIDGFC 361
               + PN  T+ ++I   C
Sbjct: 623 LQKFLPPNASTWERIIPELC 642



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           + +N V     Y  +I    +     +A+  +  ML  G+RP    ++S++  +  + S 
Sbjct: 460 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519

Query: 158 DKGWLFFSENRCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
           + G   F+E  C+    + DV ++ IL++  C+   ++ A ++LN + + G +P+++
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 576


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 232/467 (49%), Gaps = 9/467 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++  +I    K+     AL YF  +  +   P   TFN L+  ++KS   ++ +  F   
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 168 RCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
               +   +V ++  +I G C+ G L++A E+L+ + E G  PNV+ Y+ L++G CK G 
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++   L +++   G       Y  L+ GL K+    +  E  + M  +G  P++ TYN 
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNS 246

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  +C   +V   F+L   M  R    +V+ YNT+I GLC++ R+ +A+ LL QM  A 
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRL------FNQLKSNGQSPSVVTYNVLIRAFSKAG 399
             P+VITY+ +IDG C     D  ++L         +K  G  P+  TY V+I    +A 
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
            S+ A  L+R M +  + P   +++++I S  +S D++ A++++ +M +    P+   Y 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI GL   G + +A ++F  M E+   P    YN ++ G C  G    A+R++  M  K
Sbjct: 427 ALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              P+ ASY + I  LC+     EA  L   +   G    V +YN+L
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
            N  L  ++++    +    F E RC    + +++G LI G C+AG L++A+E+L+++ +
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCVP--NEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P V ++  +I G CK G    A   F+ +          T+ +L+  L K+G  ++
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 264 GFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            F+ +E M  +    P++ TY  +I+  C +GK+    +L D M       NV+TY+ L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCK  R  +   LL +M   G  P+VI YN L++G C +   D+A  L   +  +G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTYN L+  F ++     A  L++ M ERG  P  + Y  +I    R   ++ A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLC------MKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
              M  +   PDV TY  +I GLC          ++ A ++   M +T   PN   Y ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G C+   S +AL LL  M +  +VP+++S+S  IG LC+      A  +   M +   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 557 KPSVSLYNIL 566
           KP+   Y  L
Sbjct: 419 KPNPVAYAAL 428



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 224/469 (47%), Gaps = 9/469 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
           Y S+I    K+   DQA     +M D G+ P     N ++  + K+  F     +F +  
Sbjct: 33  YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDI 226
             K   D+ +F IL+    ++G + +AF++   +       PNVV YT++I+G CK+G +
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +RA  L   + E G      TY+VL+ GL K G    GF   ++M   G  P +  YN L
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C   ++ E  +L   M        VVTYN+L+   C+  +V  A RL+  M   G 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS----- 401
            P+VI YN +I G C     D A  L  Q+ +    P V+TY+ +I    K         
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 402 -KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A +++  M++ G  P+  TY ++I+   R+   ++A  +   M  S   PD+ ++ +
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I  LC   ++  A K+F  M E + +PN V Y  +I G  K G   +A+R+  E+  + 
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVES 451

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             P +A+Y+S +  LC  G+  EA  ++  M+     P  + Y  L R 
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 8/383 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +++   K+  +D+      +M   G +P    +N+LL  + KS   D+   L     
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI 233

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R      V ++  L++  C +  +++AF ++  + E G  P+V+ Y ++I G C++  ++
Sbjct: 234 RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD 293

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN-GLQKD-----GFEFYEKMQLNGVSPSLY 281
            A+ L +++     V    TY+ +I GL K+  +  D       E  E M+  G  P+  
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAG 353

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  +I   C   K  +   L   M   EV  ++ +++ +I  LCK   +  A ++   M
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 PN + Y  LIDG    GE DKA R+F +L      P V TYN ++      G  
Sbjct: 414 SERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  +V  M  +   P   +Y  LI    R   +E+A+E++  ++  GF+ +V  Y VL
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532

Query: 462 IHGLCMKGNMKEASKLFNSMWET 484
           ++ LC K  + +A  + N + E 
Sbjct: 533 VNELCKKKRLSDAHGVANKLIEA 555



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 45/351 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF--- 164
           +Y ++++   KSR  D+AL     M+ SG  P   T+NSL+    +S   D+ +      
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           SE  C    DV ++  +I G C    L+ A  +L Q+      P+V+ Y+++IDG CK+ 
Sbjct: 268 SERGCPP--DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 225 DI------ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
            +      E A  +   + + G      TY V+I GL +    +       +M  + V P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN------------------------ 314
            L +++ +I   C    +   +K+F  M  RE   N                        
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 315 ----------VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
                     V TYN+++ GLC   R++EA R+++ M      P+  +Y  LI G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
             ++A+ LF  +++ G +  V  YNVL+    K      A  +  ++ E G
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L   G   +A +LF    E +  PN+  Y  +I G CK G   +A  LL EM ++G+ P 
Sbjct: 8   LVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A ++  I  LC+ G++ +A      +      P +  +NIL  A
Sbjct: 65  VAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDA 109


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 205/392 (52%), Gaps = 5/392 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +  ++++  C    ++ A E++ ++   G + N + Y++L+DG CK   ++ A  L 
Sbjct: 73  DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALV 132

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + E G   T  TY  +I G  +     +   F E+M   G  P + TY  LI  +C  
Sbjct: 133 ETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKS 192

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V  G +L  E+  R    ++VTY+T+I GLCK  R+++A  + ++M  A   P  ITY
Sbjct: 193 RDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITY 249

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI G+C AG+ D+A RL  ++  +  +P VVTY  L+ AF K G    A +L ++M  
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA 309

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             ++P  VT+T L+D       ME A E+   + + G  P +YTY  ++ G C    +++
Sbjct: 310 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRK 369

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVP-NIASYSST 531
           A +L          PN V YN+++ G C+ G + +AL+ L ++N E G  P ++A Y+  
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 429

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +  LC+DG+  +A     +M++ G  P+ + +
Sbjct: 430 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 210/434 (48%), Gaps = 10/434 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFG 179
           D A     +ML  G+   + T+++L+  + K    D+        +E  C     V ++ 
Sbjct: 91  DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPT--VVTYN 148

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            +I G C A  +++A   + Q+   G  P+++ YT+LI G CK+ D+ R   L  ++   
Sbjct: 149 SIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR 208

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY+ +I GL K G  +D  + +E+M     +P+  TYN LI  YC  G + E 
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 265

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            +L  +M   + A +VVTY TL+   CK  R+ +A  L  QM    +SP+V+T+  L+DG
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G  + A  L  ++   G  P++ TYN ++  + KA   + A +LV +   RG  P+
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385

Query: 420 EVTYTILIDSFVRSDDMEKAFE-MYSLMQKSGFSP-DVYTYGVLIHGLCMKGNMKEASKL 477
            VTY IL+    R+   ++A + +  L  + G  P  V  Y +++  LC  G   +A + 
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           +  M +    P    +  ++F  CK     +A  LL EM + G  P   +  + +   C+
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505

Query: 538 DGKWPEAEVLLNQM 551
            G   +A+ L +++
Sbjct: 506 AGMIQKADELASEL 519



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 213/421 (50%), Gaps = 10/421 (2%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++N +T    Y +++D   K    D+A+     M + G  P   T+NS++    ++   D
Sbjct: 106 AANAIT----YSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +   F  +   +    D+ ++  LI G C++ D+ +  E+L ++   GF+P++V Y+++I
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK G +  A  +F    E+    T  TY  LI G  + G   +      KM  +  +
Sbjct: 222 DGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA 278

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P + TY  L+  +C  G++ + ++LF +M   +++ +VVT+ +L+ GLC E R+++A  L
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L+++   G  P + TYN ++DG+C A +  KA  L    +S G  P+ VTYN+L+    +
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398

Query: 398 AGNSKMASDLVREM-EERGITPSEVT-YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           AG +  A   + ++  E G  P+ V  Y I++D+  R    + A + Y  M + G+ P  
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  ++  LC     ++A +L   M +    P     + ++  YC+ G   +A  L  E
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518

Query: 516 M 516
           +
Sbjct: 519 L 519



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 197/398 (49%), Gaps = 5/398 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  L+ G  +A  L  A +VL ++      P+    T ++   C    ++ A+ L 
Sbjct: 38  DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 97

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+ A   TY+ L+ GL K     +     E M   G +P++ TYN +I  +C  
Sbjct: 98  EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRA 157

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +V E     ++M       +++TY  LI G CK   V     LL ++   G +P+++TY
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + +IDG C AG    A  +F ++     +P+ +TYN LI  + +AG+   A  L+ +M +
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
               P  VTYT L+ +F +   ++ A+E++  M  +  SPDV T+  L+ GLC +G M++
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   +      P    YN ++ GYCK     +A  L+ +   +G VPN  +Y+  + 
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394

Query: 534 VLCQDGKWPEAEVLLNQMLKLG--LKPSVSLYNILYRA 569
             C+ G+  +A   L+Q+   G     SV++Y I+  A
Sbjct: 395 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 186/366 (50%), Gaps = 14/366 (3%)

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-----TYTVLICGLFKNGL 260
            +P  +++  +I G C+ G +  A  ++R++ +       H     TYT L+ GL K   
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND------AHPPDFLTYTKLVHGLSKARR 54

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            +D  +  ++M      P   T   ++   C   +V +  +L +EM HR +A N +TY+ 
Sbjct: 55  LRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSA 114

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L+ GLCK  R+ EA  L++ M   G +P V+TYN +I GFC A   D+A     Q+ + G
Sbjct: 115 LVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P ++TY  LI  F K+ +     +L+ E+  RG TP  VTY+ +ID   ++  +  A 
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           +++  M     +P   TY  LI G C  G+M EA +L   M + K  P+ V Y  ++  +
Sbjct: 235 DIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G    A  L  +M    L P++ +++S +  LC +G+  +A  LL ++ + G  P++
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351

Query: 561 SLYNIL 566
             YN +
Sbjct: 352 YTYNCV 357



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 76  GRITSSSFTPRSL--------LCHLTQLFPS-------SSNPVTKSRLYESIIDAHLKSR 120
           G +T   FTP  +        LC   +L  +       S  P   +  Y S+I  + ++ 
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT--YNSLIGGYCRAG 260

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFG 179
             D+A+    +M+D    P   T+ +L+    K    D  +  F +    K+  DV +F 
Sbjct: 261 DMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT 320

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G C  G +  A E+L ++   G  P +  Y  ++DG CK   + +A+ L       
Sbjct: 321 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSR 380

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCNEGKVS 297
           G V    TY +L+ G  + G      ++ +++   G     S+  Y  ++   C +G+  
Sbjct: 381 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 440

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           +  + ++EM  R       T+ T++  LCK  + Q+A  LL++M   G +P   T + ++
Sbjct: 441 DAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500

Query: 358 DGFCDAGETDKAFRLFNQLK 377
             +C AG   KA  L ++L+
Sbjct: 501 SAYCRAGMIQKADELASELR 520


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 255/539 (47%), Gaps = 74/539 (13%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K  +Y+  I    K  + ++A   F  M+ SG+ P++  + SL+    +  +  +G+   
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E + + + +  Y++G ++KG C +GDL+ A+ ++ ++   G  PNVVIYT+LI    +N
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
                A  + +++ E G+      Y  LI GL K     +   F  +M  NG+ P+ +TY
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 284 NC-----------------------------------LIHEYCNEGKVSEGFKLFDEMRH 308
                                                LI+EYC +GKV E    +  M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           + +  +  TY  L+ GL K  +V +AE +  +M+  GI+P+V +Y  LI+GF   G   K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +F+++   G +P+V+ YN+L+  F ++G  + A +L+ EM  +G+ P+ VTY  +ID
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-------- 480
            + +S D+ +AF ++  M+  G  PD + Y  L+ G C   +++ A  +F +        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 481 --------MW-------ETKLE---------------PNDVVYNMMIFGYCKEGNSYRAL 510
                    W       E K E               PNDV YN+MI   CKEGN   A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M    L+P + +Y+S +    + G+  E   + ++ +  G++P   +Y+++  A
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 281/669 (42%), Gaps = 134/669 (20%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P K  S FNW   Q +  T Q +     L L   +  S   A +++ ++I      +   
Sbjct: 77  PSKLLSFFNWVDSQKV--TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVW 134

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              + C  +Q F   S+      L+  + D ++     ++A+F F   +   + PR +  
Sbjct: 135 SSIVRC--SQEFVGKSD---DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRC 189

Query: 145 NSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             LL  +++    D  W ++       V  DV ++ +LI   C AG++    +VL + E+
Sbjct: 190 KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249

Query: 204 ---------------------MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
                                 G  P    Y  LIDG CK   +E AK L  ++  LG+ 
Sbjct: 250 EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309

Query: 243 ATQHTYTVLICGLFKN-----------------------------------GLQKDGFEF 267
              HTY++LI GL K                                    G+ +     
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC- 326
           ++ M  +G+ P    Y  LI  YC E  V +G++L  EM+ R +  +  TY T++ G+C 
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 327 -----------KEM-----------------------RVQEAERLLDQMKMAGISPNVIT 352
                      KEM                       R  +A R+L +MK  GI+P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI G   A   D+A     ++  NG  P+  TY   I  + +A     A   V+EM 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 413 ERGITPSEV-----------------------------------TYTILIDSFVRSDDME 437
           E G+ P++V                                   TYT+L++   ++D ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A E++  M+  G +PDV++YGVLI+G    GNM++AS +F+ M E  L PN ++YNM++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+C+ G   +A  LL EM+ KGL PN  +Y + I   C+ G   EA  L ++M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 558 PSVSLYNIL 566
           P   +Y  L
Sbjct: 730 PDSFVYTTL 738



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 251/496 (50%), Gaps = 44/496 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I   L++     A+    +M + G+ P    +NSL+I + K+   D+   F  E 
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++ + +++G  I G  EA +   A + + ++ E G  PN V+ T LI+  CK G +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   +R + + G++    TYTVL+ GLFKN    D  E + +M+  G++P +++Y  L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +   G + +   +FDEM    +  NV+ YN L+ G C+   +++A+ LLD+M + G+
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
            PN +TY  +IDG+C +G+  +AFRLF+++K  G  P                       
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753

Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLV-REME---ERGITPSEVTYTILID 428
                      S   +N LI    K G +++ ++++ R M+   +R   P++VTY I+ID
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +  ++E A E++  MQ +   P V TY  L++G    G   E   +F+      +EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN-----IASYSSTIGVLCQDGKWPE 543
           + ++Y+++I  + KEG + +AL L+ +M  K  V +     I++  + +    + G+   
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933

Query: 544 AEVLLNQMLKLGLKPS 559
           AE ++  M++L   P 
Sbjct: 934 AEKVMENMVRLQYIPD 949



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 55/462 (11%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQL--FPSSSNPVTKSR---------LYESIID 114
           A++ +++++   +  ++FT  + +    +   F S+   V + R         L   +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
            + K     +A   +  M+D G+   + T+  L+  + K+   D     F E R K +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+S+G+LI G  + G++ KA  + +++ E G +PNV+IY  L+ G C++G+IE+AK L 
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL     TY  +I G  K+G   + F  +++M+L G+ P  + Y  L+   C  
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745

Query: 294 GKVSEGFKLF--------------------------------------DEMRHREVACNV 315
             V     +F                                      D    R    N 
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN +I  LCKE  ++ A+ L  QM+ A + P VITY  L++G+   G   + F +F++
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-----EERGITPSEVTYTILIDSF 430
             + G  P  + Y+V+I AF K G +  A  LV +M      + G   S  T   L+  F
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +  +ME A ++   M +  + PD  T   LI+  C+  N +
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 32/393 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF  L    C  G   KA  V+ ++ E  + P   +++S++          R    F   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIV----------RCSQEFVGK 147

Query: 237 GELGLVATQHTYTVLICG-LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
            + G++     + +L  G + K  +++  F F   M L  V P L     L+       +
Sbjct: 148 SDDGVL-----FGILFDGYIAKEYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNR 201

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +   + ++  M  R V  +V TY+ LI   C+   VQ  + +L + +    +  +     
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL----- 256

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
                      D A +L   +   G  P   TY+VLI    K    + A  L+ EM+  G
Sbjct: 257 ---------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           ++    TY++LID  ++  + + A  +   M   G +   Y Y   I  +  +G M++A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF+ M  + L P    Y  +I GYC+E N  +   LL EM ++ +V +  +Y + +  +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           C  G    A  ++ +M+  G +P+V +Y  L +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 48/326 (14%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F +M++ G+ P    +N LL    +S   +K      E   K +  +  ++  +I G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GDL +AF + ++++  G  P+  +YT+L+DGCC+  D+ERA  +F    + G  ++   
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAP 768

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGV-----SPSLYTYNCLIHEYCNEGKVSEGFKL 302
           +  LI  +FK G  +   E   ++ ++G       P+  TYN +I   C EG +    +L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID---- 358
           F +M++  +   V+TY +L+ G  K  R  E   + D+   AGI P+ I Y+ +I+    
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887

Query: 359 ------------------------------------GFCDAGETDKAFRLFNQLKSNGQS 382
                                               GF   GE + A ++   +      
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLV 408
           P   T   LI     + N ++ +D V
Sbjct: 948 PDSATVIELINESCISSNQRVEADAV 973


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 35/396 (8%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +++  +S G L     +    + A+    ++ + G+ P+V  +  L+   CK   I  A+
Sbjct: 186 LQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQ 245

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           +LF +IG+ GL                                    P++ ++N LI+ Y
Sbjct: 246 LLFGEIGKRGL-----------------------------------RPTVVSFNTLINGY 270

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G + +GF+L   M    V  +V TY+ LI GLCKE ++ +A +L  +M   G+ PN 
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +T+  LI+G C  G  D    ++ Q+   G  P V+TYN LI    K G+ + A  LV E
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M +RG+ P + TYT+LID   +  D+E A E+   M K G   D   +  LI G C +G 
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA +    M E  ++P+D  Y M+I G+CK+G+     +LL EM   G VP + +Y+ 
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  LC+ G+   A +LL+ ML LG+ P    YNIL
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 187/339 (55%), Gaps = 1/339 (0%)

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W F+ E   C    DV  F +L+   C+   +N+A  +  ++ + G  P VV + +LI+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK+G++++   L R + E  +     TY+VLI GL K G   D  + + +M   G+ P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  T+  LI+ +C  G+   G +++ +M  + V  +V+TYNTLI GLCK   ++EA++L+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ P+  TY  LIDG C  G+ + A  +  ++   G     V +  LI  F + 
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A   +REM E GI P + TYT++I  F +  D++  F++   MQ  G  P V TY
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTY 508

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            VL++GLC +G MK A+ L ++M    + P+D+ YN+++
Sbjct: 509 NVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 173/358 (48%), Gaps = 36/358 (10%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCK 170
           + D  +K  L+  A  ++ ++LD G  P    FN L+  + K    ++  L F E  +  
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +   V SF  LI G C++G+L++ F +   + E    P+V  Y+ LI+G CK G ++ A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++ + GLV    T+T LI G    G    G E Y++M   GV P + TYN LI+  
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYN------------------------------- 319
           C  G + E  KL  EM  R +  +  TY                                
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 320 ----TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
                LI G C+E +V EAER L +M  AGI P+  TY  +I GFC  G+    F+L  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           ++ +G  P VVTYNVL+    K G  K A+ L+  M   G+ P ++TY IL++  +++
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 35/335 (10%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F   ++  G   S   ++ L++ Y + G  S+  + F  +R   +     +   L   L 
Sbjct: 142 FTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLM 201

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K      A    +++   G  P+V  +N L+   C   + ++A  LF ++   G  P+VV
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVV 261

Query: 387 TYNVLIRAFSKAGNSKM-----------------------------------ASDLVREM 411
           ++N LI  + K+GN                                      A+ L  EM
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+ P++VT+T LI+    +   +   E+Y  M + G  PDV TY  LI+GLC  G++
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           +EA KL   M +  L+P+   Y M+I G CKEG+   AL +  EM ++G+  +  ++++ 
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I   C++G+  EAE  L +ML+ G+KP  + Y ++
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S+ G +  +S     +E RG   S + +++L++++  S     A + + L++K       
Sbjct: 131 SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF 190

Query: 456 YTYGVLIHGLCMKGNMKE-ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           ++ G L   L MK N+   A   +  + +    P+   +N+++   CKE     A  L G
Sbjct: 191 HSCGYLFDRL-MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFG 249

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           E+ ++GL P + S+++ I   C+ G   +   L   M++  + P V  Y++L
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVL 301


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 221/437 (50%), Gaps = 11/437 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSFGILIKGCCEAGDLNK 193
           GVRP + T+ + L  +  +      W F  +  C+     + Y F  +I G C  G ++K
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFL-QMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A EV + +++ GF P+V  Y+ L+DG CK GD+     +  ++   G+     +Y+ L+ 
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL + G  +  FE +++++  G       Y+ ++H  C    +   + L+++M H     
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +   Y++LI   C+  +++EA  + + M   GI PNV+T   L+ GF + G   +AF   
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           ++++  G  PS+ TY V+I    K         +  +M +RG  P  V Y+I+ID FV++
Sbjct: 482 DKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+++AF +Y  M   G  P+++TY  LI+GLC    + E   LF  M    L P+ ++Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILY 601

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG----VLCQDGKWPEAEVLLN 549
             +I  YCK  N   AL +  EM  +GL  +   Y+  IG    VL  DG    A++ + 
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDG----AQLFME 657

Query: 550 QMLKLGLKPSVSLYNIL 566
           +M+  GL P+V  Y  L
Sbjct: 658 EMMNKGLTPTVVTYTDL 674



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 200/405 (49%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +F    +C    DV+S+ IL+ G C+ GD+   + +L ++   G +PN+V Y+SL+ G C
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G +E A  LF+++ + G       Y++++ G  ++   +  ++ +  M  +   P  Y
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y+ LI+ YC   ++ E  ++F+ M    +  NVVT   L+ G   E  + EA   LD++
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G+ P++ TY  +I G C   + +  + +F  +   G  P  V Y+++I  F KA + 
Sbjct: 485 RQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L  +M + G  P+  TYT LI+     D + +   ++  M   G +PD   Y  L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSL 604

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I   C + NMK A ++F  M    L  +  VY  +I G+ K      A   + EM  KGL
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P + +Y+  I    + G   +A  + N ML+ G+ P   L  IL
Sbjct: 665 TPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL 709



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 3/432 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + ++I          +A+  F  M   G  P  ++++ L+  + K      G+    E  
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  ++ S+  L+ G C AG +  AFE+  +L++ GF  + ++Y+ ++ GCC++ D+E
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE 405

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L+  +     V   + Y+ LI    ++   K+  E +E M  +G+ P++ T   L+
Sbjct: 406 ICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILV 465

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H + NEG + E F   D++R   V  ++ TY  +I GLCK  +  +   +   M   G  
Sbjct: 466 HGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYV 525

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + Y+ +IDGF  A +  +AFRL+ ++   G  P++ TY  LI              L
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTL 585

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            + M   G+ P  + YT LI  + +  +M+ A E++  M+  G S D + Y  LI G   
Sbjct: 586 FKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSK 645

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M  A      M    L P  V Y  +I GY K G+  +A+ +   M + G+ P+ A 
Sbjct: 646 VLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD-AK 704

Query: 528 YSSTIGVLCQDG 539
            S  +G L  DG
Sbjct: 705 LSCILG-LGNDG 715



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 8/362 (2%)

Query: 215 SLIDGCCKNGD--IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           S++D C   G    E   ML   +G  G +     Y  +I    +  + +D    Y + +
Sbjct: 113 SVVDHCGNAGPELFELVPMLASNLG--GSMTLPQVYATVIRVFVELSMFEDALVTYVEAK 170

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             GV   L   N L+       ++     LFD+M+    + NV +Y+ L+       ++ 
Sbjct: 171 KVGVE--LQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLC 228

Query: 333 EAERLLDQMK--MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
             E L    +  + G+ PN  TY   + G C A +   A+     L   G   +   +N 
Sbjct: 229 LEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNA 288

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I  F   G    A ++   M++ G  P   +Y+IL+D   +  D+   + M   M ++G
Sbjct: 289 VIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +P++ +Y  L+HGLC  G ++ A +LF  + +   + + +VY++++ G C+  +     
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            L  +M     VP+  +YSS I   C+  +  EA  +   M+  G+ P+V    IL    
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGF 468

Query: 571 NN 572
           +N
Sbjct: 469 SN 470



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 36/211 (17%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + LY  IID  +K+    +A   +++M+D G +P   T+ S                
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTS---------------- 568

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                             LI G C    L +   +   +   G +P+ ++YTSLI   CK
Sbjct: 569 ------------------LINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCK 610

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-FYEKMQLNGVSPSLY 281
             +++ A  +FR++   GL A    YT LI G F   L  DG + F E+M   G++P++ 
Sbjct: 611 RSNMKAALEIFREMETEGLSADSFVYTCLIGG-FSKVLAMDGAQLFMEEMMNKGLTPTVV 669

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           TY  LI  Y   G   +   +++ M    +A
Sbjct: 670 TYTDLIVGYFKIGDEKKAMAMYNSMLQAGIA 700


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 279/593 (47%), Gaps = 68/593 (11%)

Query: 27  KAFSLFNWASRQGLQHTP--QSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           +AF LF  +S   L  T   QS S ++ +L     +H +  A+ LI  +I  R+   S  
Sbjct: 90  EAFRLFETSSISRLSKTTDLQSFSAVIHVL---TGAHKYTLARCLIKSLIE-RLRRYS-E 144

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
           P ++   L        +P     ++  +I   L+  L + AL+   +M  S   P S   
Sbjct: 145 PTNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKAC 201

Query: 145 NSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
            ++L  +++   FD  W+ +    +R  V  DV+ + +L + C + G  +K  ++L+++ 
Sbjct: 202 LAILNGLVRRRRFDSVWVDYQLMISRGLVP-DVHIYSVLFQCCFKQGFPSKKEKLLDEMT 260

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
            +G  PNV IYT  I   C+   +E A+ +F  +   G+V   +TY+ +I G  K G  +
Sbjct: 261 SLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLR 320

Query: 263 DGFEFYEKMQLN-----------------------------------GVSPSLYTYNCLI 287
             +  Y+++ +                                    GV P+LY YNCLI
Sbjct: 321 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLI 380

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C  G + E   L  EM    ++ +V TY  LI GLC E R+ EA RL  +MK   I 
Sbjct: 381 HGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIF 440

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TYN LI GFC     +KA  L +++ S+G  P+++T++ LI  + K  N K A  L
Sbjct: 441 PSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGL 500

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +GI P  VTYT LID+  +  +M++A  +YS M ++G  P+ +T+  L+ G   
Sbjct: 501 YFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 560

Query: 468 KGNMKEASKLF--------------NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +G + +A   +               S W+       V +  +I G C+ G   RA R  
Sbjct: 561 EGRLSDAIDFYLENNQAATGKSIVQRSCWKY------VGFTCLIEGLCQNGYILRASRFF 614

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M   G+ P+I SY S +    ++ +  +  +L   M+K G+ P++ +  +L
Sbjct: 615 SDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLL 667



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 179/381 (46%), Gaps = 9/381 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++ID + K+    QA   + ++L + + P    F +L+    K+        LF    
Sbjct: 306 YSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV 365

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V+ ++Y +  LI G C++G++ +A  +L+++E +  SP+V  YT LI+G C    + 
Sbjct: 366 KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLA 425

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF+++    +  +  TY  LI G  K    +   +   +M  +GV P++ T++ LI
Sbjct: 426 EANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLI 485

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC    +     L+ EM  + +  +VVTY TLI    KE  ++EA RL   M  AGI 
Sbjct: 486 DGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIH 545

Query: 348 PNVITYNKLIDGFCDAGETDKA--FRLFNQLKSNGQSP------SVVTYNVLIRAFSKAG 399
           PN  T+  L+DGF   G    A  F L N   + G+S         V +  LI    + G
Sbjct: 546 PNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNG 605

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               AS    +M+  G+TP   +Y  ++ + +R   +     ++  M K+G  P++    
Sbjct: 606 YILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQ 665

Query: 460 VLIHGLCMKGNMKEASKLFNS 480
           +L       G ++ A  L NS
Sbjct: 666 LLAMFYQENGYLRSACFLTNS 686


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 209/396 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G C  G+L K  +++ +++  G  PN+  Y+S+I   CK+G +   + + 
Sbjct: 144 DVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL 203

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++ + G+      YT LI G  K G  +  ++ + +M+   + P    ++ LI      
Sbjct: 204 REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGS 263

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E  KLF+EM  +    + VTY  LI G CK   +++A  L +QM   G++PNV+TY
Sbjct: 264 GKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L DG C +GE D A  L +++   G   ++ TYN ++    KAGN   A  L+ EM+E
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  +TYT L+D++ ++ +M KA E+   M   G  P V T+ VL++GLCM G +++
Sbjct: 384 AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +L   M E  + PN   YN ++  YC   N   +  +   M  +G+VP+  +Y+  I 
Sbjct: 444 GERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIK 503

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+     EA  L  +M++     + S YN L + 
Sbjct: 504 GHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 208/393 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++Y++  +I   C++G + +  +VL ++ + G  P+ VIYT+LIDG CK G+ + A  LF
Sbjct: 179 NLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF 238

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++    +V     ++ LICGL  +G   +  + + +M   G  P   TY  LI  YC  
Sbjct: 239 SEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKL 298

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ + F L ++M    +  NVVTY  L  GLCK   +  A  LL +M   G+  N+ TY
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N +++G C AG   +A +L  ++K  G  P  +TY  L+ A+ K G    A +L+REM +
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD 418

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+ P+ VT+ +L++    S  +E    +   M + G  P+  TY  ++   C++ NM+ 
Sbjct: 419 RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRI 478

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           +++++  M    + P+   YN++I G+CK  N   A  L  EM EK      +SY++ I 
Sbjct: 479 STEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIK 538

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +  K  EA  L  +M + GL  S  +YN+ 
Sbjct: 539 GFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 219/432 (50%), Gaps = 1/432 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID +       + +    +M   G++P   T++S+++ + KS    +G     E  
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  D   +  LI G C+ G+   A+++ +++E     P+ + +++LI G   +G + 
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVV 267

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ + G    + TYT LI G  K G  K  F  + +M   G++P++ TY  L 
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G++    +L  EM  + +  N+ TYNT++ GLCK   + +A +L+++MK AG+ 
Sbjct: 328 DGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLH 387

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY  L+D +   GE  KA  L  ++   G  P+VVT+NVL+     +G  +    L
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++ M E+GI P+  TY  ++  +   ++M  + E+Y  M   G  PD  TY +LI G C 
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCK 507

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             NMKEA  L   M E +       YN +I G+ K      A +L  EM  +GLV +   
Sbjct: 508 ARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEI 567

Query: 528 YSSTIGVLCQDG 539
           Y+  + +  ++G
Sbjct: 568 YNLFVDMNYEEG 579



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SII    KS    +      +M+  GV P    + +L+    K  +    +  FSE  
Sbjct: 183 YSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEME 242

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  D  +F  LI G   +G + +A ++ N++ + GF P+ V YT+LIDG CK G+++
Sbjct: 243 AREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMK 302

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  ++ ++GL     TYT L  GL K+G      E   +M   G+  ++ TYN ++
Sbjct: 303 KAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIV 362

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G + +  KL +EM+   +  + +TY TL+    K   + +A  LL +M   G+ 
Sbjct: 363 NGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQ 422

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P V+T+N L++G C +G+ +   RL   +   G  P+  TYN +++ +    N ++++++
Sbjct: 423 PTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEI 482

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M  +G+ P   TY ILI    ++ +M++A+ ++  M +  F+    +Y  LI G   
Sbjct: 483 YRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFK 542

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +  + EA +LF  M    L  +  +YN+ +    +EGN    L L  E  EK L+
Sbjct: 543 RKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLL 597



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 202 EEMGFSPNV--VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV-LICGLFKN 258
           ++ G  P+V  V +  L++     G +  A+  F K+   G+  +  +  + L C   K 
Sbjct: 33  KDWGSDPHVFDVFFQVLVEA----GLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKR 88

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            +     + + +    GV  +  +YN L++     GK+ E   L   M  +    +VV+Y
Sbjct: 89  DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSY 148

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
            T+I G C    +Q+  +L+ +M++ G+ PN+ TY+ +I   C +G+  +  ++  ++  
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P  V Y  LI  F K GN++ A  L  EME R I P  + ++ LI     S  + +
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++++ M K GF PD  TY  LI G C  G MK+A  L N M +  L PN V Y  +  
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK G    A  LL EM  KGL  NI++Y++ +  LC+ G   +A  L+ +M + GL P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388

Query: 559 SVSLYNILYRA 569
               Y  L  A
Sbjct: 389 DTITYTTLMDA 399


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 269/571 (47%), Gaps = 26/571 (4%)

Query: 22  KLPPLKAFSLFNWA-SRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRIT 79
           K  P  AF  F W+ +R G +H+ +S  I+  +L  ++M   +++  + ++L      + 
Sbjct: 119 KEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF 178

Query: 80  SSSFTPRS--------------------LLCHLTQLFPSSSN--PVTKSRLYESIIDAHL 117
              ++ R+                    +L    Q F          K+R    ++    
Sbjct: 179 DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           K   +D    +F  M+ +G RP   T+N ++  + K    +     F E + + +  D  
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I G  + G L+       ++++M   P+V+ Y +LI+  CK G +      +R++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              GL     +Y+ L+    K G+ +   +FY  M+  G+ P+ YTY  LI   C  G +
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           S+ F+L +EM    V  NVVTY  LI GLC   R++EAE L  +M  AG+ PN+ +YN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GF  A   D+A  L N+LK  G  P ++ Y   I         + A  ++ EM+E GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + + YT L+D++ +S +  +   +   M++      V T+ VLI GLC    + +A  
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 477 LFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            FN +  +  L+ N  ++  MI G CK+     A  L  +M +KGLVP+  +Y+S +   
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + G   EA  L ++M ++G+K  +  Y  L
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 4/365 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF     +++ LID     G +E A   F K+    +     +   L+    K G   D 
Sbjct: 191 GFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
             F++ M   G  P+++TYN +I   C EG V     LF+EM+ R +  + VTYN++I G
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             K  R+ +     ++MK     P+VITYN LI+ FC  G+       + ++K NG  P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VV+Y+ L+ AF K G  + A     +M   G+ P+E TYT LID+  +  ++  AF + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G   +V TY  LI GLC    MKEA +LF  M    + PN   YN +I G+ K  
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           N  RAL LL E+  +G+ P++  Y + I  LC   K   A+V++N+M + G+K +  +Y 
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 565 ILYRA 569
            L  A
Sbjct: 547 TLMDA 551



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 165/384 (42%), Gaps = 39/384 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K       L ++ +M  +G++P   ++++L+    K     +   F+ + R
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +V L  + Y++  LI   C+ G+L+ AF + N++ ++G   NVV YT+LIDG C    +
Sbjct: 395 -RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ LF K+   G++    +Y  LI G  K        E   +++  G+ P L  Y   
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513

Query: 287 IHEYC------------NE-----------------------GKVSEGFKLFDEMRHREV 311
           I   C            NE                       G  +EG  L DEM+  ++
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAF 370
              VVT+  LI GLCK   V +A    +++    G+  N   +  +IDG C   + + A 
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF Q+   G  P    Y  L+    K GN   A  L  +M E G+    + YT L+   
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPD 454
              + ++KA      M   G  PD
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHPD 717



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 4/343 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           Y S+IDA+ K   LSD A    ++ML  GV     T+ +L+  +  +    +   LF   
Sbjct: 405 YTSLIDANCKIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   V  ++ S+  LI G  +A ++++A E+LN+L+  G  P++++Y + I G C    I
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E AK++  ++ E G+ A    YT L+   FK+G   +G    ++M+   +  ++ T+  L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583

Query: 287 IHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           I   C    VS+    F+ + +   +  N   +  +I GLCK+ +V+ A  L +QM   G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+   Y  L+DG    G   +A  L +++   G    ++ Y  L+   S     + A 
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             + EM   GI P EV    ++        +++A E+ S + K
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P    ++ L     D G  ++A + F+++K     P   + N L+  F+K G +      
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M   G  P+  TY I+ID   +  D+E A  ++  M+  G  PD  TY  +I G   
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +    F  M +   EP+ + YN +I  +CK G     L    EM   GL PN+ S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           YS+ +   C++G   +A      M ++GL P+   Y  L  A   I
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 221/463 (47%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+ LK   +D+      +M    SG  P   T N ++  + +    ++       
Sbjct: 240 YNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG 299

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI G    G + KA ++  ++E  G  P VV Y ++I G  ++G +
Sbjct: 300 MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++ F ++  +GL     TY  L+ G  K G  K+    +  ++  G++P++ TYN L
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G + E  +L +EM  +    +V TY  L+ G      +  A    D+M   G+
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G   KAFRL   +   G S   VTYN+LI    K GN   A D
Sbjct: 480 QPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKD 539

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+ P  +TYT LI +      + +A + +  M   G +P   TY V IH  C
Sbjct: 540 LQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYC 599

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M E  +EPN++ YN++I   C+ G +  A R   EM E+GLVPN  
Sbjct: 600 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKY 659

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C++G W +A     +M + G+ P    +  L++ 
Sbjct: 660 TYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 225/476 (47%), Gaps = 39/476 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           FH+M   GV P     N +L  +  +  +D      +E  +  +E  + ++  L+    +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 188 AGDLNKAFEVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
            G  +K   +L ++E  G    PN V +  +I G  + GD+E A  +   +  L   A+ 
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASS 308

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY  LI GL   G  K   +   +M+  G+ P++ TYN +IH     G+V      F E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR   +  +V+TYN+L+ G CK   ++EA  L   ++ AG++P V+TYN LIDG+C  G+
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP------- 418
            ++A RL  ++   G  P V TY +L++    A +  MA +   EM  +G+ P       
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 419 ----------------------------SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                                         VTY ILID   ++ ++  A ++   M  +G
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  TY  LIH  C +G ++EA K F  M    L P+ V Y + I  YC+ GN Y A 
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAY 608

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +M E+G+ PN  +Y+  I  LC+ G+   A    ++ML+ GL P+   Y +L
Sbjct: 609 GWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLL 664



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 205/384 (53%), Gaps = 2/384 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAG 189
           +M + G+ P   T+N+++  +++S   +   + F E R   ++ DV ++  L+ G C+AG
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L +A  +   L   G +P V+ Y  LIDG C+ GD+E A+ L  ++ E G +    TYT
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G           EF+++M   G+ P  + YN  I      G +++ F+L + M   
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            ++ + VTYN LI GLCK   + +A+ L  +M   G+ P+ ITY  LI   C+ G   +A
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREA 572

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            + F  + S+G +PS VTY V I A+ + GN   A    R+M E G+ P+E+TY +LI +
Sbjct: 573 RKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 632

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R+   + A+  +  M + G  P+ YTY +LI G C +GN ++A + +  M +  + P+
Sbjct: 633 LCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692

Query: 490 DVVYNMMIFGYCKEGNSYRALRLL 513
            + +  +  G+  EG+   A+  L
Sbjct: 693 YLTHKALFKGF-DEGHMNHAIEYL 715



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 3/305 (0%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           + +M  +GV+P +   N ++    +  +  +   +  EM    +  ++VTYNTL+    K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 328 EMRVQEAERLLDQMKM--AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           E R  +   LL +M+   +G  PN +T+N +I G    G+ ++A  +   ++ + ++ S 
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF 309

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TYN LI      G  K A DL  EME  GI P+ VTY  +I   ++S  +E A   +  
Sbjct: 310 -TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M+  G  PDV TY  L++G C  G++KEA  LF  +    L P  + YN++I GYC+ G+
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A RL  EM E+G +P++ +Y+  +           A    ++ML  GL+P    YN 
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 566 LYRAK 570
             RA+
Sbjct: 489 RIRAE 493



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 3/272 (1%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM    VA +V   N ++  L    R  +   +  +M   GI P+++TYN L+D F  
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 363 AGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            G  DK   L  ++++ G    P+ VT+NV+I   ++ G+ + A+++V  M       S 
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASS 308

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  LI   +    ++KA ++   M+  G  P V TY  +IHGL   G ++ A   F  
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L+P+ + YN ++ GYCK G+   AL L G++   GL P + +Y+  I   C+ G 
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             EA  L  +M++ G  P V  Y IL +  +N
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 255/539 (47%), Gaps = 74/539 (13%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K  +Y+  I    K  + ++A   F  M+ SG+ P++  + SL+    +  +  +G+   
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E + + + +  Y++G ++KG C +GDL+ A+ ++ ++   G  PNVVIYT+LI    +N
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
                A  + +++ E G+      Y  LI GL K     +   F  +M  NG+ P+ +TY
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 284 NC-----------------------------------LIHEYCNEGKVSEGFKLFDEMRH 308
                                                LI+EYC +GKV E    +  M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           + +  +  TY  L+ GL K  +V +AE +  +M+  GI+P+V +Y  LI+GF   G   K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +F+++   G +P+V+ YN+L+  F ++G  + A +L+ EM  +G+ P+ VTY  +ID
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-------- 480
            + +S D+ +AF ++  M+  G  PD + Y  L+ G C   +++ A  +F +        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 481 --------MW-------ETKLE---------------PNDVVYNMMIFGYCKEGNSYRAL 510
                    W       E K E               PNDV YN+MI   CKEGN   A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M    L+P + +Y+S +    + G+  E   + ++ +  G++P   +Y+++  A
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 281/669 (42%), Gaps = 134/669 (20%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P K  S FNW   Q +  T Q +     L L   +  S   A +++ ++I      +   
Sbjct: 77  PSKLLSFFNWVDSQKV--TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVW 134

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              + C  +Q F   S+      L+  + D ++     ++A+F F   +   + PR +  
Sbjct: 135 SSIVRC--SQEFVGKSD---DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRC 189

Query: 145 NSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             LL  +++    D  W ++       V  DV ++ +LI   C AG++    +VL + E+
Sbjct: 190 KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249

Query: 204 ---------------------MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
                                 G  P    Y  LIDG CK   +E AK L  ++  LG+ 
Sbjct: 250 EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309

Query: 243 ATQHTYTVLICGLFKN-----------------------------------GLQKDGFEF 267
              HTY++LI GL K                                    G+ +     
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC- 326
           ++ M  +G+ P    Y  LI  YC E  V +G++L  EM+ R +  +  TY T++ G+C 
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 327 -----------KEM-----------------------RVQEAERLLDQMKMAGISPNVIT 352
                      KEM                       R  +A R+L +MK  GI+P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI G   A   D+A     ++  NG  P+  TY   I  + +A     A   V+EM 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 413 ERGITPSEV-----------------------------------TYTILIDSFVRSDDME 437
           E G+ P++V                                   TYT+L++   ++D ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A E++  M+  G +PDV++YGVLI+G    GNM++AS +F+ M E  L PN ++YNM++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+C+ G   +A  LL EM+ KGL PN  +Y + I   C+ G   EA  L ++M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 558 PSVSLYNIL 566
           P   +Y  L
Sbjct: 730 PDSFVYTTL 738



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 251/496 (50%), Gaps = 44/496 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I   L++     A+    +M + G+ P    +NSL+I + K+   D+   F  E 
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++ + +++G  I G  EA +   A + + ++ E G  PN V+ T LI+  CK G +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   +R + + G++    TYTVL+ GLFKN    D  E + +M+  G++P +++Y  L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +   G + +   +FDEM    +  NV+ YN L+ G C+   +++A+ LLD+M + G+
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
            PN +TY  +IDG+C +G+  +AFRLF+++K  G  P                       
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753

Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLV-REME---ERGITPSEVTYTILID 428
                      S   +N LI    K G +++ ++++ R M+   +R   P++VTY I+ID
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +  ++E A E++  MQ +   P V TY  L++G    G   E   +F+      +EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN-----IASYSSTIGVLCQDGKWPE 543
           + ++Y+++I  + KEG + +AL L+ +M  K  V +     I++  + +    + G+   
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933

Query: 544 AEVLLNQMLKLGLKPS 559
           AE ++  M++L   P 
Sbjct: 934 AEKVMENMVRLQYIPD 949



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 55/462 (11%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQL--FPSSSNPVTKSR---------LYESIID 114
           A++ +++++   +  ++FT  + +    +   F S+   V + R         L   +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
            + K     +A   +  M+D G+   + T+  L+  + K+   D     F E R K +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+S+G+LI G  + G++ KA  + +++ E G +PNV+IY  L+ G C++G+IE+AK L 
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL     TY  +I G  K+G   + F  +++M+L G+ P  + Y  L+   C  
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745

Query: 294 GKVSEGFKLF--------------------------------------DEMRHREVACNV 315
             V     +F                                      D    R    N 
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN +I  LCKE  ++ A+ L  QM+ A + P VITY  L++G+   G   + F +F++
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-----EERGITPSEVTYTILIDSF 430
             + G  P  + Y+V+I AF K G +  A  LV +M      + G   S  T   L+  F
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +  +ME A ++   M +  + PD  T   LI+  C+  N +
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF  L    C  G   KA  V+ ++ E  + P   +++S++          R    F   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIV----------RCSQEFVGK 147

Query: 237 GELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
            + G++     + +L  G    G +++  F F   M L  V P L     L+       +
Sbjct: 148 SDDGVL-----FGILFDGYIAKGYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNR 201

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +   + ++  M  R V  +V TY+ LI   C+   VQ  + +L + +    +  +     
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL----- 256

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
                      D A +L   +   G  P   TY+VLI    K    + A  L+ EM+  G
Sbjct: 257 ---------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           ++    TY++LID  ++  + + A  +   M   G +   Y Y   I  +  +G M++A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF+ M  + L P    Y  +I GYC+E N  +   LL EM ++ +V +  +Y + +  +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           C  G    A  ++ +M+  G +P+V +Y  L +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 48/326 (14%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F +M++ G+ P    +N LL    +S   +K      E   K +  +  ++  +I G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GDL +AF + ++++  G  P+  +YT+L+DGCC+  D+ERA  +F    + G  ++   
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAP 768

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGV-----SPSLYTYNCLIHEYCNEGKVSEGFKL 302
           +  LI  +FK G  +   E   ++ ++G       P+  TYN +I   C EG +    +L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID---- 358
           F +M++  +   V+TY +L+ G  K  R  E   + D+   AGI P+ I Y+ +I+    
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887

Query: 359 ------------------------------------GFCDAGETDKAFRLFNQLKSNGQS 382
                                               GF   GE + A ++   +      
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLV 408
           P   T   LI     + N ++ +D V
Sbjct: 948 PDSATVIELINESCISSNQRVEADAV 973


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/619 (27%), Positives = 280/619 (45%), Gaps = 71/619 (11%)

Query: 15  NLISR---MAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLL-SKMSSHSHAAAQTL 69
           NL+ R   M ++ P  AF  FNW  RQ  ++ + Q+ + +L +L  + + S ++  A+  
Sbjct: 86  NLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERS 145

Query: 70  I---LKIISGRITSSSFTPRSLLCH------------LTQLFPSSSNPVTKSRLYESIID 114
           I   +  I   +   SF     L              + + F  S   + +     S+ +
Sbjct: 146 IDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRN 205

Query: 115 AHL------KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFFS 165
            ++       SR+ ++A   +  M++ G+ P   TFN++L    K+      DK WL   
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL--E 263

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R  +E    ++ ILI G  + G + +A      +   GF+     +  LI+G CK G 
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A  +  ++   G+  T  TY + IC L   G   D  E    M     +P + +YN 
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNT 379

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H Y   GK  E   LFD++R  ++  ++VTYNTLI GLC+   ++ A+RL ++M    
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439

Query: 346 ISPNVITYNKLIDGFCD-----------------------------------AGETDKAF 370
           I P+VITY  L+ GF                                      G++DKAF
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499

Query: 371 RLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           RL  ++  ++  +P +  YNV I    K GN   A +  R++   G+ P  VTYT +I  
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           ++ +   + A  +Y  M +    P V TY VLI+G    G +++A +    M +  + PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N +++G CK GN   A R L +M E+G+ PN  SY+  I   C   KW E   L  
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679

Query: 550 QMLKLGLKPSVSLYNILYR 568
           +ML   ++P    +  L++
Sbjct: 680 EMLDKEIEPDGYTHRALFK 698



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 168/360 (46%), Gaps = 10/360 (2%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R LLS M++    +  TL+     G I    F   SLL     L     +P   +  Y +
Sbjct: 363 RELLSSMAAPDVVSYNTLM----HGYIKMGKFVEASLL--FDDLRAGDIHPSIVT--YNT 414

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           +ID   +S   + A     +M    + P   T+ +L+   +K+ +       + E  R  
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERA 229
           ++ D Y++     G    GD +KAF +  ++      +P++ IY   IDG CK G++ +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
               RKI  +GLV    TYT +I G  +NG  K     Y++M    + PS+ TY  LI+ 
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +   G++ + F+   EM+ R V  NV+T+N L+ G+CK   + EA R L +M+  GI PN
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             +Y  LI   CD  + ++  +L+ ++      P   T+  L +   K   S+    L R
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLER 714


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 221/437 (50%), Gaps = 2/437 (0%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           HQ+ D    P       +++    + S  +      SE   + +EL+  ++  +I   C+
Sbjct: 273 HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A  V+  +   G   +  ++T+++ G C+ GD+  A+  F ++ + GL A   T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI GL + G  K+     ++M+  G+     TY  LI  YC  GK++E F + ++M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  NVVTY  L  GLCK+  V  A  LL +M   G+  N+ TYN LI+G C AG  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A R    +   G  P V TY  +I A  ++     A  L++EM ++GI P+ VTY +L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F  S  +E    +   M +    P+  TY  L+   C++ NMK  ++++  M   ++ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN++I G+CK  N   AL    EM EKG     +SY++ I +L +  K+ EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 548 LNQMLKLGLKPSVSLYN 564
             +M K  L     +YN
Sbjct: 693 FEKMRKERLTAEPDVYN 709



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 215/433 (49%), Gaps = 10/433 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G+ P   + N++L  +      D+    F E     E +  S+ IL+K  C AG +  A 
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQE---LPEKNTCSYNILLKALCTAGRIKDAH 273

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ +   EM   P+VV Y  ++ G C   ++E A  L  ++   GL      YT +I  L
Sbjct: 274 QLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
              G   D     E M ++GV      +  ++  +C +G ++     FDEM+ R +A + 
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY  LI GLC+   ++EAER+L +M+  G+  + +TY  LIDG+C  G+  +AF + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +     +P+VVTY  L     K G+   A++L+ EM  +G+  +  TY  LI+   ++ +
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+A      M ++G  PDVYTY  +I  LC    +  A  L   M +  ++P  V YN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+C  G      RLL  M EK + PN  +Y+S +   C +        +   ML   
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 556 LKPSVSLYNILYR 568
           + P+ + YNIL +
Sbjct: 631 VVPNENTYNILIK 643



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNT--FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
           D+A+  F ++      P  NT  +N LL  +  +         F E       DV ++GI
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP--DVVTYGI 290

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++ G C   +L  A ++L+++   G   N V YTS+I   C  G +  A  +   +   G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V     +T ++ G  + G       ++++MQ  G++    TY  LI+  C  G++ E  
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++  EM  + +  + VTY  LI G CK  ++ EA  + ++M    ++PNV+TY  L DG 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+   A  L +++ S G   ++ TYN LI    KAGN + A   + +M+E G+ P  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TYT +I +  +S ++++A  +   M   G  P + TY VL++G CM G ++   +L   
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  + PN   YN ++  YC E N      +   M  + +VPN  +Y+  I   C+   
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
             EA    ++M++ G + + S YN L R  N
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 195/391 (49%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V LD   F  ++ G C  GDL  A    +++++ G + + V YT+LI+G C+ G+++ A+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            + +++ + GL     TYTVLI G  K G   + F  + KM    V+P++ TY  L    
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C +G V    +L  EM  + +  N+ TYN+LI GLCK   +++A R +  M  AG+ P+V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY  +I   C + E D+A  L  ++   G  P++VTYNVL+  F  +G  +    L+  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+ I P+  TY  L+  +    +M+   E+Y  M      P+  TY +LI G C   N
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           MKEA    + M E         YN +I    K+     A RL  +M ++ L      Y+ 
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            I +   +        L ++++++ L  S++
Sbjct: 711 YIDLSFNEDNLESTLALCDELVEVTLVKSIA 741



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 1/335 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+   ++    +A     +M D G+   + T+  L+    K     + +L  ++  
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +V  +V ++  L  G C+ GD+  A E+L+++   G   N+  Y SLI+G CK G++E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A      + E GL    +TYT +I  L ++          ++M   G+ P++ TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G+V  G +L + M  + +  N  TYN+L+   C E  ++    +   M    + 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TYN LI G C A    +A    +++   G   +  +YN LIR  +K      A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
             +M +  +T     Y   ID     D++E    +
Sbjct: 693 FEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 274/549 (49%), Gaps = 34/549 (6%)

Query: 41  QHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL---CHLTQLFP 97
           + T +S +++L +L+S    + H  A  +   ++S +I  + FT   ++   C + ++  
Sbjct: 179 EPTFKSYNVVLEILVS---GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 98  SSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           + S          V  S +Y+++I +  K    ++AL    +M   G  P + TFN +++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 150 FVIKSCSFDKGWLFFSE-----NRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            +   C FD+     +E     NR  +     D  ++G L+ G C+ G ++ A ++  ++
Sbjct: 296 GL---CKFDR----INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            +    P +VI+ +LI G   +G ++ AK +L   +   G+V    TY  LI G +K GL
Sbjct: 349 PK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                E    M+  G  P++Y+Y  L+  +C  GK+ E + + +EM    +  N V +N 
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI   CKE R+ EA  +  +M   G  P+V T+N LI G C+  E   A  L   + S G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
              + VTYN LI AF + G  K A  LV EM  +G    E+TY  LI    R+ +++KA 
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  M + G +P   +  +LI+GLC  G ++EA +    M      P+ V +N +I G 
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G     L +  ++  +G+ P+  ++++ +  LC+ G   +A +LL++ ++ G  P+ 
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704

Query: 561 SLYNILYRA 569
             ++IL ++
Sbjct: 705 RTWSILLQS 713



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 1/331 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  + K  L   AL   H M + G +P   ++  L+    K    D+ +   +E  
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +   F  LI   C+   + +A E+  ++   G  P+V  + SLI G C+  +I+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L R +   G+VA   TY  LI    + G  K+  +   +M   G      TYN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V +   LF++M     A + ++ N LI GLC+   V+EA     +M + G +
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++T+N LI+G C AG  +    +F +L++ G  P  VT+N L+    K G    A  L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           + E  E G  P+  T++IL+ S +  + +++
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 6/295 (2%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           NG   S   Y  LI +    G+     +L  +M+   +      + +++    K     +
Sbjct: 105 NGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQ 164

Query: 334 AERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
             RL+ +M+ +    P   +YN +++          A  +F  + S    P++ T+ V++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           +AF        A  L+R+M + G  P+ V Y  LI S  + + + +A ++   M   G  
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PD  T+  +I GLC    + EA+K+ N M      P+D+ Y  ++ G CK G    A  L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
              + +    P I  +++ I      G+  +A+ +L+ M+   G+ P V  YN L
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 5/468 (1%)

Query: 99  SSNPVT-KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S PV   +  Y  II          +AL     ML  G +P   T+  LL  V KS  F
Sbjct: 137 ASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            +      E R K    ++ ++ ++I G C  G ++ A E LN+L   GF P+ V YT++
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           + G C     E  + LF ++ E   +  + T+ +L+    + G+ +   +  E+M  +G 
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           + +    N +I+  C +G+V + F+  + M     + + ++Y T++ GLC+  R ++A+ 
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL +M      PN +T+N  I   C  G  ++A  L  Q+  +G   ++VTYN L+  F 
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
             G    A +L   M  +   P+ +TYT L+     ++ ++ A E+ + M +   +P+V 
Sbjct: 437 VQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV 493

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T+ VL+   C KG M EA +L   M E    PN + YN ++ G  K+ NS  AL LL  +
Sbjct: 494 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 553

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              G+ P+I +YSS IGVL ++ +  EA  + + +  LG++P   +YN
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 3/377 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DL +A  ++++    G +P+V + T LI   C+ G    A  + R     G       Y 
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G           M    V+P  YTY  +I   C+ G+V E   L D+M HR
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +VVTY  L+  +CK     +A  +LD+M+  G +PN++TYN +I+G C  G  D A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
               N+L S G  P  V+Y  +++    A   +   +L  EM E+   P+EVT+ +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F R   +E+A ++   M   G + +     ++I+ +C +G + +A +  N+M      P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y  ++ G C+      A  LL EM  K   PN  ++++ I +LCQ G   +A +L+ 
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 550 QMLKLGLKPSVSLYNIL 566
           QM + G + ++  YN L
Sbjct: 415 QMSEHGCEVNIVTYNAL 431



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     ++  +     F +M++    P   TF+ L+ F  +    ++        S
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C     + +  I+I   C+ G ++ AF+ LN +   G SP+ + YT+++ G C+   
Sbjct: 313 GHGCAANTTLCN--IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L +++        + T+   IC L + GL +      E+M  +G   ++ TYN 
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ +C +G+V    +LF  M  +    N +TY TL+ GLC   R+  A  LL +M    
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +PNV+T+N L+  FC  G  D+A  L  Q+  +G +P+++TYN L+   +K  NS+ A 
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 547

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +   G++P  VTY+ +I    R D +E+A +M+ ++Q  G  P    Y  ++  L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C + N   A   F  M      PN++ Y  +I G   E        LL E+  +G++
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G + +V  Y +L+ G C+ G ++ A+   
Sbjct: 77  DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR--- 133

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I  + +    +TYT +I GL   G   +     + M   G  PS+ TY  L+   C  
Sbjct: 134 RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS 193

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  ++ DEMR +    N+VTYN +I G+C+E RV +A   L+++   G  P+ ++Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             ++ G C A   +    LF ++      P+ VT+++L+R F + G  + A  ++ +M  
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G   +     I+I++  +   ++ AF+  + M   G SPD  +Y  ++ GLC     ++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M      PN+V +N  I   C++G   +A  L+ +M+E G   NI +Y++ + 
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             C  G+   A   L     +  KP+   Y  L     N E
Sbjct: 434 GFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAE 471



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 41/444 (9%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           D   +  +  R    +DV+++  L+ G C  G L+ A  +   +  M  +P+   YT +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPII 152

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C  G +  A  L   +   G   +  TYTVL+  + K+       E  ++M+  G +
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 278 PSLYTYNCLIHEYCNEGKVSE-----------GFK------------------------L 302
           P++ TYN +I+  C EG+V +           GF+                        L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM  +    N VT++ L+   C+   V+ A ++L+QM   G + N    N +I+  C 
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  D AF+  N + S G SP  ++Y  +++   +A   + A +L++EM  +   P+EVT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +   I    +   +E+A  +   M + G   ++ TY  L++G C++G +  A +LF SM 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
               +PN + Y  ++ G C       A  LL EM +K   PN+ +++  +   CQ G   
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA  L+ QM++ G  P++  YN L
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTL 533



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N  +R      +   A+ LV     RG  P     T LI +  R      A  +    ++
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           SG + DV+ Y  L+ G C  G +  A +L  SM    + P+   Y  +I G C  G    
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           AL LL +M  +G  P++ +Y+  +  +C+   + +A  +L++M   G  P++  YN++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +  DD+ +A  +       G +PDVY    LI  LC +G   +A+++  +   +    +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN ++ GYC+ G    A RL+  M    + P+  +Y+  I  LC  G+  EA  LL+
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            ML  G +PSV  Y +L  A
Sbjct: 170 DMLHRGCQPSVVTYTVLLEA 189


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 216/389 (55%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           + +++G++I   C+ G   K  ++  ++  MG  PNV++Y+SLI+G C+ G +  A  LF
Sbjct: 78  NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+ A   TY  LI    + GL K+    + +M   G+ P + T+  LI     +
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E +K+F+ M  +  A N+VTYN+L+ GLC   ++  A RL + M   GI  +VI+Y
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G+C +G+T++A  LF +++    +PS+ TY +L++A  + G  + A +L   M+ 
Sbjct: 258 NTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQI 317

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G +PS  TYT+L+D   ++  +E+A +++  ++   + P +  Y +LI G+      + 
Sbjct: 318 CGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWES 377

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F+ +    L PN V YN+MI G CKEG    A RL  +M E G   +  S++  I 
Sbjct: 378 AMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIR 437

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
              Q+ +  +A   L +M +    P+ S+
Sbjct: 438 GFLQENQVQKAMEFLKRMREKNFSPNDSV 466



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 229/442 (51%), Gaps = 9/442 (2%)

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSF-----DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           + SG +P   T ++L    +K   F     D   LF    R   + D+  +G LI    +
Sbjct: 1   MKSGYQPNLVTVSTL----VKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRK 56

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
                +A E+  ++     S N   Y  +ID  CK+G   +   +FR++  +G+      
Sbjct: 57  TRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIV 116

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ LI GL + G  ++    +++M   G+  ++ TYN LIH  C  G   E  + F +M 
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  +VVT+ TLI  L K+ +VQEA ++ + M   G +PN++TYN L++G C   + D
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RLF  +   G    V++YN LI  +  +G ++ A  L R+M+   +TPS  TYTIL+
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            +  ++  +  A E+++ MQ  G SP + TY VL+ GLC  G ++EA  +F S+   K +
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+  +Y+++I G  +      A+ +  E+   GLVPNI +Y+  I  LC++GK  EAE L
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
             QM + G +     +N + R 
Sbjct: 417 FVQMEESGCEQDEISFNFIIRG 438



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           LY  +I+A  K+R + +A+    +ML         T+  ++  + K     KG   F E 
Sbjct: 46  LYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREM 105

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  +V  +  LI G C  G L +A  + +++   G   NV+ Y SLI   C+ G  
Sbjct: 106 INMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLW 165

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A   F ++   G++    T+T LI  L K G  ++ ++ +E M   G +P++ TYN L
Sbjct: 166 KEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSL 225

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C   ++    +LF+ M  R +  +V++YNTLI G C   + +EA  L  +M+   +
Sbjct: 226 LNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEEL 285

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++ TY  L+      G    A  LFN ++  GQSPS+ TY VL+    K G  + A D
Sbjct: 286 TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAID 345

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + R ++     PS   Y+ILI    ++   E A E++  +   G  P++ TY ++I+GLC
Sbjct: 346 VFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G + EA +LF  M E+  E +++ +N +I G+ +E    +A+  L  M EK   PN +
Sbjct: 406 KEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDS 465

Query: 527 SYSSTIGVLCQDGKWPE 543
                + +   D +  E
Sbjct: 466 VTLMLVNLYAADAQSSE 482



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 1/113 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFS 165
           R+Y  +I    ++R  + A+  F ++   G+ P   T+N ++  + K     +   LF  
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                 E D  SF  +I+G  +   + KA E L ++ E  FSPN  +   L++
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 221/437 (50%), Gaps = 2/437 (0%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           HQ+ D    P       +++    + S  +      SE   + +EL+  ++  +I   C+
Sbjct: 273 HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A  V+  +   G   +  ++T+++ G C+ GD+  A+  F ++ + GL A   T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI GL + G  K+     ++M+  G+     TY  LI  YC  GK++E F + ++M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  NVVTY  L  GLCK+  V  A  LL +M   G+  N+ TYN LI+G C AG  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A R    +   G  P V TY  +I A  ++     A  L++EM ++GI P+ VTY +L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F  S  +E    +   M +    P+  TY  L+   C++ NMK  ++++  M   ++ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN++I G+CK  N   AL    EM EKG     +SY++ I +L +  K+ EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 548 LNQMLKLGLKPSVSLYN 564
             +M K  L     +YN
Sbjct: 693 FEKMRKERLTAEPDVYN 709



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 215/433 (49%), Gaps = 10/433 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G+ P   + N++L  +      D+    F E     E +  S+ IL+K  C AG +  A 
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQE---LPEKNTCSYNILLKALCTAGRIKDAH 273

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ +   EM   P+VV Y  ++ G C   ++E A  L  ++   GL      YT +I  L
Sbjct: 274 QLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
              G   D     E M ++GV      +  ++  +C +G ++     FDEM+ R +A + 
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY  LI GLC+   ++EAER+L +M+  G+  + +TY  LIDG+C  G+  +AF + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +     +P+VVTY  L     K G+   A++L+ EM  +G+  +  TY  LI+   ++ +
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+A      M ++G  PDVYTY  +I  LC    +  A  L   M +  ++P  V YN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+C  G      RLL  M EK + PN  +Y+S +   C +        +   ML   
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 556 LKPSVSLYNILYR 568
           + P+ + YNIL +
Sbjct: 631 VVPNENTYNILIK 643



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNT--FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
           D+A+  F ++      P  NT  +N LL  +  +         F E       DV ++GI
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP--DVVTYGI 290

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++ G C   +L  A ++L+++   G   N V YTS+I   C  G +  A  +   +   G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V     +T ++ G  + G       ++++MQ  G++    TY  LI+  C  G++ E  
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++  EM  + +  + VTY  LI G CK  ++ EA  + ++M    ++PNV+TY  L DG 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+   A  L +++ S G   ++ TYN LI    KAGN + A   + +M+E G+ P  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TYT +I +  +S ++++A  +   M   G  P + TY VL++G CM G ++   +L   
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  + PN   YN ++  YC E N      +   M  + +VPN  +Y+  I   C+   
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
             EA    ++M++ G + + S YN L R  N
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 195/391 (49%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V LD   F  ++ G C  GDL  A    +++++ G + + V YT+LI+G C+ G+++ A+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            + +++ + GL     TYTVLI G  K G   + F  + KM    V+P++ TY  L    
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C +G V    +L  EM  + +  N+ TYN+LI GLCK   +++A R +  M  AG+ P+V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY  +I   C + E D+A  L  ++   G  P++VTYNVL+  F  +G  +    L+  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+ I P+  TY  L+  +    +M+   E+Y  M      P+  TY +LI G C   N
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           MKEA    + M E         YN +I    K+     A RL  +M ++ L      Y+ 
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            I +   +        L ++++++ L  S++
Sbjct: 711 YIDLSFNEDNLESTLALCDELVEVTLVKSIA 741



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 1/335 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+   ++    +A     +M D G+   + T+  L+    K     + +L  ++  
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +V  +V ++  L  G C+ GD+  A E+L+++   G   N+  Y SLI+G CK G++E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A      + E GL    +TYT +I  L ++          ++M   G+ P++ TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G+V  G +L + M  + +  N  TYN+L+   C E  ++    +   M    + 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TYN LI G C A    +A    +++   G   +  +YN LIR  +K      A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
             +M +  +T     Y   ID     D++E    +
Sbjct: 693 FEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 235/456 (51%), Gaps = 11/456 (2%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
           +S+LS  AL    +M+  G  P   T +SLL     S           +    VE+    
Sbjct: 131 RSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ---MVEMGYKP 186

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F  LI G       ++A  +++Q+ + G  P++V Y ++++G CK GDI+ A  L 
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    +  +I  L K    +   + + +M+  G+ P++ TYN LI+  CN 
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L   M  +++  NVVT+N LI    KE ++ EAE+L ++M    I P+ ITY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+GFC     D+A ++F  + S    P++ TYN LI  F K    +   +L REM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  + VTYT +I  F ++ D + A  ++  M  +    D+ TY +L+HGLC  G +  
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  + ++++E N  +YN MI G CK G    A  L   ++ K   P++ +Y++ I 
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMIS 543

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC      EA+ L  +M + G  P+   YN L RA
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 227/456 (49%), Gaps = 6/456 (1%)

Query: 117 LKSRLSD-----QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-K 170
           L++RLSD      A+  F  M+ S   P    FN LL  V K   F+       + +   
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D+Y++ I I   C    L+ A  VL ++ ++G+ P++V  +SL++G C +  I  A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ E+G      T+T LI GLF +    +     ++M   G  P L TY  +++  
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G +     L ++M    +  NVV +NT+I  LCK   V+ A  L  +M+  GI PNV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LI+  C+ G    A RL + +     +P+VVT+N LI AF K G    A  L  E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M +R I P  +TY +LI+ F   + +++A +M+  M      P++ TY  LI+G C    
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++  +LF  M +  L  N V Y  +I G+ + G+   A  +  +M    +  +I +YS 
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  LC  GK   A V+   + K  ++ ++ +YN +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 221/448 (49%), Gaps = 6/448 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
           S+++ +  S+    A+    QM++ G +P + TF +L+  +F+    S     +     R
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              + D+ ++G ++ G C+ GD++ A  +LN++E      NVVI+ ++ID  CK   +E 
Sbjct: 218 -GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G+     TY  LI  L   G   D       M    ++P++ T+N LI 
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  EGK+ E  KL +EM  R +  + +TYN LI G C   R+ EA+++   M      P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N+ TYN LI+GFC     +    LF ++   G   + VTY  +I+ F +AG+   A  + 
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M    +    +TY+IL+        ++ A  ++  +QKS    +++ Y  +I G+C  
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  LF S+    ++P+ V YN MI G C +     A  L  +M E G +PN  +Y
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           ++ I    +D     +  L+ +M   G 
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGF 601



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 48/373 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------ 161
           ++ +IID+  K R  + A+  F +M   G+RP   T+NSL+  +   C++ + W      
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL---CNYGR-WSDASRL 315

Query: 162 ---------------------LFFSENRC-------------KVELDVYSFGILIKGCCE 187
                                 FF E +               ++ D  ++ +LI G C 
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              L++A ++   +      PN+  Y +LI+G CK   +E    LFR++ + GLV    T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT +I G F+ G        +++M  N V   + TY+ L+H  C+ GK+     +F  ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
             E+  N+  YNT+I G+CK  +V EA  L   +    I P+V+TYN +I G C      
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQ 552

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF ++K +G  P+  TYN LIRA  +  +   +++L++EM   G      T + L+
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LV 611

Query: 428 DSFVRSDDMEKAF 440
            + +    ++K+F
Sbjct: 612 TNMLHDGRLDKSF 624



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 140/275 (50%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           KV +   LF +M       ++V +N L+  + K  + +    L +QM+  GIS ++ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             I+ FC   +   A  +  ++   G  P +VT + L+  +  +     A  LV +M E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P   T+T LI      +   +A  +   M + G  PD+ TYG +++GLC +G++  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L N M   +++ N V++N +I   CK  +   A+ L  EM  KG+ PN+ +Y+S I  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC  G+W +A  LL+ ML+  + P+V  +N L  A
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 232/466 (49%), Gaps = 6/466 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S +Y+++IDA  K    D+AL    +M   G  P  NTFN+++    +     +G  
Sbjct: 242 VPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAK 301

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  K    +  ++G L+ G C+   +++A  +L+++      PNVV + +L++G  
Sbjct: 302 LVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFV 357

Query: 222 KNGDI-ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           +NG + E    ++ K+   G V    T++ L+ GL K GL     E    M   G  P+L
Sbjct: 358 RNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNL 417

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +C +G++ E   +  EM  +  + N V YN LI  LCK  ++ EA  +  +
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI G C   E + A  L+  +   G   + VT+N LI AF + G 
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV +M  RG    E+TY  LI +  ++  +EK   ++  M + G +P + T  +
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+G C  G +  A +    M      P+ V YN +I G CK G    AL L  ++  +G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y++ I  LC++G + +A  LL + ++ G  P+   +NIL
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 173/333 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV++F  L+ G C+ G    A E++N ++  G  PN+  YT LIDG CK G +E A ++ 
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++   G       Y  LI  L K+G   +  + + +M   G  P ++T+N LI   C  
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ +   L+ +M    V  N VT+NTLI    +   +QEA +L++ M   G   + ITY
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  +K   LF ++   G +PS++T N+LI  F  AG    A + +R+M  
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG +P  VTY  LI+   +   +++A  ++  +Q  G  PD  TY  LI  LC +G   +
Sbjct: 621 RGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDD 680

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           A  L     E    PNDV +N++++ + K+ NS
Sbjct: 681 ACFLLYRGVENGFVPNDVTWNILVYNFGKQSNS 713



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 230/469 (49%), Gaps = 11/469 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGV---RPRSNTFNSLL-IFVIKSCSFD 158
           V +  L+  I+  + ++ L  QA      M   GV    P   ++N +L + V+ +C   
Sbjct: 136 VFRESLFILIMKYYGRAGLPGQATRLLLDM--KGVYCCEPSFRSYNVVLDVLVVGNCPSV 193

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
              +F+      V  + Y+FG+++K  C   +++ A  +L  + + G  PN +IY +LID
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
              K   ++ A  L  ++  +G     +T+  +I G  +     +G +  ++M L G +P
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  TY  L+H  C   ++ E   L  ++       NVV +NTL+ G  +  R+ EA   +
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFV 369

Query: 339 -DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            D+M   G  P+V T++ L++G C  G    A  L N + + G  P++ TY +LI  F K
Sbjct: 370 YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCK 429

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  ++REM  +G + + V Y  LI +  +   + +A +M+  M   G  PD++T
Sbjct: 430 KGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFT 489

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           +  LI GLC    M++A  L+  M    +  N V +N +I  + + G    AL+L+ +M 
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +G   +  +Y+  I  LC+ G   +   L  +M++ GL PS+   NIL
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNIL 598



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 198/391 (50%), Gaps = 9/391 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+ G C +   N  +++L++    G SPN   +  ++   C   +++ A +L R + + 
Sbjct: 184 VLVVGNCPSVASNVFYDMLSK----GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKH 239

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L K     +  +  E+M L G  P + T+N +I+ +C   +V EG
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  +    N +TY  L+ GLCK  R+ EA+ LL ++      PNV+ +N L++G
Sbjct: 300 AKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNG 355

Query: 360 FCDAGETDKAFR-LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           F   G  ++A   +++++ +NG  P V T++ L+    K G    A +LV +M+ +G  P
Sbjct: 356 FVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKP 415

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +  TYTILID F +   +E+A  +   M   GFS +   Y  LI  LC  G + EA  +F
Sbjct: 416 NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M     +P+   +N +IFG C+      AL L  +M  +G++ N  ++++ I    + 
Sbjct: 476 GEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+  EA  L+N ML  G       YN L +A
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKA 566



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 1/330 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++++   K  L   AL   + M   G +P  NT+  L+    K    ++  L   E  
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML 444

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   L+   +  LI   C+ G +++A ++  ++   G  P++  + SLI G C+  ++E
Sbjct: 445 TKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEME 504

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L+R +   G++A   T+  LI    + G  ++  +    M   G      TYN LI
Sbjct: 505 DALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLI 564

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G V +G  LF+EM  + +  +++T N LI G C   +V  A   +  M   G S
Sbjct: 565 KALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFS 624

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++TYN LI+G C  G   +A  LF +L++ G  P  +TYN LI    + G    A  L
Sbjct: 625 PDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFL 684

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDME 437
           +    E G  P++VT+ IL+ +F +  + E
Sbjct: 685 LYRGVENGFVPNDVTWNILVYNFGKQSNSE 714


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 233/473 (49%), Gaps = 20/473 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  ++D  +KS    +    +  +L SG  P   TF  L+    K+    +   F    +
Sbjct: 30  YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V  DVY F  LI G  + G+ ++A ++   +E    +P++  Y ++I G CK+G++E
Sbjct: 90  EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149

Query: 228 RAKMLFRKIGELGLVATQH--TYTVLI-CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +A+ L  ++   G  +     TY  LI  G+ K+G  ++  E  + M+L G +P + TYN
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYN 209

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +IH  C  G+V E  ++   M     + ++VT+NTL+ G CK   +  A  +L++M   
Sbjct: 210 SIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            I P+VITY  L++G C  G+   AF L  ++   G  P V+ Y  L+    K+G  + A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326

Query: 405 SDLVREMEERGI---------TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
             LV+EM  R I          P   TY I++   ++   + KA  + S +   G+ PDV
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI GLC    ++EA  L + M      PNDV    ++FG C+ G    A  L+ E
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           M+ K   PN+  Y+S I  LC+  +  +A V+L+ M   G    V+L +  YR
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQG----VALDDFAYR 495



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 258/559 (46%), Gaps = 44/559 (7%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A   F+WA  Q G +H   S + +L +L+   S H     +     + SG       
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVK--SGHQFRTGKVYKDLLHSG------- 57

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
                          S N VT    ++ +I  + K+  + +AL +   + +  V P    
Sbjct: 58  --------------CSPNLVT----FKILIRGNCKAGQATRALEFLRALDEFSVAPDVYI 99

Query: 144 FNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           FN L+  + K  + D+   LF +    +V  D++++  +I G C++G+L KA E+L ++ 
Sbjct: 100 FNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMI 159

Query: 203 EMG--FSPNVVIYTSLID-GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
             G   +P++V Y +LI+ G CK+GD+E A  +   +   G      TY  +I  L   G
Sbjct: 160 RRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAG 219

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +  E  + M     SP L T+N L+  +C  G +    ++ +EM    +  +V+TY 
Sbjct: 220 RVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 276

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            L+ GLC+  +VQ A  LL+++   G  P+VI Y  L+DG C +GE ++A +L  ++ + 
Sbjct: 277 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336

Query: 380 ---------GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                       P + TYN+++    K G+   A  L+ ++  RG  P  VTY  LID  
Sbjct: 337 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 396

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +++ + +A ++   M   G  P+  T G ++ GLC  G + +A  L   M   +  PN 
Sbjct: 397 CKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 456

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           VVY  +I G CK      A  +L  M  +G+  +  +Y   I  +   G+  EA  + ++
Sbjct: 457 VVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDE 516

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M+  G  P  S    L  A
Sbjct: 517 MVARGFLPDGSTSKTLEEA 535



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 24/392 (6%)

Query: 109 YESIIDAHL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I+A + K    ++AL     M  +G  P   T+NS++  +  +    +        
Sbjct: 172 YNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C    D+ +F  L+ G C+AG L +A EVL ++      P+V+ YT L++G C+ G ++
Sbjct: 232 SCSP--DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 289

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV---------SP 278
            A  L  +I   G +     YT L+ GL K+G  ++  +  ++M    +          P
Sbjct: 290 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVP 349

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            L+TYN ++     +G +S+   L  ++  R    +VVTYNTLI GLCK  RV+EA  L 
Sbjct: 350 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 409

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           D+M   G  PN +T   ++ G C  G  D A+ L  ++     +P+VV Y  LI    K+
Sbjct: 410 DEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKS 469

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A  ++  M  +G+   +  Y  LI S +    + +A  MY  M   GF PD  T 
Sbjct: 470 DRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTS 529

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWE-TKLEPN 489
             L           E + + NS++E T LE N
Sbjct: 530 KTL-----------EEAAMSNSVFEWTNLEEN 550


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 262/562 (46%), Gaps = 102/562 (18%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           LY  ++ +  K    D   +    M+ SGV P + TFN L+  +  S   D     F   
Sbjct: 23  LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C  E + YSFGIL++G C AG  +K  E+L ++  +GFSPN V+Y +LI   CK G
Sbjct: 83  PEKGC--EPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG 140

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV----SPSL 280
             + A+ L  ++ + GL     T+   I  L  +G   +    +  MQ++ V     P++
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI 200

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHRE------------------------------ 310
            TYN ++  +C EG + E   LF++M+  E                              
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260

Query: 311 -----VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
                +  NV +YN ++ GLCK   + +A  L+  M  +G+ P+ +TY  L+ G+C  G+
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  +  ++  +G SP+  T N+L+ +  K G    A +L+++M E+G     VT  I
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFS-----------------------PDVYTYGVLI 462
           +ID    +  ++KA E+ + M   G +                       PD+ +Y  +I
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTII 440

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG---NSYRALR-------- 511
            GLC  G + EA K F  M    L+P+  +Y++ I  +CKEG   +++R L+        
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCN 500

Query: 512 ------------------------LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
                                   L+ EM E+G+ P+++ Y++ +  LC+ G+  +A  +
Sbjct: 501 KTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSV 560

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
           L++ML+ G+ P++S ++IL +A
Sbjct: 561 LDEMLQKGISPNISSFSILIKA 582



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 198/385 (51%), Gaps = 4/385 (1%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +Y + +L++ C + G ++    +   +   G SP    +  LI   C +G ++ A+ LF 
Sbjct: 21  IYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFD 80

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E G    ++++ +L+ G  + G    G E   +M+  G SP+   YN LI  +C EG
Sbjct: 81  KMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG 140

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI----SPNV 350
           K  +  KL DEMR   ++ +VVT+N  I  LC   +V EA R+   M++  +     PN+
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI 200

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITYN ++ GFC  G  ++A  LF ++K +    +  +YN+ +    + G    A  +++E
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G+ P+  +Y I++D   ++  +  A  +  LM  SG  PD  TY  L+HG C  G 
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA+ +   M      PN+   N++++   KEG    A  LL +MNEKG V +  + + 
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLG 555
            I  LC +GK  +A  ++N M   G
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHG 405



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 211/462 (45%), Gaps = 27/462 (5%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSENRCKVELDVYSFGILI 182
           +A     +M+D G+ P   ++N ++  + K+   FD   L        V  D  ++  L+
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  G +++A  VL ++   G SPN      L+    K G I  A+ L +K+ E G V
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-----------------------PS 279
               T  ++I GL  NG      E    M  +G +                       P 
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPD 432

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           L +Y+ +I   C  G+V E  K F EM  + +  +   Y+  I   CKE ++  A R+L 
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLK 492

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M+  G +  + TYN LI G     +  + + L ++++  G SP V  YN ++ +  + G
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGG 552

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL-MQKSGFSPDVYTY 458
             K A  ++ EM ++GI+P+  +++ILI +F ++ D     E++ + +   G    +Y+ 
Sbjct: 553 RVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYS- 611

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +  + L + G + +A +LF +  +   +  + +Y  +I   CK+     A  +L ++ +
Sbjct: 612 -LTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLID 670

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           KG   + AS+   I  L + G   EA+ L  +M+++  +  V
Sbjct: 671 KGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKV 712



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 210/464 (45%), Gaps = 28/464 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  ++D   K+ +   A      M  SGV P + T+ +LL     +    +      E  
Sbjct: 273 YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM 332

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R     + Y+  IL+    + G +++A E+L ++ E G+  + V    +IDG C NG ++
Sbjct: 333 RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLD 392

Query: 228 RAKMLFR--------KIGELG-----LVATQHT----------YTVLICGLFKNGLQKDG 264
           +A  +           +G LG     LV    +          Y+ +I GL K G   + 
Sbjct: 393 KAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEA 452

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + +M    + P    Y+  IH +C EGK+S  F++  +M  +     + TYN+LI G
Sbjct: 453 KKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMG 512

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L  + ++ E   L+D+M+  G+SP+V  YN ++   C+ G    A  + +++   G SP+
Sbjct: 513 LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPN 572

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           + ++++LI+AF KA +   A D + E+        E  Y++  +  +   ++ KA E++ 
Sbjct: 573 ISSFSILIKAFCKACDFS-AVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFE 631

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                 F    + Y  LI  LC    + +AS + + + +     +   +  +I G  K G
Sbjct: 632 TALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRG 691

Query: 505 NSYRALRL---LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           N + A  L   + EM  +G V N    +++  +  +  K  E+E
Sbjct: 692 NKHEADELAEKMMEMASEGKVKNKVHQNASCSIQGKKNKDGESE 735



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 83/147 (56%)

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS   Y +L+ S  +   ++    +   M  SG SP+ YT+ VLI  LC  G + +A +L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F+ M E   EPN+  + +++ GYC+ G + + L LLGEM   G  PN   Y++ I   C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +GK  +AE L+++M K GL P V  +N
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFN 165



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 41/82 (50%)

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+  +YN+++    KEG       L  +M   G+ P   +++  IG+LC  G   +A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
            ++M + G +P+   + IL R 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRG 100


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 221/437 (50%), Gaps = 2/437 (0%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           HQ+ D    P       +++    + S  +      SE   + +EL+  ++  +I   C+
Sbjct: 273 HQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G ++ A  V+  +   G   +  ++T+++ G C+ GD+  A+  F ++ + GL A   T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI GL + G  K+     ++M+  G+     TY  LI  YC  GK++E F + ++M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  NVVTY  L  GLCK+  V  A  LL +M   G+  N+ TYN LI+G C AG  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A R    +   G  P V TY  +I A  ++     A  L++EM ++GI P+ VTY +L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + F  S  +E    +   M +    P+  TY  L+   C++ NMK  ++++  M   ++ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN++I G+CK  N   AL    EM EKG     +SY++ I +L +  K+ EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 548 LNQMLKLGLKPSVSLYN 564
             +M K  L     +YN
Sbjct: 693 FEKMRKDRLTAEPDVYN 709



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 215/433 (49%), Gaps = 10/433 (2%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G+ P   + N++L  +      D+    F E     E +  S+ IL+K  C AG +  A 
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQE---LPEKNTCSYNILLKALCTAGRIKDAH 273

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ +   EM   P+VV Y  ++ G C   ++E A  L  ++   GL      YT +I  L
Sbjct: 274 QLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALL 330

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
              G   D     E M ++GV      +  ++  +C +G ++     FDEM+ R +A + 
Sbjct: 331 CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY  LI GLC+   ++EAER+L +M+  G+  + +TY  LIDG+C  G+  +AF + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +     +P+VVTY  L     K G+   A++L+ EM  +G+  +  TY  LI+   ++ +
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E+A      M ++G  PDVYTY  +I  LC    +  A  L   M +  ++P  V YN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ G+C  G      RLL  M EK + PN  +Y+S +   C +        +   ML   
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 556 LKPSVSLYNILYR 568
           + P+ + YNIL +
Sbjct: 631 VVPNENTYNILIK 643



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNT--FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
           D+A+  F ++      P  NT  +N LL  +  +         F E       DV ++GI
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP--DVVTYGI 290

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++ G C   +L  A ++L+++   G   N V YTS+I   C  G +  A  +   +   G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V     +T ++ G  + G       ++++MQ  G++    TY  LI+  C  G++ E  
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++  EM  + +  + VTY  LI G CK  ++ EA  + ++M    ++PNV+TY  L DG 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+   A  L +++ S G   ++ TYN LI    KAGN + A   + +M+E G+ P  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TYT +I +  +S ++++A  +   M   G  P + TY VL++G CM G ++   +L   
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  + PN   YN ++  YC E N      +   M  + +VPN  +Y+  I   C+   
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
             EA    ++M++ G + + S YN L R  N
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLN 681



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 194/391 (49%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V LD   F  ++ G C  GDL  A    +++++ G + + V YT+LI+G C+ G+++ A+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            + +++ + GL     TYTVLI G  K G   + F  + KM    V+P++ TY  L    
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C +G V    +L  EM  + +  N+ TYN+LI GLCK   +++A R +  M  AG+ P+V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY  +I   C + E D+A  L  ++   G  P++VTYNVL+  F  +G  +    L+  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E+ I P+  TY  L+  +    +M+   E+Y  M      P+  TY +LI G C   N
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           MKEA    + M E         YN +I    K+     A RL  +M +  L      Y+ 
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            I +   +        L ++++++ L  S++
Sbjct: 711 YIDLSFNEDNLESTLALCDELVEVTLVKSIA 741



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 1/335 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I+   ++    +A     +M D G+   + T+  L+    K     + +L  ++  
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +V  +V ++  L  G C+ GD+  A E+L+++   G   N+  Y SLI+G CK G++E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A      + E GL    +TYT +I  L ++          ++M   G+ P++ TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C  G+V  G +L + M  + +  N  TYN+L+   C E  ++    +   M    + 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TYN LI G C A    +A    +++   G   +  +YN LIR  +K      A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
             +M +  +T     Y   ID     D++E    +
Sbjct: 693 FEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 232/464 (50%), Gaps = 6/464 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---EN 167
           +  A+ K+ L ++A+  F +M+D    R    +FNS+L  +I+   F +   F+      
Sbjct: 105 VFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGG 164

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +V SF ++IK  C+ G +++A EV  ++      P+V  Y +L+DG CK   I+
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +L  ++   G   +  T+ VLI GL K G      +  + M L G  P+  TYN +I
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C +GK+ +   L D M   +   N VTY TLI GL K+ R  +   LL  ++  G  
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   Y+ LI G     ++++A  L+ ++   G  P++V Y+ LI    + G    A ++
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +G TP+  TY+ LI  F ++ + +KA  ++  M K+   P+   Y VLIHGLC 
Sbjct: 405 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 464

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM--NEKGLVPNI 525
            G ++EA  ++  M    L P+ V Y+ MI G C  G+    L+L  EM   E    P++
Sbjct: 465 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 524

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+  +  LC+      A  LLN ML  G  P +   NI   A
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 568



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 208/415 (50%), Gaps = 6/415 (1%)

Query: 156 SFDKGWLFFSENRCKVELDVY---SFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVV 211
           S D G LF   +R K E  V+   +F ++ +   +A    KA E+  ++ +E      V 
Sbjct: 77  SGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 136

Query: 212 IYTSLIDGCCKNGDIERAKMLFR--KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
            + S+++   + G   RA   +     G+  +     ++ ++I  + K GL     E + 
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M +    P ++TY  L+   C E ++ E   L DEM+      + VT+N LI GLCK+ 
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +    +L+D M + G  PN +TYN +I+G C  G+ DKA  L +++ ++   P+ VTY 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI    K G S     L+  +EERG   +E  Y+ LI    + +  E+A  ++  M + 
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P++  Y  LI GLC +G + EA ++   M      PN   Y+ +I G+ K GNS +A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +R+  EM +   VPN   YS  I  LC+DGK  EA ++   ML  GL+P V  Y+
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 19/436 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D   K    D+A+    +M   G  P S TFN L+  + K     +         
Sbjct: 210 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 269

Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K  V  +V ++  +I G C  G L+KA  +L+++      PN V Y +LI+G  K G  
Sbjct: 270 LKGCVPNEV-TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRS 328

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
                L   + E G  A ++ Y+ LI GLFK    ++    ++KM   G  P++  Y+ L
Sbjct: 329 VDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 388

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EGK+ E  ++  EM ++    N  TY++LI G  K    Q+A R+  +M     
Sbjct: 389 IDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC 448

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN I Y+ LI G C+ G+  +A  ++  +   G  P VV Y+ +I     AG+ ++   
Sbjct: 449 VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK 508

Query: 407 LVREM--EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           L  EM  +E    P  VTY IL+ +  + + +  A ++ + M   G +PD+ T  + ++ 
Sbjct: 509 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 568

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L  K N  +  + F      +L     +                A +++  M +K L PN
Sbjct: 569 LREKLNPPQDGREFLDELVVRLHKRQRIVG--------------AAKIIEVMLQKFLPPN 614

Query: 525 IASYSSTIGVLCQDGK 540
            +++   I  LC+  K
Sbjct: 615 ASTWERIIPELCKPKK 630



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 38/323 (11%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACN---VVTYNTLICGLCKEMRVQEAERL 337
           T+  LI  Y N G     F++FD M R R V      ++ +         E  ++   R+
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 338 LDQMKM----------------------------------AGISPNVITYNKLIDGFCDA 363
           +D+ +                                     ISPNV+++N +I   C  
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  D+A  +F ++      P V TY  L+    K      A  L+ EM+  G  PS VT+
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            +LI+   +  DM +  ++   M   G  P+  TY  +I+GLC+KG + +A  L + M  
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           +K  PNDV Y  +I G  K+G S   + LL  + E+G   N  +YS+ I  L ++ K  E
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A  L  +M++ G +P++ +Y+ L
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSAL 388



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 23/260 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           +Y ++ID   +    D+A     +M++ G  P + T++SL+    K+ +  K    W   
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           ++N C      YS  +LI G CE G L +A  +   +   G  P+VV Y+S+I G C  G
Sbjct: 444 AKNNCVPNEICYS--VLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 501

Query: 225 DIERAKMLFRKI--GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            +E    LF ++   E        TY +L+  L K        +    M   G +P L T
Sbjct: 502 SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561

Query: 283 YNCLIHEYCNE-GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            N  ++    +     +G +  DE               L+  L K  R+  A ++++ M
Sbjct: 562 CNIFLNALREKLNPPQDGREFLDE---------------LVVRLHKRQRIVGAAKIIEVM 606

Query: 342 KMAGISPNVITYNKLIDGFC 361
               + PN  T+ ++I   C
Sbjct: 607 LQKFLPPNASTWERIIPELC 626



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           + +N V     Y  +I    +     +A+  +  ML  G+RP    ++S++  +  + S 
Sbjct: 444 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503

Query: 158 DKGWLFFSENRCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
           + G   F+E  C+    + DV ++ IL++  C+   ++ A ++LN + + G +P+++
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 560


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 5/468 (1%)

Query: 99  SSNPVT-KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S PV   +  Y  II          +AL     ML  G +P   T+  LL  V KS  F
Sbjct: 168 ASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 227

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            +      E R K    ++ ++ ++I G C  G ++ A E LN+L   GF P+ V YT++
Sbjct: 228 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 287

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           + G C     E  + LF ++ E   +  + T+ +L+    + G+ +   +  E+M  +G 
Sbjct: 288 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           + +    N +I+  C +G+V + F+  + M     + + ++Y T++ GLC+  R ++A+ 
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL +M      PN +T+N  I   C  G  ++A  L  Q+  +G   ++VTYN L+  F 
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 467

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
             G    A +L   M  +   P+ +TYT L+     ++ ++ A E+ + M +   +P+V 
Sbjct: 468 VQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV 524

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T+ VL+   C KG M EA +L   M E    PN + YN ++ G  K+ NS  AL LL  +
Sbjct: 525 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 584

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              G+ P+I +YSS IGVL ++ +  EA  + + +  LG++P   +YN
Sbjct: 585 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 632



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 182/374 (48%), Gaps = 3/374 (0%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  ++++    G +P+V + T LI   C+ G    A  + R     G       Y  L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  + G           M    V+P  YTY  +I   C+ G+V E   L D+M HR   
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VVTY  L+  +CK     +A  +LD+M+  G +PN++TYN +I+G C  G  D A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N+L S G  P  V+Y  +++    A   +   +L  EM E+   P+EVT+ +L+  F R
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +E+A ++   M   G + +     ++I+ +C +G + +A +  N+M      P+ + 
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  ++ G C+      A  LL EM  K   PN  ++++ I +LCQ G   +A +L+ QM 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 553 KLGLKPSVSLYNIL 566
           + G + ++  YN L
Sbjct: 449 EHGCEVNIVTYNAL 462



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     ++  +     F +M++    P   TF+ L+ F  +    ++        S
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C     + +  I+I   C+ G ++ AF+ LN +   G SP+ + YT+++ G C+   
Sbjct: 344 GHGCAANTTLCN--IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L +++        + T+   IC L + GL +      E+M  +G   ++ TYN 
Sbjct: 402 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 461

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ +C +G+V    +LF  M  +    N +TY TL+ GLC   R+  A  LL +M    
Sbjct: 462 LVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +PNV+T+N L+  FC  G  D+A  L  Q+  +G +P+++TYN L+   +K  NS+ A 
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 578

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +   G++P  VTY+ +I    R D +E+A +M+ ++Q  G  P    Y  ++  L
Sbjct: 579 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 638

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C + N   A   F  M      PN++ Y  +I G   E        LL E+  +G++
Sbjct: 639 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G + +V  Y +L+ G C+ G ++ A+   
Sbjct: 108 DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR--- 164

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I  + +    +TYT +I GL   G   +     + M   G  PS+ TY  L+   C  
Sbjct: 165 RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS 224

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  ++ DEMR +    N+VTYN +I G+C+E RV +A   L+++   G  P+ ++Y
Sbjct: 225 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 284

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             ++ G C A   +    LF ++      P+ VT+++L+R F + G  + A  ++ +M  
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G   +     I+I++  +   ++ AF+  + M   G SPD  +Y  ++ GLC     ++
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M      PN+V +N  I   C++G   +A  L+ +M+E G   NI +Y++ + 
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             C  G+   A   L     +  KP+   Y  L     N E
Sbjct: 465 GFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAE 502



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 41/444 (9%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           D   +  +  R    +DV+++  L+ G C  G L+ A  +   +  M  +P+   YT +I
Sbjct: 127 DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPII 183

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C  G +  A  L   +   G   +  TYTVL+  + K+       E  ++M+  G +
Sbjct: 184 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 243

Query: 278 PSLYTYNCLIHEYCNEGKVSE-----------GFK------------------------L 302
           P++ TYN +I+  C EG+V +           GF+                        L
Sbjct: 244 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 303

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM  +    N VT++ L+   C+   V+ A ++L+QM   G + N    N +I+  C 
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  D AF+  N + S G SP  ++Y  +++   +A   + A +L++EM  +   P+EVT
Sbjct: 364 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 423

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +   I    +   +E+A  +   M + G   ++ TY  L++G C++G +  A +LF SM 
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 482

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
               +PN + Y  ++ G C       A  LL EM +K   PN+ +++  +   CQ G   
Sbjct: 483 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 540

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA  L+ QM++ G  P++  YN L
Sbjct: 541 EAIELVEQMMEHGCTPNLITYNTL 564



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 3/207 (1%)

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           A  + +A RL ++  S G++P V     LIR   + G +  A+ ++R  E  G       
Sbjct: 87  ATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 146

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  L+  + R   ++ A  + + M     +PD YTY  +I GLC +G + EA  L + M 
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
               +P+ V Y +++   CK     +A+ +L EM  KG  PNI +Y+  I  +C++G+  
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A   LN++   G +P    Y  + + 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKG 290



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 3/173 (1%)

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A S A  S  A+ LV     RG  P     T LI +  R      A  +    ++SG + 
Sbjct: 83  ASSPATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 142

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           DV+ Y  L+ G C  G +  A +L  SM    + P+   Y  +I G C  G    AL LL
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLL 199

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M  +G  P++ +Y+  +  +C+   + +A  +L++M   G  P++  YN++
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/619 (27%), Positives = 280/619 (45%), Gaps = 71/619 (11%)

Query: 15  NLISR---MAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLL-SKMSSHSHAAAQTL 69
           NL+ R   M ++ P  AF  FNW  RQ  ++ + Q+ + +L +L  + + S ++  A+  
Sbjct: 123 NLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERS 182

Query: 70  I---LKIISGRITSSSFTPRSLLCH------------LTQLFPSSSNPVTKSRLYESIID 114
           I   +  I   +   SF     L              + + F  S   + +     S+ +
Sbjct: 183 IDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRN 242

Query: 115 AHL------KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFFS 165
            ++       SR+ ++A   +  M++ G+ P   TFN++L    K+      DK WL   
Sbjct: 243 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL--E 300

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R  +E    ++ ILI G  + G + +A      +   GF+     +  LI+G CK G 
Sbjct: 301 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 360

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A  +  ++   G+  T  TY + IC L   G   D  E    M     +P + +YN 
Sbjct: 361 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNT 416

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H Y   GK  E   LFD++R  ++  ++VTYNTLI GLC+   ++ A+RL ++M    
Sbjct: 417 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 476

Query: 346 ISPNVITYNKLIDGFCDA-----------------------------------GETDKAF 370
           I P+VITY  L+ GF                                      G++DKAF
Sbjct: 477 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 536

Query: 371 RLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           RL  ++  ++  +P +  YNV I    K GN   A +  R++   G+ P  VTYT +I  
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           ++ +   + A  +Y  M +    P V TY VLI+G    G +++A +    M +  + PN
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N +++G CK GN   A R L +M E+G+ PN  SY+  I   C   KW E   L  
Sbjct: 657 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 716

Query: 550 QMLKLGLKPSVSLYNILYR 568
           +ML   ++P    +  L++
Sbjct: 717 EMLDKEIEPDGYTHRALFK 735



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 2/337 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAG 189
           ++L S   P   ++N+L+   IK   F +  L F + R   +   + ++  LI G CE+G
Sbjct: 401 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 460

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L  A  +  ++      P+V+ YT+L+ G  KNG++  A  ++ ++   G+    + YT
Sbjct: 461 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 520

Query: 250 VLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
               G  + G     F  +E+M   +  +P L  YN  I   C  G + +  +   ++  
Sbjct: 521 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 580

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  + VTY T+I G  +  + + A  L D+M    + P+VITY  LI G   AG  ++
Sbjct: 581 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 640

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF+   ++K  G  P+V+T+N L+    KAGN   A   + +MEE GI P++ +YT+LI 
Sbjct: 641 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 700

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
                +  E+  ++Y  M      PD YT+  L   L
Sbjct: 701 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 737



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 168/357 (47%), Gaps = 11/357 (3%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R LLS M++    +  TL+     G I    F   SLL     L     +P   +  Y +
Sbjct: 400 RELLSSMAAPDVVSYNTLM----HGYIKMGKFVEASLL--FDDLRAGDIHPSIVT--YNT 451

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           +ID   +S   + A     +M    + P   T+ +L+   +K+ +       + E  R  
Sbjct: 452 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 511

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERA 229
           ++ D Y++     G    GD +KAF +  ++      +P++ IY   IDG CK G++ +A
Sbjct: 512 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 571

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
               RKI  +GLV    TYT +I G  +NG  K     Y++M    + PS+ TY  LI+ 
Sbjct: 572 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 631

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +   G++ + F+   EM+ R V  NV+T+N L+ G+CK   + EA R L +M+  GI PN
Sbjct: 632 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 691

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +Y  LI   CD  + ++  +L+ ++      P   T+  L +   K   S MA D
Sbjct: 692 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES-MALD 747


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 210/428 (49%), Gaps = 35/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D YS  ++++G C  G + K  +++      G  PN V Y  LIDG C+ GD+ R  +L 
Sbjct: 258 DDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLL 317

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL+ T  TY  L+  L + G  +       +M+   + P++  YN +I   C  
Sbjct: 318 GEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKC 377

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
              S+   +  +M       + +T++TLI GLC+E RVQEAERLL +     ++PN+ +Y
Sbjct: 378 RSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSY 437

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN--------SKMAS 405
             LI GFC  GE   A  L  ++   G +P VVT+  LI     AG          KMA+
Sbjct: 438 TSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAA 497

Query: 406 ---------------------------DLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                                      +L+ EM E+ + P +  YT LID F+R++ +++
Sbjct: 498 RQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDE 557

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A +++  M++ G  PDV  Y  +I G C  G M EA +  ++M +    P++  Y  +I 
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIG 617

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY K+GN   AL LL +M ++   PN+ +YSS I   C+ G    AE L   M   GL P
Sbjct: 618 GYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFP 677

Query: 559 SVSLYNIL 566
           +V  Y IL
Sbjct: 678 NVITYTIL 685



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 218/480 (45%), Gaps = 22/480 (4%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y S+IDA  K R + QAL    QM   G  P + TF++L+  + +     +      E
Sbjct: 365 QIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRE 424

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R ++  ++ S+  LI G C  G++  A  +L ++ E G +P+VV + +LI G    G 
Sbjct: 425 TTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQ 484

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A ++  K+    L+   + Y VLI GL K  +        E+M    V P  Y Y  
Sbjct: 485 VSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTT 544

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +     + E  K+F+ M  + +  +VV YN +I G C+   + EA   +  M+  G
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY  LI G+   G    A  L   +      P+VV Y+ LI  + K G++  A 
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAE 664

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   ME +G+ P+ +TYTILI S  + D + +A   +  M  +  SP+ YT   L+ GL
Sbjct: 665 CLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724

Query: 466 CM------------------KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           C                   KG + +   +F ++   + +P +  YN +IF  C      
Sbjct: 725 CNSMASIISSHCSSTVNLHGKGALLD---IFRALVNDRCDPRNSAYNAIIFSLCIHNMLG 781

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            AL L  +M  KG  P+ A++ S +   C  GK  E   +L    +       S Y IL+
Sbjct: 782 EALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILF 841



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 200/433 (46%), Gaps = 1/433 (0%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELD-VYSFG 179
           L ++ L        +G  P +  +N L+    +     +G L   E   K  L  V ++G
Sbjct: 274 LVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+      GDL K   +L+++ E    PNV IY S+ID  CK     +A ++ +++   
Sbjct: 334 TLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAG 393

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      T++ LI GL + G  ++      +     ++P+L +Y  LIH +C  G+V   
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM  R    +VVT+  LI GL    +V EA  + ++M    + P+   YN LI G
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C       A  L  ++      P    Y  LI  F +  +   A  +   ME++GI P 
Sbjct: 514 LCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPD 573

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V Y  +I  + +   M +A E  S M+K G  PD +TY  LI G   +GN+  A  L  
Sbjct: 574 VVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLC 633

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M + + +PN V Y+ +I GYCK G++  A  L G M  +GL PN+ +Y+  IG L +  
Sbjct: 634 DMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKD 693

Query: 540 KWPEAEVLLNQML 552
           K   A +    ML
Sbjct: 694 KVVRAAMYFEYML 706



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 159/326 (48%)

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           A  ++  V++ GL   GL + G +  E     G  P+   YN LI  YC  G V  G  L
Sbjct: 257 ADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILL 316

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM  + +   VVTY TL+  L ++  +++   LL +M+   + PNV  YN +ID  C 
Sbjct: 317 LGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCK 376

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
                +A  +  Q+ + G  P  +T++ LI    + G  + A  L+RE     + P+  +
Sbjct: 377 CRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSS 436

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT LI  F    ++  A  +   M + G +PDV T+G LIHGL + G + EA  +   M 
Sbjct: 437 YTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMA 496

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
             +L P+  +YN++I G CK+     A  L+ EM E+ + P+   Y++ I    ++    
Sbjct: 497 ARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLD 556

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYR 568
           EA  +   M + G+ P V  YN + +
Sbjct: 557 EARKIFEFMEQKGIHPDVVGYNAMIK 582



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 145/350 (41%), Gaps = 70/350 (20%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +++G+++ +      +     QL P ++       +Y  +I    K ++   A     +M
Sbjct: 480 VVAGQVSEALLVREKMAAR--QLLPDAN-------IYNVLISGLCKKKMLPAARNLIEEM 530

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDL 191
           L+  V P    + +L+   I++ S D+    F     K +  DV  +  +IKG C+ G +
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 192 NKAFEVLNQLEEMG-----------------------------------FSPNVVIYTSL 216
           N+A E ++ + ++G                                     PNVV Y+SL
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I+G CK GD + A+ LF  +   GL     TYT+LI  LFK         ++E M LN  
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 277 SPSLYTYNCLIHEYCN------------------EGKVSEGFKLF--DEMRHREVACNVV 316
           SP+ YT + L+   CN                  +G + + F+    D    R  A    
Sbjct: 711 SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSA---- 766

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            YN +I  LC    + EA  L ++M   G  P+  T+  L+ GFC  G++
Sbjct: 767 -YNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKS 815


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 236/506 (46%), Gaps = 33/506 (6%)

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
            L +  P   N V     + S+++   ++R  D+A   F  M +SG      T+N LL  
Sbjct: 299 QLLKAMPCVPNVVC----FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 151 VIKSCSFDKGW----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM-G 205
           + K     + +    L      C    +V +F  LI+G C AG +N+A+EV  ++  + G
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSP--NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEG 412

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKI---------------GELGLVATQH---- 246
            SPN   Y  L++G CK GD  R +  F ++                E+  +  Q     
Sbjct: 413 ISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPT 472

Query: 247 --TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY  L+ GL K+G+ +D     E M  +G+SP + T+N ++   C E ++ +   +F 
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 532

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
               R    NVVTY+TLI GL K  ++ EA +LL +M   G   N +TY+ ++DG    G
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             + A  +  Q++  G  P  VTYN LI  F K    + A  L+REM E G  PS VTYT
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L     RS   ++A E+   M   G +P+  TY  ++ GLC  G + EA   F  M   
Sbjct: 653 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 712

Query: 485 K-LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + + P+ + Y+ +I G CK G    A   L  M   G +P++ ++S  I  LC  G+   
Sbjct: 713 EVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 772

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
              L   M + G K  +  YN +  A
Sbjct: 773 GLELFCGMAERGCKADIYAYNAMINA 798



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 73/521 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y ++ID   +    D+      +M   G  P + T+N+L+  ++      + +      +
Sbjct: 39  YSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA 98

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C  EL   +FG++IKG C+ G++  AF V++++ + GF P+V I+T L+   C+ G 
Sbjct: 99  ANGCPPEL--ITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGR 156

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFK---------------------------- 257
           ++ A   F+++  +G      TY  ++ GL+K                            
Sbjct: 157 VDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTI 216

Query: 258 --NGLQKDG-----FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
             +GL K G     +EF++ M   GVSP+  TY+ LI   C  GK+     L   +R + 
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKN 273

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               +  +++L+ GLC+  R++EA +LL  M      PNV+ +N L++G C A   D+AF
Sbjct: 274 SQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAF 330

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA---SDLVREMEERGITPSEVTYTILI 427
            LF+ +K +G S  V+TYN+L++   K      A    +L+R  E  G +P+ VT++ LI
Sbjct: 331 ELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE--GCSPNVVTFSTLI 388

Query: 428 DSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK- 485
                +  + +A+E+Y  M    G SP+ +TY  L+ GLC  G+ +   + F  M E + 
Sbjct: 389 QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREW 448

Query: 486 --------------------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
                                 P  V YN ++ G  K G    AL LL  M E GL P++
Sbjct: 449 RSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDV 508

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +++S +  LC++ +  +A  +  + L+ G +P+V  Y+ L
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 549



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 226/472 (47%), Gaps = 11/472 (2%)

Query: 100  SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
            +N VT    Y +++D  LK    + A+    QM D+G  P + T+N+L+    K     +
Sbjct: 576  ANTVT----YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631

Query: 160  GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                  E         V ++  L  G C +G  ++A E+L+ +   G +PN + Y+S++D
Sbjct: 632  AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691

Query: 219  GCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G CK G +  A   F K+    +VA     Y+ LI GL K G   + +EF E+M   G  
Sbjct: 692  GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            P + T++ LI+  C+ G++  G +LF  M  R    ++  YN +I   C +     A  L
Sbjct: 752  PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811

Query: 338  LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            L++MK  GI+ N +T+  +I   C     D+A   F+ +  + +    ++YN LI +   
Sbjct: 812  LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVA 869

Query: 398  AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            +  S+ A +L+R M   G +P    Y  ++D   ++   E A ++   M+  G SPD+ T
Sbjct: 870  SRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRT 929

Query: 458  YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
            Y ++I GL     +  A   F  M    L+P+ +VY+ +I  +CK      A +LL    
Sbjct: 930  YTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---R 986

Query: 518  EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              G+ P I  YS+ +  LC++    +A  ++ +M     +P + ++  L  A
Sbjct: 987  SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATA 1038



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 197/397 (49%), Gaps = 7/397 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++ +LI G C+AG +  AF    +  + GF P VV Y+++IDG C++ ++++   L  ++
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G      TY  L+  L   G  K+ F   E+M  NG  P L T+  +I   C EG++
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              F++ DEM  R    +V  +  L+  LC+  RV EA     Q+ + G +P+ +TYN +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG   AG  + A  +   L  +  SP+V T+ + +   SKAGN   A +    M + G+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P+ VTY  LID   ++  ++ A     L++       ++ +  L+HGLC    ++EA +
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIAL---GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L  +M      PN V +N ++ G C+      A  L   M E G   ++ +Y+  +  LC
Sbjct: 300 LLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 537 QDGKWPEAEVLLNQMLKL-GLKPSVSLYNILYRAKNN 572
           +  + PEA   +  M +  G  P+V  ++ L +   N
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCN 393



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 225/495 (45%), Gaps = 42/495 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
            + S++D   K +    A   F + L+ G RP   T+++L+  + K    D+     +   
Sbjct: 511  FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 570

Query: 166  ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            E  C+     YS   ++ G  + G +  A  VL Q+ + G  P+ V Y +LIDG  K   
Sbjct: 571  ELGCRANTVTYS--TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +  A  L R++ E G   +  TYT L  GL ++G   +  E  + M   G +P+  TY+ 
Sbjct: 629  LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688

Query: 286  LIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++   C  G+V+E    F++M R   VA +V+ Y+ LI GLCK  R+ EA   L++M  A
Sbjct: 689  IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            G  P+V+T++ LI+G CDAG  D    LF  +   G    +  YN +I A+   G    A
Sbjct: 749  GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808

Query: 405  SDLVREMEERGITPS---------------------------------EVTYTILIDSFV 431
              L+ EM+  GI  +                                 E++Y  LI S V
Sbjct: 809  YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLV 868

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             S   E+A E+   M   G SPD   Y  ++ GL   G+ + A+KL   M      P+  
Sbjct: 869  ASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLR 928

Query: 492  VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
             Y +MI G  K      A     EM  K L P+   YSS I   C+  K  +A  LL   
Sbjct: 929  TYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSS 988

Query: 552  LKLGLKPSVSLYNIL 566
               G++P++++Y+ +
Sbjct: 989  ---GIEPTITMYSTM 1000



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 204/449 (45%), Gaps = 48/449 (10%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFS 165
            Y ++ID   K +   +A+    +ML++G  P   T+ +L   + +S  FD+      + +
Sbjct: 616  YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 675

Query: 166  ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG----FSPNVVIYTSLIDGCC 221
               C      YS   ++ G C+AG   +  E L   E+M      +P+V+ Y++LIDG C
Sbjct: 676  ARGCAPNAITYSS--IVDGLCKAG---RVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 730

Query: 222  KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
            K G I+ A     ++   G +    T+++LI GL   G    G E +  M   G    +Y
Sbjct: 731  KAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIY 790

Query: 282  TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT------------------------ 317
             YN +I+ YC +G+ S  + L +EM+   +A N VT                        
Sbjct: 791  AYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850

Query: 318  ---------YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                     YNTLI  L    R ++A  LL  M   G SP+   Y  ++DG   AG  + 
Sbjct: 851  PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEV 910

Query: 369  AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
            A +L  +++S G SP + TY ++I   SKA    +A D   EM  + + P  + Y+ LID
Sbjct: 911  AAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLID 970

Query: 429  SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            +F ++D ++ A   + L++ SG  P +  Y  ++  LC      +A ++   M     EP
Sbjct: 971  AFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEP 1027

Query: 489  NDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
               ++  +   Y  EG    A++L+ ++ 
Sbjct: 1028 GIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 181/360 (50%), Gaps = 6/360 (1%)

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +V Y  LI+G CK G +  A   FRK  + G   T  TY+ +I GL ++     G +  E
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M   G +P+  TYN L++    +G+  E F L + M        ++T+  +I GLCKE 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            ++ A R++D+M   G  P+V  +  L+   C+ G  D+A+  F Q+   G +P  VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            ++    KAG  + A  +++ + E   +P+  T+TI +D   ++ ++  A+E +  M ++
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G SP+  TY  LI GLC  G +  A  L     +   +     ++ ++ G C+      A
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++LL  M     VPN+  ++S +  LCQ  +  EA  L + M + G    V  YNIL + 
Sbjct: 298 IQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 203/386 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E D Y++  LI+G C  G  + A  VL+ +   G  P+VV YT L++  CK    ++A 
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY V++ G+ + G   D  EF + +   G  P+  +YN ++   
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +  +  KL  EM  +    NVVT+N LI  LC+   V+ A  +LDQ+   G +PN 
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN ++  FC   + D+A      + S+G  P +V+YN L+ A  + G    A +L+ +
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++G TP  ++Y  +ID   ++   E+A E+ + M   G  PD+ TY  +  GLC +G 
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGR 447

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++EA K F  + +  + PN V+YN ++ G CK   ++ A+ L   M   G +PN ++Y+ 
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTI 507

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            I  L  +G   EA  ++ ++   G+
Sbjct: 508 LIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 229/472 (48%), Gaps = 23/472 (4%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
           +PS   P T          A  K RL+   L Y   +  + V  RS   N  L  +++  
Sbjct: 24  YPSLPTPKT----------AAPKPRLN---LAYAGAVAPNAVPHRSAASNDRLRVLVRRG 70

Query: 156 SFDKGWLFFSENRCKVELDVYS-FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
             ++  +   E+   +E         LIK  C +G   +A  VL   E     P+V+ Y 
Sbjct: 71  DLEEA-IRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCE-----PDVMSYN 124

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +++ G C  G ++ A+   R +  + +    +TY  LI GL   G   +     + M   
Sbjct: 125 AMVAGYCVTGQLDNAR---RLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR 181

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P + TY  L+   C      +  KL DEMR +  A ++VTYN ++ G+C+E RV +A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
              L  +   G  PN ++YN ++ G C A   + A +L  ++   G+ P+VVT+N+LI  
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             + G  + A +++ ++ + G TP+ ++Y  ++ +F +   M++A     LM  SG  PD
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + +Y  L+  LC  G +  A +L + + +    P  + YN +I G  K G +  AL LL 
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EM  KGL P+I +YS+    LC++G+  EA     ++  +G++P+  LYN +
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 172/373 (46%), Gaps = 34/373 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++A  K     QA+    +M D G  P                             
Sbjct: 190 YTILLEATCKRSGYKQAVKLLDEMRDKGCAP----------------------------- 220

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                D+ ++ +++ G C+ G ++ A E L  L   G  PN V Y  ++ G C     E 
Sbjct: 221 -----DIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWED 275

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ L  ++   G      T+ +LI  L + GL +   E  +++   G +P+  +YN ++H
Sbjct: 276 AEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILH 335

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C + K+       + M       ++V+YNTL+  LC+   V  A  LL Q+K  G +P
Sbjct: 336 AFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 395

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +I+YN +IDG   AG+T++A  L N++ + G  P ++TY+ +     + G  + A    
Sbjct: 396 VLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAF 455

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            ++++ GI P+ V Y  ++    +      A ++++ M  +G  P+  TY +LI GL  +
Sbjct: 456 CKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYE 515

Query: 469 GNMKEASKLFNSM 481
           G +KEA ++   +
Sbjct: 516 GLVKEAREMMAEL 528



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 11/316 (3%)

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLY-TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           L + G  ++     E M   G+ PS       LI + C  G+ +E  ++           
Sbjct: 66  LVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLASCEP----- 118

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +V++YN ++ G C   ++  A RL+  M M    P+  TYN LI G C  G TD A  + 
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAVL 175

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G  P VVTY +L+ A  K    K A  L+ EM ++G  P  VTY ++++   + 
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             ++ A E    +   G  P+  +Y +++ GLC     ++A KL   M      PN V +
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           NM+I   C+ G    A+ +L ++ + G  PN  SY+  +   C+  K   A   +  M+ 
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 554 LGLKPSVSLYNILYRA 569
            G  P +  YN L  A
Sbjct: 356 SGCYPDIVSYNTLLTA 371



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 1/204 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+ A  K +  D+A+ +   M+ SG  P   ++N+LL  + +    D       + +
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 169 CKVELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    V  S+  +I G  +AG   +A E+LN++   G  P+++ Y+++  G C+ G IE
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F K+ ++G+      Y  ++ GL K        + +  M  NG  P+  TY  LI
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 288 HEYCNEGKVSEGFKLFDEMRHREV 311
                EG V E  ++  E+  R V
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRGV 533



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/171 (18%), Positives = 71/171 (41%), Gaps = 36/171 (21%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++ A  +    D A+   HQ+ D G  P   ++N+++  + K+   ++     +E  
Sbjct: 365 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMV 424

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-------------- 213
            K ++ D+ ++  +  G C  G + +A +   ++++MG  PN V+Y              
Sbjct: 425 TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATH 484

Query: 214 ---------------------TSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                                T LI+G    G ++ A+ +  ++   G+V+
Sbjct: 485 SAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVS 535


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 172/640 (26%), Positives = 281/640 (43%), Gaps = 115/640 (17%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC---HLTQLF 96
           L  TP    I++R   +KM          ++   I     SS  +  S+     H+ + F
Sbjct: 39  LAATPTMACILVR---AKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAF 95

Query: 97  PS-----SSNPVTKS--RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           P      S  P  K    LY  ++++ ++ R  +   + +  M+  G+ P + TFN L+ 
Sbjct: 96  PQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIR 155

Query: 150 FVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            +  S   D     F E     CK   + ++FGIL++G C+AG  +K  E+LN +E  G 
Sbjct: 156 ALCDSSCVDAARELFDEMPEKGCKP--NEFTFGILVRGYCKAGLTDKGLELLNSMESFGV 213

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            PN V+Y +++   C+ G  + ++ L  K+ E GLV    T+   I  L K G   D   
Sbjct: 214 LPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273

Query: 267 FYEKMQLNGV----SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            +  M+L+       P+  TYN ++  +C  G + +   LF+ +R  +   ++ +YN  +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWL 333

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GL +  +  EAE +L QM   GI P++ +YN L+DG C  G    A  +   +K NG S
Sbjct: 334 QGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVS 393

Query: 383 PSVVTY-----------------------------------NVLIRAFSKAGNSKMASDL 407
           P  VTY                                   N+L+ +    G    A +L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEEL 453

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS--------------- 452
           +R+M E+G     VT  I++D    S +++KA E+   M+  G +               
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 453 --------PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                   PD+ TY  L++GLC  G   EA  LF  M   KL+P+ + YN+ I  +CK+G
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQG 573

Query: 505 ---NSYRALR--------------------------------LLGEMNEKGLVPNIASYS 529
              +++R L+                                L+ EM EKG+ PNI +Y+
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + I  LC+ GK  +A  LL++M++  + P+V  +  L  A
Sbjct: 634 TAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGA 673



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 207/462 (44%), Gaps = 36/462 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +I+ +  +   +D +     +M + G+ P   TFNS +  + K          FS+ 
Sbjct: 219 VYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD- 277

Query: 168 RCKVELDVY---------SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
              +ELD Y         ++ +++KG C+ G L  A  +   + E     ++  Y   + 
Sbjct: 278 ---MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQ 334

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G  ++G    A+ + +++ + G+  + ++Y +L+ GL K G+  D       M+ NGVSP
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSP 394

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TY CL+H YC+ GKV     L  EM       N  T N L+  L    R+ EAE LL
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS---------------- 382
            +M   G   + +T N ++DG C +GE DKA  +   ++ +G +                
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514

Query: 383 -------PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
                  P ++TY+ L+    KAG    A  L  EM    + P  + Y I I  F +   
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGK 574

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  AF +   M+K G    + TY  LI GL +K  + E   L + M E  + PN   YN 
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNT 634

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            I   C+ G    A  LL EM +K + PN+ S+   IG  C+
Sbjct: 635 AIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK 676



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 4/311 (1%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            Y+ M L G+SP  YT+N LI   C+   V    +LFDEM  +    N  T+  L+ G C
Sbjct: 134 LYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K     +   LL+ M+  G+ PN + YN ++  FC  G  D + +L  +++  G  P +V
Sbjct: 194 KAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIV 253

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEER---GIT-PSEVTYTILIDSFVRSDDMEKAFEM 442
           T+N  I A  K G    AS +  +ME     G+  P+ +TY +++  F +   +E A  +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  ++++     + +Y + + GL   G   EA  +   M +  + P+   YN+++ G CK
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    A  ++G M   G+ P+  +Y   +   C  GK   A+ LL +M++    P+   
Sbjct: 374 LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 563 YNILYRAKNNI 573
            NIL  +  N+
Sbjct: 434 CNILLHSLWNM 444



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 201/462 (43%), Gaps = 31/462 (6%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L Q+      P   S  Y  ++D   K  +   A      M  +GV P + T+  LL   
Sbjct: 349 LKQMIDKGIGPSIYS--YNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406

Query: 152 IKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
                 D       E   N C    + Y+  IL+      G +++A E+L ++ E G+  
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLP--NAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGL 464

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFR--------KIGELG---------------LVATQ 245
           + V    ++DG C +G++++A  + +         +G LG                +   
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY+ L+ GL K G   +    + +M    + P    YN  IH +C +GK+S  F++  +
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  +    ++ TYN+LI GL  + ++ E   L+D+M+  GISPN+ TYN  I   C+ G+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGK 644

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            + A  L +++     +P+V ++  LI AF K  +  MA + V E         E  Y++
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQE-VFETAVSICGQKEGLYSL 703

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           + +  + +  + KA E+   +   GF    + Y  L+  LC K  ++ AS + + M +  
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKG 763

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              +      +I G  K GN   A     +M E   V  +A+
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVAN 805



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 203/461 (44%), Gaps = 35/461 (7%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILI 182
           +A     QM+D G+ P   ++N L+  + K     D   +     R  V  D  ++G L+
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  G ++ A  +L ++      PN      L+      G I  A+ L RK+ E G  
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-----------------------PS 279
               T  +++ GL  +G      E  + M+++G +                       P 
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           L TY+ L++  C  G+ +E   LF EM   ++  + + YN  I   CK+ ++  A R+L 
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLK 583

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M+  G   ++ TYN LI G     +  +   L ++++  G SP++ TYN  I+   + G
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGG 643

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM-----QKSGFSPD 454
             + A++L+ EM ++ I P+  ++  LI +F +  D + A E++        QK G    
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL--- 700

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
              Y ++ + L   G + +A++L  ++ +   E    +Y  ++   CK+     A  +L 
Sbjct: 701 ---YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILH 757

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +M +KG   + A+    I  L + G   EA     +M+++ 
Sbjct: 758 KMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMA 798


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 217/406 (53%), Gaps = 1/406 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F  ML     P    F+ L   +++   ++       E     +E D++S  IL
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++    VL+++ ++G  P++V +T+L++G C  G +++  ML+  +   GL
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +TY V+I  L K+G   +   F ++M+  G  P++  Y+ LI  YC  G++ E   
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +FD M  +    NV TY +L+ G CK  R++EA +LLD+    G+ P+++T+  +I G C
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            AG    A +LF  + ++G +P+++TY VL+    K GN + A  L +EM+   + P+ V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YTILIDS  +   ++   E++S +   G  P+VYTY  L+  LC +G + EA KLF  M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            E    P+   YN++I G+ +  +   A +L+ EM  +G   + A+
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDG 264
           P +V ++ L     + G  E    L ++I  LG+    H+ ++LI   C L +      G
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDF---G 116

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                K+   G+ PS+ T+  L++  C EGK+ +   L+D+M  R +  NV TYN +I  
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L K  +  EA   L QM+  G  PNV+ Y+ LIDG+C  G+ D+A  +F+ + S G +P+
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V TY  L+  + K    + A  L+ E   +G+ P  VT+T +I    R+     A +++ 
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            +   G +P++ TYGVL+ GLC  GN++EA  LF  M  + ++PN V+Y ++I   CK G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                  L   + ++GL PN+ +Y++ +G LC++G   EA  L  +M + G  P    YN
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416

Query: 565 ILYRA 569
           ++ + 
Sbjct: 417 VIIQG 421



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 187/392 (47%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  F  L       G       +  ++E +G   ++   + LI+  C    ++    +  
Sbjct: 62  IVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LGL  +  T+T L+ GL   G        Y+ M + G+ P++YTYN +I+     G
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K +E      +M       NVV Y+TLI G C   ++ EA  + D M   G +PNV TY 
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L++G+C     ++A +L ++    G  P +VT+  +I    +AG    A  L R +   
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G TP+ +TY +L+D   +  ++E+AF ++  MQ+S   P++  Y +LI  LC  G +K+ 
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF+ + +  L+PN   Y  ++   CKEG    A +L  +M E G  P+  +Y+  I  
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQG 421

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             Q      A  L+ +M+  G     +   +L
Sbjct: 422 FLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 1/307 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           DQ +  +  ML  G++P   T+N ++  + KS   ++   F  +  +     +V ++  L
Sbjct: 149 DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTL 208

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C  G +++A  V + +   G +PNV  YTSL++G CK   IE A  L  +    GL
Sbjct: 209 IDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGL 268

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    T+T +I GL + G      + +  +  +G +P++ TY  L+   C  G + E F 
Sbjct: 269 VPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM+   V  N+V Y  LI  LCK  ++++ + L  ++   G+ PNV TY  L+   C
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALC 388

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A +LF +++ +G +P    YNV+I+ F +  +  MA  LV EM  RG +    
Sbjct: 389 KEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAA 448

Query: 422 TYTILID 428
           T  +L D
Sbjct: 449 TRALLND 455



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 151/306 (49%)

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
           + D    +  M L    P +  ++ L       G       L  E+    +  ++ + + 
Sbjct: 43  KDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSI 102

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI   C   RV     +L ++   G+ P+++T+  L++G C  G+ D+   L++ +   G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P+V TYNV+I + SK+G +  A   +++ME+ G  P+ V Y+ LID +     M++A 
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++ LM   G +P+VYTY  L++G C    ++EA +L +      L P+ V +  +I G 
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G    A +L   +   G  PNI +Y   +  LC+ G   EA  L  +M +  +KP++
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342

Query: 561 SLYNIL 566
            +Y IL
Sbjct: 343 VIYTIL 348



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 34/283 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID +      D+A   F  M+  G  P                             
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTP----------------------------- 235

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                +VY++  L+ G C+   + +A ++L++    G  P++V +T++I G C+ G    
Sbjct: 236 -----NVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ LFR I   G      TY VL+ GL K+G  ++ F  +++MQ + V P+L  Y  LI 
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  GK+ +G +LF  +    +  NV TY  L+  LCKE  + EA +L  +M+  G +P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           +   YN +I GF    +   A +L  ++ + G S    T  +L
Sbjct: 411 DKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 101/210 (48%)

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D A   F  +      P +V ++ L  +  + G+ +    L +E+E  GI     + +
Sbjct: 42  DKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           ILI+ F     ++    + S + K G  P + T+  L++GLCM+G M +   L++ M   
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+PN   YN++I    K G +  AL  L +M + G VPN+ +YS+ I   C  G+  EA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             + + M+  G  P+V  Y  L      IE
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIE 251


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 208/405 (51%), Gaps = 6/405 (1%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R   E D  ++ + I G C+A  ++ AF++L +++E    P  V YT+L+DG  K G ++
Sbjct: 35  RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 94

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++ E G   T  TYTV+I GL K G  ++    +  M  NG  P  + Y  LI
Sbjct: 95  EAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 154

Query: 288 HEYCNEGKVSEGFKLFDEM----RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              C  GK  E + L+ E      H     +VVTY +LI GLCK  R+ EA ++ D   +
Sbjct: 155 KGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAV 214

Query: 344 A-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G  P+ +TY  +IDG C  G  ++    F+++++ G  P  VTY  LI  F KA    
Sbjct: 215 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 274

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  + R+M + G   S VTY I++D   ++  + +A+  +  M++ G    V TY  L+
Sbjct: 275 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 334

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C +GN+  A +LF  M +   EPN V YN++I G C+ G   +A     ++ ++ L 
Sbjct: 335 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 394

Query: 523 PNIASYSSTIGVLCQD-GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P++ ++++ +  LCQ      +   L   M+  G  P++  Y+IL
Sbjct: 395 PDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSIL 439



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 195/396 (49%), Gaps = 5/396 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +F ++I G C    L++AF VL +    G  P+ V Y   IDG CK   ++ A  L 
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ E   + T  TYT L+ GL K G   +     E+M   G SP+L TY  +I      
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM----AGISPN 349
           G+V E  ++F +M       +   Y  LI GLCK  + +EA  L  +       A   P+
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185

Query: 350 VITYNKLIDGFCDAGETDKAFRLF-NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           V+TY  LIDG C AG   +A ++F ++    G  P  VTY  +I    K G  +   +  
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  RG  P  VTY  LID F+++  + KA  +Y  M +SG      TY +++ GLC  
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA   F +M E       V Y+ ++ G+C EGN   A+ L   M ++G  PN+ SY
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 365

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  I  LC+ GK  +A     ++L+  L P V  +N
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 401



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 230/502 (45%), Gaps = 46/502 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           +  +I+   + +  D+A     + + +G  P   T+N  +  + K+   D  +       
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E +C      Y+   L+ G  +AG L++A  VL Q+ E G SP +  YT +IDG  K G 
Sbjct: 70  EKKCLPTTVTYT--ALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGR 127

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN----------- 274
           +E A+ +F  +   G       YT LI GL K+G  ++ +  Y++               
Sbjct: 128 VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV 187

Query: 275 -----------------------------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                                        G  P   TY  +I   C  G+V EG + F E
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR+R    + VTY  LI G  K   + +A R+  QM  +G   + +TYN ++DG C AG 
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A+  F  ++  G   +VVTY+ L+  F   GN   A +L R M +RG  P+ V+Y I
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK-GNMKEASKLFNSMWET 484
           +I    R+  + KA+  +  + +    PDVYT+   +HGLC +   + +  +LF SM   
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              PN   Y++++ G C+ G    AL +  EM  +G+ P++  +++ I  LC  G+  EA
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             +  ++ +     + S +++L
Sbjct: 488 LEVFRELERRSAPDAWSYWSLL 509



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 239/532 (44%), Gaps = 26/532 (4%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMS 59
           + +N + R  +L   +AFS+   A R G +    + ++ +              LL KM 
Sbjct: 12  VVINGLCREKRLD--EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
                        ++ G + +        +  L Q+    ++P  K+  Y  +ID   K+
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLD--EAMAVLEQMVEKGNSPTLKT--YTVVIDGLSKA 125

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-----VELD 174
              ++A   F  ML +G RP +  + +L+  + KS   ++ +  + E   +        D
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185

Query: 175 VYSFGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           V ++  LI G C+AG + +A +V  ++  E GF P+ V YTS+IDG CK G +E     F
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G      TY  LI G  K  +       Y +M  +G   S  TYN ++   C  
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V+E +  F  M  R     VVTY+ L+ G C E  V  A  L  +M   G  PN+++Y
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 365

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS-KMASDLVREME 412
           N +I G C AG+  KA+  F +L      P V T+N  +    +  ++     +L   M 
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMV 425

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G +P+  +Y+IL+D   R+  +E A E++  M   G +PDV  +  LI  LC+ G + 
Sbjct: 426 SQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVD 485

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           EA ++F  + E +  P+   Y  ++ G  +      A  L   M  +G  P 
Sbjct: 486 EALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 175/371 (47%), Gaps = 5/371 (1%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           M  SP++V +T +I+G C+   ++ A  +  +    G      TY V I GL K     D
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
            F+  +KM      P+  TY  L+      G++ E   + ++M  +  +  + TY  +I 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS- 382
           GL K  RV+EA R+   M   G  P+   Y  LI G C +G+ ++A+ L+ +  +     
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 383 ---PSVVTYNVLIRAFSKAGNSKMASDLVR-EMEERGITPSEVTYTILIDSFVRSDDMEK 438
              P VVTY  LI    KAG    A  +   E  ERG  P  VTYT +ID   +   +E+
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
             E +  M+  G+ PD  TY  LI G      + +A +++  M ++    + V YN+++ 
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK G    A      M E+G V  + +YS+ +   C +G    A  L  +ML  G +P
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 559 SVSLYNILYRA 569
           ++  YNI+ R 
Sbjct: 361 NLVSYNIIIRG 371



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 178/355 (50%), Gaps = 4/355 (1%)

Query: 109 YESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y S+ID   K+ R+ +    +  + ++ G  P + T+ S++  + K    ++G   F E 
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R +  E D  ++  LI G  +A  + KA  V  Q+ + G   + V Y  ++DG CK G +
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   F  + E G VAT  TY+ L+ G    G      E + +M   G  P+L +YN +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM-RVQEAERLLDQMKMAG 345
           I   C  GK+++ +  F+++  R +  +V T+N  + GLC+ +  V +   L + M   G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            SPN+ +Y+ L+DG C AG  + A  +F ++ S G +P VV +N LIR    AG    A 
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           ++ RE+E R   P   +Y  L+D   R + ME+A  +   M+  G +P  Y   V
Sbjct: 489 EVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHYDLTV 542


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 214/423 (50%), Gaps = 10/423 (2%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGW----LFFSE 166
           I+    K    + AL +  +M +  G  P   TFN+L+  + K+           +   E
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                + DVY++  +I G C+ G++ +A E L+Q+     SPN V Y +LI   CK   +
Sbjct: 325 G---YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQV 381

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L R +   G++    T+  LI GL      +   E +E+M+  G  P  +TYN L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C++GK+ E   +  +M     A +V+TYNTLI G CK  +++EAE + D+M++ G+
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGV 501

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           S N +TYN LIDG C +   + A +L +Q+   GQ P   TYN L+  F + G+ K A+D
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +V+ M   G  P  VTY  LI    ++  +E A ++   +Q  G +   + Y  +I GL 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLF 621

Query: 467 MKGNMKEASKLFNSMWE-TKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPN 524
            K    EA  LF  M E  +  P+ V Y ++  G C  G   R A+  L E+ EKG VP 
Sbjct: 622 RKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 525 IAS 527
            +S
Sbjct: 682 FSS 684



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 224/472 (47%), Gaps = 38/472 (8%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKA 194
           G++P  +TFN L+  + ++       L   +     +  D  +F  +++G  E GDL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG-ELGLVATQHTYTVLIC 253
             +  Q+ E G S + V    ++ G CK G +E A    +++  + G    Q+T+  L+ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G  K   E  + M   G  P +YTYN +I   C  G+V E  +  D+M  R+ + 
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 314 NVVTYNTLICGLCKEMRVQEAERL-----------------------------------L 338
           N VTYNTLI  LCKE +V+EA  L                                    
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           ++M+  G  P+  TYN LID  C  G+ D+A  +  Q++ +G + SV+TYN LI  F KA
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
              + A ++  EME  G++ + VTY  LID   +S  +E A ++   M   G  PD +TY
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+   C  G++K+A+ +  +M     EP+ V Y  +I G CK G    A +LL  +  
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILYRA 569
           KG+     +Y+  I  L +  K  EA  L  +ML+     P    Y I++R 
Sbjct: 604 KGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRG 655



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 212/458 (46%), Gaps = 38/458 (8%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I+++ +  L D+ L   H M+D  G++P ++ +N +L  ++                  
Sbjct: 124 LIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVD----------------- 166

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLN-QLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                             G+  K  E+ + ++   G  P+V  +  LI   C+   +  A
Sbjct: 167 ------------------GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            ++   +   GLV  + T+T ++ G  + G         E+M   G S S  + N ++H 
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 290 YCNEGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
           +C EG+V +      EM +++    +  T+NTL+ GLCK   V+ A  ++D M   G  P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V TYN +I G C  GE  +A    +Q+ +   SP+ VTYN LI    K    + A++L 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R +  +GI P   T+  LI     + +   A E++  M+  G  PD +TY +LI  LC K
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +   M  +    + + YN +I G+CK      A  +  EM   G+  N  +Y
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  LC+  +  +A  L++QM+  G KP    YN L
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 177/368 (48%), Gaps = 12/368 (3%)

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           FSP   +Y  ++    ++G  +  + +   +   G       + +LI    +  LQ +  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEIL 138

Query: 266 EFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-----NVVTYN 319
                M  + G+ P  + YN +++   +        KL  E+ H +++      +V T+N
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVD----GNNLKLV-EIAHAKMSVWGIKPDVSTFN 193

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            LI  LC+  +++ A  +L+ M   G+ P+  T+  ++ G+ + G+ D A R+  Q+   
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF 253

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREME-ERGITPSEVTYTILIDSFVRSDDMEK 438
           G S S V+ NV++  F K G  + A + ++EM  + G  P + T+  L++   ++  ++ 
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+  +M + G+ PDVYTY  +I GLC  G +KEA +  + M      PN V YN +I 
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             CKE     A  L   +  KG++P++ +++S I  LC       A  L  +M   G +P
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433

Query: 559 SVSLYNIL 566
               YN+L
Sbjct: 434 DEFTYNML 441



 Score = 42.7 bits (99), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 2/146 (1%)

Query: 426 LIDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           L+DS     D   A  +++L  +K  FSP+   Y  ++  L   G+  +  K+   M  +
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPE 543
             E     + ++I  Y +       L ++  M ++ GL P+   Y+  + +L        
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
            E+   +M   G+KP VS +N+L +A
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKA 198


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 236/513 (46%), Gaps = 69/513 (13%)

Query: 113 IDAHLKSRLS-----DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           + +H  SR       D ALF FH+ML     P    FN +L    K   +          
Sbjct: 30  LHSHFHSRPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRL 89

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K ++ D ++  ILI   C  G +N AF VL+++ + G+ P+ V  T+LI G C  G +
Sbjct: 90  ELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQV 149

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNG--------------------------- 259
           ++A     K+   G    Q +Y  LI G+ K G                           
Sbjct: 150 KKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTI 209

Query: 260 --------LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
                   L  +    + +M + G+S ++ TY+ +IH +C  GK++E     +EM  + +
Sbjct: 210 IDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAI 269

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF----------- 360
             +V  YNTL+  L KE +V+EA+ +L  +    + PNVITYN LIDG+           
Sbjct: 270 NPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLM 329

Query: 361 ----------------CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
                           C     ++A  L+ ++      P+ VTYN LI    K+G    A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL+ EM +RG   + +TY  LI+   ++  ++KA  + + M+  G  PD+YT  +L+HG
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449

Query: 465 LCMKGN-MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           L  KG  +K A  LF  + +    PN   YN++I+G+CKEG    A  L  +M + G  P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           N  ++   I  L + G+  +AE LL +M+  GL
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 27/325 (8%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +++L  + P  +T N LI+ +C+ G+++  F +  ++       + VT  TLI GLC +
Sbjct: 87  RRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLK 146

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            +V++A    D++   G   + ++Y  LI+G C  GET  A +L  ++      P+VV Y
Sbjct: 147 GQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMY 206

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N +I    K      A +L  EM  +GI+ + VTY+ +I  F     + +A    + M  
Sbjct: 207 NTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVL 266

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY-------- 500
              +PDVY Y  L+  L  +G +KEA  +   + +T L+PN + YN +I GY        
Sbjct: 267 KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAV 326

Query: 501 -------------------CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                              CK      AL L  EM++K +VPN  +Y+S I  LC+ G+ 
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L+++M   G   +V  YN L
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSL 411



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 45/346 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K +L  +A   F +M   G+     T+++++          +   F +E 
Sbjct: 205 MYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEM 264

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  DVY +  L+    + G + +A  VL  + +    PNV+ Y +LIDG       
Sbjct: 265 VLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG------- 317

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             AK +F  +G +G+     +Y ++I  L K    ++    Y++M    + P+  TYN L
Sbjct: 318 -YAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++S  + L DEM  R    NV+TYN+LI GLCK  ++ +A  L+++MK  GI
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436

Query: 347 SP------------------------------------NVITYNKLIDGFCDAGETDKAF 370
            P                                    NV TYN +I G C  G  D+A+
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
            L ++++ +G SP+ +T+ ++I A  + G +  A  L+ EM  RG+
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 105/223 (47%)

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P +I +NK++D F           L  +L+     P   T N+LI  F   G   +A  
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ ++ + G  P  VT T LI        ++KA   +  +   GF  D  +YG LI+G+C
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G  + A +L   +     EPN V+YN +I   CK      A  L  EM+ KG+  N+ 
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +YS+ I   C  GK  EA   LN+M+   + P V +YN L  A
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDA 282



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 35/210 (16%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S+ID   KS     A     +M D G      T+NS              
Sbjct: 365 NMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNS-------------- 410

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG- 219
                               LI G C+ G L+KA  ++N++++ G  P++     L+ G 
Sbjct: 411 --------------------LINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGL 450

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK   ++ A+ LF+ + + G     +TY ++I G  K GL  + +    KM+ +G SP+
Sbjct: 451 LCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPN 510

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
             T+  +I     +G+  +  KL  EM  R
Sbjct: 511 AITFKIIICALLEKGETDKAEKLLCEMIAR 540


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 223/427 (52%), Gaps = 9/427 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFFSENRCKV--ELDVYSFGILIKGC 185
           ++L  G  P + TFN+L    IK    +   K  L F ++   +   LD +S+G LI G 
Sbjct: 128 KILKMGYEPDTITFNTL----IKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGL 183

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G+   A ++L +++      NVV+Y ++ID  CK+  +  A  L+ ++    +    
Sbjct: 184 CKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDV 243

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T++ LI G    G  ++ F  + +M L  ++P  YT+N L+   C EG +     +   
Sbjct: 244 VTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVV 303

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    V  NVVTY++L+ G C   +V +A+ +L+ +   G +PN  +Y  +I+GFC    
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A  LFN ++  G +P  VTYN LI    K+G    A +LV EM + G   +  TY  
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LID+  ++  +++A  +   ++  G  PD+YT+ +LI+GLC  G +K A  +F  +    
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              N   YN+M+ G CKEG    A  LL +M++ G++P+  +Y + I  L    +  +AE
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543

Query: 546 VLLNQML 552
            LL +M+
Sbjct: 544 KLLREMI 550



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 215/431 (49%), Gaps = 35/431 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+++F ILI   C   ++N AF ++ ++ +MG+ P+ + + +LI G C NG ++ A    
Sbjct: 102 DIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFH 161

Query: 234 RKIGELGLVATQHTYTVLICGLFKNG---------------------------------- 259
             +  LG    Q +Y  LI GL K G                                  
Sbjct: 162 DHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKH 221

Query: 260 -LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
            L  D +E Y +M    +SP + T++ LI+ +C  G++ E F LF EM  + +  +  T+
Sbjct: 222 KLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF 281

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  LCKE  ++ A+ +L  M   G+ PNV+TY+ L+DG+C   + +KA  + N +  
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P+  +Y  +I  F K      A  L  +M+ +GI P +VTY  LID   +S  +  
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A+E+   M  +G   +++TY  LI  LC   ++ +A  L   + +  ++P+   +N++I+
Sbjct: 402 AWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIY 461

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G CK G    A  +  ++  KG   N  +Y+  +  LC++G + EAE LL++M   G+ P
Sbjct: 462 GLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIP 521

Query: 559 SVSLYNILYRA 569
               Y  L +A
Sbjct: 522 DAVTYETLIQA 532



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 198/373 (53%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  +LE  G +P++  +  LI+  C   ++  A  +  KI ++G      T+  LI 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL  NG  K+   F++ +   G     ++Y  LI+  C  G+     ++  ++  + V  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVV YNT+I  LCK   V +A  L  QM    ISP+V+T++ LI GFC  G+ ++AF LF
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++     +P   T+N+L+ A  K GN K A +++  M + G+ P+ VTY+ L+D +   
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           + + KA  + + + + G +P+ ++Y  +I+G C    + EA  LFN M    + P+ V Y
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G CK G    A  L+ EM++ G   NI +Y+  I  LC++    +A  L+ ++  
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 554 LGLKPSVSLYNIL 566
            G++P +  +NIL
Sbjct: 447 QGIQPDMYTFNIL 459



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 36/346 (10%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K +L   A   + QM+   + P   TF++L+         ++ +  F E 
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  D Y+F IL+   C+ G+L  A  +L  + + G  PNVV Y+SL+DG C    +
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP-------- 278
            +AK +   I ++G     H+Y  +I G  K  +  +    +  MQ  G++P        
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389

Query: 279 ---------------------------SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
                                      +++TYNCLI   C    V +   L  +++ + +
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             ++ T+N LI GLCK  R++ A+ +   +   G S N  TYN +++G C  G  D+A  
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           L +++  NG  P  VTY  LI+A      ++ A  L+REM  R + 
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 253/546 (46%), Gaps = 77/546 (14%)

Query: 23  LPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKIISGRITS 80
           LPPL  FS FN+ ASR   +HT  + S +   L    SSH+  +   +L L IIS     
Sbjct: 77  LPPLSLFSFFNYLASRPPFRHTLHNYSTMAHFL----SSHNLLSQTHSLFLFIIS---KM 129

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
              +  SL+  L Q  P+         +++++I A+  S   + A+     +       +
Sbjct: 130 GHHSSTSLISSLIQTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLV-------K 182

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            N F+      I  C  D                 Y    ++K   + G     +E   +
Sbjct: 183 KNNFS------IPVCGCD-----------------YLLRRVMKLNQQPG---HCWEFYLE 216

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + + G+ PNV ++  L+ G CK GD+  A+M+F +I   GL                   
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGL------------------- 257

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                            PS+ ++N LI  YC    V EGF L   M    ++ +V TY+ 
Sbjct: 258 ----------------RPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSA 301

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI GLCKE RV+EA  L D+M   G+ PN +T+  LIDG C  G+ D A R F  +K  G
Sbjct: 302 LINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRG 361

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P ++TYN LI    + G+ K A  L+ EM   G  P ++T+T L+D   +  DM+ A 
Sbjct: 362 IRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSAL 421

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E+   M + G   D   +  LI GLC  G +++A ++   M     +P+D  Y M+I  +
Sbjct: 422 EIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCF 481

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK+G+     +LL EM   G VP + +Y++ +   C+ G+   A++LL+ ML + + P+ 
Sbjct: 482 CKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPND 541

Query: 561 SLYNIL 566
             +NIL
Sbjct: 542 ITFNIL 547



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 55/395 (13%)

Query: 26  LKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII--SGRITSSSF 83
           + A  +F+  SR+GL+  P  +S     L+S     S    +  +LK +  S RI+   F
Sbjct: 243 MNARMVFDEISRRGLR--PSVVS--FNTLISGYC-RSKNVEEGFVLKSVMESERISPDVF 297

Query: 84  TPRSL---LCHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           T  +L   LC  +++  ++           V     + ++ID   K    D AL  F  M
Sbjct: 298 TYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIM 357

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
            D G+RP                                  D+ ++  LI G C  GDL 
Sbjct: 358 KDRGIRP----------------------------------DLITYNALINGLCRDGDLK 383

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A ++LN++   GF P+ + +T+L+DGCCK+GD++ A  +  ++ E G+      +T LI
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALI 443

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL ++G  +D     + M   G  P   TY  +I  +C +G V  G KL  EM+     
Sbjct: 444 SGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRV 503

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             VVTYN L+ G CK+ +++ A+ LL  M    + PN IT+N L+DG C  G +   F++
Sbjct: 504 PGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSS-VDFKI 562

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           FN  K  G      +Y  L+    K    ++ S L
Sbjct: 563 FNGEK--GLVSDYASYTALVNESIKISKDQLKSVL 595


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 247/486 (50%), Gaps = 15/486 (3%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           +FPSS +          ++D  +K++     +  F  +L+S  RP    +   +   +K 
Sbjct: 513 IFPSSDSLTL-------LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 565

Query: 155 CSFDKGWLFFSENRCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
               KG   F  NR K   +   V+ + +LI G C+   +  A ++ +++      P+++
Sbjct: 566 SDVGKGLELF--NRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLI 623

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y +LIDG CK+G+ E++  +  ++    +  +  T+  L+ GLFK G+ +D      +M
Sbjct: 624 TYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEM 683

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           +  G  P  +T++ L   Y +  K      +++      +  N  T + L+  LCKE ++
Sbjct: 684 KDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQI 743

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           ++AE +L +    G+ PN + YN +IDG+   G+   A    + ++  G  P  + YN L
Sbjct: 744 EKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL 803

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           IR F + G+ + A   V +M+ +G++PS  TY ILI  + R  + +K F++   M+ +G 
Sbjct: 804 IRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGT 863

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+V +YG LI+ LC    + EA  +   M +  + PN  +YNM+I G C +G    A R
Sbjct: 864 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFR 923

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YR 568
              EM +KG+  N+ +Y++ I  L  +GK  EAE +L ++ + GLKP V  YN L   YR
Sbjct: 924 FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983

Query: 569 AKNNIE 574
              N++
Sbjct: 984 FAGNVQ 989



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 233/462 (50%), Gaps = 5/462 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
            + +++    K+ + + A     +M D G  P + TF+ L      +   D    ++ +  
Sbjct: 660  FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               ++++ Y+  IL+   C+ G + KA E+L +    G  PN V+Y ++IDG  + GD+ 
Sbjct: 720  DSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV 779

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A+M    + + G+      Y  LI    + G  ++  +   KM+L GVSPS+ TYN LI
Sbjct: 780  GARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              Y  + +  + F L  EM       NVV+Y TLI  LCK  ++ EA+ +   M+  G+S
Sbjct: 840  GGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 899

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            PNV  YN LIDG C  G+ + AFR   ++   G   ++VTYN LI   S  G    A D+
Sbjct: 900  PNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDM 959

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            + E+  +G+ P   TY  LI  +  + ++++   +Y  M+ SG  P + TY +LI  LC 
Sbjct: 960  LLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCT 1018

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            K  ++   K+F  M    L+P+ +VYN ++  Y   G+  +A  L  +M EK +  +  +
Sbjct: 1019 KEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTT 1075

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I    + GK  E   L+++M    ++P    Y+I+ + 
Sbjct: 1076 YNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKG 1117



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 222/460 (48%), Gaps = 9/460 (1%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y  +ID   K R    A   F +ML   + P   T+N+L+    K  + +K   F    
Sbjct: 589  IYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS--FKVRE 646

Query: 168  RCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            R K   +E  + +F  L+KG  +AG +  A  VL ++++ GF P+   ++ L DG   N 
Sbjct: 647  RMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
              + A  ++    + GL    +T ++L+  L K G  +   E   +    G+ P+   YN
Sbjct: 707  KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             +I  Y  +G +       D M  + +  + + YN LI   C+   ++ AE+ +++MK+ 
Sbjct: 767  TMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLK 826

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            G+SP+V TYN LI G+    E DK F L  +++ NG  P+VV+Y  LI    K      A
Sbjct: 827  GVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 886

Query: 405  SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
              + R+ME+RG++P+   Y +LID       +E AF     M K G   ++ TY  LI G
Sbjct: 887  QIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDG 946

Query: 465  LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            L M G + EA  +   +    L+P+   YN +I GY   GN  R + L  EM   G+ P 
Sbjct: 947  LSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006

Query: 525  IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            + +Y   I +  ++G     E+      ++ L+P + +YN
Sbjct: 1007 LKTYHLLISLCTKEG----IELTKKIFGEMSLQPDLLVYN 1042



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 174/370 (47%), Gaps = 15/370 (4%)

Query: 130  HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEA 188
            ++M   GV P   T+N L+    +   FDK +    E      + +V S+G LI   C+ 
Sbjct: 821  NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKG 880

Query: 189  GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA----KMLFRKIGELGLVAT 244
              L +A  V   +E+ G SPNV IY  LIDGCC  G IE A    + +F+K  EL LV  
Sbjct: 881  SKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLV-- 938

Query: 245  QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              TY  LI GL  NG   +  +   ++   G+ P ++TYN LI  Y   G V     L++
Sbjct: 939  --TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYE 996

Query: 305  EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            EM+   +   + TY+ LI  LC +  ++  +++  +M    + P+++ YN ++  +   G
Sbjct: 997  EMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHG 1052

Query: 365  ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
            + DKAF L  Q+          TYN LI    K G       L+ EM+ R + P   TY 
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYD 1112

Query: 425  ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            I++       D   A+  Y  MQ+ G   DV     L+ GL  +   KEA  + + M   
Sbjct: 1113 IIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172

Query: 485  KLEPNDVVYN 494
            KL   DV+ +
Sbjct: 1173 KL--GDVIVD 1180



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 105/200 (52%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF  L++ G  PS  +  +L+    K    ++  ++   + E    PS+  Y   I
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 559

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            + V+  D+ K  E+++ M+    SP V+ Y VLI GLC    MK+A +LF+ M   +L 
Sbjct: 560 QAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLL 619

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + YN +I GYCK+GN  ++ ++   M    + P++ ++++ +  L + G   +AE +
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679

Query: 548 LNQMLKLGLKPSVSLYNILY 567
           L +M   G  P    ++IL+
Sbjct: 680 LTEMKDQGFVPDAFTFSILF 699



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 35/271 (12%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           + EA  L   ++  GI P+  +   L+D      +      +F  +  +   PS   Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
            I+A  K  +     +L   M+   I+P+   Y +LID   +   M+ A +++  M    
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P + TY  LI G C  GN +++ K+   M    +EP+ + +N ++ G  K G    A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 511 RLLGEMNEKGLVPNIASYS-------------STIGV----------------------L 535
            +L EM ++G VP+  ++S             + +GV                      L
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C++G+  +AE +L + +  GL P+  LYN +
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 42/235 (17%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y S+I  +  +    + +  + +M  SG++P   T++ LLI +      +     F E  
Sbjct: 975  YNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIELTKKIFGEMS 1033

Query: 169  CKVELDVYSFGILIKGCCEA--GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + +L VY+ G+L    C A  GD++KAF +  Q+ E     +   Y SLI G  K G +
Sbjct: 1034 LQPDLLVYN-GVL---HCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 1089

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
               + L                                    ++M+   + P   TY+ +
Sbjct: 1090 CEVRSLI-----------------------------------DEMKAREMEPEADTYDII 1114

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            +  +C        +  + EM+ + +  +V   + L+ GL +E R +EAE ++ +M
Sbjct: 1115 VKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 214/416 (51%), Gaps = 4/416 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++AL + ++  + G  P   TFN+L+  + ++    +G         K  ELDVY++  L
Sbjct: 286 EEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G++++A E+L+ +      PN V Y +LI   CK   +E A  L R +   G+
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+  LI GL     ++   E +E+M+  G  P  +TY+ LI   C+E ++ E   
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM     A NVV YNTLI GLCK  RV +AE + DQM+M G+S + +TYN LI+G C
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +   ++A +L +Q+   G  P   TY  +++ F + G+ K A+D+V+ M   G  P  V
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  LI    ++  ++ A ++   +Q  G       Y  +I  LC +   KEA +LF  M
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            E    P+ + Y ++  G C  G   + A+    EM EKG++P   S+      LC
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 250/545 (45%), Gaps = 37/545 (6%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS 87
           A SLF WAS Q                       +++A  ++  +++     + SF   S
Sbjct: 75  ALSLFQWASAQP----------------------NYSAHPSVFHELLRQLARAGSFD--S 110

Query: 88  LLCHLTQLFPSSSNPVTKSR----LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           +L  L Q+  SS  PV +S     L       HL + ++   LF   +  D  V+P +  
Sbjct: 111 MLTLLRQMH-SSKIPVDESTFLIFLETYATSHHLHAEIN--PLFLLMER-DFAVKPDTRF 166

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +N  L  ++K+          S+     V  DV +F ILI+  C+A  L  A  +L  + 
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G  P+   +T+L+ G  +  D+E A  +   + E G   T  +  VL+ GL K G  +
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286

Query: 263 DGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +   F YE+    G  P   T+N L++  C  G + +G ++ D M  +    +V TYN+L
Sbjct: 287 EALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLCK   + EA  +L  M      PN +TYN LI   C     + A  L   L S G 
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P V T+N LI+      N ++A +L  EM+E+G  P E TY+ILI+S      +++A  
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M+ SG + +V  Y  LI GLC    + +A  +F+ M    +  + V YN +I G C
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K      A +L+ +M  +GL P+  +Y++ +   CQ G    A  ++  M   G +P + 
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 562 LYNIL 566
            Y  L
Sbjct: 584 TYGTL 588



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 222/467 (47%), Gaps = 7/467 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---FFS 165
           +  +I A  K+     A+     M + G+RP   TF +L+   I+    +          
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E+ C  EL   S  +L+ G C+ G + +A   +   EE GF P+ V + +L++G C+ G 
Sbjct: 262 ESGC--ELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGH 317

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I++   +   + E G     +TY  LI GL K G   +  E    M      P+  TYN 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C E  V    +L   +  + V  +V T+N+LI GLC     + A  L ++MK  G
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY+ LI+  C      +A  L  +++ +G + +VV YN LI    K      A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           D+  +ME  G++ S VTY  LI+   +S  +E+A ++   M   G  PD +TY  ++   
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G++K A+ +  +M     EP+ V Y  +I G CK G    A +LL  +  KG+V   
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            +Y+  I  LC+  +  EA  L  +M++ G  P V  Y I++R   N
Sbjct: 618 QAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCN 664



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 143/361 (39%), Gaps = 74/361 (20%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K    + A      +   GV P   TFNSL+  +  + + +     F E +
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D +++ ILI+  C    L +A  +L ++E  G + NVV+Y +LIDG CKN  + 
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG 494

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN----------------GLQKDGFEF---- 267
            A+ +F ++  LG+  +  TY  LI GL K+                GL+ D F +    
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554

Query: 268 ---------------YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                           + M LNG  P + TY  LI   C  G+V    KL   ++ + + 
Sbjct: 555 KYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMV 614

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK----------------- 355
                YN +I  LCK  R +EA RL  +M   G  P+VITY                   
Sbjct: 615 LTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVD 674

Query: 356 -------------------LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
                              L +G C     D   +L N +   G+     T   +IR F 
Sbjct: 675 FTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETS--IIRGFL 732

Query: 397 K 397
           K
Sbjct: 733 K 733


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 224/463 (48%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN--TFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+ LK    D+A     +M   G     N  T+N ++ F+ +    +        
Sbjct: 246 YNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDS 305

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI    E G + K   +  ++E  G  P +V Y ++I G  K+  +
Sbjct: 306 MRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQV 365

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++ F ++  +GL+    TY  ++ G  K G  K+       ++  G++P++ TYN L
Sbjct: 366 EAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 425

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G + E  +L +EM  +    +V TY  L+ G  K   +  A    D+M   G+
Sbjct: 426 IDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGL 485

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G+T KAF+L   +   G  P  VTYNV+I    K GN K A D
Sbjct: 486 QPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKD 545

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+ P  +TYT LI +      + +A ++ + M   G  P V TY +LIH  C
Sbjct: 546 LKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCC 605

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M +  +EPN++ YN++I   C+ G +  A     EM E+GL PN  
Sbjct: 606 RRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKY 665

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C++G W +A  L  +M + G+ P    +N L++ 
Sbjct: 666 TYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 214/406 (52%), Gaps = 2/406 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A L+     +      +M + G+ P   T+N+++  ++KS   +   L F+E R
Sbjct: 317 YNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR 376

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               L D+ ++  ++ G C+AG+L +A  +L  L   G +P V+ Y +LIDG C+ G +E
Sbjct: 377 AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLE 436

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  ++ E G      TYT+L+ G  K        EF+++M   G+ P  + YN  I
Sbjct: 437 EARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI 496

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G   + F+L + M  + +  + VTYN +I GLCK   +++A+ L  +M   G+ 
Sbjct: 497 CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY  LI   C+ G   +A +L N + S+G  PSVVTY +LI    + GN   A   
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGW 616

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R+M + GI P+E+TY +LI +  R+     A+  +  M + G +P+ YTY +LI G C 
Sbjct: 617 FRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +GN  +A +L+  M +  + P+   +N +  G+ K G+ Y A+  L
Sbjct: 677 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYL 721



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 214/437 (48%), Gaps = 4/437 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           GV P     N +L  +  +  +D     + E  + ++E  + ++  L+    + G  ++A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 195 FEVLNQLEEMGFSP--NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
             +L ++E  G     N V Y  +I    + G +E A  L   +  L   A+  TY  LI
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLI 321

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G  +       +M+  G+ P+L TYN +IH      +V      F EMR   + 
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +++TYN+++ G CK   ++EA  LL  ++ AG++P V+TYN LIDG+C  G  ++A RL
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++   G  P V TY +L+    K  N  MA +   EM  +G+ P    Y   I + + 
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D  KAF++  +M   G  PD  TY V+I GLC  GN+K+A  L   M    L+P+ + 
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  +I  +C+ G    A +LL  M   GL P++ +Y+  I   C+ G    A     +ML
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621

Query: 553 KLGLKPSVSLYNILYRA 569
            +G++P+   YN+L  A
Sbjct: 622 DVGIEPNEITYNVLIHA 638



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 136/274 (49%), Gaps = 12/274 (4%)

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLD------QMKMAGISPNVITYNKLIDGFCD 362
           R VAC+ V  +   C  C    +++A R  D      +M    I P ++TYN L+D F  
Sbjct: 197 RVVACHGVAPDVRDCN-CVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 363 AGETDKAFRLFNQLKSNGQSPSV--VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            G  D+A  L  ++++ G    +  VTYNV+I   ++ G+ + A+ LV  M       S 
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASS 314

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL-FN 479
            TY  LI + +    ++K   +   M+  G  P + TY  +IHGL +K    EA++L F 
Sbjct: 315 FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL-LKSEQVEAAQLKFA 373

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M    L P+ + YN M+ GYCK GN   AL LLG++   GL P + +Y++ I   C+ G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
              EA  L  +M++ G  P V  Y IL    + +
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKV 467


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 232/464 (50%), Gaps = 2/464 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K+R    ++    K   +D    +F  M+ +G +P   T+N ++  + K    +     F
Sbjct: 97  KTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLF 156

Query: 165 SENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E + +  + D  ++  +I G  + G L+       +++ M   P+V+ Y SLI+  CK+
Sbjct: 157 EEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKS 216

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G + +    +R++ + GL     +Y+ L+    K  + +   +FY  M+  G  P+ +TY
Sbjct: 217 GKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTY 276

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             L+   C  G +S+ F+L +EM    V  NVVTY  LI GLC   R++EAE+L  +M  
Sbjct: 277 TSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVT 336

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG+ PN+ +YN LI GF  A   D+A  L N+LK  G  P ++ Y   I         + 
Sbjct: 337 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEA 396

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  ++ EM+E GI  + + YT L+D++ +S +  +   +   MQ+      V T+ VLI 
Sbjct: 397 AKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLID 456

Query: 464 GLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           GLC    + +A   F  M  +  L+PN  VY  MI G CKE     A  L  +M ++GLV
Sbjct: 457 GLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLV 516

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+  +Y+S +    + G   EA  L ++M ++G+K  +  Y  L
Sbjct: 517 PDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSL 560



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 190/366 (51%), Gaps = 6/366 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF     +++ LID     G +E A   F K+    +     +   L+    K G + DG
Sbjct: 62  GFGVFDALFSVLID----LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLG-KTDG 116

Query: 265 FE-FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
            + F++ M   G  P+++TYN +I     EG +     LF+EM+ R +  + VTYN++I 
Sbjct: 117 VKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMID 176

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G  K  R+ +     ++MK     P+VITYN LI+ FC +G+  K    + ++K +G  P
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKP 236

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VV+Y+ L+ AF K    + A     +M   G  P+E TYT L+D+  +  ++  AF + 
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLA 296

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M + G   +V TY  LI GLC    MKEA KLF  M    + PN   YN +I G+ K 
Sbjct: 297 NEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKA 356

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
            N  RAL LL E+  +G+ P++  Y + I  LC   K   A+V++N+M + G+K +  +Y
Sbjct: 357 KNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIY 416

Query: 564 NILYRA 569
             L  A
Sbjct: 417 TTLMDA 422



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 206/418 (49%), Gaps = 2/418 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+ID + K    D  +++F +M      P   T+NSL+    KS    KG  F+ E  
Sbjct: 171 YNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMK 230

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ +V S+  L+   C+   + +A +    +  +G  PN   YTSL+D  CK G++ 
Sbjct: 231 QSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLS 290

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E+G+     TYT LI GL      K+  + + KM   GV P+L +YN LI
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALI 350

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +     +    +L +E++ R +  +++ Y T I GLC   +++ A+ ++++M+  GI 
Sbjct: 351 HGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y  L+D +  +G   +   L  +++      +VVT+ VLI    K      A D 
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDY 470

Query: 408 VREME-ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              M  + G+ P+   YT +ID   + + ++ A  ++  M + G  PD   Y  L+ G  
Sbjct: 471 FGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNL 530

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            +GNM EA  L + M E  ++ + + Y  +++G+ +     +A   L EM  + ++P+
Sbjct: 531 KQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 207/483 (42%), Gaps = 79/483 (16%)

Query: 157 FDKGWLFFSENRCKVELDVYS--FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           FD+ W   + N C     V+   F +LI    + G L +A +  ++++     P      
Sbjct: 49  FDELW--STRNVCVPGFGVFDALFSVLI----DLGMLEEATQCFSKMKRFRVFPKTRSCN 102

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            L+    K G  +  K  F+ +   G   T  TY ++I  ++K G  +     +E+M+  
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+ P   TYN +I  Y   G++ +    F+EM+      +V+TYN+LI   CK  ++ + 
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFC-------------------------------DA 363
                +MK +G+ PNV++Y+ L+D FC                               DA
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDA 282

Query: 364 ----GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
               G    AFRL N++   G   +VVTY  LI     A   K A  L  +M   G+ P+
Sbjct: 283 NCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             +Y  LI  FV++ +M++A E+ + ++  G  PD+  YG  I GLC    ++ A  + N
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMN 402

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM----------------------- 516
            M E  ++ N ++Y  ++  Y K GN    L LL EM                       
Sbjct: 403 EMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNK 462

Query: 517 -------------NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                        N+ GL PN A Y++ I  LC++ +   A  L  QM + GL P  + Y
Sbjct: 463 LVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAY 522

Query: 564 NIL 566
             L
Sbjct: 523 TSL 525



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 4/316 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y S++DA+ K   LSD A    ++ML+ GV     T+ +L+  +  +    +    F + 
Sbjct: 276 YTSLVDANCKIGNLSD-AFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V  ++ S+  LI G  +A ++++A E+LN+L+  G  P++++Y + I G C    I
Sbjct: 335 VTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKI 394

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E AK++  ++ E G+ A    YT L+   FK+G   +G    E+MQ      ++ T+  L
Sbjct: 395 EAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454

Query: 287 IHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           I   C    VS+    F  M +   +  N   Y  +I GLCKE +V+ A  L +QM   G
Sbjct: 455 IDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEG 514

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+   Y  L+DG    G   +A  L +++   G    ++ Y  L+  FS+    + A 
Sbjct: 515 LVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKAR 574

Query: 406 DLVREMEERGITPSEV 421
             + EM    I P EV
Sbjct: 575 SFLEEMIGEEILPDEV 590



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 101/226 (44%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P    ++ L     D G  ++A + F+++K     P   + N L+  F+K G +      
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M   G  P+  TY I+ID   +  D+E A  ++  M+  G  PD  TY  +I G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +    F  M     EP+ + YN +I  +CK G   + L    EM + GL PN+ S
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           YS+ +   C++    +A      M ++G  P+   Y  L  A   I
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI 286


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 242/499 (48%), Gaps = 56/499 (11%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVR-----------PRSNTFNSLLIFVIKSCSFDK 159
           S++D  L S L+D      H +LD  VR           P + T N +L+ + ++    +
Sbjct: 135 SVVDT-LLSLLAD------HGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN---RQ 184

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           G L           +V++F I+I   C+ G+L +A  +  +++ MG SP+VV Y SLIDG
Sbjct: 185 GGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDG 244

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             K GD+E  + L  ++ + G  A   TY  LI    K G  +  + ++ +M+  GV  +
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + T++  +  +C EG V E  KLF +MR R +  N  TY +L+ G CK  R+ +A  LLD
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGE---------------------------------- 365
           +M   G+ PNV+TY  ++DG C  G+                                  
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 366 -TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
            +++A  L NQ+K+ G    V  Y  LI    K      A  L+ +M   G+ P+ V YT
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            ++D+  ++    +A  +   +  SGF P+V TY  LI GLC  G++ EA   FN M E 
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L+PN   Y  +I G+CK G+  +A+ L+ EM +KG+  +   Y+S I    +     +A
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604

Query: 545 EVLLNQMLKLGLKPSVSLY 563
             L  +M++ GL+  +  Y
Sbjct: 605 FALKTKMIESGLQLDLYCY 623



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 192/359 (53%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNV  +  +ID  CK G++  A+ LF ++  +G      TY  LI G  K G  ++  + 
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             +M+ +G +  + TYN LI+ +   G++ + +  F EM+ + V  NVVT++T +   CK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           E  VQEA +L  QM++ G+ PN  TY  L+DG C AG  D A  L +++   G  P+VVT
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y V++    K G    A +++  ME  G+  +E+ YT LI     +++ E+A ++ + M+
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G   DV  YG LI GLC    + EA  L + M    L PN V+Y  ++    K G   
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A+ LL ++ + G  PN+ +Y + I  LC+ G   EA    N+M +LGL P+V  Y  L
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 225/466 (48%), Gaps = 36/466 (7%)

Query: 139 PRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   TFN ++ F+ K     +   LF          DV ++  LI G  + GDL +  ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           ++++ + G + +VV Y +LI+   K G +E+A   F ++   G+VA   T++  +    K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            GL ++  + + +M++ G+ P+ +TY  L+   C  G++ +   L DEM H+ +  NVVT
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  ++ GLCKE +V EA+ +L  M+  G+  N + Y  LI G      +++A  L NQ+K
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 378 SNGQS-----------------------------------PSVVTYNVLIRAFSKAGNSK 402
           + G                                     P+ V Y  ++ A  KAG   
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+ ++ + G  P+ VTY  LID   ++  + +A   ++ M++ G  P+V  Y  LI
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C  G++ +A  L N M +  +  + VVY  +I GY K+ N   A  L  +M E GL 
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            ++  Y+  I   C      EA  +L++M+  G+ P  ++YN L R
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIR 663



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 206/409 (50%), Gaps = 1/409 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K    ++A  YF +M   GV     TF++ +    K     +    F++ R
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR 332

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  + + +++  L+ G C+AG L+ A  +L+++   G  PNVV YT ++DG CK G + 
Sbjct: 333 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +   G+ A +  YT LI G F N   +   +   +M+  G+   +  Y  LI
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + KV E   L  +M    +  N V Y T++  L K  +  EA  LL ++  +G  
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  LIDG C AG   +A   FN+++  G  P+V  Y  LI  F K G+   A  L
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM ++G++  +V YT LID +++  +++ AF + + M +SG   D+Y Y   I G C 
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
              M+EA  + + M  T + P+  VYN +I  Y K GN   A  L  EM
Sbjct: 633 MNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 170/292 (58%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+++T+N +I   C EG++ E   LF  M+    + +VVTYN+LI G  K   ++E E+L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           + +M+ +G + +V+TYN LI+ F   G  +KA+  F ++K  G   +VVT++  + AF K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  L  +M  RG+ P+E TYT L+D   ++  ++ A  +   M   G  P+V T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y V++ GLC +G + EA  + + M    ++ N+++Y  +I G+    NS RAL LL +M 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            KG+  +++ Y + I  LC+D K  EA+ LL++M   GL+P+  +Y  +  A
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 165/375 (44%), Gaps = 36/375 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + + +DA  K  L  +A+  F QM   G+ P   T+ SL+    K+   D   +   E  
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 367

Query: 169 CK-VELDVYSFGILIKGCCEAGDL-----------------------------------N 192
            + +  +V ++ +++ G C+ G +                                    
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A ++LNQ++  G   +V +Y +LI G CK+  ++ AK L  K+   GL      YT ++
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             LFK G + +      K+  +G  P++ TY  LI   C  G +SE    F++MR   + 
Sbjct: 488 DALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLD 547

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV  Y  LI G CK   + +A  L+++M   G+S + + Y  LIDG+        AF L
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++  +G    +  Y   I  F      + A  ++ EM   GITP +  Y  LI  + +
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667

Query: 433 SDDMEKAFEMYSLMQ 447
             +ME+A  + + M+
Sbjct: 668 LGNMEEASSLQNEME 682



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 1/272 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSE 166
           LY ++I  H  +  S++AL   +QM + G+    + + +L+  + K    D+   L    
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C +  +   +  ++    +AG  ++A  +L+++ + GF PNVV Y +LIDG CK G I
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   F K+ ELGL      YT LI G  K G          +M   G+S     Y  L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y  +  + + F L  +M    +  ++  Y   I G C    +QEA  +L +M   GI
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           +P+   YN LI  +   G  ++A  L N+++S
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +I+DA  K+    +A+   H++LDSG +P   T+ +L+  + K+ S  +    F++ 
Sbjct: 482 IYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   ++ +V ++  LI G C+ G LNKA  ++N++ + G S + V+YTSLIDG  K  ++
Sbjct: 542 RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  K+ E GL    + YT  I G     + ++      +M   G++P    YNCL
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCL 661

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVAC 313
           I +Y   G + E   L +EM     +C
Sbjct: 662 IRKYQKLGNMEEASSLQNEMESVLSSC 688


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 218/448 (48%), Gaps = 8/448 (1%)

Query: 87   SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            SL C + Q     S P+     +  ++    K    D  ++ +H+M + G+     +F +
Sbjct: 590  SLFCEMLQ-----SRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF-T 643

Query: 147  LLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
            +LI     CS     L       K+     + + G L+ G C+     +A  +++ ++  
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 205  GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
            GF PNVVIY ++I+G CKN D+  A  +F  + + G+ A   TY  LI GL  +G   D 
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 265  FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                  M    + P++  +  LI  +  EG + E   L+ EM  R V  NV TYN+LI G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 325  LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             C    + +A+ + D M   G  P+V+TYN LI GFC +   +   +LF ++   G    
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 385  VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
              TYN LI  + +AG   +A  +   M + G++P  VTY IL+D    +  +EKA  M  
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 445  LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
             +QKS    D+ TY ++I GLC    +KEA  LF S+    ++P+ + Y  MI G C++G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 505  NSYRALRLLGEMNEKGLVPNIASYSSTI 532
                A +L   M E G +P+   Y  T+
Sbjct: 1004 LQREADKLCRRMKEDGFMPSERIYDETL 1031



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 186/351 (52%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E  + +FG L+ G C    +  AF ++  + + G+ PNVV+Y +LIDG CKNG++  A  
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++ + GL A   TY  L+ GL  +G   D       M    ++P + T+  LI  + 
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G + E  +L+ EM    V  N VTYN++I GLC   R+ +A++  D M   G  PNV+
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN LI GFC     D+  +LF ++   G +  + TYN LI  + + G  ++A D+   M
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             R +TP  +T+ IL+     + ++E A   +  M++S     +  Y ++IHGLC    +
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           ++A +LF  +    ++P+   Y +MI G CK G    A  L+  M E+G++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 217/443 (48%), Gaps = 1/443 (0%)

Query: 123  DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGIL 181
            D A   F +ML S   P    F  +L  + K   FD   +L+       +  D+YSF IL
Sbjct: 586  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 182  IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            I   C    L+ A  +L ++ ++GF P++V   SL++G C+    + A  L   +   G 
Sbjct: 646  IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 242  VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
            V     Y  +I GL KN    +  E +  M+  G+     TYN LI    N G+ ++  +
Sbjct: 706  VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 302  LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            L  +M  R++  NV+ +  LI    KE  + EA  L  +M    + PNV TYN LI+GFC
Sbjct: 766  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 362  DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              G    A  +F+ + S G  P VVTYN LI  F K+   +    L  EM  +G+     
Sbjct: 826  IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 422  TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            TY  LI  + ++  +  A ++++ M   G SPD+ TY +L+  LC  G +++A  +   +
Sbjct: 886  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             +++++ + + YN++I G C+      A  L   +  KG+ P+  +Y + I  LC+ G  
Sbjct: 946  QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005

Query: 542  PEAEVLLNQMLKLGLKPSVSLYN 564
             EA+ L  +M + G  PS  +Y+
Sbjct: 1006 READKLCRRMKEDGFMPSERIYD 1028



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 218/452 (48%), Gaps = 9/452 (1%)

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
           E +    L S   + A   F +M+ S   P    F  LL        ++   ++FS+   
Sbjct: 40  EKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYET-VIYFSQ--- 95

Query: 170 KVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           K+EL     D+YSF ILI   C    L+ A  VL ++ ++G+ P++V + SL+ G C   
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A  L   + + G       Y  LI GL KNG      E   +M+  G+   + TYN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+   C  G+ S+  ++  +M  R +  +VVT+  LI    K+  + EA+ L  +M  +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + PN +TYN +I+G C  G    A + F+ + S G  P+VVTYN LI  F K       
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L + M   G      TY  LI  + +   +  A +++  M     +PD+ T+ +L+HG
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+ G ++ A   F+ M E++     V YN+MI G CK     +A  L   +  +G+ P+
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             +Y+  I  LC++G   EA+ L+ +M + G+
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 164/300 (54%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            Y KM+  G+S  LY++  LIH +C   ++S    L  +M       ++VT  +L+ G C
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 685

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  R QEA  L+D M   G  PNV+ YN +I+G C   + + A  +F  ++  G     V
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN LI   S +G    A+ L+R+M +R I P+ + +T LID+FV+  ++ +A  +Y  M
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 805

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    P+V+TY  LI+G C+ G + +A  +F+ M      P+ V YN +I G+CK    
Sbjct: 806 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++L  EM  +GLV +  +Y++ I   CQ GK   A+ + N+M+  G+ P +  YNIL
Sbjct: 866 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 163/300 (54%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F +KM+L G+S  LY++  LIH +C   ++S    +  +M       ++VT+ +L+ G C
Sbjct: 93  FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
              R+ +A  L+  M  +G  PNV+ YN LIDG C  GE + A  L N+++  G    VV
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L+     +G    A+ ++R+M +R I P  VT+T LID FV+  ++++A E+Y  M
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +S   P+  TY  +I+GLCM G + +A K F+ M      PN V YN +I G+CK    
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++L   M+ +G   +I +Y++ I   CQ GK   A  +   M+   + P +  + IL
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 176/376 (46%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            + AF +  ++ +    P++V +T ++    K    +    L+ K+  LG+    +++T+
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI    +            KM   G  PS+ T   L++ +C   +  E   L D M    
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NVV YNT+I GLCK   +  A  +   M+  GI  + +TYN LI G  ++G    A 
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           RL   +      P+V+ +  LI  F K GN   A +L +EM  R + P+  TY  LI+ F
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
                +  A  M+ LM   G  PDV TY  LI G C    +++  KLF  M    L  + 
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN +I GYC+ G    A ++   M + G+ P+I +Y+  +  LC +GK  +A V++  
Sbjct: 885 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 551 MLKLGLKPSVSLYNIL 566
           + K  +   +  YNI+
Sbjct: 945 LQKSEMDVDIITYNII 960



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 1/310 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           +Y ++ID   K+   + AL   ++M   G+     T+N+LL  +  S  + D   +    
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  DV +F  LI    + G+L++A E+  ++ +    PN V Y S+I+G C +G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             AK  F  +   G      TY  LI G  K  +  +G + +++M   G +  ++TYN L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH YC  GK+     +F  M  R V  +++T+  L+ GLC    ++ A    D M+ +  
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              ++ YN +I G C A + +KA+ LF +L   G  P   TY ++I    K G  + A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477

Query: 407 LVREMEERGI 416
           L+R M+E GI
Sbjct: 478 LIRRMKEEGI 487



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 142/305 (46%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +D F  + +M  +   PS+  +  L+    N  +         +M    ++ ++ ++  L
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   C+  R+  A  +L +M   G  P+++T+  L+ GFC       AF L   +  +G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+VV YN LI    K G   +A +L+ EME++G+    VTY  L+     S     A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           M   M K   +PDV T+  LI     +GN+ EA +L+  M ++ ++PN+V YN +I G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
             G  Y A +    M  KG  PN+ +Y++ I   C+     E   L  +M   G    + 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 562 LYNIL 566
            YN L
Sbjct: 353 TYNTL 357



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 218/564 (38%), Gaps = 121/564 (21%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSF 178
           R SD A      M+   + P   TF +L+   +K  + D+    + E  +  V+ +  ++
Sbjct: 226 RWSDAARM-LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             +I G C  G L  A +  + +   G  PNVV Y +LI G CK   ++    LF+++  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G  A   TY  LI G  + G  +   + +  M    V+P + T+  L+H  C  G++  
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 299 GFKLFDEMRHRE-----VACNVV------------------------------TYNTLIC 323
               FD+MR  E     VA N++                              TY  +I 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL-----FNQLKS 378
           GLCK    +EA+ L+ +MK  GI   +   N   D   +   ++K   L     + + KS
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI---ICQMNAEDDHLEEHSSSNKEISLSLREIWERSKS 521

Query: 379 N----------GQSPSVVTY---------------NVLIRAFSKAGNSKMASDLVR---- 409
           N            S SV  +                 L R+FS A +     + +R    
Sbjct: 522 NPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELH 581

Query: 410 ------------EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
                       EM +    PS V +T ++    + +  +    +Y  M+  G S D+Y+
Sbjct: 582 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 641

Query: 458 YGVLIH-----------------------------------GLCMKGNMKEASKLFNSMW 482
           + +LIH                                   G C     +EA  L +SM 
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                PN V+YN +I G CK  +   AL +   M +KG+  +  +Y++ I  L   G+W 
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  LL  M+K  + P+V  +  L
Sbjct: 762 DAARLLRDMVKRKIDPNVIFFTAL 785



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +  + F LF EM H +   ++V +  L+       R +       +M++ GIS ++ ++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  FC       A  +  ++   G  PS+VT+  L+  F        A  LV  M + 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y  LID   ++ ++  A E+ + M+K G   DV TY  L+ GLC  G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           +++   M +  + P+ V +  +I  + K+GN   A  L  EM +  + PN  +Y+S I  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G+  +A+   + M   G  P+V  YN L
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 130/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  + F LF EM       ++V +  ++  + K  +      L  +M+  GIS ++ ++ 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  FC       A  L  ++   G  PS+VT   L+  F +    + A  LV  M+  
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y  +I+   ++ D+  A E++  M+K G   D  TY  LI GL   G   +A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L   M + K++PN + +  +I  + KEGN   A  L  EM  + +VPN+ +Y+S I  
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            C  G   +A+ + + M+  G  P V  YN L
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 36/322 (11%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---------- 157
            +Y ++I+   K+R  + AL  F+ M   G+R  + T+N+L+  +  S  +          
Sbjct: 711  IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 770

Query: 158  -----DKGWLFFSE---------------------NRCKVELDVYSFGILIKGCCEAGDL 191
                 D   +FF+                       R  V  +V+++  LI G C  G L
Sbjct: 771  VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830

Query: 192  NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
              A  + + +   G  P+VV Y +LI G CK+  +E    LF ++   GLV    TY  L
Sbjct: 831  GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890

Query: 252  ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            I G  + G      + + +M   GVSP + TYN L+   CN GK+ +   + ++++  E+
Sbjct: 891  IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950

Query: 312  ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
              +++TYN +I GLC+  +++EA  L   +   G+ P+ I Y  +I G C  G   +A +
Sbjct: 951  DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010

Query: 372  LFNQLKSNGQSPSVVTYNVLIR 393
            L  ++K +G  PS   Y+  +R
Sbjct: 1011 LCRRMKEDGFMPSERIYDETLR 1032



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 125/558 (22%), Positives = 223/558 (39%), Gaps = 85/558 (15%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LL++M      A       +++G   S  ++  + +  L  +   S NP   +  + ++I
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM--LRDMMKRSINPDVVT--FTALI 253

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
           D  +K    D+A   + +M+ S V P + T+NS                           
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS--------------------------- 286

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
                  +I G C  G L  A +  + +   G  PNVV Y +LI G CK   ++    LF
Sbjct: 287 -------IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++   G  A   TY  LI G  + G  +   + +  M    V+P + T+  L+H  C  
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++      FD+MR  E    +V YN +I GLCK  +V++A  L  ++ + G+ P+  TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I G C  G   +A  L  ++K  G    +   +  +   S +  +K  S  +RE+ E
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSS--NKEISLSLREIWE 517

Query: 414 RGITPS-------EVTYTILIDSFVRSD-------------------------------- 434
           R  +          + ++  +  FVR                                  
Sbjct: 518 RSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR 577

Query: 435 ------DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
                   + AF ++  M +S   P +  +  ++  +           L++ M    +  
Sbjct: 578 NELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 637

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           +   + ++I  +C+      AL LLG+M + G  P+I +  S +   CQ  ++ EA  L+
Sbjct: 638 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 697

Query: 549 NQMLKLGLKPSVSLYNIL 566
           + M   G  P+V +YN +
Sbjct: 698 DSMDGFGFVPNVVIYNTV 715



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 110/212 (51%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF  +   + AF LF ++  +   PS+V +  L+ A +     +      ++ME  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           GI+    ++TILI  F R   +  A  +   M K G+ P + T+G L+HG C+   + +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M ++  EPN VVYN +I G CK G    AL LL EM +KGL  ++ +Y++ +  
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G+W +A  +L  M+K  + P V  +  L
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 119/241 (49%)

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G    +R ++A  L  +M  +   P+++ + +L+    +    +       +++  G S 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            + ++ +LI  F +      A  ++ +M + G  PS VT+  L+  F   + +  AF + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            LM KSG+ P+V  Y  LI GLC  G +  A +L N M +  L  + V YN ++ G C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A R+L +M ++ + P++ ++++ I V  + G   EA+ L  +M++  + P+   Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 564 N 564
           N
Sbjct: 285 N 285



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 120/238 (50%)

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           ++  +A  L  +M  +   P+++ + +++       + D    L++++++ G S  + ++
Sbjct: 583 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +LI  F +     +A  L+ +M + G  PS VT   L++ F + +  ++A  +   M  
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GF P+V  Y  +I+GLC   ++  A ++F  M +  +  + V YN +I G    G    
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A RLL +M ++ + PN+  +++ I    ++G   EA  L  +M++  + P+V  YN L
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 240/503 (47%), Gaps = 55/503 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------- 161
           Y +++D  +K+   ++AL    +M D+G +          + VI + +  +G+       
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKK----------MDVIVATTLMRGYCLRQEVG 314

Query: 162 ----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL---------------- 201
               LF    +  +      +G+LI+GC + G   KA+E+  Q+                
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 202 ----------------EEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                           EEM  S  P+V  Y +LI   C+   +  A  LF ++ + G+  
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           + +TY  L+ G  K G   +  + Y +M + G  P++ TY  L+  Y  +      + L 
Sbjct: 435 SINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL 494

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           DEM+   V+CN  TYN LI G+C   RV E + +L      G  P ++TYN +I+GF  A
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G    AF ++ Q++  G  P+++TY   I  + + G S MA  ++ ++  RG+ P  V Y
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAY 614

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ F +  +M  A ++  ++ K G +P+   Y  LI G      MKE SK + SM +
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             +  +   Y  +I G+ K+GN   AL L  EM  KG +P+  ++++    LC+ G    
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A+ LL +M +L ++P+V +YN+L
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNML 757



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 243/468 (51%), Gaps = 4/468 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++++++ A LK  + + A+  F +M  + + P    +   +  + K     +      E 
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253

Query: 168 RCKVELDV--YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           + +V  D   +++  ++    + G + +A  V +++ + G   +V++ T+L+ G C   +
Sbjct: 254 K-EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQE 312

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  LF++  + G+V T+  Y VLI G  + G+ +  +E   +M   G+ PS +  + 
Sbjct: 313 VGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++    N+ +  +   LF+EM    +  +V TYN LI   C+  +++EA  L D+MK AG
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P++ TYN L+ G+C  G  D+A +L++++   G  P+VVTY  L+R +    +   A 
Sbjct: 432 VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAY 491

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ EM++ G++ ++ TY +LI+     D + +   M       GF P + TY  +I+G 
Sbjct: 492 ALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGF 551

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G M  A  ++  M E  L PN + Y   I GYC+ G S  AL++L ++  +GL P+I
Sbjct: 552 VKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDI 611

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            +Y++ I   CQ+G    A  LL  +LK GL P+  +YN L     N+
Sbjct: 612 VAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNL 659



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 212/421 (50%), Gaps = 6/421 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           ++   L  R    A+  F +M DSG+ P   T+N+L+ +  ++    +   LF    +  
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+  + ++  L+ G C+ G +++A ++ +++   GF PNVV Y +L+ G     D + A 
Sbjct: 432 VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAY 491

Query: 231 MLFRKIGELGLVATQHTYTVLICG--LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
            L  ++ + G+    +TY VLI G  +     + DG    +     G  P++ TYN +I+
Sbjct: 492 ALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGM--LKSFMSEGFIPTMMTYNSIIN 549

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G +   F ++ +MR + +  N++TY + I G C+      A ++L+ ++  G+ P
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQP 609

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +++ YN LI+GFC  G    A +L   L  +G +P+ V YN LI  +      K  S   
Sbjct: 610 DIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFY 669

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M + GI     TYT LID F +  ++  A E+YS M   G+ PD +T+  L HGLC  
Sbjct: 670 ESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRS 729

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G++  A KL   M    + PN  +YNM+I GY ++     A RL  EM   G+ P+  +Y
Sbjct: 730 GDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789

Query: 529 S 529
            
Sbjct: 790 D 790



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 224/467 (47%), Gaps = 8/467 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LF 163
           +Y  +I    +  ++ +A     QM   G+ P  +TF   L  V+K    D+ W      
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP--STFE--LSLVLKGLLNDRRWKDAVCL 389

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F E       DV+++  LI   C+A  L +A  + +++++ G  P++  Y SL+ G CK 
Sbjct: 390 FEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A  L+ ++   G      TY  L+ G        + +   ++M+ NGVS + YTY
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTY 509

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+  C   +V E   +            ++TYN++I G  K   +  A  +  QM+ 
Sbjct: 510 NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ PN+ITY   IDG+C  G +D A ++ N ++  G  P +V YN LI  F + GN   
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  + + G+ P+ V Y  LI  +   + M++  + Y  M K G   D  TY  LI 
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLID 689

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G    GN+  A +L++ M      P+   +  +  G C+ G+   A +LL EM    + P
Sbjct: 690 GFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           N+  Y+  I    +D K  EA  L ++ML +G++P  + Y+IL   K
Sbjct: 750 NVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKK 796



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 183/445 (41%), Gaps = 37/445 (8%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           L   A   +  M+  GV P   +   LLI   +  S       F E R +   +D + F 
Sbjct: 137 LPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+  C + G    A  + +++      P+  +Y   I   CK GD  RA  + R++ E+
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY  ++  L K                                    G++ E 
Sbjct: 257 GFDTCDFTYRTMVDVLVKT-----------------------------------GRMEEA 281

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            ++ DEMR      +V+   TL+ G C    V  A  L  +    GI P  + Y  LI G
Sbjct: 282 LRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRG 341

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
               G T KA+ L  Q+   G  PS    +++++        K A  L  EM + G+ P 
Sbjct: 342 CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PD 400

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TY  LI    ++  + +A  ++  M+K+G  P + TY  L+ G C KG M EA KL++
Sbjct: 401 VFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYS 460

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M     +PN V Y  ++ GY  + +   A  LL EM + G+  N  +Y+  I  +C   
Sbjct: 461 EMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVD 520

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  E + +L   +  G  P++  YN
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYN 545



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 36/362 (9%)

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+V    + T L+    +    KD    + +M+  G     + ++ L+     EG   + 
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCK------------EM------------------ 329
            +LFDEM   E+  +   Y   I  LCK            EM                  
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271

Query: 330 -----RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
                R++EA R+ D+M+ AG   +VI    L+ G+C   E   A  LF +   +G  P+
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            V Y VLIR   + G ++ A +L R+M  +G+ PS    ++++   +     + A  ++ 
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFE 391

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M  SG  PDV+TY  LIH  C    ++EA  LF+ M +  ++P+   YN ++ GYCK+G
Sbjct: 392 EMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A++L  EM  +G  PN+ +Y + +        +  A  LL++M + G+  +   YN
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYN 510

Query: 565 IL 566
           +L
Sbjct: 511 VL 512



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 1/301 (0%)

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           + Y  M   GV P + +   L+          +   LF EMR R    +   ++ L+   
Sbjct: 143 DTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            KE   ++A RL D+M  A I P+   Y   I   C  G+  +A R+  ++K  G     
Sbjct: 203 LKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TY  ++    K G  + A  +  EM + G     +  T L+  +    ++  A  ++  
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
             K G  P    YGVLI G    G  ++A +L   M    L P+    ++++ G   +  
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+ L  EM + GL P++ +Y++ I   CQ  K  EA  L ++M K G+KPS++ YN 
Sbjct: 383 WKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNS 441

Query: 566 L 566
           L
Sbjct: 442 L 442



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%)

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A+D    M  RG+ P   + T L+    R    + A  ++  M+  G+  D + +  L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
               +G  ++A +LF+ M   +++P+  VY + I   CK G+  RALR+L EM E G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              +Y + + VL + G+  EA  + ++M   G K  V +   L R 
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRG 306



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+I  +    +  +   ++  M+  G+   ++T+ +L+    K  +       +SE 
Sbjct: 648 VYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K  + D ++F  L  G C +GD++ A ++L ++  +   PNV IY  LI+G  ++  +
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL 767

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           + A  L  ++  +G+     TY +L+   F
Sbjct: 768 QEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 221/445 (49%), Gaps = 12/445 (2%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M   G  P   T+N+LL  +       D   L+    +     DV ++  L+ G C+ G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L++A ++ +   + GF P+VV Y +LI+G CK   ++ A+ + +++    LV    TY  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQL--NGVSPSLYTYNCLIHEYCNEGK-VSEGFKLFDEMR 307
           L+ GL KNG   +      +M +   G SP++ TY+ LI   C E + VSE  KLF  + 
Sbjct: 121 LVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +     V TYN LI GL KE RV EA  L   +   G+ P+ ITY   IDG C AG  +
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  +   +   G  P VV++N +I    K      A  L+  ME +G +P+ +++  LI
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC---MKGNMKEASKLFNSMWET 484
               R+   +KA   +  M K G  P V TY +L+ GLC    +G +KEA  LF++M E 
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+ V Y+ +I G  K G    A RLLG M  KG +PN+ +Y+S I  LC   K  EA
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             L   M++ G  P    Y  +  A
Sbjct: 416 LELFVAMVEKGCVPDTITYGTIISA 440



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 40/417 (9%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF--SENRCKVELDVY 176
            R+SD    Y  +M+ +G  P   T+N+LL    K    D+    F  +  R  V  DV 
Sbjct: 24  GRMSDAQALY-ERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVP-DVV 81

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML---- 232
           ++  LI G C+A  L++A  +L ++      P+VV Y SL++G CKNG ++ A+ML    
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 141

Query: 233 -------------------FRKIGE----LGLVATQH------TYTVLICGLFKNGLQKD 263
                               R + E     G V  Q       TY +LI GL K     +
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
            FE +  +  +G+ P   TY   I   C  G+V +   +  +M  +    +VV++N +I 
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCKE RV EAE LL  M+  G SPN I++N LI G C AG+  KA   F ++   G  P
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 384 SVVTYNVLIRAFSKA---GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           +VVTYN+L+    KA   G  K A  L   M E+G  P  VTY+ LID   ++  ++ A 
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            +   M+  G  P+VYTY  LI GLC    + EA +LF +M E    P+ + Y  +I
Sbjct: 382 RLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 167/339 (49%), Gaps = 14/339 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N V     Y S+++   K+   D+A      ++D G  P   T+++L+  +   C   
Sbjct: 108 SENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGL---CREL 161

Query: 159 KGW-----LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           +G      LF S  +   E +V ++ ILI G  +   +N+AFE+ + L + G  P+ + Y
Sbjct: 162 RGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 221

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T  IDG CK G +E A ++ + + E G V    ++  +I GL K     +       M+ 
Sbjct: 222 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---EMR 330
            G SP+  ++N LI   C  GK  +    F EM  R V   VVTYN L+ GLCK   E R
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA  L D M   G  P+V+TY+ LIDG   AG+ D A RL   +++ G  P+V TYN 
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 401

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           LI           A +L   M E+G  P  +TY  +I +
Sbjct: 402 LISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 208/399 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E  V +F ILI G C  GD+ +A E+++ +E+ G+  +V  Y  LI+G CK G    A 
Sbjct: 142 LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAV 201

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
              RK+ E         Y+ ++ GL K+GL  +      +M   G+ P+L TY CLI   
Sbjct: 202 GWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL 261

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           CN G+  E   L DEM    V  ++ + N L+  LCKE ++ +A+ ++  M + G  P+V
Sbjct: 262 CNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDV 321

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN LID +C   + D+A R+F  + S G  P +V Y  LI  + K  N   A  L+ E
Sbjct: 322 FTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDE 381

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G TP  VT+T LI  F +      A E++  M K G  P++ T  +++ GLC    
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA  LF++M ++ L+ N V+Y++++ G C  G    AL L   +  KGL  N+ +Y+ 
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I    + G   +AE LL+ M + G  P    YN+  + 
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 186/382 (48%), Gaps = 35/382 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++G+LI G C+ G  ++A   L ++EE  ++PNVV+Y++++DG CK+G +  A  L 
Sbjct: 180 DVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLC 239

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL------------- 280
            ++   G+     TYT LI GL   G  K+     ++M   GV P L             
Sbjct: 240 LEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKE 299

Query: 281 ----------------------YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                                 +TYN LI  YC + ++ E  ++F+ M  R    ++V Y
Sbjct: 300 GKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
            +LI G CK   + +A  LLD+M   G +P+V+T+  LI GFC  G    A  LF  +  
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            GQ P++ T  +++    K+     A  L   ME+  +  + V Y+I++D    +  +  
Sbjct: 420 YGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNT 479

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E++S +   G   +VY Y ++I+G   +G + +A  L ++M E    P+   YN+ + 
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539

Query: 499 GYCKEGNSYRALRLLGEMNEKG 520
           G   E    R+++ L  M +KG
Sbjct: 540 GLVAEREIARSIKYLTMMRDKG 561



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----GWLF 163
           +Y +++D   K  L  +AL    +M   G++P   T+  L+  +   C+F +    G L 
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL---CNFGRWKEAGSLL 274

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               +  V  D+ S  IL+   C+ G + +A  V+  +  +G  P+V  Y SLID  C  
Sbjct: 275 DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQ 334

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             ++ A  +F  +   G +     YT LI G  K           ++M   G +P + T+
Sbjct: 335 NQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTW 394

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI  +C  G+     +LF  M       N+ T   ++ GLCK   + EA  L   M+ 
Sbjct: 395 TTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEK 454

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + +  N++ Y+ ++DG C AG+ + A  LF+ L + G   +V  Y ++I  F+K G    
Sbjct: 455 SNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDK 514

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL+  MEE G  P   TY + +   V   ++ ++ +  ++M+  GFS D  T  ++I+
Sbjct: 515 AEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIIN 574

Query: 464 GL 465
            L
Sbjct: 575 YL 576



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 184/406 (45%), Gaps = 2/406 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           + Y  +I+   K   + +A+ +  +M +    P    +++++  + K     +      E
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K ++ ++ ++  LI+G C  G   +A  +L+++ +MG  P++     L+D  CK G 
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I +AK +   +  +G V    TY  LI          +    +E M   G  P +  Y  
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LIH +C    +++   L DEM       +VVT+ TLI G C+  R   A+ L   M   G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PN+ T   ++DG C +    +A  LF+ ++ +    ++V Y++++     AG    A 
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL 481

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L   +  +G+  +   YTI+I+ F +   ++KA ++ S M+++G  PD  TY V + GL
Sbjct: 482 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             +  +  + K + +M   K    D     MI  Y         LR
Sbjct: 542 VAEREIARSIK-YLTMMRDKGFSVDATTTEMIINYLSTNQGDNELR 586



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 39/245 (15%)

Query: 361 CDAGE---TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GI 416
           C +G+    D+A   F+ +      PSV+ + +L+    K  +   A  LV+EM    GI
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P      ++I+S      +   F +   M K G  P V T+ +LI+GLC+KG++  A +
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 477 LFNSM------------------------------WETKLE-----PNDVVYNMMIFGYC 501
           L + +                              W  K+E     PN VVY+ ++ G C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K+G    AL L  EM+ KG+ PN+ +Y+  I  LC  G+W EA  LL++M+K+G+ P + 
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 562 LYNIL 566
             NIL
Sbjct: 288 SLNIL 292


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++  + K      A+     M   GV     T+N L+  + +S    KG+L   + R
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  LI G    G +  A ++LN++   G SPN V + +LIDG    G+ +
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   GL  ++ +Y VL+ GL KN        FY +M+ NGV     TY  +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E   L +EM    +  ++VTY+ LI G CK  R + A+ ++ ++   G+S
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN I Y+ LI   C  G   +A R++  +   G +    T+NVL+ +  KAG    A + 
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R M   GI P+ V++  LI+ +  S +  KAF ++  M K G  P  +TYG L+ GLC 
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G+++EA K   S+       + V+YN ++   CK GN  +A+ L GEM ++ ++P+  +
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690

Query: 528 YSSTIGVLCQDGK 540
           Y+S I  LC+ GK
Sbjct: 691 YTSLISGLCRKGK 703



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 260/550 (47%), Gaps = 52/550 (9%)

Query: 28  AFSLFNWASRQ-GLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLI--LKIISGRITSSS 82
           A     W  +Q GL+  H  Q + I   +L+    +  +  A+ ++  L ++SG+   SS
Sbjct: 93  ALKFLKWVVKQPGLETDHIVQLVCITTHILVR---ARMYDPARHILKELSLMSGK---SS 146

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           F   +L+   T     +SNP     +Y+ +I  +L+  +   +L  F  M   G  P   
Sbjct: 147 FVFGALM---TTYRLCNSNP----SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 199

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N++L  V+KS                 ++ V+SF                   L ++ 
Sbjct: 200 TCNAILGSVVKSGE---------------DVSVWSF-------------------LKEML 225

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           +    P+V  +  LI+  C  G  E++  L +K+ + G   T  TY  ++    K G  K
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              E  + M+  GV   + TYN LIH+ C   ++++G+ L  +MR R +  N VTYNTLI
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G   E +V  A +LL++M   G+SPN +T+N LIDG    G   +A ++F  +++ G +
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           PS V+Y VL+    K     +A      M+  G+    +TYT +ID   ++  +++A  +
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + M K G  PD+ TY  LI+G C  G  K A ++   ++   L PN ++Y+ +I+  C+
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    A+R+   M  +G   +  +++  +  LC+ GK  EAE  +  M   G+ P+   
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585

Query: 563 YNILYRAKNN 572
           ++ L     N
Sbjct: 586 FDCLINGYGN 595



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 38/427 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G    G+  +A ++   +E  G +P+ V Y  L+DG CKN + + A+  + ++
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK- 295
              G+   + TYT +I GL KNG   +      +M  +G+ P + TY+ LI+ +C  G+ 
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494

Query: 296 ----------------------------------VSEGFKLFDEMRHREVACNVVTYNTL 321
                                             + E  ++++ M       +  T+N L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  LCK  +V EAE  +  M   GI PN ++++ LI+G+ ++GE  KAF +F+++   G 
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+  TY  L++   K G+ + A   ++ +         V Y  L+ +  +S ++ KA  
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK--LEPNDVVYNMMIFG 499
           ++  M +    PD YTY  LI GLC KG    A  LF    E +  + PN V+Y   + G
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDG 733

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K G     +    +M+  G  P+I + ++ I    + GK  +   LL +M      P+
Sbjct: 734 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 793

Query: 560 VSLYNIL 566
           ++ YNIL
Sbjct: 794 LTTYNIL 800



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 214/461 (46%), Gaps = 4/461 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
            ++ +I+ +  S    +A   F +M   G  P   T+ SLL  + K     +   F  S +
Sbjct: 586  FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +D   +  L+   C++G+L KA  +  ++ +    P+   YTSLI G C+ G   
Sbjct: 646  AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

Query: 228  RAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             A +LF K  E    ++  +  YT  + G+FK G  K G  F E+M   G +P + T N 
Sbjct: 706  IA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            +I  Y   GK+ +   L  EM ++    N+ TYN L+ G  K   V  +  L   + + G
Sbjct: 765  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            I P+ +T + L+ G C++   +   ++       G      T+N+LI      G    A 
Sbjct: 825  ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 884

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            DLV+ M   GI+  + T   ++    R+   +++  +   M K G SP+   Y  LI+GL
Sbjct: 885  DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 944

Query: 466  CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            C  G++K A  +   M   K+ P +V  + M+    K G +  A  LL  M +  LVP I
Sbjct: 945  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 1004

Query: 526  ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AS+++ + + C++G   EA  L   M   GLK  +  YN+L
Sbjct: 1005 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 256/629 (40%), Gaps = 113/629 (17%)

Query: 49  IILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
           +I   LL++M S   +        +I G I+  +F        L   +   +  +T S +
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA-----LKMFYMMEAKGLTPSEV 409

Query: 109 -YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
            Y  ++D   K+   D A  ++ +M  +GV     T+  ++  + K+   D+  +  +E 
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++  ++ D+ ++  LI G C+ G    A E++ ++  +G SPN +IY++LI  CC+ G +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  ++  +   G      T+ VL+  L K G   +  EF   M  +G+ P+  +++CL
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589

Query: 287 IHEYCNEGKVSEGFKLFDEM-------------------------RHRE----------V 311
           I+ Y N G+  + F +FDEM                         R  E           
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET----- 366
           A + V YNTL+  +CK   + +A  L  +M    I P+  TY  LI G C  G+T     
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709

Query: 367 ----------------------DKAFR---------LFNQLKSNGQSPSVVTYNVLIRAF 395
                                 D  F+            Q+ + G +P +VT N +I  +
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S+ G  +  +DL+ EM  +   P+  TY IL+  + +  D+  +F +Y  +  +G  PD 
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL--- 512
            T   L+ G+C    ++   K+  +     +E +   +NM+I   C  G    A  L   
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 889

Query: 513 --------------------------------LGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                                           L EM+++G+ P    Y   I  LC+ G 
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              A V+  +M+   + P     + + RA
Sbjct: 950 IKTAFVVKEEMIAHKICPPNVAESAMVRA 978



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 215/504 (42%), Gaps = 77/504 (15%)

Query: 97   PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
            P++ + V    +Y +++ A  KS    +A+  F +M+   + P S T+ SL+  + +   
Sbjct: 648  PAAVDTV----MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703

Query: 157  FDKGWLFF--SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                 LF   +E R  V  +   +   + G  +AG          Q++ +G +P++V   
Sbjct: 704  TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763

Query: 215  SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            ++IDG  + G IE+   L  ++G         TY +L+ G  K       F  Y  + LN
Sbjct: 764  AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823

Query: 275  GVSPS-----------------------------------LYTYNCLIHEYCNEGKVSEG 299
            G+ P                                     YT+N LI + C  G+++  
Sbjct: 824  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883

Query: 300  FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            F L   M    ++ +  T + ++  L +  R QE+  +L +M   GISP    Y  LI+G
Sbjct: 884  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
             C  G+   AF +  ++ ++   P  V  + ++RA +K G +  A+ L+R M +  + P+
Sbjct: 944  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003

Query: 420  EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              ++T L+    ++ ++ +A E+  +M   G   D+ +Y VLI GLC KG+M  A +L+ 
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063

Query: 480  SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQD 538
                                               EM   G + N  +Y + I G+L ++
Sbjct: 1064 -----------------------------------EMKGDGFLANATTYKALIRGLLARE 1088

Query: 539  GKWPEAEVLLNQMLKLGLKPSVSL 562
              +  A+++L  +L  G   S+SL
Sbjct: 1089 TAFSGADIILKDLLARGFITSMSL 1112


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 240/468 (51%), Gaps = 7/468 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           Y  +ID   K    D+    + +++ D  V P   T+N ++  + K   FD+    W   
Sbjct: 224 YNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERM 283

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           ++N  + E D++++  LI G CEAG+++ A  V  ++ E     + V + ++++G C+ G
Sbjct: 284 TKN--EREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAG 341

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ +  L+  +G+     T  +Y +LI GLF+NG  ++    +E +   G  P   TY 
Sbjct: 342 KIKESFELWMVMGKEN-CQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYG 400

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G++++  K+F E        +   Y++++ GLCKE R+ EA  +++QM   
Sbjct: 401 VLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKR 460

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G   +    N LI+GF  A + + A   F +++  G SP++V+YN LI+   KA     A
Sbjct: 461 GYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEA 520

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
              V+EM E+   P  +T ++L+D   +   +E A  ++      GF PD+  Y +L+HG
Sbjct: 521 YSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHG 580

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    +++A +L++ M  +   PN V  N ++ G  K  +  +A  +   + + GL P+
Sbjct: 581 LCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPD 640

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           I SY+ TI  LC   +  +A   LN  L  G+ P+   +NIL RA  N
Sbjct: 641 IISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 273/547 (49%), Gaps = 39/547 (7%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           A+  PL A SLF  ASR    H+      ILR L +     SH +    I+K        
Sbjct: 22  AEKNPLSALSLFESASRNK-SHSAHVFHHILRRLAADSRLVSHVSRIVDIVK-------- 72

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRP 139
                        Q  P       K  +  ++I A+ K+++S++AL  F  M D  G +P
Sbjct: 73  ------------AQKCP------CKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKP 114

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLF--FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
              ++N+LL   ++   +D+   F  + E+   V  ++ ++ ILIK  C+   + KA  +
Sbjct: 115 GVRSYNTLLNAFVELNEWDRAESFSRYFESM-DVSPNLQTYNILIKISCKKQQIEKAISL 173

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L+ +      P+V  Y +LI+G  K GD+  A  +F ++   G+VA    Y +LI G FK
Sbjct: 174 LDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFK 233

Query: 258 NGLQKDGFEFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +G    G E +E++  +  V P++ TYN +I+  C  G+  E  ++++ M   E   ++ 
Sbjct: 234 HGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMF 293

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY++LI GLC+   +  A R+  ++  + +  + +T+N +++GFC AG+  ++F L+  +
Sbjct: 294 TYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM 353

Query: 377 -KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
            K N Q  +VV+YN+LI+   + G  + A  +   + ++G  P   TY +LI    ++  
Sbjct: 354 GKENCQ--TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGR 411

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET--KLEPNDVVY 493
           + KA +++   +      D Y Y  ++ GLC +G M EA  + N M +   KL+P+  V 
Sbjct: 412 LNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPH--VC 469

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G+ +      A+    EM  KG  P I SY++ I  LC+  ++ EA   + +ML+
Sbjct: 470 NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLE 529

Query: 554 LGLKPSV 560
              KP +
Sbjct: 530 KEWKPDM 536



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 2/256 (0%)

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V +YNTL+    +      AE      +   +SPN+ TYN LI   C   + +KA  L +
Sbjct: 116 VRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLD 175

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + S    P V +Y  LI    K G+   A  +  EM  RG+      Y +LID F +  
Sbjct: 176 WMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHG 235

Query: 435 DMEKAFEMYS-LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D +K  E++  L++     P+V TY ++I+GLC  G   E+ +++  M + + E +   Y
Sbjct: 236 DYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTY 295

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + +I G C+ GN   A+R+  E+ E  LV +  ++++ +   C+ GK  E+  L   M K
Sbjct: 296 SSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGK 355

Query: 554 LGLKPSVSLYNILYRA 569
              +  VS YNIL + 
Sbjct: 356 ENCQTVVS-YNILIKG 370


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 271/557 (48%), Gaps = 20/557 (3%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           PL A + F W  R    + P S++    LLL  +   +  AA+ +   +I     +S   
Sbjct: 66  PLTALNFFRWIRRH--HNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKS--CTSPHD 121

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRL--------YESIIDAHLKSRLSDQALFYFHQML-DS 135
              LL  L ++  +++    + +L        Y  ++    +  + D+ +  + +ML D+
Sbjct: 122 ATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDN 181

Query: 136 G--VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLN 192
           G  V P   T N++L    K  +     LFF    RC+   D++++  L+ G C   D+ 
Sbjct: 182 GNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVE 241

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  V   +       N V YT+LI G C+ G +  A   + ++ E G   T  TYTVL+
Sbjct: 242 RACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLV 297

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           C L ++G + +    + +M+  G  P++YTY  LI   C EG++ E  K+ +EM  + VA
Sbjct: 298 CALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVA 357

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VV +N LI   CK   +++A  +L  M+   + PNV TYN+LI GFC     D+A  L
Sbjct: 358 PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            N++  +  SP VVTYN LI    + G    AS L R M   G +P + T+   +    R
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + +A ++   +++     + + Y  LI G C  G ++ A+ LF  M   +  PN + 
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI G  KEG    A+ L+ +M +  + P + +Y+  +  + ++  +  A  +LN+++
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 553 KLGLKPSVSLYNILYRA 569
             G +P+V  Y    +A
Sbjct: 598 SSGYQPNVVTYTAFIKA 614



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 228/489 (46%), Gaps = 32/489 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--GWLFFSE 166
           Y  +ID   K    D+AL   ++M++ GV P    FN+L+    K    +   G L   E
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++ KV  +V ++  LI G C    +++A  +LN++ E   SP+VV Y +LI G C+ G +
Sbjct: 388 SK-KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  LFR +   G    Q T+   +  L + G   +  +  E ++   V  + + Y  L
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  GK+     LF  M   E   N +T+N +I GL KE +VQ+A  L++ M    +
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P + TYN L++      + D+A  + N+L S+G  P+VVTY   I+A+   G  + A +
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +V +++  G+      Y +LI+++     ++ AF +   M  +G  P   TY +L+  L 
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 467 MKGNMKEASK-----------------------------LFNSMWETKLEPNDVVYNMMI 497
           ++ + KE S                              LF  M E    PN   Y+ +I
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G CK G    A  L   M E G+ P+   ++S +   C+ G + EA  LL+ M++    
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHL 806

Query: 558 PSVSLYNIL 566
             +  Y +L
Sbjct: 807 AHLESYKLL 815



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 2/408 (0%)

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           W    E+ C   +  Y+  +L+   CE+G   +A  +  ++ E G  PNV  YT LID  
Sbjct: 278 WARMREDGCFPTVRTYT--VLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYL 335

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G ++ A  +  ++ E G+  +   +  LI    K G+ +D       M+   V P++
Sbjct: 336 CKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNV 395

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TYN LI  +C    +     L ++M   +++ +VVTYNTLI GLC+   V  A RL   
Sbjct: 396 RTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRL 455

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G SP+  T+N  +   C  G   +A ++   LK      +   Y  LI  + KAG 
Sbjct: 456 MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK 515

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A+ L + M      P+ +T+ ++ID   +   ++ A  +   M K    P ++TY +
Sbjct: 516 IEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNI 575

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+  +  + +   A+++ N +  +  +PN V Y   I  YC +G    A  ++ ++  +G
Sbjct: 576 LVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEG 635

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           ++ +   Y+  I      G    A  +L +M   G +PS   Y+IL +
Sbjct: 636 VLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK 683



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 178/392 (45%), Gaps = 11/392 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID + K+   + A   F +ML     P S TFN ++  + K        L   +  
Sbjct: 503 YTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA 562

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V+  ++++ IL++   +  D ++A E+LN+L   G+ PNVV YT+ I   C  G +E
Sbjct: 563 KFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLE 622

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +  KI   G++     Y +LI      GL    F    +M   G  PS  TY+ L+
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI--CGLCKEMRVQEAERLLDQMKMAG 345
                E    EG           V  +V   N  +    +  ++       L ++M   G
Sbjct: 683 KHLVIEKHKKEG--------SNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECG 734

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PN+ TY+KLI+G C  G  + AF L++ ++  G SPS + +N L+ +  K G    A 
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+  M E        +Y +LI       + EKA  ++  + + G++ D   + VLI GL
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL 854

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
              G + + S+L N M +     +   Y+M++
Sbjct: 855 AKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 200/488 (40%), Gaps = 65/488 (13%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFS 165
           R Y  +I    + +  D+A+   ++M++S + P   T+N+L+  + +    D    LF  
Sbjct: 396 RTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRL 455

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R     D ++F   +   C  G + +A ++L  L+E     N   YT+LIDG CK G 
Sbjct: 456 MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK 515

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           IE A  LF+++     +    T+ V+I GL K G  +D     E M    V P+L+TYN 
Sbjct: 516 IEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNI 575

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL-------- 337
           L+ E   E       ++ + +       NVVTY   I   C + R++EAE +        
Sbjct: 576 LVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEG 635

Query: 338 ---------------------------LDQMKMAGISPNVITYNKLIDGFC--------- 361
                                      L +M   G  P+ +TY+ L+             
Sbjct: 636 VLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGS 695

Query: 362 -----DAGETDKAFR---------------LFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                D   T+ +                 LF ++   G  P++ TY+ LI    K G  
Sbjct: 696 NPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRL 755

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +A  L   M E GI+PSE+ +  L+ S  +     +A  +   M +      + +Y +L
Sbjct: 756 NVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLL 815

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I GL  + N ++A  +F S+       ++V + ++I G  K G   +   LL  M + G 
Sbjct: 816 ICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGC 875

Query: 522 VPNIASYS 529
             +  +YS
Sbjct: 876 RLHPETYS 883



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 141/325 (43%), Gaps = 40/325 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++  LK    D+A    ++++ SG +P   T+ +   F+   CS  +G L  +E  
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTA---FIKAYCS--QGRLEEAEEM 627

Query: 169 C------KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT-------- 214
                   V LD + + +LI      G L+ AF VL ++   G  P+ + Y+        
Sbjct: 628 VIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVI 687

Query: 215 ---------------SLIDGCCKNGDIER------AKMLFRKIGELGLVATQHTYTVLIC 253
                          SL +    N DI          +LF K+ E G V   +TY+ LI 
Sbjct: 688 EKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLIN 747

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL K G     F  Y  M+  G+SPS   +N L+   C  G   E   L D M       
Sbjct: 748 GLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLA 807

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++ +Y  LICGL ++M  ++AE +   +   G + + + +  LIDG    G  D+   L 
Sbjct: 808 HLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELL 867

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKA 398
           N ++ NG      TY++L++  ++A
Sbjct: 868 NLMEKNGCRLHPETYSMLMQELNRA 892


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 239/498 (47%), Gaps = 35/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+   D A   F +M   G+ P   T+  L+  + K    +     F + R
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +++ VY +  LI G C+ G L++A  +L+ + + G +P    Y+ LI G C+NGD+ 
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 483

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L R++ E G+    +T+T LI G  K+    +    ++KM  + V P+  T+N +I
Sbjct: 484 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 543

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G + + F+L+D+M    +  +  TY +LI GLC    V +A   +  ++ +   
Sbjct: 544 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 603

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N  +   L+ GF   G   + + L++++   G    +V++ +++ A  K  + + +  L
Sbjct: 604 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 663

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM+E+G+ P ++ YT +ID+  + ++M +A   +  M   G+SP+  T+ VLI+ LC 
Sbjct: 664 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 723

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVY---------------------------------- 493
            G +  A  L   M    + PN   Y                                  
Sbjct: 724 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF 783

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G CK G    A+ L+ ++ E G  P+  SYS+ I  LC+ G   +A  L N+ML 
Sbjct: 784 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 843

Query: 554 LGLKPSVSLYNILYRAKN 571
            GLKP V  YNI  R  N
Sbjct: 844 KGLKPDVVAYNIFIRWCN 861



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 225/443 (50%), Gaps = 3/443 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILIKGCC 186
           F +ML SGV      + + +    +S + D  +G +   E+   V+     + +L+ G C
Sbjct: 209 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE-GVKASAVPYNVLMYGLC 267

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +   + +A EV N +  +G + + V Y +L+ G C+  ++E A  +   +  LG V ++ 
Sbjct: 268 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 327

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
             + +I  L K  L ++ F    K+   G+ P+++ YN LI + C   +  +  +LF EM
Sbjct: 328 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 387

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R +  N VTY  LI  LCK   +++A  L D+M+  GI   V  YN LI+G+C  G  
Sbjct: 388 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 447

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L + +   G +P+  +Y+ LI    + G+     +L REM ERGI  +  T+T L
Sbjct: 448 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 507

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ F +   M++A  ++  M  S   P+  T+ V+I G C+ GN+++A +L++ M E  L
Sbjct: 508 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P++  Y  +I G C      +A   + ++     V N  S ++ +    ++G++ E   
Sbjct: 568 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 627

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L ++M   G+K  +  + I+  A
Sbjct: 628 LWDEMAVRGVKLDLVSFTIIVYA 650



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 196/409 (47%), Gaps = 35/409 (8%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +AF +  +L ++G  PNV  Y +LID  CKN   + A  LF+++   GL   + TY +
Sbjct: 342 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 401

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK-----------VSEG 299
           LI  L K G+ +D    ++KM+  G+  ++Y YN LI+ YC +G            V EG
Sbjct: 402 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 461

Query: 300 F------------------------KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                                    +L  EM  R +A N  T+  LI G CK+ ++ EA 
Sbjct: 462 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 521

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL D+M  + + PN +T+N +I+G+C  G   KAF+L++Q+   G  P   TY  LI   
Sbjct: 522 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                   A++ V ++E      +  + T L+  F R     + + ++  M   G   D+
Sbjct: 582 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDL 641

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            ++ ++++    + + +++  LF  M E  ++P+D+ Y  MI    KE N  +AL    +
Sbjct: 642 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 701

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           M   G  PN  +++  I  LC+ G    AE+L  +ML   + P+   YN
Sbjct: 702 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 750



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 219/465 (47%), Gaps = 5/465 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A+ +SR  D A     +M   GV+  +  +N L+  + K+    +      +N
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA--VEVKN 280

Query: 168 ---RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 V  D  ++  L+ G C   +L  A  + + +  +GF P+    + +ID   K  
Sbjct: 281 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 340

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L  K+G+LG+V     Y  LI  L KN    D    +++M   G+ P+  TY 
Sbjct: 341 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 400

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G + +   LFD+MR + +   V  YN+LI G CK+  +  A  LL  M   
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P   +Y+ LI G C  G+      L  ++   G + +  T+  LI  F K      A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + L  +M +  + P+EVT+ ++I+ +    ++ KAF++Y  M + G  PD YTY  LI G
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+   + +A++    +  +    N+     +++G+ +EG       L  EM  +G+  +
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + S++  +    +     ++ VL  +M + G+KP    Y  +  A
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 685



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 182/426 (42%), Gaps = 70/426 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+   K +  D+A   F +M+DS V P   TFN                       
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN----------------------- 540

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      ++I+G C  G++ KAF++ +Q+ EMG  P+   Y SLI G C    + +
Sbjct: 541 -----------VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------------- 273
           A      +     V    + T L+ G F+ G   + +  +++M +               
Sbjct: 590 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 649

Query: 274 --------------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                GV P    Y C+I     E  + +    +D+M     + 
Sbjct: 650 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 709

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VT+  LI  LCK   +  AE L  +M    + PN  TYN  +D F   G+ +KA  L 
Sbjct: 710 NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 769

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G   S+V++N+LI+   KAG  + A DL+ ++ E G +P  ++Y+ +I    + 
Sbjct: 770 SAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 828

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+ KAFE+++ M   G  PDV  Y + I    + G   +A  ++ +M  + ++PN   Y
Sbjct: 829 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 888

Query: 494 NMMIFG 499
             ++ G
Sbjct: 889 RALLSG 894



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 169/346 (48%), Gaps = 4/346 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGIL 181
           +A   + QM++ G++P + T+ SL+  +  +    K   F +  EN   V L+ +S   L
Sbjct: 554 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-LNNFSLTAL 612

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G    G   + + + +++   G   ++V +T ++    K  D E++ +LFR++ E G+
Sbjct: 613 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 YT +I  L K          +++M ++G SP+  T+  LI+  C  G +     
Sbjct: 673 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 732

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM    V  N  TYN  +     E  +++A+ L   M + G   +++++N LI G C
Sbjct: 733 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLC 791

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            AG+  +A  L +++  +G SP  ++Y+ +I    K G+   A +L  EM  +G+ P  V
Sbjct: 792 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVV 851

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            Y I I       + +KA  +Y+ M +SG  P+  TY  L+ G+ +
Sbjct: 852 AYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++  + K      A+     M   GV     T+N L+  + +S    KG+L   + R
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  LI G    G +  A ++LN++   G SPN V + +LIDG    G+ +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   GL  ++ +Y VL+ GL KN        FY +M+ NGV     TY  +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E   L +EM    +  ++VTY+ LI G CK  R + A+ ++ ++   G+S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN I Y+ LI   C  G   +A R++  +   G +    T+NVL+ +  KAG    A + 
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R M   GI P+ V++  LI+ +  S +  KAF ++  M K G  P  +TYG L+ GLC 
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G+++EA K   S+       + V+YN ++   CK GN  +A+ L GEM ++ ++P+  +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 528 YSSTIGVLCQDGK 540
           Y+S I  LC+ GK
Sbjct: 651 YTSLISGLCRKGK 663



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 260/550 (47%), Gaps = 52/550 (9%)

Query: 28  AFSLFNWASRQ-GLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLI--LKIISGRITSSS 82
           A     W  +Q GL+  H  Q + I   +L+    +  +  A+ ++  L ++SG+   SS
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVR---ARMYDPARHILKELSLMSGK---SS 106

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           F   +L+   T     +SNP     +Y+ +I  +L+  +   +L  F  M   G  P   
Sbjct: 107 FVFGALM---TTYRLCNSNP----SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N++L  V+KS                 ++ V+SF                   L ++ 
Sbjct: 160 TCNAILGSVVKSGE---------------DVSVWSF-------------------LKEML 185

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           +    P+V  +  LI+  C  G  E++  L +K+ + G   T  TY  ++    K G  K
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              E  + M+  GV   + TYN LIH+ C   ++++G+ L  +MR R +  N VTYNTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G   E +V  A +LL++M   G+SPN +T+N LIDG    G   +A ++F  +++ G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           PS V+Y VL+    K     +A      M+  G+    +TYT +ID   ++  +++A  +
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + M K G  PD+ TY  LI+G C  G  K A ++   ++   L PN ++Y+ +I+  C+
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    A+R+   M  +G   +  +++  +  LC+ GK  EAE  +  M   G+ P+   
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 563 YNILYRAKNN 572
           ++ L     N
Sbjct: 546 FDCLINGYGN 555



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 38/427 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G    G+  +A ++   +E  G +P+ V Y  L+DG CKN + + A+  + ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK- 295
              G+   + TYT +I GL KNG   +      +M  +G+ P + TY+ LI+ +C  G+ 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 296 ----------------------------------VSEGFKLFDEMRHREVACNVVTYNTL 321
                                             + E  ++++ M       +  T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  LCK  +V EAE  +  M   GI PN ++++ LI+G+ ++GE  KAF +F+++   G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+  TY  L++   K G+ + A   ++ +         V Y  L+ +  +S ++ KA  
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK--LEPNDVVYNMMIFG 499
           ++  M +    PD YTY  LI GLC KG    A  LF    E +  + PN V+Y   + G
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDG 693

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K G     +    +M+  G  P+I + ++ I    + GK  +   LL +M      P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 560 VSLYNIL 566
           ++ YNIL
Sbjct: 754 LTTYNIL 760



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 214/461 (46%), Gaps = 4/461 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
            ++ +I+ +  S    +A   F +M   G  P   T+ SLL  + K     +   F  S +
Sbjct: 546  FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +D   +  L+   C++G+L KA  +  ++ +    P+   YTSLI G C+ G   
Sbjct: 606  AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 228  RAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             A +LF K  E    ++  +  YT  + G+FK G  K G  F E+M   G +P + T N 
Sbjct: 666  IA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            +I  Y   GK+ +   L  EM ++    N+ TYN L+ G  K   V  +  L   + + G
Sbjct: 725  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            I P+ +T + L+ G C++   +   ++       G      T+N+LI      G    A 
Sbjct: 785  ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            DLV+ M   GI+  + T   ++    R+   +++  +   M K G SP+   Y  LI+GL
Sbjct: 845  DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904

Query: 466  CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            C  G++K A  +   M   K+ P +V  + M+    K G +  A  LL  M +  LVP I
Sbjct: 905  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964

Query: 526  ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AS+++ + + C++G   EA  L   M   GLK  +  YN+L
Sbjct: 965  ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 256/629 (40%), Gaps = 113/629 (17%)

Query: 49  IILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
           +I   LL++M S   +        +I G I+  +F        L   +   +  +T S +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA-----LKMFYMMEAKGLTPSEV 369

Query: 109 -YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
            Y  ++D   K+   D A  ++ +M  +GV     T+  ++  + K+   D+  +  +E 
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++  ++ D+ ++  LI G C+ G    A E++ ++  +G SPN +IY++LI  CC+ G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  ++  +   G      T+ VL+  L K G   +  EF   M  +G+ P+  +++CL
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549

Query: 287 IHEYCNEGKVSEGFKLFDEM-------------------------RHRE----------V 311
           I+ Y N G+  + F +FDEM                         R  E           
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET----- 366
           A + V YNTL+  +CK   + +A  L  +M    I P+  TY  LI G C  G+T     
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669

Query: 367 ----------------------DKAFR---------LFNQLKSNGQSPSVVTYNVLIRAF 395
                                 D  F+            Q+ + G +P +VT N +I  +
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S+ G  +  +DL+ EM  +   P+  TY IL+  + +  D+  +F +Y  +  +G  PD 
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL--- 512
            T   L+ G+C    ++   K+  +     +E +   +NM+I   C  G    A  L   
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849

Query: 513 --------------------------------LGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                                           L EM+++G+ P    Y   I  LC+ G 
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              A V+  +M+   + P     + + RA
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRA 938



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 215/504 (42%), Gaps = 77/504 (15%)

Query: 97   PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
            P++ + V    +Y +++ A  KS    +A+  F +M+   + P S T+ SL+  + +   
Sbjct: 608  PAAVDTV----MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 157  FDKGWLFF--SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                 LF   +E R  V  +   +   + G  +AG          Q++ +G +P++V   
Sbjct: 664  TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 215  SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            ++IDG  + G IE+   L  ++G         TY +L+ G  K       F  Y  + LN
Sbjct: 724  AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 275  GVSPS-----------------------------------LYTYNCLIHEYCNEGKVSEG 299
            G+ P                                     YT+N LI + C  G+++  
Sbjct: 784  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843

Query: 300  FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            F L   M    ++ +  T + ++  L +  R QE+  +L +M   GISP    Y  LI+G
Sbjct: 844  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
             C  G+   AF +  ++ ++   P  V  + ++RA +K G +  A+ L+R M +  + P+
Sbjct: 904  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963

Query: 420  EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              ++T L+    ++ ++ +A E+  +M   G   D+ +Y VLI GLC KG+M  A +L+ 
Sbjct: 964  IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023

Query: 480  SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQD 538
                                               EM   G + N  +Y + I G+L ++
Sbjct: 1024 -----------------------------------EMKGDGFLANATTYKALIRGLLARE 1048

Query: 539  GKWPEAEVLLNQMLKLGLKPSVSL 562
              +  A+++L  +L  G   S+SL
Sbjct: 1049 TAFSGADIILKDLLARGFITSMSL 1072


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 218/448 (48%), Gaps = 8/448 (1%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           SL C + Q     S P+     +  ++    K    D  ++ +H+M + G+     +F +
Sbjct: 65  SLFCEMLQ-----SRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF-T 118

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +LI     CS     L       K+     + + G L+ G C+     +A  +++ ++  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF PNVVIY ++I+G CKN D+  A  +F  + + G+ A   TY  LI GL  +G   D 
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                 M    + P++  +  LI  +  EG + E   L+ EM  R V  NV TYN+LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C    + +A+ + D M   G  P+V+TYN LI GFC +   +   +LF ++   G    
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
             TYN LI  + +AG   +A  +   M + G++P  VTY IL+D    +  +EKA  M  
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            +QKS    D+ TY ++I GLC    +KEA  LF S+    ++P+ + Y  MI G C++G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTI 532
               A +L   M E G +P+   Y  T+
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETL 506



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 217/443 (48%), Gaps = 1/443 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGIL 181
           D A   F +ML S   P    F  +L  + K   FD   +L+       +  D+YSF IL
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    L+ A  +L ++ ++GF P++V   SL++G C+    + A  L   +   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V     Y  +I GL KN    +  E +  M+  G+     TYN LI    N G+ ++  +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  +M  R++  NV+ +  LI    KE  + EA  L  +M    + PNV TYN LI+GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G    A  +F+ + S G  P VVTYN LI  F K+   +    L  EM  +G+     
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  LI  + ++  +  A ++++ M   G SPD+ TY +L+  LC  G +++A  +   +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +++++ + + YN++I G C+      A  L   +  KG+ P+  +Y + I  LC+ G  
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480

Query: 542 PEAEVLLNQMLKLGLKPSVSLYN 564
            EA+ L  +M + G  PS  +Y+
Sbjct: 481 READKLCRRMKEDGFMPSERIYD 503



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 164/300 (54%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            Y KM+  G+S  LY++  LIH +C   ++S    L  +M       ++VT  +L+ G C
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  R QEA  L+D M   G  PNV+ YN +I+G C   + + A  +F  ++  G     V
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN LI   S +G    A+ L+R+M +R I P+ + +T LID+FV+  ++ +A  +Y  M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +    P+V+TY  LI+G C+ G + +A  +F+ M      P+ V YN +I G+CK    
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++L  EM  +GLV +  +Y++ I   CQ GK   A+ + N+M+  G+ P +  YNIL
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 176/376 (46%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            + AF +  ++ +    P++V +T ++    K    +    L+ K+  LG+    +++T+
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI    +            KM   G  PS+ T   L++ +C   +  E   L D M    
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NVV YNT+I GLCK   +  A  +   M+  GI  + +TYN LI G  ++G    A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           RL   +      P+V+ +  LI  F K GN   A +L +EM  R + P+  TY  LI+ F
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
                +  A  M+ LM   G  PDV TY  LI G C    +++  KLF  M    L  + 
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN +I GYC+ G    A ++   M + G+ P+I +Y+  +  LC +GK  +A V++  
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 551 MLKLGLKPSVSLYNIL 566
           + K  +   +  YNI+
Sbjct: 420 LQKSEMDVDIITYNII 435



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 130/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  + F LF EM       ++V +  ++  + K  +      L  +M+  GIS ++ ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  FC       A  L  ++   G  PS+VT   L+  F +    + A  LV  M+  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y  +I+   ++ D+  A E++  M+K G   D  TY  LI GL   G   +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           ++L   M + K++PN + +  +I  + KEGN   A  L  EM  + +VPN+ +Y+S I  
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            C  G   +A+ + + M+  G  P V  YN L
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 40/342 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---------- 157
           +Y ++I+   K+R  + AL  F+ M   G+R  + T+N+L+  +  S  +          
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245

Query: 158 -----DKGWLFFSE---------------------NRCKVELDVYSFGILIKGCCEAGDL 191
                D   +FF+                       R  V  +V+++  LI G C  G L
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             A  + + +   G  P+VV Y +LI G CK+  +E    LF ++   GLV    TY  L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  + G      + + +M   GVSP + TYN L+   CN GK+ +   + ++++  E+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +++TYN +I GLC+  +++EA  L   +   G+ P+ I Y  +I G C  G   +A +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           L  ++K +G  PS   Y+  +R       + ++++L++   E
Sbjct: 486 LCRRMKEDGFMPSERIYDETLRDHY----TSLSAELIKAAHE 523



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 120/238 (50%)

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           ++  +A  L  +M  +   P+++ + +++       + D    L++++++ G S  + ++
Sbjct: 58  IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +LI  F +     +A  L+ +M + G  PS VT   L++ F + +  ++A  +   M  
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GF P+V  Y  +I+GLC   ++  A ++F  M +  +  + V YN +I G    G    
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A RLL +M ++ + PN+  +++ I    ++G   EA  L  +M++  + P+V  YN L
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++  + K      A+     M   GV     T+N L+  + +S    KG+L   + R
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  LI G    G +  A ++LN++   G SPN V + +LIDG    G+ +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   GL  ++ +Y VL+ GL KN        FY +M+ NGV     TY  +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E   L +EM    +  ++VTY+ LI G CK  R + A+ ++ ++   G+S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN I Y+ LI   C  G   +A R++  +   G +    T+NVL+ +  KAG    A + 
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R M   GI P+ V++  LI+ +  S +  KAF ++  M K G  P  +TYG L+ GLC 
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G+++EA K   S+       + V+YN ++   CK GN  +A+ L GEM ++ ++P+  +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 528 YSSTIGVLCQDGK 540
           Y+S I  LC+ GK
Sbjct: 651 YTSLISGLCRKGK 663



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 260/550 (47%), Gaps = 52/550 (9%)

Query: 28  AFSLFNWASRQ-GLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLI--LKIISGRITSSS 82
           A     W  +Q GL+  H  Q + I   +L+    +  +  A+ ++  L ++SG+   SS
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVR---ARMYDPARHILKELSLMSGK---SS 106

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           F   +L+   T     +SNP     +Y+ +I  +L+  +   +L  F  M   G  P   
Sbjct: 107 FVFGALM---TTYRLCNSNP----SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N++L  V+KS                 ++ V+SF                   L ++ 
Sbjct: 160 TCNAILGSVVKSGE---------------DVSVWSF-------------------LKEML 185

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           +    P+V  +  LI+  C  G  E++  L +K+ + G   T  TY  ++    K G  K
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              E  + M+  GV   + TYN LIH+ C   ++++G+ L  +MR R +  N VTYNTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G   E +V  A +LL++M   G+SPN +T+N LIDG    G   +A ++F  +++ G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           PS V+Y VL+    K     +A      M+  G+    +TYT +ID   ++  +++A  +
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + M K G  PD+ TY  LI+G C  G  K A ++   ++   L PN ++Y+ +I+  C+
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G    A+R+   M  +G   +  +++  +  LC+ GK  EAE  +  M   G+ P+   
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 563 YNILYRAKNN 572
           ++ L     N
Sbjct: 546 FDCLINGYGN 555



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 38/427 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G    G+  +A ++   +E  G +P+ V Y  L+DG CKN + + A+  + ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK- 295
              G+   + TYT +I GL KNG   +      +M  +G+ P + TY+ LI+ +C  G+ 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 296 ----------------------------------VSEGFKLFDEMRHREVACNVVTYNTL 321
                                             + E  ++++ M       +  T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  LCK  +V EAE  +  M   GI PN ++++ LI+G+ ++GE  KAF +F+++   G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+  TY  L++   K G+ + A   ++ +         V Y  L+ +  +S ++ KA  
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK--LEPNDVVYNMMIFG 499
           ++  M +    PD YTY  LI GLC KG    A  LF    E +  + PN V+Y   + G
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDG 693

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K G     +    +M+  G  P+I + ++ I    + GK  +   LL +M      P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 560 VSLYNIL 566
           ++ YNIL
Sbjct: 754 LTTYNIL 760



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 214/461 (46%), Gaps = 4/461 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
            ++ +I+ +  S    +A   F +M   G  P   T+ SLL  + K     +   F  S +
Sbjct: 546  FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +D   +  L+   C++G+L KA  +  ++ +    P+   YTSLI G C+ G   
Sbjct: 606  AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 228  RAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             A +LF K  E    ++  +  YT  + G+FK G  K G  F E+M   G +P + T N 
Sbjct: 666  IA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            +I  Y   GK+ +   L  EM ++    N+ TYN L+ G  K   V  +  L   + + G
Sbjct: 725  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            I P+ +T + L+ G C++   +   ++       G      T+N+LI      G    A 
Sbjct: 785  ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            DLV+ M   GI+  + T   ++    R+   +++  +   M K G SP+   Y  LI+GL
Sbjct: 845  DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904

Query: 466  CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            C  G++K A  +   M   K+ P +V  + M+    K G +  A  LL  M +  LVP I
Sbjct: 905  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964

Query: 526  ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AS+++ + + C++G   EA  L   M   GLK  +  YN+L
Sbjct: 965  ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 256/629 (40%), Gaps = 113/629 (17%)

Query: 49  IILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
           +I   LL++M S   +        +I G I+  +F        L   +   +  +T S +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA-----LKMFYMMEAKGLTPSEV 369

Query: 109 -YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
            Y  ++D   K+   D A  ++ +M  +GV     T+  ++  + K+   D+  +  +E 
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++  ++ D+ ++  LI G C+ G    A E++ ++  +G SPN +IY++LI  CC+ G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  ++  +   G      T+ VL+  L K G   +  EF   M  +G+ P+  +++CL
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549

Query: 287 IHEYCNEGKVSEGFKLFDEM-------------------------RHRE----------V 311
           I+ Y N G+  + F +FDEM                         R  E           
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET----- 366
           A + V YNTL+  +CK   + +A  L  +M    I P+  TY  LI G C  G+T     
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669

Query: 367 ----------------------DKAFR---------LFNQLKSNGQSPSVVTYNVLIRAF 395
                                 D  F+            Q+ + G +P +VT N +I  +
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S+ G  +  +DL+ EM  +   P+  TY IL+  + +  D+  +F +Y  +  +G  PD 
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL--- 512
            T   L+ G+C    ++   K+  +     +E +   +NM+I   C  G    A  L   
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849

Query: 513 --------------------------------LGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                                           L EM+++G+ P    Y   I  LC+ G 
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              A V+  +M+   + P     + + RA
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRA 938



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 215/504 (42%), Gaps = 77/504 (15%)

Query: 97   PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
            P++ + V    +Y +++ A  KS    +A+  F +M+   + P S T+ SL+  + +   
Sbjct: 608  PAAVDTV----MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663

Query: 157  FDKGWLFF--SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                 LF   +E R  V  +   +   + G  +AG          Q++ +G +P++V   
Sbjct: 664  TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 215  SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            ++IDG  + G IE+   L  ++G         TY +L+ G  K       F  Y  + LN
Sbjct: 724  AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 275  GVSPS-----------------------------------LYTYNCLIHEYCNEGKVSEG 299
            G+ P                                     YT+N LI + C  G+++  
Sbjct: 784  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843

Query: 300  FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            F L   M    ++ +  T + ++  L +  R QE+  +L +M   GISP    Y  LI+G
Sbjct: 844  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
             C  G+   AF +  ++ ++   P  V  + ++RA +K G +  A+ L+R M +  + P+
Sbjct: 904  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963

Query: 420  EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              ++T L+    ++ ++ +A E+  +M   G   D+ +Y VLI GLC KG+M  A +L+ 
Sbjct: 964  IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023

Query: 480  SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQD 538
                                               EM   G + N  +Y + I G+L ++
Sbjct: 1024 -----------------------------------EMKGDGFLANATTYKALIRGLLARE 1048

Query: 539  GKWPEAEVLLNQMLKLGLKPSVSL 562
              +  A+++L  +L  G   S+SL
Sbjct: 1049 TAFSGADIILKDLLARGFITSMSL 1072


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 219/445 (49%), Gaps = 11/445 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSFGILIKG 184
           QM   G+R    T N L+     +C    G + FS +      +   + D  +   L+KG
Sbjct: 35  QMEVKGIRANFVTLNILI-----NCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKG 89

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C  G++ K+    +++   GF  + V Y +L++G CK G+   A  L R I +      
Sbjct: 90  LCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPN 149

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              Y  +I GL K+ L  + ++ Y +M   G+ P   TY  LI+ +C  G++   F L D
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLD 209

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM  + +   V  YN LI  LCKE  V+EA+ LL  M   GI P V+TY+ L+DG+C  G
Sbjct: 210 EMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVG 269

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           E   A ++F+ +   G +P+V +YN++I    K      A +L+REM  + + P  VTY 
Sbjct: 270 EVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 329

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID   +S  +  A  + + M   G   DV TY  L+  LC   N+ +A+ LF  M E 
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            ++P    Y  +I G CK G    A  L   +  KG   ++ +Y+  I  LC++G + EA
Sbjct: 390 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             + ++M   G  P+   + I+ R+
Sbjct: 450 LAIKSKMEDNGCIPNAVTFEIIIRS 474



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 225/462 (48%), Gaps = 40/462 (8%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + T N+L+  +       K   F  +   +  ++D  S+G L+ G C+ G
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A ++L  +E+    PNVV+Y ++IDG CK+  +  A  L+ ++   G+     TYT
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE----------- 298
            LI G    G     F   ++M L  ++P +Y YN LI+  C EG V E           
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 299 GFK------------------------LFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G K                        +F  M    V  NV +YN +I GLCK  RV EA
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LL +M    + P+ +TYN LIDG C +G    A  L N++   GQ   VVTY  L+ A
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K  N   A+ L  +M+ERGI P+  TYT LID   +   ++ A E++  +   G   D
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 429

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V+TY V+I GLC +G   EA  + + M +    PN V + ++I    ++  + +A +LL 
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLH 489

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           EM  KGL+  +  +     V  Q+ +  +AE LL++M+  GL
Sbjct: 490 EMIAKGLL--VLDFKVA-DVFVQN-ENDKAEKLLHEMIAKGL 527



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 177/363 (48%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           +P ++ +  ++    K      A  L +++   G+ A   T  +LI      G     F 
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
              K+   G  P   T N L+   C +G+V +     D++  +    + V+Y TL+ GLC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K    + A +LL  ++     PNV+ YN +IDG C     ++A+ L++++ + G  P  +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  LI  F   G    A  L+ EM  + I P    Y ILI++  +  ++++A  + ++M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            K G  P V TY  L+ G C+ G ++ A ++F++M +  + PN   YN+MI G CK    
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A+ LL EM  K +VP+  +Y+S I  LC+ G+   A  L+N+M   G    V  Y  L
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366

Query: 567 YRA 569
             A
Sbjct: 367 LDA 369



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 5/310 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y  +I+A  K     +A      M   G++P   T+++L+  + +     +   +F + 
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  V  +VYS+ I+I G C+   +++A  +L ++      P+ V Y SLIDG CK+G I
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  ++   G  A   TYT L+  L KN         + KM+  G+ P++YTY  L
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++    +LF  +  +    +V TY  +I GLCKE    EA  +  +M+  G 
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN +T+  +I    +  E DKA +L +++ + G    V+ + V    F +  N K A  
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL--LVLDFKV-ADVFVQNENDK-AEK 517

Query: 407 LVREMEERGI 416
           L+ EM  +G+
Sbjct: 518 LLHEMIAKGL 527



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 20/211 (9%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S+ID   KS     AL   ++M   G      T+ SLL  + K+ + DK 
Sbjct: 320 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 379

Query: 161 WLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
              F + + + ++  +Y++  LI G C+ G L  A E+   L   G   +V  YT +I G
Sbjct: 380 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G  + A  +  K+ + G +    T+ ++I  LF    +KD  +  EK         
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF----EKDENDKAEK--------- 486

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
                 L+HE   +G +   FK+ D     E
Sbjct: 487 ------LLHEMIAKGLLVLDFKVADVFVQNE 511


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 199/375 (53%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +++  ++ +L E   +PNV  +  +ID  CK G++  A+ LF ++ E+G +    T+  L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G   +  +  E+M+ +G    + TYN LI+ +C  G++   +  F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NVVT++T +   CKE  V+EA +L  QM++ G++ N  TY  LIDG C AG  D A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++   G   +VVTY VL+    K      A D++R ME+ G+  +E+ YT LI    
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + + EKA  + S M+  G   D+  YG LI GLC    + EA  L   M E+ LEPN +
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +Y  M+    K G    A+ +L ++ + G  PN+ +Y + I  LC+ G   EA    N+M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 552 LKLGLKPSVSLYNIL 566
             LGL P+V  Y  L
Sbjct: 530 RDLGLDPNVQAYTAL 544



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 243/499 (48%), Gaps = 40/499 (8%)

Query: 116 HLKSRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL- 173
           H+  RL+ D++     ++ +    P   TFN ++ F+ K     +    FS  +    L 
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +F  LI G  + G+L++  +++ ++   G   +VV Y +LI+  CK G +E A   F
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G++A   T++  +    K GL ++  + + +M++ G++ + +TY CLI   C  
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ +   L DEM  + V  NVVTY  L+ GLCKE +V EAE +L  M+ AG+  N + Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G      ++KA  L +++K+ G    +  Y  LI+          A  L+ +M+E
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P+ + YT ++D+  +S  + +A  M   +  SGF P+V TY  LI GLC  G++ E
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 474 ASKLFNSMWETKLEPN-----------------------------------DVVYNMMIF 498
           A   FN M +  L+PN                                    VVY  ++ 
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY K+GN + A  L  +M + GL  ++  Y+  I   C     PEA  + ++M+  G+ P
Sbjct: 582 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 641

Query: 559 SVSLYNIL---YRAKNNIE 574
             ++YN L   Y+   N+E
Sbjct: 642 DRAVYNCLISKYQKLGNLE 660



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 201/409 (49%), Gaps = 1/409 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K    + A  YF  M   GV     TF++ +    K     +    F++ R
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+ +++  LI G C+AG L+ A  +L+++   G   NVV YT L+DG CK   + 
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ + R + + G+ A +  YT LI G F N   +       +M+  G+   +  Y  LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              CN  K+ E   L  +M    +  N + Y T++    K  +V EA  +L ++  +G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITY  LIDG C AG  D+A   FN+++  G  P+V  Y  L+    K G    A  L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G++  +V YT L+D +++  ++  AF + + M  SG   D++ Y   I G C 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
              M EA ++F+ M    + P+  VYN +I  Y K GN   A+ L  EM
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 159/312 (50%), Gaps = 3/312 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++D   K R   +A      M  +GVR     + +L+     + + +K     SE +
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +ELD+  +G LI+G C    L++A  +L +++E G  PN +IYT+++D C K+G + 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  + +KI + G      TY  LI GL K G   +    + KM+  G+ P++  Y  L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G ++E  +LF+EM H+ ++ + V Y  L+ G  K+  + +A  L  +M  +G+ 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            ++  Y   I GFC+     +A  +F+++  +G +P    YN LI  + K GN + A  L
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 408 VREMEERGITPS 419
             EME   + PS
Sbjct: 666 QDEMER--VLPS 675



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 160/376 (42%), Gaps = 36/376 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           + + +DA  K  L  +A+  F QM   G+     T+  L+    K+   D   +   E  
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI---------- 217
           R  V L+V ++ +L+ G C+   + +A +VL  +E+ G   N ++YT+LI          
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 218 -------------------------DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                                     G C    ++ AK L  K+ E GL      YT ++
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
              FK+G   +     +K+  +G  P++ TY  LI   C  G + E    F++MR   + 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV  Y  L+ GLCK   + EA +L ++M   G+S + + Y  L+DG+   G    AF L
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++  +G    +  Y   I  F        A ++  EM   GI P    Y  LI  + +
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655

Query: 433 SDDMEKAFEMYSLMQK 448
             ++E+A  +   M++
Sbjct: 656 LGNLEEAISLQDEMER 671



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 1/208 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++DA  KS    +A+    ++LDSG +P   T+ +L+  + K+ S D+    F++ 
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   ++ +V ++  L+ G C+ G LN+A ++ N++   G S + V+YT+L+DG  K G++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  K+ + GL      YT  I G     +  +  E + +M  +G++P    YNCL
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN 314
           I +Y   G + E   L DEM     +C 
Sbjct: 650 ISKYQKLGNLEEAISLQDEMERVLPSCT 677


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 239/498 (47%), Gaps = 35/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+   D A   F +M   G+ P   T+  L+  + K    +     F + R
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +++ VY +  LI G C+ G L++A  +L+ + + G +P    Y+ LI G C+NGD+ 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L R++ E G+    +T+T LI G  K+    +    ++KM  + V P+  T+N +I
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G + + F+L+D+M    +  +  TY +LI GLC    V +A   +  ++ +   
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N  +   L+ GF   G   + + L++++   G    +V++ +++ A  K  + + +  L
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 640

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM+E+G+ P ++ YT +ID+  + ++M +A   +  M   G+SP+  T+ VLI+ LC 
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 700

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVY---------------------------------- 493
            G +  A  L   M    + PN   Y                                  
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF 760

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G CK G    A+ L+ ++ E G  P+  SYS+ I  LC+ G   +A  L N+ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 554 LGLKPSVSLYNILYRAKN 571
            GLKP V  YNI  R  N
Sbjct: 821 KGLKPDVVAYNIFIRWCN 838



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 226/444 (50%), Gaps = 4/444 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILIKGCC 186
           F +ML SGV      + + +    +S + D  +G +   E+   V+     + +L+ G C
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE-GVKASAVPYNVLMYGLC 244

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +   + +A EV N +  +G + + V Y +L+ G C+  ++E A  +   +  LG V ++ 
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
             + +I  L K  L ++ F    K+   G+ P+++ YN LI + C   +  +  +LF EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R +  N VTY  LI  LCK   +++A  L D+M+  GI   V  YN LI+G+C  G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L + +   G +P+  +Y+ LI    + G+     +L REM ERGI  +  T+T L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ F +   M++A  ++  M  S   P+  T+ V+I G C+ GN+++A +L++ M E  L
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P++  Y  +I G C      +A   + ++     V N  S ++ +    ++G++ E   
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 547 LLNQMLKLGLKPS-VSLYNILYRA 569
           L ++M   G+K   VS   I+Y A
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAA 628



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 196/409 (47%), Gaps = 35/409 (8%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +AF +  +L ++G  PNV  Y +LID  CKN   + A  LF+++   GL   + TY +
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK-----------VSEG 299
           LI  L K G+ +D    ++KM+  G+  ++Y YN LI+ YC +G            V EG
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438

Query: 300 F------------------------KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                                    +L  EM  R +A N  T+  LI G CK+ ++ EA 
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL D+M  + + PN +T+N +I+G+C  G   KAF+L++Q+   G  P   TY  LI   
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                   A++ V ++E      +  + T L+  F R     + + ++  M   G   D+
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDL 618

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            ++ ++++    + + +++  LF  M E  ++P+D+ Y  MI    KE N  +AL    +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           M   G  PN  +++  I  LC+ G    AE+L  +ML   + P+   YN
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 219/465 (47%), Gaps = 5/465 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A+ +SR  D A     +M   GV+  +  +N L+  + K+    +      +N
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA--VEVKN 257

Query: 168 ---RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 V  D  ++  L+ G C   +L  A  + + +  +GF P+    + +ID   K  
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L  K+G+LG+V     Y  LI  L KN    D    +++M   G+ P+  TY 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G + +   LFD+MR + +   V  YN+LI G CK+  +  A  LL  M   
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P   +Y+ LI G C  G+      L  ++   G + +  T+  LI  F K      A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + L  +M +  + P+EVT+ ++I+ +    ++ KAF++Y  M + G  PD YTY  LI G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+   + +A++    +  +    N+     +++G+ +EG       L  EM  +G+  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + S++  +    +     ++ VL  +M + G+KP    Y  +  A
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 182/426 (42%), Gaps = 70/426 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+   K +  D+A   F +M+DS V P   TFN                       
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN----------------------- 517

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      ++I+G C  G++ KAF++ +Q+ EMG  P+   Y SLI G C    + +
Sbjct: 518 -----------VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------------- 273
           A      +     V    + T L+ G F+ G   + +  +++M +               
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 274 --------------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                GV P    Y C+I     E  + +    +D+M     + 
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 686

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VT+  LI  LCK   +  AE L  +M    + PN  TYN  +D F   G+ +KA  L 
Sbjct: 687 NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 746

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G   S+V++N+LI+   KAG  + A DL+ ++ E G +P  ++Y+ +I    + 
Sbjct: 747 SAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+ KAFE+++ M   G  PDV  Y + I    + G   +A  ++ +M  + ++PN   Y
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 494 NMMIFG 499
             ++ G
Sbjct: 866 RALLSG 871



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 169/346 (48%), Gaps = 4/346 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGIL 181
           +A   + QM++ G++P + T+ SL+  +  +    K   F +  EN   V L+ +S   L
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-LNNFSLTAL 589

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G    G   + + + +++   G   ++V +T ++    K  D E++ +LFR++ E G+
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 YT +I  L K          +++M ++G SP+  T+  LI+  C  G +     
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 709

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM    V  N  TYN  +     E  +++A+ L   M + G   +++++N LI G C
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLC 768

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            AG+  +A  L +++  +G SP  ++Y+ +I    K G+   A +L  EM  +G+ P  V
Sbjct: 769 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVV 828

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            Y I I       + +KA  +Y+ M +SG  P+  TY  L+ G+ +
Sbjct: 829 AYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 239/498 (47%), Gaps = 35/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+   D A   F +M   G+ P   T+  L+  + K    +     F + R
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +++ VY +  LI G C+ G L++A  +L+ + + G +P    Y+ LI G C+NGD+ 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L R++ E G+    +T+T LI G  K+    +    ++KM  + V P+  T+N +I
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G + + F+L+D+M    +  +  TY +LI GLC    V +A   +  ++ +   
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N  +   L+ GF   G   + + L++++   G    +V++ +++ A  K  + + +  L
Sbjct: 581 LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 640

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM+E+G+ P ++ YT +ID+  + ++M +A   +  M   G+SP+  T+ VLI+ LC 
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCK 700

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVY---------------------------------- 493
            G +  A  L   M    + PN   Y                                  
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF 760

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G CK G    A+ L+ ++ E G  P+  SYS+ I  LC+ G   +A  L N+ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 554 LGLKPSVSLYNILYRAKN 571
            GLKP V  YNI  R  N
Sbjct: 821 KGLKPDVVAYNIFIRWCN 838



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 225/443 (50%), Gaps = 3/443 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILIKGCC 186
           F +ML SGV      + + +    +S + D  +G +   E+   V+     + +L+ G C
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE-GVKASAVPYNVLMYGLC 244

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +   + +A EV N +  +G + + V Y +L+ G C+  ++E A  +   +  LG V ++ 
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
             + +I  L K  L ++ F    K+   G+ P+++ YN LI + C   +  +  +LF EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R +  N VTY  LI  LCK   +++A  L D+M+  GI   V  YN LI+G+C  G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L + +   G +P+  +Y+ LI    + G+     +L REM ERGI  +  T+T L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ F +   M++A  ++  M  S   P+  T+ V+I G C+ GN+++A +L++ M E  L
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P++  Y  +I G C      +A   + ++     V N  S ++ +    ++G++ E   
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L ++M   G+K  +  + I+  A
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYA 627



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 196/409 (47%), Gaps = 35/409 (8%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +AF +  +L ++G  PNV  Y +LID  CKN   + A  LF+++   GL   + TY +
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK-----------VSEG 299
           LI  L K G+ +D    ++KM+  G+  ++Y YN LI+ YC +G            V EG
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438

Query: 300 F------------------------KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                                    +L  EM  R +A N  T+  LI G CK+ ++ EA 
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL D+M  + + PN +T+N +I+G+C  G   KAF+L++Q+   G  P   TY  LI   
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                   A++ V ++E      +  + T L+  F R     + + ++  M   G   D+
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDL 618

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            ++ ++++    + + +++  LF  M E  ++P+D+ Y  MI    KE N  +AL    +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           M   G  PN  +++  I  LC+ G    AE+L  +ML   + P+   YN
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 219/465 (47%), Gaps = 5/465 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A+ +SR  D A     +M   GV+  +  +N L+  + K+    +      +N
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA--VEVKN 257

Query: 168 ---RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 V  D  ++  L+ G C   +L  A  + + +  +GF P+    + +ID   K  
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L  K+G+LG+V     Y  LI  L KN    D    +++M   G+ P+  TY 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G + +   LFD+MR + +   V  YN+LI G CK+  +  A  LL  M   
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P   +Y+ LI G C  G+      L  ++   G + +  T+  LI  F K      A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + L  +M +  + P+EVT+ ++I+ +    ++ KAF++Y  M + G  PD YTY  LI G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+   + +A++    +  +    N+     +++G+ +EG       L  EM  +G+  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + S++  +    +     ++ VL  +M + G+KP    Y  +  A
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 182/426 (42%), Gaps = 70/426 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+   K +  D+A   F +M+DS V P   TFN                       
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN----------------------- 517

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      ++I+G C  G++ KAF++ +Q+ EMG  P+   Y SLI G C    + +
Sbjct: 518 -----------VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------------- 273
           A      +     V    + T L+ G F+ G   + +  +++M +               
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 274 --------------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                GV P    Y C+I     E  + +    +D+M     + 
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 686

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VT+  LI  LCK   +  AE L  +M    + PN  TYN  +D F   G+ +KA  L 
Sbjct: 687 NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 746

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G   S+V++N+LI+   KAG  + A DL+ ++ E G +P  ++Y+ +I    + 
Sbjct: 747 SAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+ KAFE+++ M   G  PDV  Y + I    + G   +A  ++ +M  + ++PN   Y
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 494 NMMIFG 499
             ++ G
Sbjct: 866 RALLSG 871



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 169/346 (48%), Gaps = 4/346 (1%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGIL 181
           +A   + QM++ G++P + T+ SL+  +  +    K   F +  EN   V L+ +S   L
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-LNNFSLTAL 589

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G    G   + + + +++   G   ++V +T ++    K  D E++ +LFR++ E G+
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 YT +I  L K          +++M ++G SP+  T+  LI+  C  G +     
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 709

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  EM    V  N  TYN  +     E  +++A+ L   M + G   +++++N LI G C
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLC 768

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            AG+  +A  L +++  +G SP  ++Y+ +I    K G+   A +L  EM  +G+ P  V
Sbjct: 769 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVV 828

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            Y I I       + +KA  +Y+ M +SG  P+  TY  L+ G+ +
Sbjct: 829 AYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 229/476 (48%), Gaps = 38/476 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           + ++  SGV     T N ++  + K    +K   F SE + K V  D+ ++  LI     
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G + +AFE+++ +   GFSP V  Y ++I+G CK+G  ERAK +F ++   GL     T
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSP---------SLYT---------------- 282
           Y  L+    K G   +    +  M+   V P         SL+T                
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392

Query: 283 ----------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
                     Y  LI  YC +G +SE   L +EM  +  A +VVTYNT++ GLCK   + 
Sbjct: 393 EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 452

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA++L ++M   G+ P+  T   LIDG C  G    A  LF ++K       VVTYN L+
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLL 512

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F K G+   A ++  +M  + I P+ ++++IL+++      + +AF ++  M      
Sbjct: 513 DGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P V     +I G C  GN  +       M      P+ + YN +I+G+ KE N  +A  L
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGL 632

Query: 513 LGEMNEK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +M EK  GLVP++ +Y+S +   C++ +  EAE +L +M++ G+ P  S Y  L
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSL 688



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 3/419 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K    ++A   F +ML SG+ P S T+ SLL+   K     +    FS+ R
Sbjct: 298 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMR 357

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  D+  F  ++     +G+L+KA    N ++E G  P+ VIYT LI G C+ G I 
Sbjct: 358 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 417

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ + G      TY  ++ GL K  +  +  + + +M   G+ P  YT   LI
Sbjct: 418 EAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILI 477

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +    +LF +M+ + +  +VVTYNTL+ G  K   +  A+ +   M    I 
Sbjct: 478 DGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 537

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P  I+++ L++  C  G   +AFR+++++ S    P+V+  N +I+ + ++GN+      
Sbjct: 538 PTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIF 597

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGL 465
           + +M   G  P  ++Y  LI  FV+ ++M KAF +   M+  + G  PDV+TY  ++HG 
Sbjct: 598 LEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGF 657

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           C +  MKEA  +   M E  + P+   Y  +I G+  + N   A R   EM ++G  P+
Sbjct: 658 CRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 255/528 (48%), Gaps = 11/528 (2%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
            +HT  S+S ++ +L+    S   + AQ+ +L++I     S      SL+        + 
Sbjct: 99  FKHTSLSLSAMIHILVR---SGRLSDAQSCVLRMIRRSGVSRVEIVNSLV-------STY 148

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SN  +   +++ +I   +++R   +A   F  +   G     +  N+L+  +++    + 
Sbjct: 149 SNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVEL 208

Query: 160 GWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W  + E +R  V ++VY+  I++   C+ G + K    L++++E G  P++V Y +LI 
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
                G +E A  L   +   G     +TY  +I GL K+G  +   E + +M  +G+SP
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
              TY  L+ E C +G   E   +F +MR R+V  ++V +++++    +   + +A    
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           + +K AG+ P+ + Y  LI G+C  G   +A  L N++   G +  VVTYN ++    K 
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A  L  EM ERG+ P   T TILID   +  +++ A E++  M++     DV TY
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G    G++  A +++  M   ++ P  + +++++   C +G+   A R+  EM  
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           K + P +   +S I   C+ G   + E+ L +M+  G  P    YN L
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 205/392 (52%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +LI+   +A  L +A+E    L   G++ ++    +LI    + G +E A  ++++I 
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+    +T  +++  L K+G  +    F  ++Q  GV P + TYN LI  Y ++G + 
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E F+L   M  +  +  V TYNT+I GLCK  + + A+ +  +M  +G+SP+  TY  L+
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C  G+  +   +F+ ++S    P +V ++ ++  F+++GN   A      ++E G+ 
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  V YTILI  + R   + +A  + + M + G + DV TY  ++HGLC +  + EA KL
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           FN M E  L P+     ++I G+CK GN   A+ L  +M EK +  ++ +Y++ +    +
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G    A+ +   M+   + P+   ++IL  A
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNA 549



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 191/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI      G +  A+ +  ++   G   NV     +++  CK+G +E+      ++ E G
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI      GL ++ FE    M   G SP +YTYN +I+  C  GK     
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F EM    ++ +  TY +L+   CK+    E E +   M+   + P+++ ++ ++  F
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  DKA   FN +K  G  P  V Y +LI+ + + G    A +L  EM ++G     
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  ++    +   + +A ++++ M + G  PD YT  +LI G C  GN++ A +LF  
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E +++ + V YN ++ G+ K G+   A  +  +M  K ++P   S+S  +  LC  G 
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  + ++M+   +KP+V + N + + 
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKG 584



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 156/316 (49%), Gaps = 3/316 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  + +  +  +A+   ++ML  G      T+N++L  + K     +    F+E 
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + +  D Y+  ILI G C+ G+L  A E+  +++E     +VV Y +L+DG  K GDI
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + AK ++  +    ++ T  ++++L+  L   G   + F  +++M    + P++   N +
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMA 344
           I  YC  G  S+G    ++M       + ++YNTLI G  KE  + +A  L+ +M  K  
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+V TYN ++ GFC   +  +A  +  ++   G +P   TY  LI  F    N   A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701

Query: 405 SDLVREMEERGITPSE 420
                EM +RG +P +
Sbjct: 702 FRFHDEMLQRGFSPDD 717


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 234/465 (50%), Gaps = 6/465 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++++A  K+     A  +  ++L  G    ++   SL++   +     + +  F    
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C+     YS  ILI G CEAG L +AF++  ++ E G  P+   YT LI   C  G
Sbjct: 257 KEENCRPNSVTYS--ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 314

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ++A  +  ++     V   HTYT+LI  L + G  ++    + KM  +G+ P + T+N
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 374

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC EG V   F+L   M       N+ TYN L+ GLC+  +  +A  LL ++   
Sbjct: 375 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 434

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+ +TYN L+DGFC  G+ + AF +FN + S G  P   T+  LI    K G  + A
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + ++  M ++GI+  EVT+T LID   +    +    ++  M ++      +T+   +  
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L     + EA+ +   M +  L P+ V + ++I G+C+ G +  +L++L  M + G  PN
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +Y+  I  LC +G+  EAE +L  M   G+ P+   Y +L +A
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 5/433 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N VT S L   + +A    RL ++A     +M++ G +P + T+  L+         DK 
Sbjct: 264 NSVTYSILIHGLCEA---GRL-EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 319

Query: 161 WLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
                E   K  + +V+++ ILI   C  G + +A  V  ++ + G  P ++ + +LI+G
Sbjct: 320 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 379

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G +  A  L   + +        TY  L+ GL +       F    ++  NG+ P 
Sbjct: 380 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 439

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             TYN L+  +C EG+++  F +F+ M    +  +  T+  LI GLCK  R+++A  +L 
Sbjct: 440 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 499

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M   GIS + +T+  LIDG C  G+      LF  +  N    +  T+N  + A  K  
Sbjct: 500 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 559

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A+ ++ +M + G+ PS VT+TILI+   R+ +   + +M   M+++G SP+VYTY 
Sbjct: 560 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 619

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++I+GLC  G ++EA  +  SM    + PN   Y +++  + K G   RA +++  M + 
Sbjct: 620 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 679

Query: 520 GLVPNIASYSSTI 532
           G  PN   YS+ +
Sbjct: 680 GCQPNSHIYSALL 692



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 224/489 (45%), Gaps = 36/489 (7%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V     Y  +ID   +    ++A   F +ML  G+ P   TFN+L+    K     +GW+
Sbjct: 332 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK-----EGWV 386

Query: 163 F--------FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                      +  CK  +  Y+   L++G C      KAF +L ++ + G  P+ V Y 
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNE--LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 444

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            L+DG CK G +  A  +F  +   GL     T+T LI GL K G  +        M   
Sbjct: 445 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+S    T+  LI  +C  GK  +   LF+ M          T+N  +  L K+ ++ EA
Sbjct: 505 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEA 564

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             +L +M   G+ P+V+T+  LI+G C AGET  + ++  ++K  G SP+V TY ++I  
Sbjct: 565 NAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING 624

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
               G  + A  ++  M   G++P+  TY +L+ + V++  +++AF++ S M K+G  P+
Sbjct: 625 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 684

Query: 455 VYTYGVLIHGLCMKGNMKEASKLF----------------NSMWETKLE----PNDVVYN 494
            + Y  L+ G  +      A  L                 N+    +++    P + +YN
Sbjct: 685 SHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYN 744

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ G CKEG    A +L  +M + GL P+ A  SS I   C+  K+      +  +L  
Sbjct: 745 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDN 803

Query: 555 GLKPSVSLY 563
              PS + Y
Sbjct: 804 KFVPSFASY 812



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 188/432 (43%), Gaps = 59/432 (13%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           R Y  +++   +   S +A     +++D+G+ P   T+N L+    K    +  + +F S
Sbjct: 406 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 465

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N   +E D ++F  LI G C+ G L +A  +L  + + G S + V +T+LIDG CK G 
Sbjct: 466 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 525

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +    LF  + E   + T HT+   +  L K+    +      KM   G+ PS+ T+  
Sbjct: 526 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 585

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C  G+ +   K+ + M+    + NV TY  +I GLC   RV+EAE +L  M   G
Sbjct: 586 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 645

Query: 346 ISPNVIT-----------------------------------YNKLIDGFC--------- 361
           +SPN  T                                   Y+ L+ GF          
Sbjct: 646 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 705

Query: 362 --------DA----GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
                   DA     E +    L N++K  G  P+   YN L+    K G    A  L +
Sbjct: 706 ALSSTGDLDARSLSSEENDNNCLSNEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQ 764

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M + G+ P +   +I I+ + ++   +   E   L+  + F P   +Y  +IHGL  +G
Sbjct: 765 DMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 823

Query: 470 NMKEASKLFNSM 481
            ++EA KL + +
Sbjct: 824 RVQEAQKLVSDL 835



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            F ++  M +       + Y T++  LCK   VQ AE    ++   G   +      L+ 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 359 GFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             C   +  +AFR+F ++ K     P+ VTY++LI    +AG  + A  L +EM E+G  
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS  TYT+LI +       +KA +M   M      P+V+TY +LI  LC +G ++EA+ +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M +  L P  + +N +I GYCKEG    A +LL  M +    PNI +Y+  +  LC+
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             K  +A +LL +++  GL P    YNIL
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G   S   Y+ L+    + +    AF +Y  M   GF      Y  +++ LC  G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPNIASYS 529
           ++ A      +       +  V   ++   C+  +   A R+  +M+ E+   PN  +YS
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 269

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             I  LC+ G+  EA  L  +M++ G +PS   Y +L +AK +I
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 313


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 224/448 (50%), Gaps = 2/448 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D  L  F++ML     P    F+ LL  +++   +      FS+   K +   + +  IL
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    L+ AF +L  + +MGF PN+V + +LI+G C NG + +A      +   G 
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              + +Y  LI GL KNG  +D  +  +KM+ + V P+L TY+ +I   C +  +++  +
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF  +  R +  +VV YN+LI G C   + +EA RLL  M    I+P+  T+N L+D  C
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC 276

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G   +A  +F  +   G+ P +VTYN L+  F  + N   A +L   M +RG+ P  +
Sbjct: 277 KEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVL 336

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y +LI+ + + D +++A  ++  ++     P++ TY  LI GLC  G M    +L + M
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +    P+ V YN+ +  +CK     +A+ L  ++  +G+ P+   Y   +   C+  K 
Sbjct: 397 CDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKL 455

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             AE  L  +L  G  P+V  Y I+  A
Sbjct: 456 KIAEEALQHLLIHGCCPNVRTYTIMINA 483



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 245/523 (46%), Gaps = 28/523 (5%)

Query: 36  SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL-CHLTQ 94
           +R   +H P  I +  +LL + +    +  A +L  ++ S  IT S  T   L+ C+  Q
Sbjct: 44  NRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQ 103

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
                               AHL    S         +L  G +P   TFN+L+     +
Sbjct: 104 --------------------AHLSFAFS-----LLGTILKMGFQPNMVTFNTLINGFCIN 138

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
               K   F  +   K   LD +S+G LI G C+ G    A ++L ++EE    PN++ Y
Sbjct: 139 GMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITY 198

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           +++IDG CK+  I  A  LF  +   G++     Y  LI G    G  ++       M  
Sbjct: 199 STVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVR 258

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P  YT+N L+   C EG++ E   +F  M  R    ++VTYN L+ G C    V E
Sbjct: 259 GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSE 318

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  L ++M   G+ P+V+ YN LI+G+C     D+A  LF +++     P++ TYN LI 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLID 378

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              K G      +LV EM +RG +P  VTY I +D+F +S   EKA  ++  + + G  P
Sbjct: 379 GLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWP 437

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D Y Y V++   C    +K A +    +      PN   Y +MI   CK+ +   A+ LL
Sbjct: 438 DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLL 497

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
            +M++    P+  ++ + IG L +  +  +AE L  +M++ GL
Sbjct: 498 SKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 35/381 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+   K+  +  AL    +M +  VRP   T+++++  + K          FS   
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + +DV ++  LI GCC  G   +A  +L  +     +P+   +  L+D  CK G I 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + G      TY  L+ G   +    +  E + +M   G+ P +  YN LI
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC    V E   LF E+R + +  N+ TYN+LI GLCK  R+   + L+D+M   G S
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKS----------------------------- 378
           P+++TYN  +D FC +   +KA  LF Q+                               
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEAL 462

Query: 379 -----NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
                +G  P+V TY ++I A  K  +   A  L+ +M++    P  VT+  +I +    
Sbjct: 463 QHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQER 522

Query: 434 DDMEKAFEMYSLMQKSGFSPD 454
           ++ +KA ++   M + G   D
Sbjct: 523 NETDKAEKLRLEMIERGLVND 543



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 43/351 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++ID   K RL   AL  F  +   G+      +NSL    I  C     W     L 
Sbjct: 198 YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL----IHGCCSVGQWREATRLL 253

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               R  +  D Y+F IL+   C+ G + +A  V   + + G  P++V Y +L++G C +
Sbjct: 254 TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLS 313

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            ++  A+ LF ++ + GL      Y VLI G  K  +  +    +++++   + P+L TY
Sbjct: 314 NNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATY 373

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM-------------- 329
           N LI   C  G++S   +L DEM  R  + ++VTYN  +   CK                
Sbjct: 374 NSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ 433

Query: 330 --------------------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
                               +++ AE  L  + + G  PNV TY  +I+  C     D+A
Sbjct: 434 GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEA 493

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             L +++  N   P  VT+  +I A  +   +  A  L  EM ERG+   E
Sbjct: 494 MTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 5/190 (2%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V     Y S+ID   K            +M D G  P   T+N  L    KS  ++K 
Sbjct: 365 NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKA 424

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
              F +    +  D Y + ++++  C+   L  A E L  L   G  PNV  YT +I+  
Sbjct: 425 ISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINAL 484

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK+   + A  L  K+ +        T+  +I  L     +++  +  EK++L  +   L
Sbjct: 485 CKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL----QERNETDKAEKLRLEMIERGL 540

Query: 281 YTYNC-LIHE 289
                 L+HE
Sbjct: 541 VNDEARLVHE 550


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 199/375 (53%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +++  ++ +L E   +PNV  +  +ID  CK G++  A+ LF ++ E+G +    T+  L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G   +  +  E+M+ +G    + TYN LI+ +C  G++   +  F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NVVT++T +   CKE  V+EA +L  QM++ G++ N  TY  LIDG C AG  D A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++   G   +VVTY VL+    K      A D++R ME+ G+  +E+ YT LI    
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + + EKA  + S M+  G   D+  YG LI GLC    + EA  L   M E+ LEPN +
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +Y  M+    K G    A+ +L ++ + G  PN+ +Y + I  LC+ G   EA    N+M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 552 LKLGLKPSVSLYNIL 566
             LGL P+V  Y  L
Sbjct: 530 RDLGLDPNVQAYTAL 544



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 243/499 (48%), Gaps = 40/499 (8%)

Query: 116 HLKSRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL- 173
           H+  RL+ D++     ++ +    P   TFN ++ F+ K     +    FS  +    L 
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +F  LI G  + G+L++  +++ ++   G   +VV Y +LI+  CK G +E A   F
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G++A   T++  +    K GL ++  + + +M++ G++ + +TY CLI   C  
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ +   L DEM  + V  NVVTY  L+ GLCKE +V EAE +L  M+ AG+  N + Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G      ++KA  L +++K+ G    +  Y  LI+          A  L+ +M+E
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P+ + YT ++D+  +S  + +A  M   +  SGF P+V TY  LI GLC  G++ E
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 474 ASKLFNSMWETKLEPN-----------------------------------DVVYNMMIF 498
           A   FN M +  L+PN                                    VVY  ++ 
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY K+GN + A  L  +M + GL  ++  Y+  I   C     PEA  + ++M+  G+ P
Sbjct: 582 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 641

Query: 559 SVSLYNIL---YRAKNNIE 574
             ++YN L   Y+   N+E
Sbjct: 642 DRAVYNCLISKYQKLGNLE 660



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 209/426 (49%), Gaps = 2/426 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K    + A  YF  M   GV     TF++ +    K     +    F++ R
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+ +++  LI G C+AG L+ A  +L+++   G   NVV YT L+DG CK   + 
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ + R + + G+ A +  YT LI G F N   +       +M+  G+   +  Y  LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              CN  K+ E   L  +M    +  N + Y T++    K  +V EA  +L ++  +G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITY  LIDG C AG  D+A   FN+++  G  P+V  Y  L+    K G    A  L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G++  +V YT L+D +++  ++  AF + + M  SG   D++ Y   I G C 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M EA ++F+ M    + P+  VYN +I  Y K GN   A+ L  EM E+ L     S
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM-ERVLPSCTDS 679

Query: 528 YSSTIG 533
            ++T G
Sbjct: 680 DTATDG 685



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 1/208 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++DA  KS    +A+    ++LDSG +P   T+ +L+  + K+ S D+    F++ 
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   ++ +V ++  L+ G C+ G LN+A ++ N++   G S + V+YT+L+DG  K G++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  K+ + GL      YT  I G     +  +  E + +M  +G++P    YNCL
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN 314
           I +Y   G + E   L DEM     +C 
Sbjct: 650 ISKYQKLGNLEEAISLQDEMERVLPSCT 677


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 236/464 (50%), Gaps = 28/464 (6%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++AL + + M + GV P   T+N L             W          +  D+ ++ IL
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G++ ++F++  ++   G   ++V YT L+   CK+G I+ A +L  ++  +GL
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 242 VATQHTYT---------------------------VLICGLFKNGLQKDGFEFYEKMQLN 274
                TY+                            +I GLF+ G   +   +++ +  +
Sbjct: 442 KPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 501

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
            V+  +  YN +I  Y   G + E  + + ++  + ++  +VT+N+LI G CK+ ++ EA
Sbjct: 502 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 561

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +LLD +K+ G+ P  +TY  L++G+C+ G+    F + +++++    P+ +TY V+++ 
Sbjct: 562 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 621

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K G    +  L++ M  RG+ P ++TY  +I SF ++ D++KAF++++ M +    P 
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             TY VLI+GLC+ GN+K+A +L  ++ +  +    V Y  +I  +C +G+   AL    
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 741

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           +M E+G   +I  YS+ I  LC+     +A+     ML  G+ P
Sbjct: 742 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 785



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 240/483 (49%), Gaps = 31/483 (6%)

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
           A+ ++ +   ALF   +M    ++    T+NSLL  +  +   D  W  ++E +   V  
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQ 233

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           + Y+  ILI G C    L  A   L +     F P+VV + +L+ G CK G ++ AK  F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + GL+   ++Y +L+ GL   G  ++  EF   M+ +GV P + TYN L + +   
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +S  +K+   M    +  ++VTY  LICG C+   ++E+ +L ++M   G+  +++TY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV-----LIRAFSKA------GNSK 402
             L+   C +G  D+A  L ++++  G  P ++TY+       I  + +        NS 
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSF 473

Query: 403 MASDLVREMEERG-----------ITPSEVT-----YTILIDSFVRSDDMEKAFEMYSLM 446
           + S ++  + E+G           +T S+V      Y I+ID + +  ++ +A   Y  +
Sbjct: 474 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G SP + T+  LI+G C KG + EA KL +++    L P  V Y  ++ GYC+EG+ 
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +    +L EM  K + P   +Y+  +  LC++G+  E+  LL  M   GL P    YN +
Sbjct: 594 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 653

Query: 567 YRA 569
            ++
Sbjct: 654 IQS 656



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 205/417 (49%), Gaps = 11/417 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ +  KS   D+A+   H+M   G++P   T++   +         +  +   E  
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAV---------EEAIELYEEM 463

Query: 169 CKVELDVYSF--GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           C   +   SF    +I G  E G +++A    + + +   +  +++Y  +IDG  K G+I
Sbjct: 464 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 523

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   +++I E G+  T  T+  LI G  K G   +  +  + ++++G+ P+  TY  L
Sbjct: 524 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTL 583

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++ YC EG +   F +  EM  + +    +TY  ++ GLCKE R+ E+ +LL  M   G+
Sbjct: 584 MNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 643

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ ITYN +I  FC A +  KAF+L NQ+  +   PS VTYNVLI      GN K A  
Sbjct: 644 FPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADR 703

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  ++++ I  ++V YT +I +     D++ A   +  M + GF   +  Y  +I+ LC
Sbjct: 704 LLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC 763

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            +  + +A   F  M    + P+  +  +M+  + + G+      +   M + GL+P
Sbjct: 764 KRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 162/347 (46%), Gaps = 30/347 (8%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            + +L C   +  +  D      KM++  +  S+ TYN L++   N       + +++E+
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMWDVYNEI 226

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +   V  N  T   LI GLC++ R+Q+A   L +       P+V+++N L+ GFC  G  
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   F  +   G  P V +YN+L+     AG+ + A +   +ME  G+ P  VTY IL
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
            + F     +  A+++   M  +G +PD+ TY +LI G C  GN++E+ KL   M    L
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY------------------ 528
           + + V Y +++   CK G    A+ LL EM   GL P++ +Y                  
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 529 ---------SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                    S+ I  L + G   EA++  + + K  +   + LYNI+
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIM 513



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 32/288 (11%)

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK------------- 355
           R+   N V ++ L C   +   V +A  +L +MK+  +  ++ TYN              
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD 221

Query: 356 -------------------LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
                              LIDG C       A     +       PSVV++N L+  F 
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G+  +A      M + G+ P   +Y IL+     +  ME+A E  + M+  G  PD+ 
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +L +G  + G +  A K+   M    L P+ V Y ++I G+C+ GN   + +L  +M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             +GL  +I +Y+  +  LC+ G+  EA +LL++M  +GLKP +  Y+
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 233/468 (49%), Gaps = 5/468 (1%)

Query: 99  SSNPVT-KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S PV   +  Y  II          +AL     ML  G +P   T+  LL  V KS  F
Sbjct: 137 ASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            +      E R K    ++ ++ ++I G C  G ++ A E LN+L   GF P+ V YT++
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           + G C     E  + LF ++ E   +  + T+ +L+    + G+ +   +  E+M  +G 
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           + +    N +I+  C +G+V + F+  + M     + + ++Y T++ GLC+  R ++A+ 
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL +M      PN +T+N  I   C  G  ++A  L  Q+  +G   ++VTYN L+  F 
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
             G    A +L   M  +   P+ +TYT L+     ++ ++ A E+ + M +   +P+V 
Sbjct: 437 VQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV 493

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T+ VL+   C KG M EA +L   M E    PN + YN ++ G   + NS  AL LL  +
Sbjct: 494 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGL 553

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              G+ P+I +YSS IGVL ++ +  EA  + + +  LG++P   +YN
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 3/377 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DL +A  ++++    G +P+V + T LI   C+ G    A  + R     G       Y 
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G           M    V+P  YTY  +I   C+ G+V E   L D+M HR
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +VVTY  L+  +CK     +A  +LD+M+  G +PN++TYN +I+G C  G  D A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
               N+L S G  P  V+Y  +++    A   +   +L  EM E+   P+EVT+ +L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F R   +E+A ++   M   G + +     ++I+ +C +G + +A +  N+M      P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y  ++ G C+      A  LL EM  K   PN  ++++ I +LCQ G   +A +L+ 
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414

Query: 550 QMLKLGLKPSVSLYNIL 566
           QM + G + ++  YN L
Sbjct: 415 QMSEHGCEVNIVTYNAL 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G + +V  Y +L+ G C+ G ++ A+   
Sbjct: 77  DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR--- 133

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I  + +    +TYT +I GL   G   +     + M   G  PS+ TY  L+   C  
Sbjct: 134 RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS 193

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  ++ DEMR +    N+VTYN +I G+C+E RV +A   L+++   G  P+ ++Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             ++ G C A   +    LF ++      P+ VT+++L+R F + G  + A  ++ +M  
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G   +     I+I++  +   ++ AF+  + M   G SPD  +Y  ++ GLC     ++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M      PN+V +N  I   C++G   +A  L+ +M+E G   NI +Y++ + 
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             C  G+   A   L     +  KP+   Y  L     N E
Sbjct: 434 GFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAE 471



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 207/450 (46%), Gaps = 41/450 (9%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           D   +  +  R    +DV+++  L+ G C  G L+ A  +   +  M  +P+   YT +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPII 152

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C  G +  A  L   +   G   +  TYTVL+  + K+       E  ++M+  G +
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 278 PSLYTYNCLIHEYCNEGKVSE-----------GFK------------------------L 302
           P++ TYN +I+  C EG+V +           GF+                        L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM  +    N VT++ L+   C+   V+ A ++L+QM   G + N    N +I+  C 
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  D AF+  N + S G SP  ++Y  +++   +A   + A +L++EM  +   P+EVT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +   I    +   +E+A  +   M + G   ++ TY  L++G C++G +  A +LF SM 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
               +PN + Y  ++ G C       A  LL EM +K   PN+ +++  +   CQ G   
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           EA  L+ QM++ G  P++  YN L     N
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITN 539



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     ++  +     F +M++    P   TF+ L+ F  +    ++        S
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C     + +  I+I   C+ G ++ AF+ LN +   G SP+ + YT+++ G C+   
Sbjct: 313 GHGCAANTTLCN--IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L +++        + T+   IC L + GL +      E+M  +G   ++ TYN 
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ +C +G+V    +LF  M  +    N +TY TL+ GLC   R+  A  LL +M    
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +PNV+T+N L+  FC  G  D+A  L  Q+  +G +P+++TYN L+   +   NS+ A 
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEAL 547

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +   G++P  VTY+ +I    R D +E+A +M+ ++Q  G  P    Y  ++  L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C + N   A   F  M      PN++ Y  +I G   E        LL E+  +G++
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N  +R      +   A+ LV     RG  P     T LI +  R      A  +    ++
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           SG + DV+ Y  L+ G C  G +  A +L  SM    + P+   Y  +I G C  G    
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           AL LL +M  +G  P++ +Y+  +  +C+   + +A  +L++M   G  P++  YN++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +  DD+ +A  +       G +PDVY    LI  LC +G   +A+++  +   +    +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN ++ GYC+ G    A RL+  M    + P+  +Y+  I  LC  G+  EA  LL+
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            ML  G +PSV  Y +L  A
Sbjct: 170 DMLHRGCQPSVVTYTVLLEA 189


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 281/669 (42%), Gaps = 134/669 (20%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P K  S FNW   Q +  T Q +     L L   +  S   A +++ ++I      +   
Sbjct: 77  PSKLLSFFNWVDSQKV--TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVW 134

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              + C  +Q F   S+      L+  + D ++     ++A+F F   +   + PR +  
Sbjct: 135 SSIVRC--SQEFVGKSD---DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRC 189

Query: 145 NSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             LL  +++    D  W ++       V  DV ++ +LI   C AG++    +VL + E+
Sbjct: 190 KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249

Query: 204 ---------------------MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
                                 G  P    Y  LIDG CK   +E AK L  ++  LG+ 
Sbjct: 250 EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309

Query: 243 ATQHTYTVLICGLFKN-----------------------------------GLQKDGFEF 267
              HTY++LI GL K                                    G+ +     
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC- 326
           ++ M  +G+ P    Y  LI  YC E  V +G++L  EM+ R +  +  TY T++ G+C 
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 327 -----------KEM-----------------------RVQEAERLLDQMKMAGISPNVIT 352
                      KEM                       R  +A R+L +MK  GI+P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI G   A   D+A     ++  NG  P+  TY   I  + +A     A   V+EM 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 413 ERGITPSEV-----------------------------------TYTILIDSFVRSDDME 437
           E G+ P++V                                   TYT+L++   ++D ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A E++  M+  G +PDV++YGVLI+G    GNM++AS +F+ M E  L PN ++YNM++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+C+ G   +A  LL EM+ KGL PN  +Y + I   C+ G   EA  L ++M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 558 PSVSLYNIL 566
           P   +Y  L
Sbjct: 730 PDSFVYTTL 738



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 254/539 (47%), Gaps = 74/539 (13%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K  +Y+  I    K  + ++A   F  M+ SG+ P++  + SL+    +  +  +G+   
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E + + + +  Y++G ++KG C +GDL+ A+ ++ ++   G  PNVVIYT+LI    +N
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
                A  + +++ E G+      Y  LI GL K     +   F  +M  NG+ P+ +TY
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 284 NC-----------------------------------LIHEYCNEGKVSEGFKLFDEMRH 308
                                                LI+EYC + KV E    +  M  
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVD 585

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           + +  +  TY  L+ GL K  +V +AE +  +M+  GI+P+V +Y  LI+GF   G   K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +F+++   G +P+V+ YN+L+  F ++G  + A +L+ EM  +G+ P+ VTY  +ID
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-------- 480
            + +S D+ +AF ++  M+  G  PD + Y  L+ G C   +++ A  +F +        
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765

Query: 481 --------MW-------ETKLE---------------PNDVVYNMMIFGYCKEGNSYRAL 510
                    W       E K E               PNDV YN+MI   CKEGN   A 
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M    L+P + +Y+S +    + G+  E   + ++ +  G++P   +Y+++  A
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 250/496 (50%), Gaps = 44/496 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I   L++     A+    +M + G+ P    +NSL+I + K+   D+   F  E 
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               ++ + +++G  I G  EA +   A + + ++ E G  PN V+ T LI+  CK   +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKV 573

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   +R + + G++    TYTVL+ GLFKN    D  E + +M+  G++P +++Y  L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +   G + +   +FDEM    +  NV+ YN L+ G C+   +++A+ LLD+M + G+
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
            PN +TY  +IDG+C +G+  +AFRLF+++K  G  P                       
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753

Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLV-REME---ERGITPSEVTYTILID 428
                      S   +N LI    K G +++ ++++ R M+   +R   P++VTY I+ID
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +  ++E A E++  MQ +   P V TY  L++G    G   E   +F+      +EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN-----IASYSSTIGVLCQDGKWPE 543
           + ++Y+++I  + KEG + +AL L+ +M  K  V +     I++  + +    + G+   
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933

Query: 544 AEVLLNQMLKLGLKPS 559
           AE ++  M++L   P 
Sbjct: 934 AEKVMENMVRLQYIPD 949



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 55/462 (11%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQL--FPSSSNPVTKSR---------LYESIID 114
           A++ +++++   +  ++FT  + +    +   F S+   V + R         L   +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
            + K     +A   +  M+D G+   + T+  L+  + K+   D     F E R K +  
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+S+G+LI G  + G++ KA  + +++ E G +PNV+IY  L+ G C++G+IE+AK L 
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL     TY  +I G  K+G   + F  +++M+L G+ P  + Y  L+   C  
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745

Query: 294 GKVSEGFKLF--------------------------------------DEMRHREVACNV 315
             V     +F                                      D    R    N 
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN +I  LCKE  ++ A+ L  QM+ A + P VITY  L++G+   G   + F +F++
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-----EERGITPSEVTYTILIDSF 430
             + G  P  + Y+V+I AF K G +  A  LV +M      + G   S  T   L+  F
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +  +ME A ++   M +  + PD  T   LI+  C+  N +
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF  L    C  G   KA  V+ ++ E  + P   +++S++          R    F   
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIV----------RCSQEFVGK 147

Query: 237 GELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
            + G++     + +L  G    G +++  F F   M L  V P L     L+       +
Sbjct: 148 SDDGVL-----FGILFDGYIAKGYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNR 201

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +   + ++  M  R V  +V TY+ LI   C+   VQ  + +L + +    +  +     
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL----- 256

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
                      D A +L   +   G  P   TY+VLI    K    + A  L+ EM+  G
Sbjct: 257 ---------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           ++    TY++LID  ++  + + A  +   M   G +   Y Y   I  +  +G M++A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF+ M  + L P    Y  +I GYC+E N  +   LL EM ++ +V +  +Y + +  +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           C  G    A  ++ +M+  G +P+V +Y  L +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 48/326 (14%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F +M++ G+ P    +N LL    +S   +K      E   K +  +  ++  +I G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +GDL +AF + ++++  G  P+  +YT+L+DGCC+  D+ERA  +F    + G  ++   
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAP 768

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGV-----SPSLYTYNCLIHEYCNEGKVSEGFKL 302
           +  LI  +FK G  +   E   ++ ++G       P+  TYN +I   C EG +    +L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID---- 358
           F +M++  +   V+TY +L+ G  K  R  E   + D+   AGI P+ I Y+ +I+    
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887

Query: 359 ------------------------------------GFCDAGETDKAFRLFNQLKSNGQS 382
                                               GF   GE + A ++   +      
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLV 408
           P   T   LI     + N ++ +D V
Sbjct: 948 PDSATVIELINESCISSNQRVEADAV 973


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 232/470 (49%), Gaps = 6/470 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVR---PRSNTFNSLLIFVIKSCSFDKGW-LFF 164
           Y +++        +++AL   H M D  VR   P   ++N+++         DK + LF 
Sbjct: 169 YNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL 228

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 +  +V ++ I+I G C+A  +++A  V  Q+ + G  PN+V YT LI G    G
Sbjct: 229 DMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG 288

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             +    + +++   GL     TY +L+  L K G   +  + ++ M   G+ P +  Y 
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG 348

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++H Y  +G +SE     D M    ++ N   +N + C   K+  + EA  + ++M+  
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+SPNV+ Y  LID  C  G  D A   FNQ+ + G +P++V +  L+         + A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L  EM  +GI P+ V +  ++ +      + KA  +  LM++ G  PD+ +Y  LI G
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C+ G   EASKL + M    L+PN+  YN ++ GYC++G    A  +  EM   G+ P 
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPV 588

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR--AKNN 572
           + +Y++ +  L +  ++ EA+ L   M+  G + S+  YNI+    +KNN
Sbjct: 589 VVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNN 638



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K+++ D+A   F QM+D GVRP   T+  L+   +    + +      E  
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMS 301

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D +++G+L+   C+ G   +A ++ + +   G  P+V IY  ++ G    G + 
Sbjct: 302 AHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS 361

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                   +   G+    + + ++ C   K  +  +  + + KM+  G+SP++  Y  LI
Sbjct: 362 EMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLI 421

Query: 288 HEYCNEGKV-----------SEGF------------------------KLFDEMRHREVA 312
              C  G+V           +EG                         +LF EM ++ + 
Sbjct: 422 DALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIH 481

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV +NT++C LC E RV +A+RL+D M+  G  P++I+YN LI G C  G+TD+A +L
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P+  TYN L+  + + G    A  + +EM   GITP  VTY  ++    +
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFK 601

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  SG    +YTY ++++GL     + EA K+F S+    L+ + + 
Sbjct: 602 TRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIIT 661

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI    K+G    A+ L   ++  GLVP++ +Y      L ++G   E + + ++M 
Sbjct: 662 FNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 722 KSGCAPNSLMLNFLVR 737



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 228/502 (45%), Gaps = 38/502 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+        D+A   F  M D G+ P   T+  ++  + K+   D+    F +  
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI 266

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  ++ ++  LI G    G   +   +L ++   G  P+   Y  L+D  CK G   
Sbjct: 267 DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  +   G+      Y +++ G    G   +   F + M  NG+SP+ Y +N + 
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +  +  + E   +F++MR + ++ NVV Y TLI  LCK  RV +AE   +QM   G++
Sbjct: 387 CAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446

Query: 348 PNVITYNKLIDG-----------------------------------FCDAGETDKAFRL 372
           PN++ +  L+ G                                    C  G   KA RL
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + ++  G  P +++YN LIR     G +  AS L+  M   G+ P+E TY  L+  + R
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ A+ ++  M  +G +P V TY  ++HGL       EA +L+ +M  +  + +   
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN+++ G  K      AL++   +  K L  +I +++  IG L +DG+  +A  L   + 
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686

Query: 553 KLGLKPSVSLYNILYRAKNNIE 574
             GL P V+ Y ++  A+N IE
Sbjct: 687 ANGLVPDVTTYRLI--AENLIE 706



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 214/472 (45%), Gaps = 75/472 (15%)

Query: 170 KVELDVYSFGILI------------------------------------KGCCEAGDLNK 193
           KV  DV+++ IL+                                    KG C+A  + +
Sbjct: 89  KVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGE 148

Query: 194 AFEV-LNQLEEMGFSPNVVIYTSLIDGCCK------------------------------ 222
           A  V L ++ E+G +PNVV Y +L+ G C                               
Sbjct: 149 AMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYN 208

Query: 223 --------NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
                    G +++A  LF  + + G+     TYT++I GL K  +       +++M   
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV P++ TY CLIH Y + G+  E  ++  EM    +  +  TY  L+  LCK+ +  EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +L D M   GI P+V  Y  ++ G+   G   +     + +  NG SP+   +N++  A
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F+K      A D+  +M ++G++P+ V Y  LID+  +   ++ A   ++ M   G +P+
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           +  +  L++GLC     ++A +LF  M    + PN V +N ++   C EG   +A RL+ 
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID 508

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            M   G  P+I SY++ I   C  GK  EA  LL+ ML +GLKP+   YN L
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 20/467 (4%)

Query: 107 RLYESIIDAHLKSRLS-----------DQALFYFHQMLD----SGVRPRSNTFNSLLIFV 151
           +L++S+I   +K  +S             AL   H  LD    +G+ P    FN +    
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K     +    F++ R + +  +V ++  LI   C+ G ++ A    NQ+   G +PN+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V++TSL+ G C     E+A  LF ++   G+      +  ++C L   G         + 
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+  G  P + +YN LI  +C  GK  E  KL D M    +  N  TYNTL+ G C++ R
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           + +A  +  +M   GI+P V+TYN ++ G        +A  L+  + ++G+  S+ TYN+
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++   SK      A  + + +  + +    +T+ I+I + ++    E A  +++ +  +G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PDV TY ++   L  +G+++E   +F+ M ++   PN ++ N ++      G+  RA 
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLC----QDGKWPEAEVLLNQMLK 553
             L +++EK      ++ S  I +      Q    PE    LN+  K
Sbjct: 750 AYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFLNEAKK 796



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 51/321 (15%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGL----------CKEMRVQEAERLLDQMKMAG 345
           V +  KLFDE  H     +++ +N L+  +            E+ V    R++     + 
Sbjct: 31  VDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDC-CSK 89

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFN------------------------------- 374
           ++P+V TY+ L+  FC  G  +  F  F                                
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 375 ------QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE---RGITPSEVTYTI 425
                 ++   G +P+VV+YN L++ F     ++ A +L+  M +   R   P+ V+Y  
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I+ F     ++KA+ ++  M   G  P+V TY ++I GLC    +  A  +F  M +  
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + PN V Y  +I GY   G     +R+L EM+  GL P+  +Y   +  LC+ GK  EA 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L + M++ G+KP VS+Y I+
Sbjct: 330 KLFDSMIRKGIKPDVSIYGII 350



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 53/275 (19%)

Query: 344 AGISPNVITYNKLIDGFCDAGE--TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +S   +   ++I     AG    D A +LF++   + +  S++ +N L+ A S A   
Sbjct: 7   TAVSDRCLELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRR 66

Query: 402 KMA----------SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
             +          + ++R+   + + P   TY+IL+  F R   +E  F  + L+ K+G+
Sbjct: 67  GSSSTSELVVSCFNRMIRDCCSK-VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGW 125

Query: 452 -------------------------------------SPDVYTYGVLIHGLCMKGNMKEA 474
                                                +P+V +Y  L+ G C +   +EA
Sbjct: 126 RVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEA 185

Query: 475 SKLFNSMWETKLE---PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +L + M + ++    PN V YN +I G+  EG   +A  L  +M ++G+ PN+ +Y+  
Sbjct: 186 LELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIV 245

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  LC+      AE +  QM+  G++P++  Y  L
Sbjct: 246 IDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 202/385 (52%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            LD  S+G LI G C+ G+   A E+L + +     P+VV+Y ++IDG CK+  +  A  
Sbjct: 295 HLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFD 354

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+ +     +     TY  LI G    G  KD  + + KM    + P +YT++ L+  +C
Sbjct: 355 LYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC 414

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G + E   +   M  + +  +VVTY++L+ G C    V +AE + + M   G++ NV 
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +I+GFC     D+A +LF ++      P V+TY+ LI    K+G    A +LV EM
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             RG  P  +TY  ++D+  +   ++KA  + + ++  G  PD+ TY +L+ GLC  G +
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A K+F  +       +   Y +MI G+C +G    AL LL +M E G +P+  +Y   
Sbjct: 595 EDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  L +  +   AE LL +M+  GL
Sbjct: 655 ILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 202/395 (51%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +    IKG C  G +++A    +++  MGF  + V Y +LI+G CK G+ + A  
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L R+     +      Y  +I G+ K+    D F+ Y +     + P ++TYN LI  +C
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC 379

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             GK+ +   LF++M  + +  +V T++ L+ G CK+  ++EA+ +L  M    I P+V+
Sbjct: 380 IVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVV 439

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY+ L+DG+C   E +KA  +FN +   G + +V +YN++I  F K      A  L +EM
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             + I P  +TY+ LID   +S  +  A E+   M   G  PD+ TY  ++  LC K ++
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A  L   +    + P+   Y +++ G C+ G    A ++  ++  KG   ++ +Y+  
Sbjct: 560 DKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVM 619

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I   C  G + EA  LL++M + G  P    Y I+
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 186/352 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+ DV  +  +I G C+   +N AF++ ++       P+V  Y +LI G C  G ++ A 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF K+    ++   +T+++L+ G  K+G  K+       M    + P + TY+ L+  Y
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +V++   +F+ M HR V  NV +YN +I G CK   V EA +L  +M    I P+V
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITY+ LIDG C +G    A  L +++   GQ P ++TYN ++ A  K  +   A  L+ +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++ +GI P   TYTIL+    +S  +E A +++  +   G++ DVY Y V+I G C KG 
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             EA  L + M E    P+   Y ++I    ++  +  A +LL EM  +GL+
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 8/403 (1%)

Query: 175 VYSFGILI---KGCCEAGDLNKAFEV-----LNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++SF ILI   K   +   L K+FE+       ++ + G+ P+ +  T+ I G C  G I
Sbjct: 220 LHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQI 279

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A     K+  +G    Q +Y  LI GL K G  K   E   +     V P +  YN +
Sbjct: 280 HQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTI 339

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C +  V++ F L+ E   + +  +V TYN LI G C   ++++A  L ++M    I
Sbjct: 340 IDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNI 399

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+V T++ L+DGFC  G   +A  +   +      P VVTY+ L+  +        A  
Sbjct: 400 IPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAES 459

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M  RG+T +  +Y I+I+ F +   +++A +++  M      PDV TY  LI GLC
Sbjct: 460 IFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLC 519

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +  A +L + M     +P+ + YN ++   CK+ +  +A+ LL ++  +G+ P++ 
Sbjct: 520 KSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMN 579

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  +  LCQ GK  +A  +   +L  G    V  Y ++ + 
Sbjct: 580 TYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 622



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 1/345 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID   K +  + A   + + +   + P   T+N+L+  F I     D   LF   
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  DVY+F IL+ G C+ G++ +A  VL  + +    P+VV Y+SL+DG C   ++
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A+ +F  +   G+ A   +Y ++I G  K  +  +  + +++M    + P + TY+ L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++S   +L DEM +R    +++TYN+++  LCK+  V +A  LL ++K  GI
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ TY  L+ G C +G+ + A ++F  L   G +  V  Y V+I+ F   G    A  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           L+ +MEE G  P   TY I+I S    D+ + A ++   M   G 
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 12/182 (6%)

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           H  Q+FP           Y S+ID   KS     AL    +M   G +P   T+NS+L  
Sbjct: 500 HHKQIFPDVIT-------YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 151 VIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           + K    DK     ++ + + +  D+ ++ IL+KG C++G L  A +V   L   G++ +
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           V  YT +I G C  G  + A  L  K+ E G +    TY ++I  LF    +KD  +  E
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF----EKDENDMAE 668

Query: 270 KM 271
           K+
Sbjct: 669 KL 670


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 215/427 (50%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L++   P   ++N+++    K+   D     F   R +    DV ++ I+I   C  G
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L  AFEV+++L + G  P+V+ YT LI+     G I  A  LF ++   GL    +TY 
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K G++    +F   +   G +P + +YN L+  + N+ +  +G +L  +M   
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               NVVT++ LI   C+E RV+EA  +L+ MK  G++P+  +Y+ LI  FC  G  D A
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                ++ S+G  P +V YN ++    K G + +A D+  +++E G  P+   Y  +  +
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                +  KA EM S M + G  PD  TY  LI  LC  G + EA  L   M  T+ +P 
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPT 480

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N+++ G CK    +  + LL  M EKG +PN  SY   I  +   G   EA  L N
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELAN 540

Query: 550 QMLKLGL 556
            + +LG+
Sbjct: 541 SLYRLGV 547



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 36/389 (9%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+   C AG  N++   L  +   GF P+VV+ T LI G   + ++++A  +   +   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                                                P +Y+YN +I  +    ++    
Sbjct: 128 ------------------------------------DPDVYSYNAMISGFSKANQIDSAN 151

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++FD MR R  + +VVTYN +I  LC   +++ A  ++D++   G  P+VITY  LI+  
Sbjct: 152 QVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEAT 211

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  ++A  LF++L S G  P + TYN +IR   K G    A D VR +  RG  P  
Sbjct: 212 ILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDV 271

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+Y IL+ SF+     E    +   M  SG  P+V T+ +LI   C +G ++EA  +   
Sbjct: 272 VSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEV 331

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  L P+   Y+ +I  +CKEG    A+  L +M   G +P+I +Y++ +  LC+ G 
Sbjct: 332 MKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGC 391

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              A  +  ++ ++G  P+V  YN ++ A
Sbjct: 392 ADLALDVFEKLDEVGCPPTVRAYNTMFSA 420



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 215/471 (45%), Gaps = 26/471 (5%)

Query: 78  ITSSSFTPRSLLC-HLTQLFPSSSNPVTKSRL--------------YESIIDAHLKSRLS 122
           + S  F P  +LC  L + F +S N     R+              Y ++I    K+   
Sbjct: 88  VVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQI 147

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS------ENRCKVELDVY 176
           D A   F +M   G  P   T+N   I +   CS  K  L F       ++ CK    V 
Sbjct: 148 DSANQVFDRMRSRGFSPDVVTYN---IMIGSLCSRGKLELAFEVMDELLKDGCKPS--VI 202

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++ ILI+     G +N+A E+ ++L   G  P++  Y ++I G CK G  +RA    R +
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G      +Y +L+         +DG    + M L+G  P++ T++ LI  +C EG+V
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   + + M+ + +  +  +Y+ LI   CKE R+  A   L++M   G  P+++ YN +
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +   C  G  D A  +F +L   G  P+V  YN +  A    GN   A +++ EM  +GI
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P E+TY  LI    R   +++A  +   M+ + F P V ++ +++ G+C    + E  +
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIE 502

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           L  +M E    PN+  Y ++I G    G    A+ L   +   G++   +S
Sbjct: 503 LLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 200/391 (51%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F ILI G  +AG L +A  +  +    G + ++  YT+++D   KN  I+ A  L  KI
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G   T  TY  L+ GL K G  ++  +   K+  NG +P + TY  LI     + + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E +KLF EM  R +A + V Y  LI GL +  ++ +A  +   M   G  P+V+T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG C AG    A R+F  +++ G +P+ V Y+ LI    KA     A +++ +M++   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP  +TY ILID   +S D+  A   +  M ++G  PDVYTY +LI G C  GN   A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F+ M  ++  PN V Y  +I G CK     +A      M E+G  P+   YSS +  LC
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           + GK     +L ++M + G+  S +   +++
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANSQTRTRLIF 391



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 219/446 (49%), Gaps = 7/446 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FS 165
           +  +I+  +K+ +  QA     +   +G     +T+ +++ ++ K+    +        +
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N C   +  Y+   L+ G C+ G L +A ++L ++ + G +P+VV YTSLIDG  K   
Sbjct: 62  ANGCTPTIATYN--ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  LF+++   GL      YT LI GL + G        Y+ M   G  P + T + 
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I   C  G++    ++F  M  R +A N V Y+ LI GLCK  ++  A  +L QMK A 
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +P+ ITYN LIDG C +G+   A   F+++   G  P V TYN+LI  F KAGN+  A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +  +M     +P+ VTY  LI    +   + KA   Y  M++ G  PD + Y  L+ GL
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G ++    LF+ M  + +  N      +IF  CK      A+ L   + ++G+ P+ 
Sbjct: 360 CKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHP 417

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +Y+S I  L + GK  E + +  +M
Sbjct: 418 YAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 200/405 (49%), Gaps = 4/405 (0%)

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           + N C +  D++++  ++    +   + +A  ++ ++   G +P +  Y +L++G CK G
Sbjct: 26  TTNGCTI--DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMG 83

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L RKI + G      TYT LI GL K     + ++ +++M   G++     Y 
Sbjct: 84  RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYT 143

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI      GK+ +   ++  M  +    +VVT +T+I GLCK  R+  A R+   M+  
Sbjct: 144 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 203

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN + Y+ LI G C A + D A  +  Q+K    +P  +TYN+LI    K+G+   A
Sbjct: 204 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAA 263

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                EM E G  P   TY ILI  F ++ + + A  ++  M  S  SP+V TYG LI G
Sbjct: 264 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISG 323

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC +  + +AS  +  M E    P+  VY+ ++ G CK G       L  EM   G V N
Sbjct: 324 LCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VAN 382

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             + +  I  LC+  +  EA  L N + K G+ P    YN +  A
Sbjct: 383 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISA 426



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 7/237 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y ++I    K+R  D AL    QM  +   P + T+N L+  + KS        FF   
Sbjct: 211 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEM 270

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  CK   DVY++ ILI G C+AG+ + A  V + +     SPNVV Y +LI G CK  
Sbjct: 271 LEAGCKP--DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            + +A + ++ + E G       Y+ L+ GL K+G  + G   +++M+ +GV+ S  T  
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRT 387

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            LI   C   +V E   LF+ +R +E   +   YN++I  L K  +V E + +  +M
Sbjct: 388 RLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%)

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T++ILI+  V++  + +A  +      +G + D++TY  ++  L     ++EA  L   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P    YN ++ G CK G    A+ LL ++ + G  P++ +Y+S I  L +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            EA  L  +M   GL      Y  L R 
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRG 148


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 234/465 (50%), Gaps = 6/465 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++++A  K+     A  +  ++L  G    ++   SL++   +     + +  F    
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C+     YS  ILI G CEAG L +AF++  ++ E G  P+   YT LI   C  G
Sbjct: 234 KEENCRPNSVTYS--ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 291

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ++A  +  ++     V   HTYT+LI  L + G  ++    + KM  +G+ P + T+N
Sbjct: 292 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 351

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC EG V   F+L   M       N+ TYN L+ GLC+  +  +A  LL ++   
Sbjct: 352 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 411

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+ +TYN L+DGFC  G+ + AF +FN + S G  P   T+  LI    K G  + A
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + ++  M ++GI+  EVT+T LID   +    +    ++  M ++      +T+   +  
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L     + EA+ +   M +  L P+ V + ++I G+C+ G +  +L++L  M + G  PN
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +Y+  I  LC +G+  EAE +L  M   G+ P+   Y +L +A
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 636



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 5/433 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N VT S L   + +A    RL ++A     +M++ G +P + T+  L+         DK 
Sbjct: 241 NSVTYSILIHGLCEA---GRL-EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296

Query: 161 WLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
                E   K  + +V+++ ILI   C  G + +A  V  ++ + G  P ++ + +LI+G
Sbjct: 297 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 356

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G +  A  L   + +        TY  L+ GL +       F    ++  NG+ P 
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 416

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             TYN L+  +C EG+++  F +F+ M    +  +  T+  LI GLCK  R+++A  +L 
Sbjct: 417 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 476

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M   GIS + +T+  LIDG C  G+      LF  +  N    +  T+N  + A  K  
Sbjct: 477 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 536

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A+ ++ +M + G+ PS VT+TILI+   R+ +   + +M   M+++G SP+VYTY 
Sbjct: 537 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 596

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++I+GLC  G ++EA  +  SM    + PN   Y +++  + K G   RA +++  M + 
Sbjct: 597 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 656

Query: 520 GLVPNIASYSSTI 532
           G  PN   YS+ +
Sbjct: 657 GCQPNSHIYSALL 669



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 5/450 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           R Y  +++   +   S +A     +++D+G+ P   T+N L+    K    +  + +F S
Sbjct: 383 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 442

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N   +E D ++F  LI G C+ G L +A  +L  + + G S + V +T+LIDG CK G 
Sbjct: 443 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 502

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +    LF  + E   + T HT+   +  L K+    +      KM   G+ PS+ T+  
Sbjct: 503 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 562

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C  G+ +   K+ + M+    + NV TY  +I GLC   RV+EAE +L  M   G
Sbjct: 563 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 622

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +SPN  TY  L+     AG  D+AF++ + +  NG  P+   Y+ L+  F  +  +  A 
Sbjct: 623 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 682

Query: 406 DL--VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            L    +++ R ++  E     L     R  D++ A ++   ++K G  P    Y  L+ 
Sbjct: 683 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVV 741

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC +G + EA +L   M +  L P+  + ++ I  YCK       L  +  + +   VP
Sbjct: 742 GLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVP 800

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + ASY   I  L  +G+  EA+ L++ +++
Sbjct: 801 SFASYCWVIHGLRNEGRVQEAQKLVSDLVR 830



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 227/483 (46%), Gaps = 36/483 (7%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V     Y  +ID   +    ++A   F +ML  G+ P   TFN+L+    K     +GW+
Sbjct: 309 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK-----EGWV 363

Query: 163 F--------FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
                      +  CK  +  Y+   L++G C      KAF +L ++ + G  P+ V Y 
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNE--LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 421

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            L+DG CK G +  A  +F  +   GL     T+T LI GL K G  +        M   
Sbjct: 422 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+S    T+  LI  +C  GK  +   LF+ M          T+N  +  L K+ ++ EA
Sbjct: 482 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEA 541

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             +L +M   G+ P+V+T+  LI+G C AGET  + ++  ++K  G SP+V TY ++I  
Sbjct: 542 NAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING 601

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
               G  + A  ++  M   G++P+  TY +L+ + V++  +++AF++ S M K+G  P+
Sbjct: 602 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 661

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKL-----EPNDVVYNMMIFGYCKEGNSYR- 508
            + Y  L+ G  +  N    ++  +S  +        E ND          C   + +R 
Sbjct: 662 SHIYSALLSGFVLS-NTAIGARALSSTGDLDARSLSSEEND--------NNCLSSHVFRL 712

Query: 509 -----ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                AL++  E+ + G VP    Y+  +  LC++G+  EA+ L   M+K GL P  ++ 
Sbjct: 713 MDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAIS 771

Query: 564 NIL 566
           +I+
Sbjct: 772 SII 774



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            F ++  M +       + Y T++  LCK   VQ AE    ++   G   +      L+ 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 359 GFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             C   +  +AFR+F ++ K     P+ VTY++LI    +AG  + A  L +EM E+G  
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS  TYT+LI +       +KA +M   M      P+V+TY +LI  LC +G ++EA+ +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M +  L P  + +N +I GYCKEG    A +LL  M +    PNI +Y+  +  LC+
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             K  +A +LL +++  GL P    YNIL
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G   S   Y+ L+    + +    AF +Y  M   GF      Y  +++ LC  G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPNIASYS 529
           ++ A      +       +  V   ++   C+  +   A R+  +M+ E+   PN  +YS
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 246

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             I  LC+ G+  EA  L  +M++ G +PS   Y +L +AK +I
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 7/527 (1%)

Query: 20  MAKLPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           ++ L P  A + F W +R+ G +HT  S + +L+LL  + +  ++     L+L +IS   
Sbjct: 61  VSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANY---DKLVLSMISCSG 117

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           T+             +        V   + Y   + + L+  +++     +  ++  G+ 
Sbjct: 118 TAEDVREAVDAIQAIRRV-GGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLL 176

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P + T+N++++   K  S      +F   R   +++D Y+   L+ G C   DL KA  +
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  +  MG   N   YT LI G  +   +  A +L   + + G     H YT+LI GL K
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G   D     ++M L GV PS++TYN +I  YC  G++ +   +   M       +  T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN+LI GLC   ++ EAE LL+     G +P VIT+  LI+G+C A   D A R+ + + 
Sbjct: 357 YNSLIYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S+     +  Y VLI    K    K A + + EM   G+ P+ V YT +ID + +   + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A E++ LM+  G  P+ +TYG LI+GL     + +A  L   M E  + P  + Y  +I
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLI 535

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            G CK+     A RL   M + GL P+  +Y+     LC+ G+  EA
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA 582



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 225/493 (45%), Gaps = 24/493 (4%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++F +   P     +Y SIID + K  +   AL  F  M   G  P + T+ SL+  +
Sbjct: 446 LNEMFANGLAP--NVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           I+     K     ++     +   V ++  LI+G C+  + + AF +   +E+ G +P+ 
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDE 563

Query: 211 VIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
             Y  L D  CK+G  E A   L RK    G+V T+ TYT L+ G  K G         E
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           KM   G    LYTY+ L+   C + K++E   + D+M    V CN+V Y  +I  + KE 
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +   A+ L ++M  +G  P+  TY   I  +C  G+ ++A  L  +++ +G +P VVTY+
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYH 739

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD--------------- 434
           + I      G    A   ++ M +    P+  TY +L+  F++                 
Sbjct: 740 IFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNW 799

Query: 435 -DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++   +++   M K G +P V TY  +I G C    ++EA  L + M    + PN+ +Y
Sbjct: 800 IELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIY 859

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            M+I   C      + +  + +M E G  P + SY   I  LC +G +  A+ L   +L 
Sbjct: 860 TMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 554 LGLKPSVSLYNIL 566
           +    +   + IL
Sbjct: 920 MDYNHNEVAWKIL 932



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 211/468 (45%), Gaps = 38/468 (8%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
           GV P   T+N+++    KS              +N C    D +++  LI G C  G L+
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNP--DDWTYNSLIYGLC-GGKLD 370

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A E+LN     GF+P V+ +T+LI+G CK   I+ A  +   +           Y VLI
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K    K+  E   +M  NG++P++  Y  +I  YC  G V    ++F  M H    
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N  TY +LI GL ++ ++ +A  L+ +M+  GI+P VI Y  LI G C   E D AFRL
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRL 550

Query: 373 FNQLKSNGQSP--------------------------------SVVTYNVLIRAFSKAGN 400
           F  ++ NG +P                                + VTY  L+  FSKAGN
Sbjct: 551 FEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           +  A+ L+ +M   G      TY++L+ +  +   + +A  +   M  SG   ++  Y +
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I  +  +G    A  LFN M  +  +P+   Y + I  YCK G    A  L+GEM   G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           + P++ +Y   I      G    A   L +M+    +P+   Y +L +
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLK 778



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 228/520 (43%), Gaps = 60/520 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y S+I      +L D+A    +  +  G  P   TF +L+    K+   D      S   
Sbjct: 357 YNSLIYGLCGGKL-DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + CK  LD+ ++G+LI    +   L +A E LN++   G +PNVVIYTS+IDG CK G 
Sbjct: 416 SSNCK--LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  +F+ +   G      TY  LI GL ++           KMQ +G++P +  Y  
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C + +    F+LF+ M    +  +   YN L   LCK  R +EA   L +    G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KG 590

Query: 346 ISPNVITYNKLIDGFCDAGETD-----------------------------------KAF 370
           +    +TY  L+DGF  AG TD                                   +A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            + +Q+  +G   ++V Y ++I    K G    A  L  EM   G  PS  TYT+ I S+
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +E+A  +   M++ G +PDV TY + I+G    G M  A      M +   EPN 
Sbjct: 711 CKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNC 770

Query: 491 VVYNMMIFGYCKEG--NSY--------------RALRLLGEMNEKGLVPNIASYSSTIGV 534
             Y +++  + K    N++                 +LL  M + GL P + +YSS I  
Sbjct: 771 WTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAG 830

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            C+  +  EA VLL+ ML   + P+  +Y +L +   +I+
Sbjct: 831 FCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 183/375 (48%), Gaps = 1/375 (0%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++ + L + G  P+ V Y ++I   CK G +  A   F  + E G+    +T   L+ G 
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            +    +        M L G   + Y+Y  LI        V E   L   M     + N+
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             Y  LI GLCKE R+ +A  LLD+M + G+ P+V TYN +IDG+C +G    A  +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++ NG +P   TYN LI      G    A +L+     RG TP+ +T+T LI+ + +++ 
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A  + S M  S    D+  YGVLI+ L  K  +KEA +  N M+   L PN V+Y  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I GYCK G    AL +   M  +G  PN  +Y S I  L QD K  +A  L+ +M + G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 556 LKPSVSLYNILYRAK 570
           + P V  Y  L + +
Sbjct: 524 ITPGVIAYTTLIQGQ 538



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 180/427 (42%), Gaps = 26/427 (6%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK-IISGRITSSS---- 82
           AF LF    + GL    Q+ +++   L    S  +  A   L+ K ++  ++T +S    
Sbjct: 547 AFRLFEMMEKNGLTPDEQAYNVLTDALCK--SGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           F+          L     N   K+ LY    ++ A  K +  ++AL    QM  SGV+  
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              +  ++  +IK    D     F+E      +    ++ + I   C+ G + +A  ++ 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++E  G +P+VV Y   I+GC   G ++RA    +++ +        TY +L+    K  
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 260 LQKDGF----------------EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           L    +                +  E+M  +G++P++ TY+ +I  +C   ++ E   L 
Sbjct: 785 LINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  + ++ N   Y  LI   C      +    +  M   G  P + +Y+ LI G CD 
Sbjct: 845 DHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D+A  LF  L     + + V + +L     KAG+    S L+  M+ R       +Y
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 424 TILIDSF 430
           ++L DS 
Sbjct: 965 SMLTDSI 971



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 17/370 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+  +D A     +M++ G +    T++ LL  + K    ++      +  
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V+ ++ ++ I+I    + G  + A  + N++   G  P+   YT  I   CK G IE
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIE 717

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  ++   G+     TY + I G    G     F   ++M      P+ +TY  L+
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 288 HEYC----------------NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +                 N  +++  ++L + M    +   VVTY+++I G CK  R+
Sbjct: 778 KHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRL 837

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           +EA  LLD M    ISPN   Y  LI   CD     K       +   G  P + +Y+ L
Sbjct: 838 EEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYL 897

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I      G+   A  L  ++       +EV + IL D  +++  ++   ++ + M     
Sbjct: 898 IVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHC 957

Query: 452 SPDVYTYGVL 461
             D  +Y +L
Sbjct: 958 RIDSESYSML 967



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 7/241 (2%)

Query: 331 VQEAERLLDQMKMAG-----ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           V+EA   +  ++  G     +SP    YN  +        T+   +L++ L   G  P  
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKC--YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDT 179

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN +I A+ K G+  +A      + E G+     T   L+  + R+ D+ KA  +  +
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G   + Y+Y +LI GL     ++EA  L   M +     N  +Y ++I G CKEG 
Sbjct: 240 MPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGR 299

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
            + A  LL EM  +G+VP++ +Y++ I   C+ G+  +A  +   M + G  P    YN 
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359

Query: 566 L 566
           L
Sbjct: 360 L 360



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 111/307 (36%), Gaps = 52/307 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  II   +K    D A   F++M+ SG +P + T+   +    K    ++      E  
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 727

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ--------------------------- 200
           R  V  DV ++ I I GC   G +++AF  L +                           
Sbjct: 728 RDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787

Query: 201 ---------------------LEEM---GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
                                LE M   G +P VV Y+S+I G CK   +E A +L   +
Sbjct: 788 AHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +   +  YT+LI       L      F   M   G  P L +Y+ LI   C+EG  
Sbjct: 848 LGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDY 907

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                LF ++   +   N V +  L  GL K   V    +LL  M       +  +Y+ L
Sbjct: 908 DRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967

Query: 357 IDGFCDA 363
            D   +A
Sbjct: 968 TDSIREA 974



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 40/232 (17%)

Query: 375 QLKSNGQSPSVVTYNVL--IRAFSKAGNSKMASDLVREMEERG---ITPSEVTYTILIDS 429
           QL +  ++P+     VL  I     A + + A D ++ +   G   +  S   Y + + S
Sbjct: 94  QLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRS 153

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +R D  E   ++YS + + G  PD  TY  +I   C KG++  A + F  + E+ ++ +
Sbjct: 154 LLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMD 213

Query: 490 DVVYNMMIFGYCKEG-------------------NSY----------------RALRLLG 514
               N ++ GYC+                     N Y                 AL L+ 
Sbjct: 214 TYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVF 273

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            M + G   N+  Y+  I  LC++G+  +A  LL++M   G+ PSV  YN +
Sbjct: 274 MMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 197/389 (50%), Gaps = 1/389 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  D  SF  L+ GCC+ G   +A  +L  +   GFS +    T ++   C+ G      
Sbjct: 177 VRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVP 236

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++ E+G       YT  + GL K G  K  F   E+M   G+ P++YT+  LI   
Sbjct: 237 GLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 291 CNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           C  G     F+LF ++ +      NV TY  +I G CKE ++  AE LL +M   G++PN
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             TY  LIDG C  G  D+AF L N++K  G  P++ TYN +I  F K G  + A  ++R
Sbjct: 357 TNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
               +G+ P +VTYT+LI    +   +  A ++++ M ++   PD+ TY  +I   C + 
Sbjct: 417 MATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQR 476

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M+++ +LF+      L P    Y  MI GYC+ G S  AL++   M + G +P+  +Y 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYG 536

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           + I  LC++ +  EA  L   ML   + P
Sbjct: 537 ALISGLCKESRLEEARALFETMLDKHMVP 565



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 202/421 (47%), Gaps = 37/421 (8%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           GVRP + +F +L++   +   F++   L  +  R    LD  +  ++++  C  G     
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +  ++ EMG  PNVV YT+ +DG CK G +++A  +  ++   GL    +T+T LI G
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 255 LFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           L K G  +  F  + K+ + +   P+++TY  +I  YC EGK++    L   M  + +A 
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N  TY TLI G C+      A  L+++MK+ G  PN+ TYN +I GFC  G+  +A+++ 
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER------------------- 414
               S G  P  VTY +LI    K G+   A DL  +M E                    
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475

Query: 415 ----------------GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                           G+ P++ TYT +I  + R      A +++  M + G  PD  TY
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITY 535

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
           G LI GLC +  ++EA  LF +M +  + P DV    + + YC+   +  A+  L  +++
Sbjct: 536 GALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDK 595

Query: 519 K 519
           +
Sbjct: 596 R 596



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 181/365 (49%), Gaps = 36/365 (9%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            + MG  P+   + +L+ GCC+ G  E A                     L+  +++ G 
Sbjct: 172 FDGMGVRPDARSFRALVLGCCQEGRFEEAD-------------------ALLAAMWREGF 212

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             D                  T   ++  +C +G+  +   LF  M       NVV Y  
Sbjct: 213 SLDS----------------ATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTA 256

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSN 379
            + GLCK   V++A  +L++M   G+ PNV T+  LIDG C  G T++AFRLF +L KS+
Sbjct: 257 WVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSS 316

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
              P+V TY V+I  + K G    A  L+  M E+G+ P+  TYT LID   R    ++A
Sbjct: 317 SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRA 376

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           FE+ + M+  GF P++YTY  +I G C KG +++A K+        L P+ V Y M+I  
Sbjct: 377 FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITE 436

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +CK+G+   AL L  +M E    P+I +Y++ I + CQ  +  +++ L ++ L +GL P+
Sbjct: 437 HCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPT 496

Query: 560 VSLYN 564
              Y 
Sbjct: 497 KQTYT 501



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 170/374 (45%), Gaps = 12/374 (3%)

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           +T R+    L  +  SS  P   +  Y  +I  + K     +A     +M++ G+ P +N
Sbjct: 301 WTERAFRLFLKLVKSSSYKPNVHT--YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLN 199
           T+ +L+    +  SFD+ +     N+ K+E    ++Y++  +I G C+ G + +A++VL 
Sbjct: 359 TYTTLIDGHCRGGSFDRAFELM--NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
                G  P+ V YT LI   CK G I  A  LF ++ E        TYT +I    +  
Sbjct: 417 MATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQR 476

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             +   + ++K    G+ P+  TY  +I  YC  GK +   K+F+ M       + +TY 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYG 536

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            LI GLCKE R++EA  L + M    + P  +T   L   +C   +T  A    + L   
Sbjct: 537 ALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKR 596

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
            Q+ +    + L+R  S   N   AS  ++ + ++       TYT  I+S   S+    A
Sbjct: 597 QQAHAA---DALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALA 653

Query: 440 FEMYSLMQK--SGF 451
            E+   + K  SGF
Sbjct: 654 SEISEKISKRISGF 667


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 251/519 (48%), Gaps = 22/519 (4%)

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
           SH+   +++L    I G I+S +   R       Q  PS+   V  ++L  SI      S
Sbjct: 28  SHNRFHSKSLHFNTIDGAISSFNRMLR------MQPPPST---VDFNKLLTSIAKMKHHS 78

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DV 175
            L    L   HQM   G+ P   T +   I +   C  ++    FS     ++L    D 
Sbjct: 79  TL----LSLSHQMDSFGIPPNIYTLH---ILINSFCHLNRVGFAFSVLAKILKLGHQPDT 131

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            +F  LI+G    G + +A  + +++   GF P+VV Y +LI+G CK G+   A  L   
Sbjct: 132 ATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +         Y  +I  L K+    + F  + +M   G+SP ++TYN LIH  CN  +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
                 L +EM   ++  +VV++NT++  LCKE +V EA  ++D+M   G+ PNV+TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+DG C   E D+A ++F+ +   G  P+V++YN LI  + K      A  L  EM  + 
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  VTY+ LI      + ++ A  ++  M      P++ TY +L+  LC    + EA 
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L  ++  + L+P+  V N+ I G C+ G    A  L   ++ KGL P++ +YS  I  L
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
           C+ G   EA  L  +M + G   +  +YN + R   +NN
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 530



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 212/417 (50%), Gaps = 1/417 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           +AL  F +M+  G RP   T+ +L+  + K  +      L  S  +   + +V+++  +I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C+   + +AF + +++   G SP++  Y SLI   C   + +    L  ++ +  ++
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               ++  ++  L K G   +  +  +KM   GV P++ TY  L+  +C   ++ E  K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FD M  +    NV++YNTLI G CK  R+ +A  L  +M    + P+ +TY+ LI G C 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
                 A  LF+++ +  Q P++VTY +L+    K      A  L++ +E   + P    
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
             I ID   R+ ++E A +++S +   G  PDV+TY ++I+GLC +G + EASKLF  M 
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           E     N  +YN +  G+ +   + RA++LL EM  +G   + ++ +  + +L  DG
Sbjct: 509 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 110/207 (53%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +N L+ + +K  +      L  +M+  GI P+  T  IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF   + +  AF + + + K G  PD  T+  LI G+ ++G + EA  LF+ M     
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ V Y  +I G CK GN+  A+RLLG M +K   PN+ +Y++ I  LC+D +  EA  
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ P +  YN L  A  N+
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNL 249


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 239/498 (47%), Gaps = 35/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+   D A   F +M   G+ P   T+  L+  + K    +     F + R
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +++ VY +  LI G C+ G L++A  +L+ + + G +P    Y+ LI G C+NGD+ 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L R++ E G+    +T+T LI G  K+    +    ++KM  + V P+  T+N +I
Sbjct: 461 SAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G + + F+L+D+M    +  +  TY +LI GLC    V +A   +  ++ +   
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N  +   L+ G    G   + + L++++   G    +V++ +++ A  K  + + +  L
Sbjct: 581 LNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL 640

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM+E+G+ P ++ YT +ID+  + ++M +A   +  M   G+SP+  T+ VLI+ LC 
Sbjct: 641 FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCK 700

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVY---------------------------------- 493
            G +  A  L   M    + PN   Y                                  
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF 760

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G CK G    A+ L+ ++ E G  P+  SYS+ I  LC+ G   +A  L N+ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 554 LGLKPSVSLYNILYRAKN 571
            GLKP V  YNI  R  N
Sbjct: 821 KGLKPDVVAYNIFIRWCN 838



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 227/443 (51%), Gaps = 3/443 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILIKGCC 186
           F +ML SGV      + + +    +S + D  +G +   E+   V+     + +L+ G C
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE-GVKASAVPYNVLMYGLC 244

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           +   + +A EV N +  +G + + V Y +L+ G C+  ++E A  +   +  LG V ++ 
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
             + +I  L K  L ++ F    K+   G+ P+++ YN LI + C   +  +  +LF EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             R +  N VTY  LI  LCK   +++A  L D+M+  GI   V  YN LI+G+C  G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L + +   G +P+  +Y+ LI    + G+   A +L REM ERGI  +  T+T L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTAL 484

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ F +   M++A  ++  M  S   P+  T+ V+I G C+ GN+++A +L++ M E  L
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P++  Y  +I G C      +A   + ++     V N  S ++ +  L ++G++ E   
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYH 604

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L ++M   G+K  +  + I+  A
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYA 627



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 35/409 (8%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +AF +  +L ++G  PNV  Y +LID  CKN   + A  LF+++   GL   + TY +
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK-----------VSEG 299
           LI  L K G+ +D    ++KM+  G+  ++Y YN LI+ YC +G            V EG
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438

Query: 300 F------------------------KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                                    +L  EM  R +A N  T+  LI G CK+ ++ EA 
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL D+M  + + PN +T+N +I+G+C  G   KAF+L++Q+   G  P   TY  LI   
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
                   A++ V ++E      +  + T L+    R     + + ++  M   G   D+
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDL 618

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            ++ ++++    + + +++  LF  M E  ++P+D+ Y  MI    KE N  +AL    +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           M   G  PN  +++  I  LC+ G    AE+L  +ML   + P+   YN
Sbjct: 679 MVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 219/465 (47%), Gaps = 5/465 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A+ +SR  D A     +M   GV+  +  +N L+  + K+    +      +N
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA--VEVKN 257

Query: 168 ---RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 V  D  ++  L+ G C   +L  A  + + +  +GF P+    + +ID   K  
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKE 317

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  L  K+G+LG+V     Y  LI  L KN    D    +++M   G+ P+  TY 
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G + +   LFD+MR + +   V  YN+LI G CK+  +  A  LL  M   
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P   +Y+ LI G C  G+   A  L  ++   G + +  T+  LI  F K      A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + L  +M +  + P+EVT+ ++I+ +    ++ KAF++Y  M + G  PD YTY  LI G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+   + +A++    +  +    N+     +++G  +EG       L  EM  +G+  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + S++  +    +     ++ VL  +M + G+KP    Y  +  A
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 184/426 (43%), Gaps = 70/426 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+   K +  D+A   F +M+DS V P   TFN                       
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN----------------------- 517

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                      ++I+G C  G++ KAF++ +Q+ EMG  P+   Y SLI G C    + +
Sbjct: 518 -----------VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--------------- 273
           A      +     V    + T L+ GLF+ G   + +  +++M +               
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 274 --------------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                GV P    Y C+I     E  + +    +D+M     + 
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSP 686

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N VT+  LI  LCK   +  AE L  +M    + PN  TYN  +D F   G+ +KA  L 
Sbjct: 687 NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 746

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           + +   G   S+V++N+LI+   KAG  + A DL+R++ E G +P  ++Y+ +I    + 
Sbjct: 747 SAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKM 805

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+ KAFE+++ M   G  PDV  Y + I    + G   +A  ++ +M  + ++PN   Y
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 494 NMMIFG 499
             ++ G
Sbjct: 866 RALLSG 871



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 203/451 (45%), Gaps = 12/451 (2%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLL------SKMSSHSHAAAQTLILKIISGRITS 80
           +A  L +   ++GL  T  S S ++  L       S M  H   A + +     +     
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485

Query: 81  SSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           + F     +    +LF     SN +     +  +I+ +       +A   + QM++ G++
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           P + T+ SL+  +  +    K   F +  EN   V L+ +S   L+ G    G   + + 
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV-LNNFSLTALLYGLFREGRFTETYH 604

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           + +++   G   ++V +T ++    K  D E++ +LFR++ E G+      YT +I  L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K          +++M ++G SP+  T+  LI+  C  G +     L  EM    V  N  
Sbjct: 665 KEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYN  +     E  +++A+ L   M + G   +++++N LI G C AG+  +A  L  ++
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKI 783

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             +G SP  ++Y+ +I    K G+   A +L  EM  +G+ P  V Y I I       + 
Sbjct: 784 TESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGES 843

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +KA  +Y+ M +SG  P+  TY  L+ G+ +
Sbjct: 844 DKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 242/477 (50%), Gaps = 15/477 (3%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SNP      +  ++    K +   Q  + ++QM  SG+ P   T N LL  +       +
Sbjct: 90  SNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGE 149

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           G    +   R     D+ ++  LIKG C    ++KA  +  +++++G +PN + Y +L+ 
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209

Query: 219 GCCKNGDIERAKMLFRKIGE------LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           G C+ G+I  A  L +++        +       +Y+++I  L K+  + +  + +E+M+
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           + G++P++ +Y  L+ E        E  +LF+EM ++ V  NVVT+N LI  LCKE +V 
Sbjct: 270 VQGMTPTVISYTSLMWE--------EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 321

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA+ LL+ M   GI PN++TYN LI+GFC  G+ + A  LF  + S G  P V+ Y VLI
Sbjct: 322 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 381

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             + K    + A  L   M + G  P   TY  L+    +   +  A +++ +M+  G  
Sbjct: 382 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIP 441

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D+Y YG+ ++GLC  G + EA +LFN +    ++ +   +N +I G CK G    A  L
Sbjct: 442 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 501

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++ ++ L P++ +Y+  I   C+ G+  +A +L  +M K G  P    Y  L R 
Sbjct: 502 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 183/364 (50%), Gaps = 11/364 (3%)

Query: 93  TQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI 152
           + L+  +  PV  S  Y  IIDA  K R  D+A   F +M   G+ P   ++ SL+    
Sbjct: 231 SSLYGINFKPVVIS--YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM---- 284

Query: 153 KSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
               +++    F+E   + V+ +V +F +LI   C+ G + +A ++L  + + G  PN++
Sbjct: 285 ----WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 340

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y SLI+G C  GD+  A+ LF  +   G       YTVLI G  K    ++  + Y  M
Sbjct: 341 TYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 400

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
              G  P + TY  L+      GKV +  KLF  M+   +  ++  Y   + GLCK   +
Sbjct: 401 LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCL 460

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA  L +++K   I  ++  +N LIDG C AG+ + A+ LF +L      P VVTYN++
Sbjct: 461 FEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIM 520

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F + G    A+ L ++ME+ G TP ++TY  LI  F  S  +EK  E+  +M +   
Sbjct: 521 IHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 580

Query: 452 SPDV 455
           S DV
Sbjct: 581 SLDV 584



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 188/389 (48%), Gaps = 16/389 (4%)

Query: 186 CEAGDLN--KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           C+ G++   +AF+  + +     +P +  +T L+ G  K     +   L+ ++   G+  
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T  +L+  L       +G      +   G  P + TY  LI   C E ++S+   LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----KMAGIS--PNVITYNKLI 357
             M+      N +TY TL+ GLC+   +  A +L  +M     + GI+  P VI+Y+ +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           D  C     D+A  LF ++K  G +P+V++Y  L+         + A  L  EM  +G+ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQ 301

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ VT+ +LID   +   + +A ++  +M + G  P++ TY  LI G C+ G++  A +L
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F SM     EP+ + Y ++I GYCK      A++L   M + G  P++ +Y + +  L Q
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            GK  +A+ L   M   G+   + +Y I 
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIF 450



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 65/132 (49%)

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +AF+ + LM  S  +P + ++  L+ GL    +  +   L+N M  + + P+    N+++
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              C        L ++  +  +G +P+I +Y++ I  LC + +  +A +L  +M KLG  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 558 PSVSLYNILYRA 569
           P+   Y  L + 
Sbjct: 199 PNAITYGTLMKG 210


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 190/377 (50%), Gaps = 35/377 (9%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L +++    ++ + G+ PN   +  L+ G CK G +  A+++F +I + GL        
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGL-------- 173

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                                       P++ ++N LI   C  G V EGF+L   M   
Sbjct: 174 ---------------------------RPTVVSFNTLISGCCKAGAVEEGFRLKGVMESE 206

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +V T++ LI GLCKE R+ E   L D+M   G+ PN +T+  LIDG C  G+ D A
Sbjct: 207 RVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLA 266

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            + F  + + G  P +VTYN LI    K G+ K A  LV EM   G+ P  +T+T LID 
Sbjct: 267 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDG 326

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +  DME A E+   M + G   D   + VLI GLC  G + +A ++   M     +P+
Sbjct: 327 CCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPD 386

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           D  Y M++  +CK+GN     +LL EM   G VP + +Y++ +  LC+ G+   A++LL+
Sbjct: 387 DPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLD 446

Query: 550 QMLKLGLKPSVSLYNIL 566
            ML +G+ P+   YNIL
Sbjct: 447 AMLNVGVAPNDITYNIL 463



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 199/382 (52%), Gaps = 4/382 (1%)

Query: 152 IKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           ++    ++ W F+ E        + + F +L+ G C+ G +  A  V +++ + G  P V
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V + +LI GCCK G +E    L   +    +     T++ LI GL K G   +G   +++
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G+ P+  T+  LI   C  GKV    K F  M  + V  ++VTYN LI GLCK   
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++EA RL+++M  +G+ P+ IT+  LIDG C  G+ + A  +  ++   G     V + V
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    + G    A  ++R+M   G  P + TYT+++D F +  ++   F++   MQ  G
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P V TY  L++GLC +G +K A  L ++M    + PND+ YN+++ G+ K G+S    
Sbjct: 418 HVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVD 477

Query: 511 RLLGEMNEKGLVPNIASYSSTI 532
                 +EKGLV + ASY++ +
Sbjct: 478 IF---NSEKGLVKDYASYTALV 496



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 75/136 (55%)

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +R  ++E+++  Y  +  SG+ P+ + + VL+HG C  G +  A  +F+ + +  L P  
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V +N +I G CK G      RL G M  + + P++ ++S+ I  LC++G+  E  +L ++
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 551 MLKLGLKPSVSLYNIL 566
           M   GL P+   + +L
Sbjct: 238 MCGKGLVPNGVTFTVL 253


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 218/461 (47%), Gaps = 11/461 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S I A  K R  ++A+    ++++ G  P + T+N     VI +C+    WL   +  
Sbjct: 220 YNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNP----VIDACAKGGRWLEAMDLL 275

Query: 169 CK-----VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +     +  DV S+  +I  C       +A ++L Q+   G SPNV+ Y S ID C K 
Sbjct: 276 GQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKG 335

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + A  L R++  +GLV T  +Y         NG   +  E  ++M   G++P+  +Y
Sbjct: 336 DRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISY 395

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N  +      G+  +  KL   M       +++++N+ I    +  + + A  LL +M  
Sbjct: 396 NSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPT 455

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG++PNVITYN  I+    +    +A  LF ++ + G SP+VVTYN +I A +K    ++
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWEL 515

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+  M  RG+ P  ++Y   I++  + +  E A ++   M   G  PD+ +Y   + 
Sbjct: 516 AVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLV 522
                G  +EA  L   M    L PN V Y   I   C +G  +  A+R+L EM   G  
Sbjct: 576 ACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHA-CGKGEQWDVAVRILKEMQTHGAT 634

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           PN+ +YS+ I    + G+W EA  LL  + + GL P    Y
Sbjct: 635 PNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTY 675



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 213/501 (42%), Gaps = 42/501 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y   I A    R    A+    +M   GV P   T+NS +    K   + +     ++  
Sbjct: 113 YNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMV 172

Query: 169 CKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              E    DV ++   I  C   G   +A ++L Q+   G  PN++ Y S I  C K   
Sbjct: 173 APTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRR 232

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ------------------------ 261
            E A  L  ++ E G   +  TY  +I    K G                          
Sbjct: 233 WEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSS 292

Query: 262 -----------KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
                      K+  +  E+M+  GVSP++ +YN  I       +  E   L  EM    
Sbjct: 293 VIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVG 352

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +   V++YN+         R  EA  LL +M   GI+PN I+YN  +D     G+ +KA 
Sbjct: 353 LVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAV 412

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L   + + G  P ++++N  I A  +    + A +L+REM   G+TP+ +TY   I++ 
Sbjct: 413 KLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEAC 472

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE-ASKLFNSMWETKLEPN 489
            RS   ++A  ++  M   G SP+V TY  +I   C KG   E A +L   M    + P+
Sbjct: 473 GRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA-CAKGEQWELAVQLLTGMPARGVAPD 531

Query: 490 DVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            + YN  I   C +G  +  AL+LL  M  +G  P+I SY+S +    + G+W EA  LL
Sbjct: 532 VISYNSAIEA-CGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLL 590

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
             M  +GL P+   Y     A
Sbjct: 591 KDMATVGLTPNTVSYGAAIHA 611



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 189/431 (43%), Gaps = 41/431 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD  S+ I I  C        A  +L ++   G +P+VV Y S I  C K G  + A  L
Sbjct: 108 LDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDL 167

Query: 233 FRKI--GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             ++     G+     TY   I      G  K+  +  E+M   GV P+L TYN  I   
Sbjct: 168 LTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGA- 226

Query: 291 CNEGK------------VSEGF------------------------KLFDEMRHREVACN 314
           C +G+            + +GF                         L  +M   ++  +
Sbjct: 227 CAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPAD 286

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V++Y+++I    +  R +EA  LL+QM+  G+SPNVI+YN  ID         +A  L  
Sbjct: 287 VISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLR 346

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ + G  P+V++YN    A +  G    A +L++EM  +GI P+ ++Y   +D+  +  
Sbjct: 347 EMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGG 406

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE-ASKLFNSMWETKLEPNDVVY 493
             EKA ++   M   G  PD+ ++   I   C +G   E A +L   M    L PN + Y
Sbjct: 407 QWEKAVKLLRGMSTVGSDPDIISFNSAIDA-CGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N  I    +      A+ L  EM  +GL PN+ +Y+S I    +  +W  A  LL  M  
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 554 LGLKPSVSLYN 564
            G+ P V  YN
Sbjct: 526 RGVAPDVISYN 536



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 172/377 (45%), Gaps = 2/377 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A   L++ +  G S +   Y   I  C        A  L R++   G+     TY 
Sbjct: 90  DWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYN 149

Query: 250 VLICGLFKNGLQKDGFEFYEKM--QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
             I    K G  K+  +   +M     G++P + TYN  I    N G+  E   L ++M 
Sbjct: 150 SAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMV 209

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  N++TYN+ I    K  R +EA  LL+++   G  P+  TYN +ID     G   
Sbjct: 210 AQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWL 269

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  L  Q+ +N     V++Y+ +I A  +    K A DL+ +M  +G++P+ ++Y   I
Sbjct: 270 EAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAI 329

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  + D  ++A ++   M   G  P V +Y        + G   EA +L   M    + 
Sbjct: 330 DACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIA 389

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN + YN  +    K G   +A++LL  M+  G  P+I S++S I    +  +W  A  L
Sbjct: 390 PNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVEL 449

Query: 548 LNQMLKLGLKPSVSLYN 564
           L +M   GL P+V  YN
Sbjct: 450 LREMPTAGLTPNVITYN 466



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 4/204 (1%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A    ++ K +G S    +YN+ I A S       A  L+REM   G+TP  VTY   I 
Sbjct: 94  ALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIA 153

Query: 429 SFVRSDDMEKAFEMYSLM--QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +  +    ++A ++ + M     G +PDV TY   I      G  KEA  L   M    +
Sbjct: 154 ACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGV 213

Query: 487 EPNDVVYNMMIFGYCKEGNSY-RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
            PN + YN  I G C +G  +  A+ LL E+ E+G  P+  +Y+  I    + G+W EA 
Sbjct: 214 PPNLITYNSAI-GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAM 272

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            LL QML   +   V  Y+ +  A
Sbjct: 273 DLLGQMLTNDIPADVISYSSVIAA 296



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 5/209 (2%)

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTY-NVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           G  + + R        G+  S+V   ++L+ A  +   + +A+  + E +  G +    +
Sbjct: 55  GSLEPSTRSRGAASRGGKPKSLVKLKSILLEAKGRDWRTALAA--LDEFKISGGSLDTTS 112

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y I I +         A  +   M   G +PDV TY   I      G  KEA  L   M 
Sbjct: 113 YNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMV 172

Query: 483 ETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                + P+ V YN  I      G    A+ LL +M  +G+ PN+ +Y+S IG   +  +
Sbjct: 173 APTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRR 232

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           W EA  LL ++++ G  PS   YN +  A
Sbjct: 233 WEEAMDLLEEVIEQGFPPSTRTYNPVIDA 261


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 241/470 (51%), Gaps = 1/470 (0%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   S  +  +I+   K+   ++AL ++ +M   G+ P     ++++   +K    ++  
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             F E+      +V+    ++   C+ G ++KA E+L ++E  G  PNVV Y +++   C
Sbjct: 429 KLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHC 488

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +  +++ A+ +F  + E GL    +TY++LI G FKN  +++  E   +M  + +  +  
Sbjct: 489 RKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGV 548

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-NVVTYNTLICGLCKEMRVQEAERLLDQ 340
            Y  +I+  C  G+ S+  +L   M   +  C + ++YN++I G  KE  +  A    ++
Sbjct: 549 VYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   GISPNVITY  L+DG C     D+A  + +++K+ G    +  Y  LI  F K  N
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSN 668

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + AS L  E+ E G+ PS+  Y  LI  F    +M  A ++Y  M K G   D+ TY  
Sbjct: 669 MESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 728

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GL  +GN+  AS L+  M    L P++++Y +++ G  K+G   + +++  EM +  
Sbjct: 729 LIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNN 788

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           + PN+  Y++ I    ++G   EA  L ++ML  G+ P  + ++IL   K
Sbjct: 789 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGK 838



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 275/628 (43%), Gaps = 90/628 (14%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A   +NWA   +G         +++ +L++  S  ++  A  L+++ +S    +S+ 
Sbjct: 85  PEAALRFYNWARPWRGSFEDGDVFWVLIHILVT--SPETYGRASDLLIRYVS----TSNP 138

Query: 84  TPR-----SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           TP      S L    +LF    N    SR +  +++A+ K R +D A+   +QML+ GV 
Sbjct: 139 TPMASVLVSNLVDSAKLFGFEVN----SRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVI 194

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFS-----------------------ENRCKVELDV 175
           P     N  L  +++  S  +    +S                       E +    L+V
Sbjct: 195 PFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEV 254

Query: 176 YS-------------FGILIKGCCEAGDLNKAFEVLNQLEEM------------------ 204
           +S             + + ++ CC+  +L  A  +L +++E                   
Sbjct: 255 FSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASV 314

Query: 205 ------------------GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
                             G S NVV  TSLI G CKN D+  A  LF K+   G      
Sbjct: 315 KQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSV 374

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T++VLI    KNG  +   EFY+KM+  G++PS++  + +I  +    K  E  KLFDE 
Sbjct: 375 TFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 434

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +A NV   NT++  LCK+ ++ +A  LL +M+  GI PNV++YN ++   C     
Sbjct: 435 FETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNM 493

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A  +F+ +   G  P+  TY++LI    K  + +   ++V +M    I  + V Y  +
Sbjct: 494 DLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTI 553

Query: 427 IDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           I+   +     KA E+ + ++++  F     +Y  +I G   +G M  A   +  M    
Sbjct: 554 INGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG 613

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + PN + Y  ++ G CK     +AL +  EM  KG+  +I +Y + I   C+      A 
Sbjct: 614 ISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESAS 673

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            L +++L+ GL PS  +YN L     N+
Sbjct: 674 ALFSELLEEGLNPSQPVYNSLISGFRNL 701



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 198/392 (50%), Gaps = 2/392 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A     +M   G+ P   ++N++++   +  + D     FS    K ++ + Y++ IL
Sbjct: 459 DKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSIL 518

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGELG 240
           I GC +  D     EV+NQ+       N V+Y ++I+G CK G   +A+ +L   I E  
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 578

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
              +  +Y  +I G  K G        YE+M  NG+SP++ TY  L+   C   ++ +  
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQAL 638

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++ DEM+++ V  ++  Y  LI G CK+  ++ A  L  ++   G++P+   YN LI GF
Sbjct: 639 EMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF 698

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            + G    A  L+ ++  +G    + TY  LI    K GN  +ASDL  EM+  G+ P E
Sbjct: 699 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDE 758

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           + YT++++   +     K  +M+  M+K+  +P+V  Y  +I G   +GN+ EA +L + 
Sbjct: 759 IMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 818

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           M +  + P+   +++++ G   +    RA  L
Sbjct: 819 MLDKGILPDGATFDILVSGKVGKFQPIRAASL 850


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 249/527 (47%), Gaps = 46/527 (8%)

Query: 77  RITSSSFTPRSLLC-HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           RI S   T R L    L    PS    +  + +Y ++I    +     +A   F++ML  
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELN-AVVYCTVISGFYEENYQVEAYELFNKMLRL 210

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDL--- 191
           G+ P   TFN L+  + K     +G    ++  +  V  ++++F I I+G C  G L   
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270

Query: 192 -NKAFEVLNQLEEM--------------------------------------GFSPNVVI 212
            +K  E  N L +M                                      GF P+   
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y SLI G C++GDI+ A  LF +    GL  +   Y  LI GL + GL     +    M 
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+SP ++TYN +I+  C  G VS+   L +    +    ++ T+NTLI G CK +++ 
Sbjct: 391 KEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMD 450

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
            A  +LD M   G++P+VITYN +++G C A + +     F  +   G  P+++TYN+LI
Sbjct: 451 NAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILI 510

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM-QKSGF 451
            +  KA     A DL+ E+  RG+ P  V++  +I  F  + D+++A++++  M Q+   
Sbjct: 511 ESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRI 570

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
              V TY ++I+    K +M  A KLF+ M +   +P+   Y +MI G+CK GN      
Sbjct: 571 CHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYD 630

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            L +  E G VP++ ++   I  LC   +  EA  +++ M++ G+ P
Sbjct: 631 FLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 7/402 (1%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E  ++S+  ++    E G  N+A +V  +++  G +P+V  +T  I   C+      A  
Sbjct: 108 EPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALR 167

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L   +   G       Y  +I G ++   Q + +E + KM   G+ P + T+N L+H  C
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILC 227

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE-------MRVQEAERLLDQMKMA 344
            +G + EG KL +++    V  N+ T+N  I GLC++        +V EAE  L +M   
Sbjct: 228 KKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNK 287

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+  TYN +I G+   G+   A R+    K  G  P   TY  LI    + G+   A
Sbjct: 288 GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  E   +G+ PS V Y  LI    +   + KA ++ + M K G SPD++TY ++I+G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC  G + +A+ L N+       P+   +N +I GYCK      A+ +L  M   G+ P+
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +Y+S +  LC+  K  +       +++ G  P++  YNIL
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNIL 509



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G  P   T+ SL+I V +    D     F E   K ++  +  +  LIKG  + G + KA
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            +++N + + G SP++  Y  +I+G CK G +  A  L       G +    T+  LI G
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K     +     + M  +GV+P + TYN +++  C   K  +  + F  +  +    N
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPN 502

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           ++TYN LI  LCK  +V EA  LL++++  G+ P+ +++  +I GFC+ G+ D+A++LF 
Sbjct: 503 IITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFR 562

Query: 375 QLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++   +   +V TYN++I AFS+  +  MA  L  EM ++G  P   TY ++ID F + 
Sbjct: 563 RMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKV 622

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
            ++   ++      + GF P + T+G +I+ LC++  + EA  + + M  T + P  VV
Sbjct: 623 GNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 199/420 (47%), Gaps = 48/420 (11%)

Query: 193 KAFEVLNQLE-EMGFSPNVVIYTSLIDGCCKNGD---IERAKMLFRKIGELGLVATQHTY 248
           KA  + N ++ E GF    + Y  +I+    +G+   +ER  M  R   +  L+  +  Y
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLL--EGVY 79

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
              +    + G  ++  + +E+M      PS+++YN +++     G  ++  K++  M+H
Sbjct: 80  VSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKH 139

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQM--------------------------- 341
             +A +V T+   I   C+  R   A RLL+ M                           
Sbjct: 140 EGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE 199

Query: 342 ------KM--AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
                 KM   GI P++ T+NKL+   C  G   +  +L N++  NG  P++ T+N+ I+
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 394 AFSKAG-----NSKM--ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
              + G     NSK+  A + + +M  +G+ P + TY  +I  + +   ++ A  +    
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +  GF PD +TY  LI G+C  G++  A  LF       L+P+ V+YN +I G  ++G  
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +AL+L+ +M+++G+ P+I +Y+  I  LC+ G   +A  LLN  +  G  P +  +N L
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 10/309 (3%)

Query: 270 KMQLNGVSPSLY--TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +M+LN V  SL    Y   +  Y  +GKV E   +F+ M       ++ +YN ++  L +
Sbjct: 65  EMRLN-VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVE 123

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                +A ++  +MK  GI+P+V T+   I  FC       A RL N + S G   + V 
Sbjct: 124 YGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVV 183

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  +I  F +      A +L  +M   GI P   T+  L+    +   +++  ++ + + 
Sbjct: 184 YCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMK-------EASKLFNSMWETKLEPNDVVYNMMIFGY 500
           K+G  P+++T+ + I GLC KG ++       EA    + M    LEP+D  YN +I+GY
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            K G    A R+L +   KG VP+  +Y S I  +CQDG    A  L  + L  GLKPS+
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363

Query: 561 SLYNILYRA 569
            LYN L + 
Sbjct: 364 VLYNTLIKG 372


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 235/505 (46%), Gaps = 71/505 (14%)

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKG 184
           L  F +M+ +G+ P     N +L  +       K   ++    +  ++  V ++  ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G +++A E+L++++E G  PN V Y  L++G  K G++E+AK L  ++   GL  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKM-----------------------QLNGV----- 276
            +TY  LI G  + GL  + F+  E+M                       Q+ GV     
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 277 -------SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
                  +P + ++N L++ YC  G +SE F LFDE++ R++   V+TYNTLI GLC   
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS------- 382
            +  A RL  +M   G+ P++ TY  L++G    G    A   FN++ S G         
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 383 ----------------------------PSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
                                       P V+TYNV + A  + GN + A DL+  M   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  VTYT +I+ FV++  + KA E+++ M   G +P V TY VLIH    K  +  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
              F+ M E  +  N + YN +I G C       A +   EM EKG++PN  SY+  I  
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPS 559
            C  G W EA  L  +ML   ++P 
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 194/379 (51%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+KA  V   +E+ G  P VV Y +++D  CK G +++A  L  ++ E G      TY V
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ GL K G  +      E+M  +G++ S YTYN LI+ +C +G   E F L +EM +R 
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               + TYNTL+ GLCK ++V         M  +  +P+++++N L+ G+C  G   +AF
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF++LK     P+V+TYN LI      G    A  L +EM ++G+ P   TYTIL++  
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +  A   ++ M   G  PD + Y   I G     +   A  +   M      P+ 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN+ +   C++GN   A  LL  M   GL+P+  +Y+S I    ++G   +A  + N+
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 551 MLKLGLKPSVSLYNILYRA 569
           ML  G+ PSV  Y +L  A
Sbjct: 556 MLSKGVAPSVVTYTVLIHA 574



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 215/466 (46%), Gaps = 36/466 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +++D++ K    DQAL    +M + G  P   T+N L+  + K    ++      E  
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE------------------------- 202
              + +  Y++  LI G C+ G   +AF+++ ++                          
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337

Query: 203 ----------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                     +  F+P++V + SL+ G C+ G I  A +LF ++    LV T  TY  LI
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL   G         ++M   G+ P ++TY  L++     G VS     F+EM  + + 
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +   YNT I G  K      A  + ++M  AG  P+VITYN  +   C  G  ++A  L
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              + S+G  P  VTY  +I  F K G+ + A ++  EM  +G+ PS VTYT+LI +   
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ AF  +S M +     +V TY  +I+GLCM   M EA K F+ M E  + PN   
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           Y ++I   C  G    ALRL  EM ++ + P+  ++S  +  L +D
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 157/355 (44%), Gaps = 36/355 (10%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML S   P   +FNSLL    ++    + +L F E +C+ +   V ++  LI G C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A  +  ++ + G  P++  YT L++GC K G +  A+  F ++   GL   +  
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y   I G  K       F   E+M   G  P + TYN  +H  C +G   E   L + M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP------------------- 348
              +  + VTY ++I G  K   +++A  + ++M   G++P                   
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 349 ----------------NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
                           NVITYN +I+G C     D+A++ F++++  G  P+  +Y +LI
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
                 G  + A  L REM +R I P   T+++ + +  R   +     + SL+Q
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 145/349 (41%), Gaps = 62/349 (17%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           D AL    +M D G+ P   T+  L+   F +   S  +G  FF+E   K ++ D +++ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARG--FFNEMLSKGLKPDRFAYN 464

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
             I G  +  D + AF +  ++   GF P+V+ Y   +   C+ G+ E A  L   +   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           GL+    TYT +I G  KNG  +   E + +M   GV+PS+ TY  LIH +  +  +   
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-------------- 345
           F  F +M  + V  NV+TYN +I GLC   R+ EA +  D+M+  G              
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 346 ---------------------ISPNVITYN---------------KLIDGFCDAGETDKA 369
                                I P+  T++               + ++      E +  
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNIN 704

Query: 370 FRLFNQLK-------SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            RL    K       +  QSP + +   LI + S+ GN   +S + R M
Sbjct: 705 VRLLRPRKNVMEENFARSQSPMLRSSAFLIGSSSELGNGNGSSSINRAM 753


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 234/465 (50%), Gaps = 6/465 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++++A  K+     A  +  ++L  G    ++   SL++   +     + +  F    
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  C+     YS  ILI G CEAG L +AF++  ++ E G  P+   YT LI   C  G
Sbjct: 191 KEESCRPNSVTYS--ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 248

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ++A  +  ++     V   HTYT+LI  L + G  ++    + KM  +G+ P + T+N
Sbjct: 249 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 308

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC EG V   F+L   M       N+ TYN L+ GLC+  +  +A  LL ++   
Sbjct: 309 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 368

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P+ +TYN L+DGFC  G+ + AF +FN + S G  P   T+  LI    K G  + A
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + ++  M ++GI+  EVT+T LID   +    +    ++  M ++      +T+   +  
Sbjct: 429 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 488

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L     + EA+ +   M +  L P+ V + ++I G+C+ G +  +L++L  M + G  PN
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +Y+  I  LC +G+  EAE +L  M   G+ P+   Y +L +A
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 593



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 5/433 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N VT S L   + +A    RL ++A     +M++ G +P + T+  L+         DK 
Sbjct: 198 NSVTYSILIHGLCEA---GRL-EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 253

Query: 161 WLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
                E   K  + +V+++ ILI   C  G + +A  V  ++ + G  P ++ + +LI+G
Sbjct: 254 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 313

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK G +  A  L   + +        TY  L+ GL +       F    ++  NG+ P 
Sbjct: 314 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 373

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             TYN L+  +C EG+++  F +F+ M    +  +  T+  LI GLCK  R+++A  +L 
Sbjct: 374 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 433

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M   GIS + +T+  LIDG C  G+      LF  +  N    +  T+N  + A  K  
Sbjct: 434 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 493

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A+ ++ +M + G+ PS VT+TILI+   R+ +   + +M   M+++G SP+VYTY 
Sbjct: 494 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 553

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++I+GLC  G ++EA  +  SM    + PN   Y +++  + K G   RA +++  M + 
Sbjct: 554 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 613

Query: 520 GLVPNIASYSSTI 532
           G  PN   YS+ +
Sbjct: 614 GCQPNSHIYSALL 626



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 5/450 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           R Y  +++   +   S +A     +++D+G+ P   T+N L+    K    +  + +F S
Sbjct: 340 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 399

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N   +E D ++F  LI G C+ G L +A  +L  + + G S + V +T+LIDG CK G 
Sbjct: 400 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 459

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +    LF  + E   + T HT+   +  L K+    +      KM   G+ PS+ T+  
Sbjct: 460 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 519

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C  G+ +   K+ + M+    + NV TY  +I GLC   RV+EAE +L  M   G
Sbjct: 520 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 579

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +SPN  TY  L+     AG  D+AF++ + +  NG  P+   Y+ L+  F  +  +  A 
Sbjct: 580 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGAR 639

Query: 406 DL--VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
            L    +++ R ++  E     L     R  D++ A ++   ++K G  P    Y  L+ 
Sbjct: 640 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVV 698

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC +G + EA +L   M +  L P+  + ++ I  YCK       L  +  + +   VP
Sbjct: 699 GLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVP 757

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + ASY   I  L  +G+  EA+ L++ +++
Sbjct: 758 SFASYCWVIHGLRNEGRVQEAQKLVSDLVR 787



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 226/477 (47%), Gaps = 36/477 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----- 163
           Y  +ID   +    ++A   F +ML  G+ P   TFN+L+    K     +GW+      
Sbjct: 272 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK-----EGWVVSAFQL 326

Query: 164 ---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                +  CK  +  Y+   L++G C      KAF +L ++ + G  P+ V Y  L+DG 
Sbjct: 327 LSVMEKGNCKPNIRTYNE--LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 384

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G +  A  +F  +   GL     T+T LI GL K G  +        M   G+S   
Sbjct: 385 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 444

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            T+  LI  +C  GK  +   LF+ M          T+N  +  L K+ ++ EA  +L +
Sbjct: 445 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 504

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G+ P+V+T+  LI+G C AGET  + ++  ++K  G SP+V TY ++I      G 
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  ++  M   G++P+  TY +L+ + V++  +++AF++ S M K+G  P+ + Y  
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKL-----EPNDVVYNMMIFGYCKEGNSYR------A 509
           L+ G  +  N    ++  +S  +        E ND          C   + +R      A
Sbjct: 625 LLSGFVLS-NTAIGARALSSTGDLDARSLSSEEND--------NNCLSSHVFRLMDVDHA 675

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L++  E+ + G VP    Y+  +  LC++G+  EA+ L   M+K GL P  ++ +I+
Sbjct: 676 LKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 731



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            F ++  M +       + Y T++  LCK   VQ AE    ++   G   +      L+ 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 359 GFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             C   +  +AFR+F ++ K     P+ VTY++LI    +AG  + A  L +EM E+G  
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS  TYT+LI +       +KA +M   M      P+V+TY +LI  LC +G ++EA+ +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  M +  L P  + +N +I GYCKEG    A +LL  M +    PNI +Y+  +  LC+
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             K  +A +LL +++  GL P    YNIL
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G   S   Y+ L+    + +    AF +Y  M   GF      Y  +++ LC  G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN-EKGLVPNIASYS 529
           ++ A      +       +  V   ++   C+  +   A R+  +M+ E+   PN  +YS
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYS 203

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             I  LC+ G+  EA  L  +M++ G +PS   Y +L +AK +I
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 206/384 (53%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            LD  S+G LI G C+ G+   A +VL +++ +   PNVV+Y ++ID  CK+  +  A  
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++    +     TYT LI G    G  K+    + +M L  + P +YT+N L+   C
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EG++ +   +   M  + V  N+VTYN+L+ G     +  +A  + + M   G++P+V 
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y+ +I+G C     D+A  LF ++ S   +P+ VTYN LI    K G    A DLV EM
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             RG     +TY+ L+D+  ++  ++KA  + + ++  G  P++YTY +L+ GLC  G +
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           K+A  ++  +       +  +YN+M+ G CKEG    AL L+ +M + G +P+  +Y + 
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLG 555
           +  L ++ K  +A  LL +M+  G
Sbjct: 526 VRALFENDKNDKAVKLLREMIVQG 549



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 239/483 (49%), Gaps = 20/483 (4%)

Query: 96  FPSSSNPV---TKSRLY-----ESIIDAHLKSRLSDQALFYFHQMLD--SGVRPRSNTFN 145
           FPS+ N       SRLY      S ID        D A+  F+ +L   + V+P    FN
Sbjct: 16  FPSTPNLFLLCRHSRLYYTQPLPSFIDN------VDDAVSSFNHILHMRNPVQPIFE-FN 68

Query: 146 SLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
            +L  ++K   F     F  +   K ++ D+++F ILI   C  G LN AF VL ++ ++
Sbjct: 69  KILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKL 128

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF P+ V  T+LI G C NG +  A      +   G    Q +Y  LI GL K G  +  
Sbjct: 129 GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAA 188

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            +   K+    V P++  YN +I   C +  V     L  EM  + +  +VVTY TLI G
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
                R++EA  L +QM +  I P+V T+N L+DG C  GE  KA  +   +   G   +
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN 308

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +VTYN L+  +        A+ +   M  RG+TP   +Y+I+I+   ++  +++A  ++ 
Sbjct: 309 IVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFK 368

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKE 503
            M     +P+  TY  LI GL   G + +A  L N M   + +P DV+ Y+ ++   CK 
Sbjct: 369 EMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM-HNRGQPADVITYSSLLDALCKN 427

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               +A+ L+ ++ ++G+ PNI +Y+  +  LC++G+  +A+ +   +L  G    V +Y
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487

Query: 564 NIL 566
           N++
Sbjct: 488 NVM 490



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 3/253 (1%)

Query: 132 MLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
           M+  GV     T+NSL+   F++K  +    ++F +  R  V  DV S+ I+I G C+  
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQEN-KATFVFNTMARRGVTPDVQSYSIMINGLCKTK 358

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +++A  +  ++     +PN V Y SLIDG  K G I  A  L  ++   G  A   TY+
Sbjct: 359 MVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYS 418

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+  L KN           K++  G+ P++YTY  L+   C  G++ +   ++ ++  +
Sbjct: 419 SLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIK 478

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +V  YN ++ GLCKE    EA  L+ +M+  G  P+ +TY  L+    +  + DKA
Sbjct: 479 GYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538

Query: 370 FRLFNQLKSNGQS 382
            +L  ++   G +
Sbjct: 539 VKLLREMIVQGSA 551



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 32/252 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILR-LLLSKMSSHSHAAAQTLILKIISGRITSSSFTP 85
           KA  +FN  +R+G+    QS SI++  L  +KM   +    +          + S S  P
Sbjct: 327 KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFK---------EMHSKSMAP 377

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTF 144
                          N VT    Y S+ID  LK  R+SD A    ++M + G      T+
Sbjct: 378 ---------------NTVT----YNSLIDGLLKYGRISD-AWDLVNEMHNRGQPADVITY 417

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           +SLL  + K+   DK     ++ + + ++ ++Y++ IL+ G C+ G L  A  V   L  
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G+  +V +Y  +++G CK G  + A  L  K+ + G +    TY  L+  LF+N     
Sbjct: 478 KGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDK 537

Query: 264 GFEFYEKMQLNG 275
             +   +M + G
Sbjct: 538 AVKLLREMIVQG 549


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 212/437 (48%), Gaps = 22/437 (5%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----------IFVIKSCSFDKG 160
           +++   K    ++AL +  ++ + G  P   TFNSL+              I     +KG
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           +          + DVY++  LI G C+ G+  KA E+L Q+     SPN V Y +LI   
Sbjct: 294 F----------DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK  +IE A  L R +   GL+    T+  LI GL  +  Q    E +E+M+  G  P  
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +TY+ LI   C E ++ E   L  EM     A N V YNTLI GLCK  R+++AE + DQ
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M++ G+S + +TYN LIDG C     ++A +L +Q+   G  P   TYN L+  F + G+
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A D+V+ M   G  P   TY  LI    R+  ++ A ++   +Q  G     + Y  
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEK 519
           +I  L M+   KE  +LF  M E    P+ + + ++  G C  G   + A+    EM EK
Sbjct: 584 VIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643

Query: 520 GLVPNIASYSSTIGVLC 536
           G++P   S+      LC
Sbjct: 644 GILPEFPSFGFLAEGLC 660



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 251/514 (48%), Gaps = 15/514 (2%)

Query: 56  SKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSS--NPVTKSRLYESII 113
           S  + H     +TL+L++      SSSF   S+   L QL  S S  N  T + L +S  
Sbjct: 48  SSTTHHPLPPNETLLLQLTQ----SSSFD--SITTLLKQLKSSGSIPNATTFATLIQSFT 101

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VE 172
           + H    L    L      L  G +P +N +N  L  +++        +  S+   + + 
Sbjct: 102 NFHEIENL----LKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIV 155

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LDV +F +LIK  C+A  L  A  +L ++   G  P+ + +T+L+ G  + GD+  A  +
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKM 215

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            +++   G + T  +  VL+ G  K G  ++   F  ++   G SP   T+N L++ +C 
Sbjct: 216 KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G V++   + D M  +    +V TYN+LI G+CK    ++A  +L QM +   SPN +T
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI   C   E + A  L   L S G  P V T+N LI+    + N  +A ++  EM+
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G  P E TY+ILIDS      +++A  +   M+ SG + +   Y  LI GLC    ++
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A ++F+ M    +  + V YN +I G CK      A +L+ +M  +GL P+  +Y+S +
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              C+ G   +A  ++  M   G +P +  Y  L
Sbjct: 516 TYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 218/440 (49%), Gaps = 1/440 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M++ G+    +TFN L+  + K+       L   E     ++ D  +F  L++G  E G
Sbjct: 148 KMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEG 207

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DLN A ++  Q+   G     V    L++G CK G +E A     ++ E G    Q T+ 
Sbjct: 208 DLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN 267

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G   D  +  + M   G  P +YTYN LI   C  G+  +  ++  +M  R
Sbjct: 268 SLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILR 327

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           E + N VTYNTLI  LCKE  ++ A  L   +   G+ P+V T+N LI G C +   D A
Sbjct: 328 ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             +F ++K+ G  P   TY++LI +       K A  L++EME  G   + V Y  LID 
Sbjct: 388 MEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDG 447

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +S  +E A E++  M+  G S    TY  LI GLC    ++EAS+L + M    L+P+
Sbjct: 448 LCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              YN ++  +C+ G+  +A  ++  M   G  P+I +Y + IG LC+ G+   A  LL 
Sbjct: 508 KFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLR 567

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            +   G+  +   YN + +A
Sbjct: 568 SVQMKGIVLTPHAYNPVIQA 587



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 231/496 (46%), Gaps = 39/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  +I A  K+     A+    +M + G++P   TF +L+   I+    + G L   +  
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLN-GALKMKKQM 219

Query: 169 CKVE--LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 L   S  +L+ G C+ G + +A   + ++ E GFSP+ V + SL++G C+ G++
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   + E G     +TY  LI G+ K G  +   E  ++M L   SP+  TYN L
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339

Query: 287 IHEYCNEGK-----------VSEGF------------------------KLFDEMRHREV 311
           I   C E +           VS+G                         ++F+EM+++  
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +  TY+ LI  LC E R++EA  LL +M+ +G + N + YN LIDG C +   + A  
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +F+Q++  G S S VTYN LI    K    + AS L+ +M   G+ P + TY  L+  F 
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFC 519

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R  D+EKA ++   M  +G  PD++TYG LI GLC  G +  ASKL  S+    +     
Sbjct: 520 RVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPH 579

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-DGKWPEAEVLLNQ 550
            YN +I        +   +RL  EM EK   P+  ++      LC   G   EA     +
Sbjct: 580 AYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVE 639

Query: 551 MLKLGLKPSVSLYNIL 566
           ML+ G+ P    +  L
Sbjct: 640 MLEKGILPEFPSFGFL 655



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 145/371 (39%), Gaps = 78/371 (21%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++I A  K    + A      ++  G+ P   TFN+L+  +  S + D
Sbjct: 330 SPNTVT----YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                F E + K  + D +++ ILI   C    L +A  +L ++E  G + N V+Y +LI
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN----------------GLQ 261
           DG CK+  IE A+ +F ++  LG+  +  TY  LI GL KN                GL+
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505

Query: 262 KDGFEF-------------------YEKMQLNGVSPSLYTYNCLIHEYCNEGKVS----- 297
            D F +                    + M  NG  P ++TY  LI   C  G+V      
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565

Query: 298 ------------------------------EGFKLFDEMRHREVACNVVTYNTLICGLCK 327
                                         EG +LF EM  +    + +T+  +  GLC 
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCN 625

Query: 328 EM-RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
               +QEA     +M   GI P   ++  L +G C     D    L N +    Q     
Sbjct: 626 GGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE 685

Query: 387 TYNVLIRAFSK 397
           T   +IR F K
Sbjct: 686 TS--MIRGFLK 694


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 200/375 (53%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           N+   ++ +L E   +PNV  +  +ID  CK G++  A+ LF ++  +G      TY  L
Sbjct: 181 NRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSL 240

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G  ++      +M+ +G +  + TYN LI+ +   G + + +  F EM+   V
Sbjct: 241 IDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV 300

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NVVT +T +   CKE  V+EA +L  QM++ G+ PN  TY  L+DG C AG  D A  
Sbjct: 301 MANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 360

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++   G  P+VVTY V++    K G   +A D++  ME  G+  +E+ YT LI    
Sbjct: 361 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHF 420

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + + E+A ++ + M+  G   DV  YG LI GLC    + EA  L + M +  L PN V
Sbjct: 421 MNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTV 480

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +Y  ++  + K G    A+ LL ++ + GL PN+ +Y + I  LC+ G   EA    ++M
Sbjct: 481 IYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540

Query: 552 LKLGLKPSVSLYNIL 566
            +LGL P+V +Y  L
Sbjct: 541 RELGLDPNVQVYTTL 555



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 238/486 (48%), Gaps = 49/486 (10%)

Query: 125 ALFYFHQMLDSGVR-----------PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
           +L   H +LD  VR           P + T N +L+ + ++    +G L           
Sbjct: 141 SLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN---RQGGLVRRLFEHLPAP 197

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V++F I+I   C+ G+L +A  +  +++ MG SP+VV Y SLIDG  K G++E  ++L 
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G  A   TY  LI    K G  +  + ++ +M+  GV  ++ T +  +  +C E
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G V E  KLF +MR R +  N  TY +L+ G CK  R+ +A  LLD+M   G+ PNV+TY
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377

Query: 354 NKLIDGFCDAGE-----------------------------------TDKAFRLFNQLKS 378
             ++DG C  G+                                   +++A  L N++K+
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G    V  Y  LI    K      A  L+ +M++ G+ P+ V YT ++D+F ++    +
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  +   +  SG  P+V TY  LI GLC  G++ EA   F+ M E  L+PN  VY  +I 
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+CK G+  +A+ L+ EM +KG+  +   Y+S I    + G    A  L  +M++ GL+ 
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 559 SVSLYN 564
            +  Y 
Sbjct: 618 DLYCYT 623



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 213/444 (47%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+ID + K    ++      +M  SG      T+N+L+    K    +K + +F E  
Sbjct: 237 YNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMK 296

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  +V +    +   C+ G + +A ++  Q+   G  PN   YTSL+DG CK G ++
Sbjct: 297 RLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 356

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +L  ++   GLV    TYTV++ GL K G      +    M+  GV  +   Y  LI
Sbjct: 357 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLI 416

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +           L +EM+++ +  +V  Y TLI GLCK  ++ EA+ LL +M   G+ 
Sbjct: 417 HGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLR 476

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN + Y  ++D F  AG+  +A  L +++  +G  P+VVTY  LI    KAG+   A   
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISH 536

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M E G+ P+   YT LID F +   + KA  + + M   G S D   Y  LI G   
Sbjct: 537 FDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMK 596

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G+++ A  L   M ET L+ +   Y   I G+C       A  +L EM   G+ P+  +
Sbjct: 597 QGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTA 656

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           Y+  I    + G   EA  L N+M
Sbjct: 657 YNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 193/361 (53%), Gaps = 10/361 (2%)

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN---GLQKDGFEFY 268
           ++ +L+     +G ++ A     ++ +L +     T   ++  L +N   GL +  FE  
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
                   +P+++T+N +I   C +G++ E   LF  M+    + +VVTYN+LI G  K 
Sbjct: 195 P-------APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             ++E E L+ +M+ +G + +V+TYN LI+ F   G  +KA+  F ++K  G   +VVT 
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           +  + AF K G  + A  L  +M  RG+ P+E TYT L+D   ++  ++ A  +   M  
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+V TY V++ GLC +G +  A  + + M    ++ N+++Y  +I G+    NS R
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           AL LL EM  KG+  +++ Y + I  LC+  K  EA+ LL++M   GL+P+  +Y  +  
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 569 A 569
           A
Sbjct: 488 A 488



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 168/384 (43%), Gaps = 40/384 (10%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +N VT S    + +DA  K  L  +A+  F QM   G+ P   T+ SL+    K+   D 
Sbjct: 302 ANVVTLS----TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 357

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
             +   E   + +  +V ++ +++ G C+ G +  A +VL+ +E  G   N ++YT+LI 
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417

Query: 219 G-----------------------------------CCKNGDIERAKMLFRKIGELGLVA 243
           G                                    CK   ++ AK L  K+ + GL  
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               YT ++   FK G + +      K+  +G+ P++ TY  LI   C  G + E    F
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D+MR   +  NV  Y TLI G CK   + +A  L+++M   G+S + + Y  LIDG    
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQ 597

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+   AF L  ++   G    +  Y   I  F      + A  ++ EM   GITP +  Y
Sbjct: 598 GDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAY 657

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQ 447
             LI  + +  +ME+A  + + M+
Sbjct: 658 NCLIRKYQKLGNMEEASSLQNEME 681



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 1/272 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSE 166
           LY ++I  H  ++ S++AL   ++M + G+    + + +L+  + K    D+   L    
Sbjct: 411 LYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + C +  +   +  ++    +AG  ++A  +L+++ + G  PNVV Y +LIDG CK G I
Sbjct: 471 DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSI 530

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A   F K+ ELGL      YT LI G  K G          +M   G+S     Y  L
Sbjct: 531 YEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +  +G +   F L  +M    +  ++  Y   I G C    +QEA  +L +M   GI
Sbjct: 591 IDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 650

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           +P+   YN LI  +   G  ++A  L N+++S
Sbjct: 651 TPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +I+DA  K+    +A+   H++ DSG++P   T+ +L+  + K+ S  +    F + 
Sbjct: 481 IYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540

Query: 168 R-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   ++ +V  +  LI G C+ G L+KA  ++N++ + G S + V+YTSLIDG  K GD+
Sbjct: 541 RELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDL 600

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  K+ E GL    + YT  I G     + ++      +M   G++P    YNCL
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCL 660

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN 314
           I +Y   G + E   L +EM     +C 
Sbjct: 661 IRKYQKLGNMEEASSLQNEMESVLSSCT 688


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 244/495 (49%), Gaps = 37/495 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           ++ ++ AH  +     AL+ F +M  +G R    + N LL  ++++         F + R
Sbjct: 97  FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMR 156

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C   L D ++  I+ K  C  G +  A + L ++EEMG   N+V Y +++DG C+ G  E
Sbjct: 157 CAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTE 216

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCL 286
            A+ L   +   GL     TYT+L+ G  K G  ++  +  ++++ N  +      Y  L
Sbjct: 217 VARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGAL 276

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC  G++ +  ++ DEM    V  N+  YNT+I G CK  R+ E E+LL   +  G+
Sbjct: 277 INGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGV 336

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           + +  +YN L+DG+C  G   KAF   + +  NG + + +TYN L+  F   G    A  
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M +RG+ P+E++ + L+D F ++   E+A  ++      G + +V T   +I+GLC
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL------LG------ 514
               M EA +LF+ M E     + + Y  +I GYCK G+  RA ++      LG      
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516

Query: 515 -----------------------EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
                                  EM+ KGL PN  +Y + I   C++G   +A +L  +M
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576

Query: 552 LKLGLKPSVSLYNIL 566
           ++ GLKP++ + ++L
Sbjct: 577 VEKGLKPNLFICSVL 591



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 217/440 (49%), Gaps = 27/440 (6%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRC 169
           +++D   K+  ++QAL  + + L  G+     T N+++  + K+    +   LF      
Sbjct: 415 TLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEW 474

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
               D  ++  LI G C+ GDL +A ++  ++E +GF P+V ++ S I G        + 
Sbjct: 475 SCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKV 534

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +  ++   GL     TY  LI G  K G   D    Y +M   G+ P+L+  + L+  
Sbjct: 535 NDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSC 594

Query: 290 YCNEGKVSEGFKLFDEMRHREVA--CNVVT------------------------YNTLIC 323
           +  EGKV E   +  ++   ++   C+  T                        +N +I 
Sbjct: 595 FYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVIL 654

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  RV +A  L + +K+ G  P+  TY+ LI G   +G  D AF L +++ S   +P
Sbjct: 655 GLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTP 714

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           ++VTYN LI    K+ N   A  L  +++ +GI+P+ +TY  LID   +  +  +AF++ 
Sbjct: 715 NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLK 774

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M K G  P V+TY +LIHGLC +G M+EA KL + M E  ++PN + Y  +I GY + 
Sbjct: 775 QKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARC 834

Query: 504 GNSYRALRLLGEMNEKGLVP 523
           GN     +L  EM+  GL+P
Sbjct: 835 GNMKAITKLYNEMHICGLLP 854



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 243/520 (46%), Gaps = 62/520 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+ + +    + A     +M+D+GV+     +N+++    K     +       N 
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V LD YS+  L+ G C  G + KAFE  + +   GF+   + Y +L++G C  G I+
Sbjct: 333 YRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAID 392

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L+  + + G+V  + + + L+ G FK G  +     +++    G++ ++ T N +I
Sbjct: 393 DALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVI 452

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK--------EMRVQ------- 332
           +  C   +++E  +LF  M+     C+ +TY TLI G CK        ++R++       
Sbjct: 453 NGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFV 512

Query: 333 -----------------EAERLLD---QMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                            ++ ++ D   +M   G+SPN +TY  LI G+C  G    A  L
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT--------------- 417
           + ++   G  P++   +VL+  F + G    A+ +++++ +  +                
Sbjct: 573 YFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAH 632

Query: 418 -----------PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
                       +++ + I+I    +   +  A  ++  ++  GF PD +TY  LIHG  
Sbjct: 633 IIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCS 692

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G++  A  L + M   +L PN V YN +I+G CK  N  RA+ L  ++  KG+ PN  
Sbjct: 693 ASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAI 752

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y++ I   C+DG   EA  L  +M+K G++P+V  Y IL
Sbjct: 753 TYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTIL 792



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 198/376 (52%), Gaps = 1/376 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF +L++   +AG L  A  V +++ + G    +     L++   + GDI  A  +F+++
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G +    T  ++     ++G      +F ++M+  G+  +L  Y+ ++  YC  G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM-AGISPNVITYNK 355
               KL   ++ + ++ NVVTY  L+ G CKE R++EAE+++ ++K    I  + + Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C  G  + A R+ +++   G   ++  YN +I  + K G       L++  E RG
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           +   E +Y  L+D + R   M KAFE   +M ++GF+    TY  L++G C +G + +A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           KL+  M +  + PN++  + ++ G+ K G + +AL L  E   +GL  N+ + ++ I  L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 536 CQDGKWPEAEVLLNQM 551
           C++ +  EAE L ++M
Sbjct: 456 CKNRRMTEAEELFHRM 471



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 220/478 (46%), Gaps = 27/478 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++        D AL  +  ML  GV P   + ++LL    K+   ++    + E  
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +V +   +I G C+   + +A E+ ++++E     + + Y +LIDG CK GD+ 
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +  ++  LG V +   +   I GLF         +   +M   G+SP+  TY  LI
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM------ 341
             +C EG + +   L+ EM  + +  N+   + L+    +E +V EA  +L ++      
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI 617

Query: 342 -----------KMAGISPNV---------ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
                      K+A I  ++         I +N +I G C  G    A  LF  LK  G 
Sbjct: 618 QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGF 677

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P   TY+ LI   S +G+  +A  L  EM    +TP+ VTY  LI    +S ++ +A  
Sbjct: 678 IPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVS 737

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +++ +Q  G SP+  TY  LI G C  GN  EA KL   M +  ++P    Y ++I G C
Sbjct: 738 LFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLC 797

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            +G    A++LL +M E  + PN  +Y + I    + G       L N+M   GL P+
Sbjct: 798 TQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 206/427 (48%), Gaps = 2/427 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +++D + +   ++ A    H +   G+ P   T+  L+    K    ++      E  
Sbjct: 202 YHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIK 261

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+ +D  ++G LI G C+ G +  A  V +++ + G   N+ +Y ++I+G CK G +
Sbjct: 262 ENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
              + L +     G+   +++Y  L+ G  + G     FE  + M  NG + +  TYN L
Sbjct: 322 GEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTL 381

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++ +C+ G + +  KL+  M  R V  N ++ +TL+ G  K  + ++A  L  +    G+
Sbjct: 382 LNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGL 441

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           + NV+T N +I+G C      +A  LF+++K        +TY  LI  + K G+   A+ 
Sbjct: 442 ARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQ 501

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  EME  G  PS   +   I     +    K  ++   M   G SP+  TYG LI G C
Sbjct: 502 IRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWC 561

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+ +A  L+  M E  L+PN  + ++++  + +EG    A  +L ++ +  ++ + +
Sbjct: 562 KEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCS 621

Query: 527 SYSSTIG 533
           + +  IG
Sbjct: 622 ASTLNIG 628



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 203/443 (45%), Gaps = 58/443 (13%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +I+G   +   T    L H  + +    + +T    Y ++ID + K     +A     +M
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLT----YRTLIDGYCKLGDLGRATQIRIEM 506

Query: 133 LDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVEL-------DVYSFGILIK 183
            + G  P    FNS +  +F+ K             N  +VE+       +  ++G LI 
Sbjct: 507 ENLGFVPSVEMFNSFITGLFIAKQSG--------KVNDIRVEMSAKGLSPNTVTYGALIA 558

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV- 242
           G C+ G+L+ A  +  ++ E G  PN+ I + L+    + G ++ A ++ +K+ +  ++ 
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQ 618

Query: 243 -------------------------ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
                                    + +  + ++I GL K G   D    +E +++ G  
Sbjct: 619 DCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFI 678

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P  +TY+ LIH     G +   F L DEM    +  N+VTYN+LI GLCK   V  A  L
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++++  GISPN ITYN LIDG C  G T +AF+L  ++   G  P+V TY +LI     
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT 798

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  L+ +M E  + P+ +TY  LI  + R  +M+   ++Y+ M   G  P  +T
Sbjct: 799 QGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858

Query: 458 YGVLIHGLCMKGNMKEASKLFNS 480
                      G++K+A  + NS
Sbjct: 859 -----------GHVKQAEPVVNS 870



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 134/260 (51%), Gaps = 1/260 (0%)

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           +++ + +  +++ L+       ++++A  + D+M  AG    + + N+L++    AG+  
Sbjct: 87  YKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIG 146

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  +F Q++  G  P   T  ++ +A+ + G    A+D ++EMEE G+  + V Y  ++
Sbjct: 147 TAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVM 206

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KL 486
           D + R    E A ++   +Q  G SP+V TY +L+ G C +G M+EA K+   + E  K+
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKI 266

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
             ++V Y  +I GYC+ G    A R+  EM + G+  N+  Y++ I   C+ G+  E E 
Sbjct: 267 VIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEK 326

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           LL      G+      YN L
Sbjct: 327 LLQANEYRGVNLDEYSYNTL 346



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%)

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S  ++ +L+ +   +  ++ A  ++  M K+G    + +   L++ L   G++  A  +F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M      P+D    +M   YC++G    A   L EM E GL  N+ +Y + +   C+ 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+   A  LL+ +   GL P+V  Y +L + 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKG 243


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 196/380 (51%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +   LIKG C  G++ KA    +QL   GF  + V Y +LI+G CK G+ +    L RK+
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL 188

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +      Y  +I  L KN L  D  + Y +M + G+SP + TY  LIH +C  G +
Sbjct: 189 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL 248

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E F L +EM+ + +  NV T+N LI  L KE +++EA+ LL  M  A I P+V TYN L
Sbjct: 249 KEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSL 308

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG+    E   A  +F  +   G +P V  Y  +I    K      A  L  EM+ + +
Sbjct: 309 IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTY  LID   ++  +E+A  +   M++ G  PDVY+Y +L+ GLC  G +++A +
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE 428

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  +       N   Y ++I   CK G    AL L  +M +KG +P+  ++   I  L 
Sbjct: 429 IFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALF 488

Query: 537 QDGKWPEAEVLLNQMLKLGL 556
           +  +  +AE +L +M+  GL
Sbjct: 489 EKDENDKAEKILREMIARGL 508



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 213/443 (48%), Gaps = 36/443 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A+  F+ ML     P +  FN++L  ++ +  +      F +     +  D+ +  ILI 
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C    +  AF V   + + GF PN +   +LI G C  G+I++A              
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALY------------ 148

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                       F + L   GF      QL+ VS     Y  LI+  C  G+     +L 
Sbjct: 149 ------------FHDQLVAQGF------QLDQVS-----YGTLINGLCKTGETKAVARLL 185

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            ++    V  +VV YNT+I  LCK   + +A  +  +M + GISP+V+TY  LI GFC  
Sbjct: 186 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 245

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +AF L N++K    +P+V T+N+LI A SK G  K A  L+  M +  I P   TY
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LID +   D+++ A  ++  M + G +PDV  Y  +I+GLC    + EA  LF  M  
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + P+ V YN +I G CK  +  RA+ L   M E+G+ P++ SY+  +  LC+ G+  +
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A+ +  ++L  G   +V  Y +L
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVL 448



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+++ D+A+  F +M    + P   T+NSL+  + K+   ++        +
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + ++ DVYS+ IL+ G C++G L  A E+  +L   G+  NV  YT LI+  CK G  +
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFD 459

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            A  L  K+ + G +    T+ ++I  LF+
Sbjct: 460 EALDLKSKMEDKGCMPDAVTFDIIIRALFE 489


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 245/464 (52%), Gaps = 6/464 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +++ A  K+   D+A     +M+  G  P + TF++L+  + K  S ++ +    +  
Sbjct: 129 YTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 188

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     D     I+ + C +   +  A +VL  +   GF+P V+++  +I+G CK  D+
Sbjct: 189 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 248

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L   + E G V    T+T+LI GL K     +  +  EKM + G SP++ TY+ +
Sbjct: 249 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTV 308

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C +G+V + ++LF  M  R    NVVT+N LI GLCK  R++EA +L  +M+  G 
Sbjct: 309 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 368

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS-VVTYNVLIRAFSKAGNSKMAS 405
           +P++ITYN LIDG C + + D+AF+LF  +  +G S +  VTY+ L   ++  G    A 
Sbjct: 369 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 428

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   + ++G +P   TYT LI  + ++    +  E+   M   GF P V T   ++ GL
Sbjct: 429 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 488

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM---NEKGLV 522
               + + A +LF+SM       + ++YN+++ G  +     +AL +L ++    ++   
Sbjct: 489 FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFN 548

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+ ++  + +  LCQ GK  +A+ LL++M + G   +VS YN L
Sbjct: 549 PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRL 592



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 205/398 (51%), Gaps = 8/398 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  L+   C+AG  ++A  +L ++   G +P+ V +++LIDG CK G  E+A  + 
Sbjct: 125 DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 184

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ----LNGVSPSLYTYNCLIHE 289
             + + G+  +   +  +I  L     + +  E   K+       G +P++  +N +I+ 
Sbjct: 185 EDVIQRGMGNSDAAFETIIQRLCN---KYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C    +   +KL + M  +    NV T+  LI GLCK  RV EA++LL++M M G SPN
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY+ +I+G C  G+ D A+ LF  ++     P+VVT+N+LI    KA   + A  L  
Sbjct: 302 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 361

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS-PDVYTYGVLIHGLCMK 468
            M E G  P  +TY  LID   +S  +++AF+++  + +SG S  +  TY  L HG    
Sbjct: 362 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 421

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M +A ++F+ + +    P+   Y  +I  YCK   +   + L+ EM  KG  P + + 
Sbjct: 422 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S+ +G L +      A  L + M   G      +YN++
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLV 519



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 255/547 (46%), Gaps = 35/547 (6%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +AF +     ++G+ ++  +   I++ L +K +S   A+        + G + +  FTP 
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK-------VLGVVIAKGFTPT 231

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L+ +L                   +I+   K++  D A      M++ G  P   TF  
Sbjct: 232 VLMFNL-------------------VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272

Query: 147 LLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           L+  + K+    +      +     C    +V ++  +I G C+ G ++ A+E+   +E 
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSP--NVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
               PNVV +  LIDG CK   IE A+ L+ ++ E G      TY  LI GL K+    +
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 264 GFEFYEKMQLNGVSPS-LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            F+ ++ +  +GVS +   TY+ L H Y   G++++  ++F  +  +  + ++ TY +LI
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              CK  R  E   L+++M   G  P V T + ++ G  +   T++A +LF+ + + G +
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 510

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREM---EERGITPSEVTYTILIDSFVRSDDMEKA 439
              + YN+++   ++A     A  ++ ++    +R   PS      L++S  +    + A
Sbjct: 511 DDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDA 570

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            ++   M + GF+  V +Y  L+ GL       EA+++F +M      P     N++I  
Sbjct: 571 KQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 630

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            C       A  L+  M++ G  P+I + ++ IG  C+ G+   A  LL +M + GL+P+
Sbjct: 631 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690

Query: 560 VSLYNIL 566
            + +++L
Sbjct: 691 DTTHDLL 697



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 197/442 (44%), Gaps = 38/442 (8%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           LFF   R +V  +V+S    +   C      +A  +          PN   Y  LI G  
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             GD++ A  L  ++   G       +T L+ GL   G   +  E +  M  +  +P + 
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVM 127

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK------EMRVQE-- 333
           TY  L+H  C  GK  E   +  EM  +  A + VT++TLI GLCK        RV E  
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 334 ----------------------------AERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
                                       A ++L  +   G +P V+ +N +I+GFC A +
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A++L   +   G  P+V T+ +LI    KA     A  L+ +M   G +P+ VTY+ 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I+   +   ++ A+E++ LM++    P+V T+ +LI GLC    ++EA +L++ M ET 
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIASYSSTIGVLCQDGKWPEA 544
             P+ + YN +I G CK      A +L   + E G+   N  +YS+        G+  +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             + + ++  G  P ++ Y  L
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSL 449



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 43/256 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  + K+  + + +    +M   G  PR NT +++L  + +    ++    F    
Sbjct: 446 YTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMA 505

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGFSPNVVIYTSLIDGCCKNG 224
            +    D   + ++++G   A   +KA  VL Q+    +  F+P+     +L++  C+ G
Sbjct: 506 ARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVG 565

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK---------------------- 262
             + AK L  K+ E G  A   +Y  L+ GL +  LQ+                      
Sbjct: 566 KTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSR--LQRWDEATQVFEAMVSAGPAPEIST 623

Query: 263 ---------------DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                          D +E  ++M   G  P + T N LI  YC  G+     KL +EM 
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683

Query: 308 HREVACNVVTYNTLIC 323
              +  N  T++ L C
Sbjct: 684 EAGLEPNDTTHDLLEC 699



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 27/229 (11%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS-HAAAQTLILKIISGRITSSSFTP 85
           +A  LF+  + +G        ++I  L++  M+  S H  A  ++ ++I  R     F P
Sbjct: 496 RAIQLFDSMAARGCTDD----ALIYNLVVEGMARASKHDKALAVLEQVIDKR--DRKFNP 549

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                        SS+ V      ++++++  +   +D A    H+M + G     +++N
Sbjct: 550 -------------SSSAV------DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYN 590

Query: 146 SLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
            LL  + +   +D+   +F +        ++ +  ++I   C A  ++ A+E++ ++ ++
Sbjct: 591 RLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL 650

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           G  P++    +LI G CK+G  + A+ L  ++ E GL     T+ +L C
Sbjct: 651 GCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 239/499 (47%), Gaps = 37/499 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++   K+ +  +A    ++M D G+ P   T+  L+  + K    D         R
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V + VY +  LI  CC+  DL+ A   L+++ E+G +PN   Y+ +I G C+ GD+ 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L RK+ E G+    +T+T LI G  K     +    + KM  + + P+  T+N +I
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC  G + + F+L+D+M  R +  +  TY +LI GLC      +A+  +  ++     
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSV 579

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N  +   L+ GFC  G   +A+ ++N++   G    ++++ +++ A  K  +S+ +  L
Sbjct: 580 LNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVL 639

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC- 466
            REM+E+G+ P  V +T +I+ + +  +M +A   +  M   G  P+  TY  L++ LC 
Sbjct: 640 FREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCK 699

Query: 467 ----------------------------------MKGNMKEASKLFNSMWETKLEPNDVV 492
                                              +GN++ A  L+ +M +  L  N V 
Sbjct: 700 SWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLA-NIVS 758

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N +I G+CK G    A+ L+    E G  P+  SYS+ I  LC+ G   EA  L N+ML
Sbjct: 759 VNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEML 818

Query: 553 KLGLKPSVSLYNILYRAKN 571
             G+KP +  YNIL R  N
Sbjct: 819 YKGVKPDIVAYNILIRWCN 837



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 204/413 (49%), Gaps = 2/413 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCE 187
            H  L +G+ P  +T + +L  ++K   F     LF       V LD Y +   I+  CE
Sbjct: 150 LHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCE 209

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             +L+ A  ++ ++++ G   + V Y  LI G CKN  +  A  +   +   G+ A + T
Sbjct: 210 VRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVT 269

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
              L+ G  +        E    M   G  PS    + ++     +G+V E F+L  ++ 
Sbjct: 270 CRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLG 329

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N+  YN L+  +CK     EA+RL+++M   G+ PN +TY  LI   C  G  D
Sbjct: 330 ELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMD 389

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  + ++++  G   +V  YN LI    K  +  MA   + EM E G+TP+  +Y+ +I
Sbjct: 390 DALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVI 449

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R  D+  A E++  M + G + + YT+  LI+G C    M EAS+LFN M E+ LE
Sbjct: 450 AGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLE 509

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC-QDG 539
           PN+V +N +I GYC  G+  +A +L  +M  +GL P+  +Y S I  LC  DG
Sbjct: 510 PNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG 562



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 227/528 (42%), Gaps = 71/528 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y + I A+ + R  D A     +M D G +  +  +N L+  + K+    +     +  
Sbjct: 199 VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSM 258

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + V  D  +   L+ G C   +L+ A E+   +  +GF P+    + ++DG  K G +
Sbjct: 259 LARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRV 318

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L  ++GEL +V     Y  L+  + KNG+  +      +M   G+ P+  TY  L
Sbjct: 319 EEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAIL 378

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH  C  G + +   + D MR + V   V  YN+LI   CK+  +  A   L +M   G+
Sbjct: 379 IHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGL 438

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  +Y+ +I G C  G+   A  L  ++   G + +  T+  LI  F KA     AS 
Sbjct: 439 TPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASR 498

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI---- 462
           L  +M E  + P+EVT+  +I+ +    D+ KAF++Y  M   G +PD YTY  LI    
Sbjct: 499 LFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLC 558

Query: 463 -------------------------------HGLCMKGNMKEASKLFN--SMWETKLE-- 487
                                          HG C +G + EA  ++N  +MW  KL+  
Sbjct: 559 LTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLI 618

Query: 488 -------------------------------PNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
                                          P++V +  MI  Y KEGN  +AL    EM
Sbjct: 619 SFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEM 678

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              G +PN  +Y++ +  LC+      AE+L  +ML     P+   +N
Sbjct: 679 IADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFN 726



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 202/392 (51%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +LI G C+   + +A +V N +   G + + V   +L+ G C+  +++ A  +   + 
Sbjct: 235 YNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMA 294

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
            LG V ++   + ++ GL K G  ++ F    ++    + P+++ YN L++  C  G  S
Sbjct: 295 RLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFS 354

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  +L +EM  + +  N VTY  LI  LCK   + +A  +LD+M+  G+   V  YN LI
Sbjct: 355 EADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLI 414

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           +  C   + D A    +++   G +P+  +Y+ +I    + G+   A +L R+M E+G+ 
Sbjct: 415 NCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVA 474

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
            +  T+T LI+ F ++  M++A  +++ M +S   P+  T+  +I G C+ G++++A +L
Sbjct: 475 WNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQL 534

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           ++ M    L P++  Y  +I G C    + +A   + ++     V N  S ++ +   C+
Sbjct: 535 YDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCR 594

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G+  EA  + N+M   G K  +  + I+  A
Sbjct: 595 EGRLTEAYHVWNEMAMWGGKLDLISFTIIVYA 626



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 222/495 (44%), Gaps = 76/495 (15%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I +  K  + D AL    +M + GVR     +NSL+    K    D    F SE  
Sbjct: 375 YAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSE-- 432

Query: 169 CKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             VE+    +  S+  +I G C  GDL+ A E+  ++ E G + N   +T+LI+G CK  
Sbjct: 433 -MVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAK 491

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY- 283
            ++ A  LF K+ E  L   + T+  +I G    G  +  F+ Y++M   G++P  YTY 
Sbjct: 492 KMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYR 551

Query: 284 ------------------------NC----------LIHEYCNEGKVSEGFKLFDEMRHR 309
                                   NC          L+H +C EG+++E + +++EM   
Sbjct: 552 SLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMW 611

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +++++  ++    K+   +++  L  +MK  G+ P+ + +  +I+ +   G   +A
Sbjct: 612 GGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQA 671

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
              ++++ ++G  P+ VTY  L+    K+ +   A  L +EM      P+  T+   +D 
Sbjct: 672 LNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDY 731

Query: 430 FVRSDDMEKAFEMYSLM----------------------------------QKSGFSPDV 455
           F    ++E A ++Y  M                                   ++GF PD 
Sbjct: 732 FATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            +Y  +IH LC KG++ EA +L+N M    ++P+ V YN++I      G S + L +  +
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYID 851

Query: 516 MNEKGLVPNIASYSS 530
           M +KG+ PN  ++ +
Sbjct: 852 MVKKGVQPNWHTHRA 866



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 180/392 (45%), Gaps = 2/392 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I+   K++  D+A   F++M +S + P   TFN+++          K +  + +  
Sbjct: 480 FTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM 539

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C+ +  D Y++  LI G C     +KA E +  LE      N    T+L+ G C+ G + 
Sbjct: 540 CRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLT 599

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  ++ ++   G      ++T+++    K    +     + +M+  GV P    + C+I
Sbjct: 600 EAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMI 659

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + Y  EG + +    +DEM       N VTY  L+  LCK   +  AE L  +M  +   
Sbjct: 660 NMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFL 719

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  T+N  +D F   G  + A  L+  +   G   ++V+ N LI+ F K G  + A DL
Sbjct: 720 PNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDL 778

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +    E G  P  ++Y+ +I    +  D+ +A E+++ M   G  PD+  Y +LI    +
Sbjct: 779 ISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNI 838

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            G   +   ++  M +  ++PN   +  +  G
Sbjct: 839 HGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 177/382 (46%), Gaps = 48/382 (12%)

Query: 101 NPVTKSRL------YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVI 152
           N +T+S L      + ++I+ +       +A   + QM+  G+ P + T+ SL+  + + 
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLT 560

Query: 153 KSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
              S  K ++   EN C V L+ +S   L+ G C  G L +A+ V N++   G   +++ 
Sbjct: 561 DGASKAKEFVADLENNCSV-LNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLIS 619

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELG------------------------------LV 242
           +T ++    K  D E++ +LFR++ E G                              ++
Sbjct: 620 FTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMI 679

Query: 243 ATQH-----TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           A  H     TYT L+  L K+          ++M  +   P+ YT+NC +  +  EG + 
Sbjct: 680 ADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLE 739

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L+  M    +A N+V+ NTLI G CK  ++QEA  L+ +    G  P+ I+Y+ +I
Sbjct: 740 TAKDLYFAMLQGFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVI 798

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C  G+ ++A  L+N++   G  P +V YN+LIR  +  G S     +  +M ++G+ 
Sbjct: 799 HELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQ 858

Query: 418 PSEVTYTILIDSFVRSDDMEKA 439
           P+  T+  L   FV +  M K 
Sbjct: 859 PNWHTHRAL---FVGTSLMSKG 877


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 229/458 (50%), Gaps = 13/458 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S++D   +    D+A     +M   GV P   TF++L+     +   D+    + E  
Sbjct: 84  YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 143

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE---EMGFSPNVVIYTSLIDGCCK 222
            + C+  LD  S   LI G C    + +A+E+  ++E   +  + P+VV YT+LIDG CK
Sbjct: 144 TSSCR--LDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCK 201

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +G++E+A  +   +     V    TY+ L+ GL K G      + + +M   G  P++ T
Sbjct: 202 SGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVT 261

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  LIH  C   KV     L DEM       + V+YN L+ G C+  R++EA++L  +M 
Sbjct: 262 YTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMA 321

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKA-FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                P+ ITY  L+ GFC+A   ++A F L N   + G  P VVTY++++  +S+A   
Sbjct: 322 AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF 381

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A++ ++EM  R + P+ VTY+ LID   ++  +  A E+   + K    PDV TY ++
Sbjct: 382 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIV 437

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I GLC     +EA  L   M   ++EP+   +N +I   C+ G+   A +LL  M   GL
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            P + +Y++ +    + G+   A  L   M +   K S
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSS 535



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 209/396 (52%), Gaps = 6/396 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEE-MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           ++ +++ G C+A   +KA+EVL ++ +    +P++V Y+++I+G CK G+++RA  + R+
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 236 -IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +   G+     TYT ++ GL ++G      E   +M+L GV P  +T++ LI  +CN  
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM---AGISPNVI 351
           KV E  KL+ E+       + V+ + LI GLC+E R+ EA  L  +M+M       P+V+
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  LIDGFC +G  +KA ++   ++     P+VVTY+ L+    KAG+   A DL R M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +G  P+ VTYT LI     +  ++ A  +   M  +    D  +Y  L+ G C  G +
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSS 530
           +EA +LF  M      P+ + Y  ++ G+C       A  LL  M    G+ P++ +YS 
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +    +  ++ EA   + +M+   + P+   Y+ L
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 222/437 (50%), Gaps = 11/437 (2%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGILIKGCCEAGDLNKA 194
           V P   T+N ++  + K+    K +    E R    V  D+ ++  +I G C+ G++++A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 195 FEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
            E+L ++    G +P+VV YTS++DG C++G ++RA  + R++   G+   + T++ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G        +  + Y+++  +       + + LI   C E ++ E ++LF EM  RE   
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 314 ---NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +VVTY  LI G CK   +++A ++L  M+     PNV+TY+ L+ G C AG+ D+A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF ++ S G  P+VVTY  LI     A     A  L+ EM         V+Y  L+D +
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEPN 489
            R   +E+A +++  M      PD  TY  L+ G C    ++EA  L  +M     ++P+
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y++++ GY +      A   + EM  + + PN  +YSS I  LC+ G+   A     
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA----M 420

Query: 550 QMLKLGLKPSVSLYNIL 566
           ++LK   KP V  Y I+
Sbjct: 421 EVLKNVDKPDVVTYTIV 437



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 232/498 (46%), Gaps = 38/498 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           R Y  +++   K+RL+ +A     +M D   V P   T+++++    K    D+      
Sbjct: 10  RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69

Query: 166 E--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           E   R  +  DV ++  ++ G C  G +++A E++ +++  G  P+   +++LI G C  
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSL 280
             ++ A  L+++I          + + LI GL +     + +E +++M++       P +
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +C  G + +  K+   M  R+   NVVTY++L+ GLCK   + +A  L  +
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  PNV+TY  LI G C A + D A  L +++ +       V+YN L+  + + G 
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA-FEMYSLMQKSGFSPDVYTYG 459
            + A  L +EM  +   P  +TYT L+  F  +  +E+A F + ++   +G  PDV TY 
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN-------------- 505
           +++ G        EA++    M    + PN V Y+ +I G CK G               
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP 429

Query: 506 -----------------SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
                            +  AL LL EM  K + P++ +++S IG LC+ G   EA  LL
Sbjct: 430 DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489

Query: 549 NQMLKLGLKPSVSLYNIL 566
             M   GL+P +  Y  L
Sbjct: 490 VAMAAHGLEPGMVTYTTL 507



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 174/329 (52%), Gaps = 5/329 (1%)

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQL-NGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           + TY V++ GL K  L    +E  ++M+    V+P L TY+ +I+ +C +G++    ++ 
Sbjct: 9   ERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEIL 68

Query: 304 DEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            EM  R+ +A +VVTY +++ GLC++ ++  A  ++ +MK+ G+ P+  T++ LI G+C+
Sbjct: 69  REMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCN 128

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER---GITPS 419
           A + D+A +L+ ++ ++      V+ + LI    +      A +L +EME R      P 
Sbjct: 129 ARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPD 188

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTYT LID F +S ++EKA +M  +M+     P+V TY  L+HGLC  G++ +A  LF 
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 248

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M      PN V Y  +I G C       A  L+ EM       +  SY++ +   C+ G
Sbjct: 249 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLG 308

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           +  EA+ L  +M      P    Y  L R
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVR 337



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 164/383 (42%), Gaps = 40/383 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++    K+   DQAL  F +M   G  P   T+ +L+  +  +   D   L   E  
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286

Query: 169 CKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D  S+  L+ G C  G + +A ++  ++      P+ + YT L+ G C    +E
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346

Query: 228 RAKMLFRKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A+ L   +    G+     TY++++ G  +     +  EF ++M    V+P+  TY+ L
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406

Query: 287 IHEYCNEGKVS-------------------------------EGFKLFDEMRHREVACNV 315
           I   C  G+V+                               E   L +EM ++ V  +V
Sbjct: 407 IDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            T+N++I  LC+   + EA +LL  M   G+ P ++TY  L++GF   G  + A+ LF  
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526

Query: 376 LKSNGQSPSVV-------TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           ++   +  S          ++ LIR   KA     A  +V E+  R   P+E     ++D
Sbjct: 527 MRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 586

Query: 429 SFVRSDDMEKAFEMYSLMQKSGF 451
             +R+   E+A ++ + + K G 
Sbjct: 587 GLLRAGRTEEAGKLINSISKVGL 609


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 225/445 (50%), Gaps = 1/445 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           ++AL  + +M+  G++P   T+++L++ + +     K      E +   +  ++Y++ I 
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I+    A  ++ A+ +  ++++ G  P+V+ YT LID  C  G +++AK L+ K+     
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              + TY  L+    K G  +    F+ +M+++G +P + TY  LI   C  G V   F 
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D M  + +  N+ TYNT+ICGL K  R+ EA  LL+ M+  G+ P   +Y   ID + 
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+  KA   F  +K  G  PS+   N  +   ++ G    A D+  ++ + G++P  V
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY +L+  + ++  ++KA ++ S M   G  PDV     LI+ L   G +  A K+F  +
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
              KL P  V YN+++ G  KEG   +AL L G M E G  PN  +++S +  L ++   
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAV 636

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  +  +M  +   P V  YN +
Sbjct: 637 DLALKMFCRMTMMNCNPDVLTYNTI 661



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 188/360 (52%), Gaps = 1/360 (0%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N+  Y ++       G I RA    RK+ E+G +   ++Y  LI  L   G   +  + Y
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLI-HLLLPGFCNEALKVY 223

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M   G+ PS+ TY+ L+      G   +   L +EM+   +  N+ TY   I  L + 
Sbjct: 224 KRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRA 283

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+ +A  +  +M   G  P+VITY  LID  C AG+ DKA  L+ +++++  SP  VTY
Sbjct: 284 RRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTY 343

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             L+  F K G+ +       EME  G  P  VTYTILI++  +S D+++AF+M  +M  
Sbjct: 344 ITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT 403

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P+++TY  +I GL     + EA +L  +M    ++P    Y + I  Y K G+  +
Sbjct: 404 KGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAK 463

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A+     M ++G++P+IA+ ++++  L + G+  EAE + N + K GL P    YN+L +
Sbjct: 464 AIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMK 523



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 205/398 (51%), Gaps = 9/398 (2%)

Query: 173 LDVYSFG----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           L+ YS+     +L+ G C     N+A +V  ++   G  P++  Y++L+    + GD  +
Sbjct: 199 LNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L  ++  +GL    +TYT+ I  L +     D +  +++M   G  P + TY  LI 
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  GK+ +  +L+ +MR    + + VTY TL+    K   ++  +R  ++M++ G +P
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TY  LI+  C +G+ D+AF + + + + G  P++ TYN +I    KA     A +L+
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             ME  G+ P+  +Y + ID + +S D  KA + +  M+K G  P +      ++ L   
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +FN + +  L P+ V YNM++  Y K G   +A +LL EM  KG  P++   
Sbjct: 494 GRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +S I  L + G+   A  +  ++  L L P+V  YNIL
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNIL 591



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 209/437 (47%), Gaps = 2/437 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y   I A  ++R  D A   F +M D G  P   T+  L+  +  +   DK    + + R
Sbjct: 273 YTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMR 332

Query: 169 CKVE-LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D  ++  L+    + GDL       N++E  G++P+VV YT LI+  CK+GD++
Sbjct: 333 ASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVD 392

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +   +   G+    HTY  +ICGL K     +  E  E M+  GV P+ ++Y   I
Sbjct: 393 RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFI 452

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G  ++    F+ M+ R +  ++   N  +  L +  R+ EAE + + +   G+S
Sbjct: 453 DYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS 512

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TYN L+  +  AG+ DKA +L +++ S G  P V+  N LI    KAG    A  +
Sbjct: 513 PDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKM 572

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ++   + P+ VTY IL+    +   + KA E++  M +SG  P+  T+  L+  L  
Sbjct: 573 FGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              +  A K+F  M      P+ + YN +I+G  +EG    A     +M +K L P+  +
Sbjct: 633 NDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVT 691

Query: 528 YSSTIGVLCQDGKWPEA 544
             + I  + + G+  +A
Sbjct: 692 LCTLIPGVVRHGRVEDA 708



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 227/488 (46%), Gaps = 47/488 (9%)

Query: 124  QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-----DVYSF 178
            +AL  F  M +SG  P + TFNSLL  + K+ + D     F    C++ +     DV ++
Sbjct: 603  KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMF----CRMTMMNCNPDVLTY 658

Query: 179  GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-- 236
              +I G    G ++ AF   +Q+++   SP+ V   +LI G  ++G +E A  +  +   
Sbjct: 659  NTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVH 717

Query: 237  -----------GEL-----------------------GLVATQHTYTVLICGLFKNGLQK 262
                       GEL                        +    H    LI  L K     
Sbjct: 718  QACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKAL 777

Query: 263  DGFEFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            D    ++K   N G+ P+L +YNCL+          +  +LF++M+      N  TYN L
Sbjct: 778  DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 322  ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
            +    K  R+ +   L  +M+  G  PN IT+N +I     +   +KA  L+ +L S   
Sbjct: 838  LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897

Query: 382  SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            SP+  TY  LI    KAG S+ A  +  EM + G  P+ V Y ILI+ F +S +++ A E
Sbjct: 898  SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957

Query: 442  MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            ++  M K G  PD+ +Y +L+  LC+ G + EA + F  +  T L+P+ V YN +I G  
Sbjct: 958  LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017

Query: 502  KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            K      AL L  EM  +G+ P++ +Y++ I  L   GK   A  +  ++  +GL+PSV 
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077

Query: 562  LYNILYRA 569
             YN L R 
Sbjct: 1078 TYNALIRG 1085



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 224/492 (45%), Gaps = 37/492 (7%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            + S++D   K+   D AL  F +M      P   T+N+++  +I+    D  + FF + +
Sbjct: 623  FNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL--------------------------- 201
              +  D  +   LI G    G +  A +V+ +                            
Sbjct: 683  KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIE 742

Query: 202  EEMGFSPNVV---------IYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQHTYTVL 251
            E + F+  +V         +   LI   CK      A+ +F K  + LG+  T  +Y  L
Sbjct: 743  EAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCL 802

Query: 252  ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            + GL  +   +   E +E M+  G  P+ +TYN L+  +    ++++ + L+ EMR R  
Sbjct: 803  MDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGC 862

Query: 312  ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
              N +T+N +I  L K   + +A  L  ++     SP   TY  LIDG   AG +++A +
Sbjct: 863  EPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMK 922

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            +F ++   G  P+ V YN+LI  F K+G    A +L ++M + GI P   +YTIL++   
Sbjct: 923  IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             +  +++A + +  ++ +G  PD  +Y  +I+GL     + EA  LF+ M    + P+  
Sbjct: 983  ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042

Query: 492  VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
             YN +I      G    A+++  E+   GL P++ +Y++ I      G   +A  +  +M
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102

Query: 552  LKLGLKPSVSLY 563
            + +G  P+   +
Sbjct: 1103 MVVGCSPNTETF 1114



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 173/333 (51%), Gaps = 1/333 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y  ++D  L S  +++AL  F  M  +G  P + T+N LL    KS   +K +  +SE R
Sbjct: 799  YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             +  E +  +  I+I    ++ +LNKA ++  +L    FSP    Y  LIDG  K G  E
Sbjct: 859  SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +A  +F ++ + G       Y +LI G  K+G      E ++KM   G+ P L +Y  L+
Sbjct: 919  QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               C  G++ E  + F+E++   +  + V+YN +I GL K  R+ EA  L  +MK  GIS
Sbjct: 979  ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            P++ TYN LI     AG+ D A +++ +L+  G  PSV TYN LIR  S +GN   A  +
Sbjct: 1039 PDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSV 1098

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             ++M   G +P+  T+  L + + R+  +   F
Sbjct: 1099 FKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 146/328 (44%)

Query: 177  SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            S+  L+ G   +    KA E+   ++  G  PN   Y  L+D   K+  I +   L+ ++
Sbjct: 798  SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857

Query: 237  GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               G      T+ ++I  L K+       + Y ++     SP+  TY  LI      G+ 
Sbjct: 858  RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917

Query: 297  SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
             +  K+F+EM       N V YN LI G  K   +  A  L  +M   GI P++ +Y  L
Sbjct: 918  EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977

Query: 357  IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
            ++  C  G  D+A + F +LK  G  P  V+YN +I    K+     A  L  EM+ RGI
Sbjct: 978  VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037

Query: 417  TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            +P   TY  LI     +  ++ A +MY  +Q  G  P V+TY  LI G  + GN  +A  
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 477  LFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            +F  M      PN   +  +   Y + G
Sbjct: 1098 VFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 34/296 (11%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID--- 358
           +FD M+ + +  N+ TY T+   L  +  +  A   L +M   G   N  +YN LI    
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212

Query: 359 -GFCDA------------------------------GETDKAFRLFNQLKSNGQSPSVVT 387
            GFC+                               G+T K   L  ++KS G  P++ T
Sbjct: 213 PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYT 272

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y + IRA  +A     A  + +EM++ G  P  +TYT+LID+   +  ++KA E+Y  M+
Sbjct: 273 YTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMR 332

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            S  SPD  TY  L+      G+++   + +N M      P+ V Y ++I   CK G+  
Sbjct: 333 ASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVD 392

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           RA  +L  M  KG+ PN+ +Y++ I  L +  +  EA  LL  M  LG+KP+   Y
Sbjct: 393 RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 41/294 (13%)

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           H   ACN      ++  L ++ R+++   + D M+   I  N+ TY  +       G   
Sbjct: 129 HTTDACNY-----MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIG 183

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A     ++   G   +  +YN LI      G    A  + + M   G+ PS  TY+ L+
Sbjct: 184 RAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTYSALM 242

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVY------------------------------- 456
            +  R  D  K   +   M+  G  P++Y                               
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302

Query: 457 ----TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
               TY VLI  LC  G + +A +L+  M  +   P+ V Y  ++  + K G+     R 
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EM   G  P++ +Y+  I  LC+ G    A  +L+ M   G+ P++  YN +
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 203/386 (52%), Gaps = 6/386 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LIKG   + +++KA  V+  LE+ G  P+V  Y ++I G CK   IE AK +  ++   G
Sbjct: 16  LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74

Query: 241 LVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
                 T+ ++I   CG  K  L    FE  E ++ N   P+L TY  LI  Y  EG + 
Sbjct: 75  FSPDVVTHNIMIGTFCGKGKIDLALKVFE--ELLKDNNCKPTLITYTILIEAYILEGGID 132

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KL DEM  R +  +  TYN +  GLCKE +V  A   +  +   G  P+VITYN L+
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL 192

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
               + G+ D+  +  +++ S G  P+VVTY++LI +  + G  + + +LV+ M+E+G+T
Sbjct: 193 RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLT 252

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P    Y  LI +F R   ++ A E    M   GF PD+  Y  ++  LC  GN   A ++
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  + E    PN   YN M+      G+ YRAL ++ +M  KG+ P++ +Y+S I  LC+
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLY 563
           DG   EA  LL  ML    +P++  Y
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSY 398



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 184/379 (48%), Gaps = 1/379 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           DV +  I+I   C  G ++ A +V  +L ++    P ++ YT LI+     G I+ A  L
Sbjct: 78  DVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKL 137

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             ++   GL     TY V+  GL K G     FEF   +   G  P + TYN L+    N
Sbjct: 138 LDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLN 197

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +GK  EG K   E+  R    NVVTY+ LI  LC++ +++E+  L+  MK  G++P+   
Sbjct: 198 QGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC 257

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y+ LI  FC  G+ D A    + +  +G  P +V YN ++ A  K GN   A ++  +++
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD 317

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           E G  P+  +Y  ++ +   S D  +A  M S M   G  PDV TY  LI  LC  G + 
Sbjct: 318 EVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  L   M   + +PN V Y  ++ G CK      A+ +L  M E G  PN  +Y+  I
Sbjct: 378 EAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437

Query: 533 GVLCQDGKWPEAEVLLNQM 551
             +   G   +A  L N +
Sbjct: 438 EGIGFSGSRTQAMELANSL 456



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 198/394 (50%), Gaps = 1/394 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+++  +I G C+A  +  A  VL++++  GFSP+VV +  +I   C  G I+ A  +F
Sbjct: 43  DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102

Query: 234 RKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            ++  +     T  TYT+LI      G   +  +  ++M   G+ P  +TYN +    C 
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EGKV   F+    +  R    +V+TYN L+  L  + +  E E+ + ++   G  PNV+T
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y+ LI   C  G+ +++  L   +K  G +P    Y+ LI AF + G   MA + +  M 
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G  P  V Y  ++ +  ++ + + A E++  + + G  P+V +Y  ++  L   G+  
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRY 342

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A  + + M    ++P+ + YN +I   C++G    A+ LL +M      PNI SY + +
Sbjct: 343 RALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVL 402

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+  +  +A  +L  M++ G +P+ + Y +L
Sbjct: 403 LGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLL 436



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 1/293 (0%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P ++ YN +I  +C   ++     + D M+ +  + +VVT+N +I   C + ++  A ++
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 338 LDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            +++ K     P +ITY  LI+ +   G  D+A +L +++ S G  P   TYNV+ R   
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G    A + VR +  RG  P  +TY IL+ + +     ++  +  S +   G  P+V 
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY +LI  LC  G ++E+  L   M E  L P+   Y+ +I  +C+EG    A+  L  M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              G +P+I +Y++ +  LC++G    A  +  ++ ++G  P+VS YN +  A
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 2/362 (0%)

Query: 123 DQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
           D AL  F ++L D+  +P   T+  L+   I     D+      E   + +E D +++ +
Sbjct: 96  DLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNV 155

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           + +G C+ G +++AFE +  L   G  P+V+ Y  L+      G  +  +    +I   G
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY++LI  L ++G  ++     + M+  G++P  Y Y+ LI  +C EGK+    
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +  D M       ++V YNT++  LCK      A  +  ++   G  PNV +YN ++   
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G+  +A  + +Q+ S G  P V+TYN LI    + G    A  L+ +M      P+ 
Sbjct: 336 WSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNI 395

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+Y  ++    ++  ++ A E+ + M ++G  P+  TY +LI G+   G+  +A +L NS
Sbjct: 396 VSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANS 455

Query: 481 MW 482
           ++
Sbjct: 456 LY 457



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 2/188 (1%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P V+    LI+ F  + N   A+ ++  +E+ G  P    Y  +I  F +++ +E A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYC 501
              M++ GFSPDV T+ ++I   C KG +  A K+F  +  +   +P  + Y ++I  Y 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
            EG    AL+LL EM  +GL P+  +Y+     LC++GK   A   +  +   G KP V 
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 562 LYNILYRA 569
            YNIL RA
Sbjct: 187 TYNILLRA 194



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 2/171 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+ A  K+   D A+  F ++ + G  P  +++N++L  +  S    +     S+  
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQML 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ DV ++  LI   C  G +++A  +L  +    F PN+V Y +++ G CK   I+
Sbjct: 353 SKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRID 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-LNGVS 277
            A  +   + E G    + TYT+LI G+  +G +    E    +  +N +S
Sbjct: 413 DAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAIS 463


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 243/495 (49%), Gaps = 42/495 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I    K++   +A+   + ++  G+     T+ +L++ + K   F+ G     E 
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDE- 321

Query: 168 RCKVELDVY----SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              +EL       +   L++G    G +  AF+++N+++++G  P++ +Y +LI+  CK+
Sbjct: 322 --MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G  + A++LF+++GE GL A   TY++LI    + G       F  KM + G+  ++Y Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+ +C  G +S     FDEM  + +   VV+Y +LI G C + ++ EA RL  +M  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            GI+PN  T+  LI     A     AFRLF+++      P+ VTYNV+I    K GN+  
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L+ +M ++G+ P   TY  LI S   +  + +A +    + +  F  +   Y  L+H
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619

Query: 464 GLCMKGNMKEA-----------------------------------SKLFNSMWETKLEP 488
           G C +G +++A                                     L  +M + +L P
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V+Y  MI GY K G+  +A  +   M ++G  PNI +Y++ I  LC+ G   +AE+L 
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW 739

Query: 549 NQMLKLGLKPSVSLY 563
            +ML     P+   Y
Sbjct: 740 KEMLVSNSTPNHVTY 754



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 228/463 (49%), Gaps = 7/463 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R    +++   K R  D  L  F ++L  G+RP    +    + VI+S    K +    E
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIY----VAVIRSFCELKNFAKAKE 249

Query: 167 NRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
              ++E   L+V  + +LI G C+   + +A E+ N L + G + + V Y +L+ G CK 
Sbjct: 250 MIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKV 309

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            + E    +  ++ ELG V T+   + L+ GL + G   D F+   +++  G  PSL+ Y
Sbjct: 310 QEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVY 369

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+  C +GK  E   LF EM  + +  N VTY+ LI   C+  ++  A   L +M M
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIM 429

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AGI   V  YN LI+G C  G    A   F+++   G  P+VV+Y  LI  +   G    
Sbjct: 430 AGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHE 489

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  EM  +GI P+  T+T LI +  R++ M  AF ++  M +    P+  TY V+I 
Sbjct: 490 AFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIE 549

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C +GN  +A +L N M +  L P+   Y  +I   C  G    A + + +++ +    
Sbjct: 550 GHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL 609

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N   YS+ +   C++G+  +A  +  +M+K G+   +  Y +L
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVL 652



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 231/494 (46%), Gaps = 35/494 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++I++  K    D+A   F +M + G+     T++ L+    +    D    F  + 
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +++ VY +  LI G C+ G+L+ A    +++ + G  P VV YTSLI G C  G +
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++   G+    +T+T LI  LF+     D F  +++M    + P+  TYN +
Sbjct: 488 HEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVM 547

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C EG   + F+L ++M  + +  +  TY  LI  LC   RV EA++ +D +     
Sbjct: 548 IEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHF 607

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             N + Y+ L+ G+C  G    A  +  ++   G    +V Y VLI    K  ++     
Sbjct: 608 KLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFG 667

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L++ M ++ + P +V YT +ID + ++  ++KAF ++ +M   G +P++ TY  LI+ LC
Sbjct: 668 LLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVV---------------------------------- 492
             G M +A  L+  M  +   PN V                                   
Sbjct: 728 KAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVS 787

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN+++ G+CK G    A +LL EM +  + P+  +YS+ I   C+ G    A    + ML
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTML 847

Query: 553 KLGLKPSVSLYNIL 566
             GLKP    YN L
Sbjct: 848 NKGLKPDTLAYNFL 861



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 227/459 (49%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+ H K      A+ +F +M+D G++P   ++ SL+          + +  + E  
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  + Y+F  LI     A  +  AF + +++ E    PN V Y  +I+G CK G+  
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  ++ + GLV   +TY  LI  L   G   +  +F + +       +   Y+ L+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC EG++ +   +  EM  R V  ++V Y  LI G  KE        LL  M    + 
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + Y  +IDG+  AG   KAF +++ +   G +P++VTY  LI    KAG    A  L
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM     TP+ VTY   +D   R   MEKA ++++ M K G   +  +Y +L+ G C 
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCK 797

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA+KL + M +  + P+ + Y+ +I+  C+ GN   A+     M  KGL P+  +
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I   C  G+  +A  L + M++ G+KP+ + +  L
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 209/443 (47%), Gaps = 33/443 (7%)

Query: 157 FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP-------- 208
           FD   +F    +C++   V + G ++ G  +   ++    +  ++  MG  P        
Sbjct: 175 FDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAV 234

Query: 209 -------------------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                                    NVV+Y  LI G CKN  +  A  +   + + GL A
Sbjct: 235 IRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTA 294

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           ++ TY  L+ GL K    + G    ++M   G  P+    + L+     +GKV + F L 
Sbjct: 295 SEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLV 354

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           + ++      ++  YN LI  LCK+ +  EAE L  +M   G+  N +TY+ LID FC  
Sbjct: 355 NRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRR 414

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D A     ++   G   +V  YN LI    K GN   A     EM ++G+ P+ V+Y
Sbjct: 415 GKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSY 474

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T LI  +     + +AF +Y  M   G +P+ YT+  LI  L     M +A +LF+ M E
Sbjct: 475 TSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE 534

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + PN+V YN+MI G+CKEGN+ +A  LL +M +KGLVP+  +Y   I  LC  G+  E
Sbjct: 535 QNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCE 594

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A+  ++ + +   K +   Y+ L
Sbjct: 595 AKKFIDDLHREHFKLNEMCYSAL 617



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 187/430 (43%), Gaps = 43/430 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S+I  +       +A   +H+M   G+ P + TF +L+  + ++      +  F E  
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 167 --NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N    E+   ++ ++I+G C+ G+  KAFE+LNQ+ + G  P+   Y  LI   C  G
Sbjct: 534 EQNMMPNEV---TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS------- 277
            +  AK     +        +  Y+ L+ G  K G  +D      +M   GV        
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650

Query: 278 ----------------------------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                                       P    Y  +I  Y   G V + F ++D M   
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               N+VTY TLI  LCK   + +AE L  +M ++  +PN +TY   +D     G  +KA
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +L N +   G   + V+YN+L+R F K G  + A+ L+ EM +  I P  +TY+ +I  
Sbjct: 771 VQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQ 829

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R  +++ A E +  M   G  PD   Y  LI+G C+ G + +A +L + M    ++PN
Sbjct: 830 CCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPN 889

Query: 490 DVVYNMMIFG 499
              +  +  G
Sbjct: 890 QATHKSLSHG 899



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 33/317 (10%)

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           ++ LI  Y  E ++ +   +F  MR  E+   V T   ++ GL K  RV     L  ++ 
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 343 MAGISP---------------------------------NVITYNKLIDGFCDAGETDKA 369
             GI P                                 NV+ YN LI G C      +A
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEA 280

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             + N L   G + S VTY  L+    K    ++ + ++ EM E G  P+E   + L++ 
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R   +  AF++ + ++K G  P ++ Y  LI+ LC  G   EA  LF  M E  L  N
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           DV Y+++I  +C+ G    A+  LG+M   G+   +  Y+S I   C+ G    A    +
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460

Query: 550 QMLKLGLKPSVSLYNIL 566
           +M+  GLKP+V  Y  L
Sbjct: 461 EMIDKGLKPTVVSYTSL 477



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 1/217 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I G  +AG + KAF + + + + G +PN+V YT+LI+  CK G +++A++L++++    
Sbjct: 687 MIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSN 746

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY   +  L + G  +   + +  M L G+  +  +YN L+  +C  G+V E  
Sbjct: 747 STPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEAT 805

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           KL DEM    +  + +TY+T+I   C+   +  A    D M   G+ P+ + YN LI G 
Sbjct: 806 KLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGC 865

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           C AGE  KAF L + +   G  P+  T+  L    S+
Sbjct: 866 CIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 2/225 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+ID + K+    +A   +  M+D G  P   T+ +L+  + K+   DK  L + E 
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742

Query: 168 RCKVELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                   + ++   +      G + KA ++ N + + G   N V Y  L+ G CK G +
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRV 801

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  L  ++ +  +     TY+ +I    + G      EF++ M   G+ P    YN L
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           I+  C  G++ + F+L D+M  R V  N  T+ +L  G  ++  +
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 56/245 (22%)

Query: 369 AFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-ITPSEV----- 421
           A R FN L  +   + S +++ +LI A   A     AS L++ +  RG + P EV     
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 422 ------------TYTILIDSFVRSDDMEKAFEMYSLMQKS-------------------- 449
                        + +LI S+V+   M  +  ++ LM++                     
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 450 ---------------GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
                          G  PD+Y Y  +I   C   N  +A ++   M  + L  N VVYN
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYN 265

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I G CK    + A+ +   + +KGL  +  +Y + +  LC+  ++     ++++M++L
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL 325

Query: 555 GLKPS 559
           G  P+
Sbjct: 326 GFVPT 330


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 235/505 (46%), Gaps = 71/505 (14%)

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKG 184
           L  F +M+ +G+ P     N +L  +       K   ++    +  ++  V ++  ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G +++A E+L++++E G  PN V Y  L++G  K G++E+AK L  ++   GL  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKM-----------------------QLNGV----- 276
            +TY  LI G  + GL  + F+  E+M                       Q+ GV     
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 277 -------SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
                  +P + ++N L++ YC  G +SE F LFDE++ R++   V+TYNTLI GLC   
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS------- 382
            +  A RL  +M   G+ P++ TY  L++G    G    A   FN++ S G         
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 383 ----------------------------PSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
                                       P V+TYNV + A  + GN + A DL+  M   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  VTYT +I+ FV++  + KA E+++ M   G +P V TY VLIH    K  +  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
              F+ M E  +  N + YN +I G C       A +   EM EKG++PN  SY+  I  
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPS 559
            C  G W EA  L  +ML   ++P 
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 194/379 (51%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+KA  V   +E+ G  P VV Y +++D  CK G +++A  L  ++ E G      TY V
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ GL K G  +      E+M  +G++ S YTYN LI+ +C +G   E F L +EM +R 
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               + TYNTL+ GLCK ++V         M  +  +P+++++N L+ G+C  G   +AF
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF++LK     P+V+TYN LI      G    A  L +EM ++G+ P   TYTIL++  
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +  A   ++ M   G  PD + Y   I G     +   A  +   M      P+ 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + YN+ +   C++GN   A  LL  M   GL+P+  +Y+S I    ++G   +A  + N+
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 551 MLKLGLKPSVSLYNILYRA 569
           ML  G+ PSV  Y +L  A
Sbjct: 556 MLSKGVAPSVVTYTVLIHA 574



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 215/466 (46%), Gaps = 36/466 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +++D++ K    DQAL    +M + G  P   T+N L+  + K    ++      E  
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE------------------------- 202
              + +  Y++  LI G C+ G   +AF+++ ++                          
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337

Query: 203 ----------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                     +  F+P++V + SL+ G C+ G I  A +LF ++    LV T  TY  LI
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL   G         ++M   G+ P ++TY  L++     G VS     F+EM  + + 
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +   YNT I G  K      A  + ++M  AG  P+VITYN  +   C  G  ++A  L
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              + S+G  P  VTY  +I  F K G+ + A ++  EM  +G+ PS VTYT+LI +   
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ AF  +S M +     +V TY  +I+GLCM   M EA K F+ M E  + PN   
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           Y ++I   C  G    ALRL  EM ++ + P+  ++S  +  L +D
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 157/355 (44%), Gaps = 36/355 (10%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  ML S   P   +FNSLL    ++    + +L F E +C+ +   V ++  LI G C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A  +  ++ + G  P++  YT L++GC K G +  A+  F ++   GL   +  
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y   I G  K       F   E+M   G  P + TYN  +H  C +G   E   L + M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP------------------- 348
              +  + VTY ++I G  K   +++A  + ++M   G++P                   
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 349 ----------------NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
                           NVITYN +I+G C     D+A++ F++++  G  P+  +Y +LI
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
                 G  + A  L REM +R I P   T+++ + +  R   +     + SL+Q
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 237/476 (49%), Gaps = 32/476 (6%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D A     +M+ SG+ P  +TF  L+  ++KS + D+   FF+  +  +   +V ++  L
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G  +AG L +A EV  +++E   SP+ + Y +LIDG  K G+ + A  LF+++ + GL
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    TY ++I  L K G Q + ++ +  ++  G  P ++TYN LI      G++ +   
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 302 LFDEMRHREVACNV-------------------------------VTYNTLICGLCKEMR 330
           +  EM  +   C +                               +TYNTL+        
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V EA +LL+ MK     P V+TY  L+DG   AG  D+A  L  +++  G  PSVVTY+ 
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+ +F K    + +  L  EM  +G      TY+++I+   +SDD+++A +++  M++ G
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P +  Y  L+  L     +  A ++FN + E+ L P+  VYN+M+ G  K      A 
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +L+  M  + ++P++ +Y+S +  L + G+  EA  +  +M + G +P V  Y  L
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 201/400 (50%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V ++  L+ G  +AG L++A  +L ++E+ G  P+VV Y+SL+    K    E +  LF 
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   G VA   TY+++I  L K+       + + +M+  G+ P L  Y  L+     + 
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+    ++F+E++   +  +   YN ++ GL K  RV EA +L+D MK   I P++ TY 
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+DG   +G  ++AF +F ++   G  P VV Y  L+    K G    A  + R M ++
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P  VTY+ LIDS  +   +E+A+  +      G +P+V  Y  LI     KG +  A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF  M   +  PN V YN ++ G  K G    A +LL EM + G VP++ +Y+  I  
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           + + G   EAE    +M + G+ P V  +  L  +   ++
Sbjct: 923 VGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVD 962



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 40/463 (8%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
            Y +++D   K+   D+A+    +M   G  P   T++SL+    K    ++    F E  
Sbjct: 566  YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            R     DV ++ ++I   C++ D+++A +V  +++E G  P +  Y +L+    K+  I+
Sbjct: 626  RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFK------------------------------ 257
             A  +F ++ E  LV     Y +++ GL K                              
Sbjct: 686  FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 258  NGLQKDG-----FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            +GL K G     F  + KM   G  P +  Y  L+      GK+S    +F  M  +   
Sbjct: 746  DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 313  CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             +VVTY++LI  L KE RV+EA    +     G +PNV  Y+ LID F   G  D+A  L
Sbjct: 806  PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865

Query: 373  FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            F +++     P++VTYN L+   +KAG   +A  L+ EME+ G  P  VTY ILID   +
Sbjct: 866  FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925

Query: 433  SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
               +++A   +  M++ G  PDV T+  LI  L     + EA +LF+SM E    P+ V 
Sbjct: 926  MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985

Query: 493  YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            YN++I    + G  + A  +  EM  KG +P+      TIG++
Sbjct: 986  YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD----GITIGIM 1024



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 230/525 (43%), Gaps = 67/525 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+  +D A   F +M D G+ P   T+N ++  + K+    + W  F + +
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEE------------------------ 203
            +  + DV+++  LI    + G ++K   ++ ++ E                        
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514

Query: 204 ------MGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
                 +GF S   + Y +L+     NG ++ A  L   + +   + T  TYT L+ GL 
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K G   +      +M+  G  PS+ TY+ L+  +    +  E   LFDEM  +    +V 
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY+ +I  LCK   V +A  +  +MK  G+ P +  Y  L+       + D A ++FN+L
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           + +   P    YN+++    K+     A  LV  M+ + I P   TYT L+D   +S  +
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 437 EKAFEMYSLMQKSGFS-----------------------------------PDVYTYGVL 461
           E+AF M++ M + G                                     PDV TY  L
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  L  +G ++EA   F +       PN  VY+ +I  + K+G   RAL L  EM  +  
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            PNI +Y++ +  L + G+   AE LL +M K+G  P +  YNIL
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 245/572 (42%), Gaps = 95/572 (16%)

Query: 28  AFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           A   F WA +Q G  HT  + +++++ L       + A     +++I++           
Sbjct: 165 AKCFFTWAGQQDGYSHTVGTYTLMIKRL-------AGAQETDAVVQILTAMWKEGHRISM 217

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            LL  L + F S++N                       AL  F+QM   G  P +N +N 
Sbjct: 218 HLLTSLLRTFGSTNN--------------------VSGALEIFNQMKSFGCNPSTNMYNF 257

Query: 147 LLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           +L  ++K   +    + F +  + +++ D  +F I +     +G L+ A E + ++ + G
Sbjct: 258 VLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG 317

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
             P V                                   HT+TVLI  L K+G   +  
Sbjct: 318 IDPGV-----------------------------------HTFTVLIDALVKSGNIDEAC 342

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           +F+  M+    SP++ TY  L++     G++ E  ++F EM+    + + + YNTLI GL
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            K      A  L  +MK  G+ PN+ TYN +I     AG   +A++LF+ LK  G  P V
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGIT------------------------PS-- 419
            TYN LI    K G       +++EM E+G                          PS  
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLG 522

Query: 420 -----EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                E+TY  L+ +F+ +  +++A ++  +M+K    P V TY  L+ GL   G + EA
Sbjct: 523 FKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEA 582

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M +   EP+ V Y+ ++  + K      +L L  EM  KG V ++++YS  I  
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+     +A  +  +M + G++P +  Y  L
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTL 674



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 209/451 (46%), Gaps = 58/451 (12%)

Query: 27   KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTP- 85
            ++ SLF+   R+G      + S+++  L       S    Q L    + GR+      P 
Sbjct: 616  ESLSLFDEMVRKGCVADVSTYSLVINCLCK-----SDDVDQALD---VFGRMKEEGMEPL 667

Query: 86   ----RSLLCHLT---------QLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
                ++LL  L          Q+F     S+ V  + +Y  +++  +KS   D+A     
Sbjct: 668  LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD 727

Query: 131  QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
             M +  + P   T+ SLL                                   G  ++G 
Sbjct: 728  SMKNQNILPDLFTYTSLL----------------------------------DGLGKSGR 753

Query: 191  LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            L +AF +  ++ E G  P+VV YTSL+D   K G +  A ++FR + +   V    TY+ 
Sbjct: 754  LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
            LI  L K G  ++ + F+E     G +P++  Y+ LI  +  +G V    +LF+EM+ R+
Sbjct: 814  LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               N+VTYN L+ GL K  R+  AE+LL++M+  G  P+++TYN LIDG    G  D+A 
Sbjct: 874  CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
              F ++K  G  P V+T+  LI +  K      A +L   MEE G  PS VTY +LID  
Sbjct: 934  SYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL 993

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             R+  + +A  ++  M+  G  PD  T G++
Sbjct: 994  GRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 166/363 (45%), Gaps = 8/363 (2%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL-GLVATQHTYTVLICG 254
           E+  QLE + F  N  +   ++       D+  AK  F   G+  G   T  TYT++I  
Sbjct: 135 EMGKQLERLKFKLNPGLVCDVV---VNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKR 191

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L          +    M   G   S++    L+  + +   VS   ++F++M+     CN
Sbjct: 192 LAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK--SFGCN 249

Query: 315 VVT--YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             T  YN ++  L K      A  +  ++    I P+  T+   +  F  +G  D A   
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++  +G  P V T+ VLI A  K+GN   A      M+    +P+ VTYT L++   +
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  +E+A E++  M+++  SPD   Y  LI GL   G    A  LF  M +  L PN   
Sbjct: 370 AGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRT 429

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN+MI    K G    A +L  ++ E+G VP++ +Y++ I VL + G+  +   ++ +M+
Sbjct: 430 YNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489

Query: 553 KLG 555
           + G
Sbjct: 490 EKG 492



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 5/291 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
            Y S++D   KS   ++A   F +M + G  P    + SL+  + K        + F   +
Sbjct: 741  YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 166  ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + RC    DV ++  LI    + G + +A+         G +PNV +Y+SLID   K G 
Sbjct: 801  KKRCVP--DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ++RA  LF ++          TY  L+ GL K G      +  E+M+  G  P L TYN 
Sbjct: 859  VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            LI      G V E    F  M+ + +  +V+T+ +LI  L K  ++ EA  L D M+  G
Sbjct: 919  LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
             +P+V+TYN LID    AG+  +A  +F+++K  G  P  +T  ++ R  S
Sbjct: 979  YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILS 1029



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 72/158 (45%)

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           ++ G + +  TYT++I     + + +   ++ + M K G    ++    L+       N+
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A ++FN M      P+  +YN ++    K G  + A+ + G++ +  + P+  ++   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +    + G+   A   + +M+K G+ P V  + +L  A
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDA 331


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 193/386 (50%), Gaps = 1/386 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  SF  LI GCC  G + +   +L  ++  GF  +    T ++   C+ G       LF
Sbjct: 184 DARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELF 243

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++ E+G       YT  I GL K    K  F   E+M   G+ P++YT+  LI+  C  
Sbjct: 244 RRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKI 303

Query: 294 GKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           G     F+LF ++ +      NV TY  +I G CKE ++  AE LL +M   G++PN  T
Sbjct: 304 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 363

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G C  G  + AF L N+++  G  P++ TYN LI    K G  + A  ++R   
Sbjct: 364 YTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMAN 423

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G+   +VTYT++I    +   +  A ++++ M ++G  PD++TY  LI   C +  M+
Sbjct: 424 NQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQME 483

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           E+ KLF+     +L P    Y  MI GYCK G S  ALR+   M + G   +  +Y + I
Sbjct: 484 ESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALI 543

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKP 558
             LC++ +  EA  L   ML   L P
Sbjct: 544 SGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 195/386 (50%), Gaps = 2/386 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGEL 239
           ++    EAG L +A +++ ++   G    V     ++      G    A+ +F   +   
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           GL+    ++  LI G  ++G  ++       MQ  G      T   ++  +C +G+  + 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            +LF  M       NVV Y   I GLCK   V++A  +L++M   G+ PNV T+  LI+G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 360 FCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
            C  G T++AFRLF +L KS+   P+V TY V+I  + K G    A  L+  M E+G+ P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +  TYT LI    +      AFE+ + M++ GF P++YTY  LI GLC KG ++EA K+ 
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
                  L+ + V Y +MI  +CK+G+   AL L   M E G  P+I +Y++ I   CQ 
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYN 564
            +  E++ L ++ L + L P+   Y 
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYT 505



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 200/417 (47%), Gaps = 13/417 (3%)

Query: 117 LKSRLSDQALFYFHQMLDS-----GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----EN 167
           L++ L   +  Y  ++ D      G+ P + +F +L++   +    ++     +    + 
Sbjct: 156 LRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQG 215

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C   LD  +  ++++  C+ G      E+  ++ EMG  PNVV YT+ IDG CK   ++
Sbjct: 216 FC---LDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVK 272

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCL 286
           +A  +  ++   GL    +T+T LI GL K G  +  F  + K+ + +   P+++TY  +
Sbjct: 273 QAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVM 332

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC EGK++    L   M  + +A N  TY TLI G CKE     A  L+++M+  G 
Sbjct: 333 IGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGF 392

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN+ TYN LIDG C  G+  +A+++     + G     VTY V+I    K G+   A D
Sbjct: 393 QPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALD 452

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M E G  P   TYT LI  + +   ME++ +++         P   TY  +I G C
Sbjct: 453 LFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYC 512

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
             G    A ++F  M +   + + + Y  +I G CKE     A  L   M +K LVP
Sbjct: 513 KVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 175/347 (50%), Gaps = 1/347 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V ++   I G C+   + +AF VL ++   G  PNV  +TSLI+G CK G  ERA  LF
Sbjct: 254 NVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLF 313

Query: 234 RK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            K I         HTYTV+I G  K G          +M   G++P+  TY  LI  +C 
Sbjct: 314 LKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCK 373

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           EG  +  F+L ++MR      N+ TYN LI GLCK+ ++QEA ++L      G+  + +T
Sbjct: 374 EGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVT 433

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  +I   C  G    A  LFN++  NG  P + TY  LI  + +    + +  L  +  
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCL 493

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
              + P++ TYT +I  + +      A  ++  M ++G   D  TYG LI GLC +  ++
Sbjct: 494 AIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLE 553

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           EA  L+  M + +L P +V    + F YC+   +  A+ +L  ++++
Sbjct: 554 EARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKR 600



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 184/417 (44%), Gaps = 41/417 (9%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           K R  D +   F +ML+ G  P    + + +  + K     + +    E   K ++ +VY
Sbjct: 233 KGRFRDVSEL-FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVY 291

Query: 177 SFGILIKGCCEAGDLNKAFEV-LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +   LI G C+ G   +AF + L  ++   + PNV  YT +I G CK G + RA+ML  +
Sbjct: 292 THTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 351

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E GL    +TYT LI G  K G     FE   KM+  G  P++YTYN LI   C +GK
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGK 411

Query: 296 VSEGFK-----------------------------------LFDEMRHREVACNVVTYNT 320
           + E +K                                   LF+ M       ++ TY T
Sbjct: 412 IQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTT 471

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI   C++ +++E+++L D+     + P   TY  +I G+C  G++  A R+F ++  NG
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
                +TY  LI    K    + A  L   M ++ + P EVT   L   + R    EKA 
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRR---EKAV 588

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
              S++ +       +T  VL+  L   G++++AS       +  L  + + Y   I
Sbjct: 589 VAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFI 645



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 165/348 (47%), Gaps = 6/348 (1%)

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           +T R+    L  +  SS  P   +  Y  +I  + K     +A     +M++ G+ P +N
Sbjct: 305 WTERAFRLFLKLIKSSSYKPNVHT--YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 362

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T+ +L+    K  SF+  +   ++ R +  + ++Y++  LI G C+ G + +A++VL   
Sbjct: 363 TYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMA 422

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G   + V YT +I   CK G I  A  LF ++ E G     HTYT LI    +    
Sbjct: 423 NNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQM 482

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++  + ++K     + P+  TY  +I  YC  GK +   ++F+ M       + +TY  L
Sbjct: 483 EESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGAL 542

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLCKE R++EA  L + M    + P  +T   L   +C   +   A  + ++L    +
Sbjct: 543 ISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRK 602

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           + +V   NVL+R  S  G+ + AS  +++  +  +    + YT  I+S
Sbjct: 603 NHTV---NVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINS 647



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 37/249 (14%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           +++  F +AG   +A  +  +++S+G    V T N ++RA    G+   A  +   M  R
Sbjct: 119 RMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTR 178

Query: 415 -GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P   ++  LI    R   ME+   + ++MQ  GF  D  T  V++   C KG  ++
Sbjct: 179 GGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRD 238

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS--- 530
            S+LF  M E    PN V Y   I G CK     +A  +L EM  KGL PN+ +++S   
Sbjct: 239 VSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLIN 298

Query: 531 ---------------------------------TIGVLCQDGKWPEAEVLLNQMLKLGLK 557
                                             IG  C++GK   AE+LL +M++ GL 
Sbjct: 299 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 358

Query: 558 PSVSLYNIL 566
           P+ + Y  L
Sbjct: 359 PNTNTYTTL 367


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 229/435 (52%), Gaps = 6/435 (1%)

Query: 132 MLDS----GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCC 186
           MLDS    G+ P   T+N+L+  + K+ +  +   +  +     +E D +++  LI G C
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYC 332

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G L  A ++L      GF P+   Y SLI+G C+N +I+RA  LF      GL  T  
Sbjct: 333 KMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y +LI GL + GL     +   +M  NG S  ++TYN +I+  C  G VS+   L ++ 
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +    +V T+NTLI G CK+++++   ++L++M   G++P+VITYN +++G   A + 
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKN 512

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           +     F  +   G  P+ +TYN+L  +  KAG    A DLV E+  +GITP  V++  +
Sbjct: 513 EDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATI 572

Query: 427 IDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           I  F  + D++ A++++  M ++   S    TY ++I+    K ++    KLF  M    
Sbjct: 573 ISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGG 632

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P+   Y +MI G+C  GN+    + L EM EKG +P++ ++   I  LC   +  EA 
Sbjct: 633 CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAV 692

Query: 546 VLLNQMLKLGLKPSV 560
            +++ M+  G+ P V
Sbjct: 693 DIIHFMVHNGIVPEV 707



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 261/572 (45%), Gaps = 36/572 (6%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS-- 81
           PLKA  +FN   R+ G +H+     +  + ++ K+  H +  A   +L      I +S  
Sbjct: 20  PLKALEMFNKVKREDGFKHS----LLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLL 75

Query: 82  ---------SFTPRSLLCHLTQLFPS----SSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
                    S+  +  +     +F      +  P   S  Y +I++  ++S    QA   
Sbjct: 76  EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLS--YNAIMNILVESGYFKQAHKV 133

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-------KVELDVYSFGIL 181
           F +M + G+ P   TF       I+  SF +     S  R          +L+  ++  +
Sbjct: 134 FLRMKNVGIVPDVYTF------TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTV 187

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G  E     +A+E+ N +  +G  P+V  +  L+   CK G+++ ++ L  K+ + G+
Sbjct: 188 VAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGM 247

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
            +   T+ + I GL + G+        + +   G++P + TYN LI   C    V E  K
Sbjct: 248 CSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEK 307

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
              ++ +  +  +  TYNTLI G CK   +Q AE++L      G  P+  TY  LI+G C
Sbjct: 308 YLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLC 367

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              E D+A  LFN     G  P+V+ YN+LI+   + G    A  ++ EM E G +    
Sbjct: 368 QNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIW 427

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY ++I+   +   +  A  + +     G+ PDV+T+  LI G C +  M+   ++ N M
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKM 487

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
           W   + P+ + YN ++ G  K   +   +     M EKG VPN  +Y+     LC+ GK 
Sbjct: 488 WSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKV 547

Query: 542 PEAEVLLNQMLKLGLKP-SVSLYNILYRAKNN 572
            EA  L++++L  G+ P +VS   I+    NN
Sbjct: 548 NEALDLVDEILNKGITPDTVSFATIISGFANN 579



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 189/445 (42%), Gaps = 57/445 (12%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAA-AQTLILKIISGRITSSSFTPR 86
           A S+ +   R+GL  TP  ++     L+  +  +S+   A+  + K+++G +    FT  
Sbjct: 270 AMSMLDSVIREGL--TPDVVT--YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 87  SLL---CHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           +L+   C +  L  +            V     Y S+I+   ++   D+AL  F+  L  
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDLN 192
           G++P    +N L+  + +     +        SEN C    D++++ ++I G C+ G ++
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS--DIWTYNLVINGLCKMGCVS 443

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  ++N     G+ P+V  + +LIDG CK   +E    +  K+   G+     TY  ++
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K    +D  E +E M   G  P+  TYN L    C  GKV+E   L DE+ ++ + 
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 313 CNVV------------------------------------TYNTLICGLCKEMRVQEAER 336
            + V                                    TYN +I    +++ +   E+
Sbjct: 564 PDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEK 623

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L  +M   G +P+  TY  +IDGFC  G TD  ++   ++   G  PS+ T+  +I    
Sbjct: 624 LFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLC 683

Query: 397 KAGNSKMASDLVREMEERGITPSEV 421
                  A D++  M   GI P  V
Sbjct: 684 VQHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 222/422 (52%), Gaps = 1/422 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  S +   +F S  
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D+ ++  L++G    G L +   +L+ +   G  P+  ++  LI    K   ++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++F K+ + GL     TY  +I  L K+G   D   ++E+M   G++P++  Y  LI
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +N++I   CKE RV E+E+L D M   G+ 
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITY+ LIDG+C AG+ D+A +L + + S G  P  VTYN LI  + +      A  L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM   G++P+ +TY I++     +     A E+Y  + KSG   ++ TY +++HGLC 
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                EA ++F ++  T L+     +N+MI    K G +  A  L   ++  GLVP++ +
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 688

Query: 528 YS 529
           YS
Sbjct: 689 YS 690



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 228/459 (49%), Gaps = 8/459 (1%)

Query: 122 SDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           S +AL   H M D    G  P   ++ +++    K    DK +  + E  +R ++  DV 
Sbjct: 174 SQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-RISPDVV 232

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I   C+   ++KA EVL  + + G  PN + Y S++ G C +   + A    +K+
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY  L+  L KNG   +  + ++ M   G+ P + TY  L+  Y  +G +
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L D M    +  +   +N LIC   K+ +V EA  +  +M+  G++PNV+TY  +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I   C +G  D A   F Q+   G +P+++ Y  LI +         A +L+ EM +RGI
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + + +  +I S  +   + ++ +++ LM + G  P+V TY  LI G C+ G M EA+K
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L +SM+   ++P+ V YN +I GYC+      AL L  EM   G+ PNI +Y+  +  L 
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNNI 573
              +   A+ L   + K G +  +S YNI+     KNN+
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 203/399 (50%), Gaps = 4/399 (1%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++GILI  CC AG L+  F  L  + + GF    + +T L+ G C +     A
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ EL  +    + T+L+ GL      ++  E    M  +   G +P + +Y  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG   + +  + EM  R ++ +VVTY+++I  LCK   + +A  +L  M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN +TYN ++ G+C + +  +A     +++S+G  P VVTYN L+    K G S  A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M +RG+ P   TY  L+  +     + +   +  LM ++G  PD + + +LI   
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             +  + EA  +F+ M +  L PN V Y  +I   CK G+   A+    +M ++GL PNI
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             Y+S I  LC   KW +AE L+ +ML  G+  +   +N
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 231/502 (46%), Gaps = 38/502 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I+   K   SD+A   +H+MLD  + P   T++S++  + K  + DK   +  +  
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  +  ++  ++ G C +    +A   L ++   G  P+VV Y SL+D  CKNG   
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY  L+ G    G   +     + M  NG+ P  + +N LI
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  + KV E   +F +MR   +  NVVTY  +I  LCK   V +A    +QM   G++
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 348 PNVITYNKLIDGFCDAGETDKA-----------------------------------FRL 372
           PN+I Y  LI   C   + DKA                                    +L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ +   G  P+V+TY+ LI  +  AG    A+ L+  M   G+ P  VTY  LI+ + R
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              M+ A  ++  M  SG SP++ TY +++ GL        A +L+  + ++  +     
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN+++ G CK   +  ALR+   +    L     +++  IG L + G+  EA+ L   + 
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 678

Query: 553 KLGLKPSVSLYNILYRAKNNIE 574
             GL P V  Y+++  A+N IE
Sbjct: 679 ANGLVPDVRTYSLM--AENLIE 698



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 216/475 (45%), Gaps = 38/475 (8%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y S++D   K+  S +A   F  M   G+ P 
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVT--YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  +  D + F ILI    +   +++A  V +
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PNVV Y ++I   CK+G ++ A + F ++ + GL      YT LI  L    
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E   +M   G+  +   +N +IH +C EG+V E  KLFD M    V  NV+TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ P+ +TYN LI+G+C     D A  LF ++ S+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+++TYN++++       +  A +L   + + G      TY I++    +++  ++A
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 440 FEMY-----------------------------------SLMQKSGFSPDVYTYGVLIHG 464
             M+                                   + +  +G  PDV TY ++   
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           L  +G ++E   LF SM E     N  + N ++    + G+  RA   L  ++EK
Sbjct: 696 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 166/358 (46%), Gaps = 9/358 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++I    KS   D A+ YF QM+D G+ P    + SL+  +   C FDK W     L 
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL---CIFDK-WDKAEELI 464

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  + L+   F  +I   C+ G + ++ ++ + +  +G  PNV+ Y++LIDG C  
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A  L   +  +G+     TY  LI G  +     D    +++M  +GVSP++ TY
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++    +  + +   +L+  +        + TYN ++ GLCK     EA R+   + +
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             +     T+N +I      G  D+A  LF  L +NG  P V TY+++     + G  + 
Sbjct: 645 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 704

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             DL   MEE G T +      ++   ++  D+ +A    S++ +  FS +  T  +L
Sbjct: 705 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 10/279 (3%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---ISPNVITYNKLID 358
           +F+E+  R    ++   N  +  + +        R  ++M  AG   ++P V TY  LI 
Sbjct: 37  VFEELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYGILIG 95

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV-REMEERGIT 417
             C AG  D  F     +   G     +T+  L++       +  A D+V R M E    
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLM---QKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           P   + TIL+      +  ++A E+  +M   +  G +PDV +Y  +I+G   +G+  +A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
              ++ M + ++ P+ V Y+ +I   CK     +A+ +L  M + G++PN  +Y+S +  
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL--YRAKN 571
            C   +  EA   L +M   G++P V  YN L  Y  KN
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 273/548 (49%), Gaps = 25/548 (4%)

Query: 28  AFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           A   F W+    G +HT +S+  ++ +L+S   +H    A  L+L +IS       +   
Sbjct: 80  ALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHK---AMDLLLHLISYNSGEEGWHNI 136

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESI----IDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
            L  H T          TK R+ E++    ++ ++K  ++  AL    +M    + P   
Sbjct: 137 FLKIHETH---------TKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIG 187

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
             NSLL  +++S   +  W F  E + + + L+     + I G C  G+++  +++L ++
Sbjct: 188 VCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEM 247

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           + +G  P+VV YT +ID  CK   ++ A  +  K+ ++G+     + + ++ G  K G  
Sbjct: 248 KYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKS 307

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++  +  E   L   SP+++ +N  I + C +G + +  K+F +M    +  +  +Y T+
Sbjct: 308 EEAMDVLEVFNL---SPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTM 364

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           + G CK   +  A + L +M   GI P+V TY  LID  C  G  + A  LF ++ + G 
Sbjct: 365 MAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGL 424

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P VV+YN L+  + K G+ + A +L+  M   G++P  VTY ILI   ++   + +A +
Sbjct: 425 VPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKD 484

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   + + GFSPDV T+  +I G   KGN +EA  LF  M E  LEP+ V  + ++ GYC
Sbjct: 485 ILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYC 544

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +      A  L  +M + GL  ++  Y+S I   C  G   +A  L++ M++ G+ P+  
Sbjct: 545 RTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPN-- 602

Query: 562 LYNILYRA 569
             NI + A
Sbjct: 603 --NITHHA 608


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 226/431 (52%), Gaps = 1/431 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILI 182
           +AL  F +M+  G +P   T+ +L+  + K  +      L  S  +   E +V ++  +I
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTII 221

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
               +   +N+A  + +++   G SPNV  Y S+I G CK  + +    L  ++ +  ++
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                +T L+  L K G+     +  + M   GV P + TY  L+  +C   ++ E  K+
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKV 341

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FD M  +  A NV++Y+TLI G CK  R+ +A  L ++M    + PN++TYN LI G C 
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A  LF+++ ++GQ P +VTY +L+    K  +   A  +++ +E   + P   +
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y I+ID   R  ++E A +++S +   G  PDV+TY ++I+GLC++G + EA+KLF  M 
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                P+D  YN++  G+ +   +  A++LL EM  +G   + ++ +  + +L  DG   
Sbjct: 522 TDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQ 581

Query: 543 EAEVLLNQMLK 553
             + +L++ ++
Sbjct: 582 SVKQILHEFVQ 592



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 202/401 (50%), Gaps = 2/401 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI+G C  G + +A  + +++   GF PN V Y +LI G CK G+   A  L 
Sbjct: 143 DTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLL 202

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + +        TY  +I  LFK+    +    + +M   G+SP++ TYN +IH  C  
Sbjct: 203 RSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKF 262

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +      L +EM   ++  NVV + TL+  LCKE  V  A  ++D M   G+ P+V+TY
Sbjct: 263 SEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+DG C   E D+A ++F+ +   G +P+V++Y+ LI  + K      A  L  EM +
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           R + P+ VTY  LI        +  A  ++  M  SG  PD+ TY +L+  LC   ++ +
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQ 442

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +  ++  + L P+   YN++I G C+ G    A  L   ++ KGL P++ +Y+  I 
Sbjct: 443 AMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
            LC  G   EA  L  +M   G  P    YN++ R   +NN
Sbjct: 503 GLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNN 543


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 234/469 (49%), Gaps = 9/469 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKSCSFDK 159
           N V   R +  +  A+ K+ L D+A+  FH+M+D     RS  +FNS+L  +I    + +
Sbjct: 107 NRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHR 166

Query: 160 GWLFF-----SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           G  F+     S     +  +  SF ++IK  C+   +++A EV   + E    P+   Y 
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +L+DG CK   I+ A +L  ++   G   +   Y VLI GL K G      +  + M L 
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+  TYN LIH  C +GK+ +   L + M   +   N VTY TLI GL K+ R  +A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            RLL  M+  G   N   Y+ LI G    G+ ++A  L+ ++   G  P++V Y+VL+  
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             + G    A +++  M   G  P+  TY+ L+  F ++   E+A +++  M K+G S +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
            + Y VLI GLC  G +KEA  +++ M    ++P+ V Y+ +I G C  G+   AL+L  
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526

Query: 515 EM---NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           EM    E    P++ +Y+  +  LC       A  LLN ML  G  P V
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 43/408 (10%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--- 168
           +I A  K R  D+A+  F  M +    P   T+ +L+  + K    D+  L   E +   
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C     +Y+  +LI G C+ GDL +  ++++ +   G  PN V Y +LI G C  G +++
Sbjct: 253 CSPSPVIYN--VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310

Query: 229 AKMLFRKI------------GEL--GLVA---------------------TQHTYTVLIC 253
           A  L  ++            G L  GLV                       QH Y+VLI 
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GLFK G  ++    + KM   G  P++  Y+ L+   C EGK +E  ++ + M       
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N  TY++L+ G  K    +EA ++  +M   G S N   Y+ LIDG C  G   +A  ++
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM---EERGITPSEVTYTILIDSF 430
           +++ + G  P  V Y+ +I+     G+   A  L  EM   EE    P  VTY IL+D  
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
               D+ +A ++ + M   G  PDV T    ++ L  K N  +  + F
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 190/426 (44%), Gaps = 22/426 (5%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
           LLL +M S   + +  +   +I G       T  + L     L     N VT + L   +
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSENRCKV 171
               LK +L D+A+    +M+ S   P   T+ +L+  ++K   + D   L  S      
Sbjct: 303 C---LKGKL-DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            L+ + + +LI G  + G   +A  +  ++ E G  PN+V+Y+ L+DG C+ G    AK 
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +  ++   G +   +TY+ L+ G FK GL ++  + +++M   G S + + Y+ LI   C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM---KMAGISP 348
             G+V E   ++ +M    +  + V Y+++I GLC    +  A +L  +M   +     P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TYN L+DG C   +  +A  L N +   G  P V+T N  +   S+  NS    D  
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS---CDKG 595

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R   E            L+   ++   +  A  +  +M     +P   T+ +++  +C  
Sbjct: 596 RSFLEE-----------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKP 644

Query: 469 GNMKEA 474
             +  A
Sbjct: 645 KKINAA 650


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 231/497 (46%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI+DA  K+R  D+A F   QM+D GV P   T+N+++     S  + +    F +  
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMT 329

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D  +F   +   C+ G    A E+   +   G  P++V Y+ L+ G    G   
Sbjct: 330 SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFA 389

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               LF  + + G+V+  H   +LI    K G+  +    + +MQ  GV P++ TY+ LI
Sbjct: 390 DMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLI 449

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG----------------------- 324
             +C  G++++  + F +M    +  N   Y++LI G                       
Sbjct: 450 SAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH 509

Query: 325 -------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                        LC E RV +A+ + + +   G  P ++T+N LIDG+C  G+ +KAF 
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + + + S G  P VVT N L+  + K+G       L REM  + + P+ VTY I++D  +
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R+     A +M+  M  SG + D+ TY +L+ GLC      EA  LF+ +     + +  
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           + N MI    K      A  L   ++  GLVPN+++Y   I  L ++G   EA+ + + M
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749

Query: 552 LKLGLKPSVSLYNILYR 568
            K G  PS  L N + R
Sbjct: 750 EKSGCAPSSRLLNDIIR 766



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 258/554 (46%), Gaps = 71/554 (12%)

Query: 77  RITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL---------YESIIDAHLKSRLSDQALF 127
           R +SSS TP S L    QL P  S+  T   L           +I      +  +D A  
Sbjct: 8   RFSSSSTTPMSRL----QLLPRRSSATTSPPLRCWDPQVAFVAAIARVRAGTFCTDDAHH 63

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIK-----SCSFDKGWLFFSENR-CKVE-------LD 174
            F ++L  G    + + N  L  + +     SCS     +    NR C+ E       L 
Sbjct: 64  LFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLT 123

Query: 175 VYSFGILIKGCCEA--GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC--KNGDIERAK 230
           V ++GIL+  CC A   DL  AF  + +L   G     +  T+ +   C  K  D E   
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAF--VARLLRAGLKTGTIQATTFLKCLCHAKRTD-EAVD 180

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIH 288
           +L  ++ EL  V    +Y  +I  L  +   ++  +  ++M   G   SP + ++N +IH
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +  +G+VS+   LF+EM  + V  +V TYN+++  LCK   + +AE +L QM   G+ P
Sbjct: 241 GFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP 300

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +TYN +I G+  +G   ++ ++F ++ S G  P  VT++  + +  K G SK A ++ 
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360

Query: 409 REMEERGITPSEVTYT-----------------------------------ILIDSFVRS 433
           + M  +G  P  V+Y+                                   ILI +  + 
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             M++A  +++ MQ  G  P+V TY  LI   C  G + +A + F+ M    +EPN  VY
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           + +I G+C  G+  +A   + EM  KGL  PNI  +SS I  LC +G+  +A+ + N ++
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI 540

Query: 553 KLGLKPSVSLYNIL 566
            +G +P++  +N L
Sbjct: 541 HIGDRPTIVTFNSL 554



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 225/500 (45%), Gaps = 39/500 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVR--PRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y ++I +      S +AL    +M   G R  P   +FN+++    K     K    F+E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K V  DV ++  ++   C+A  ++KA  VL Q+ + G  P+ V Y ++I G   +G 
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + +  +FRK+   GL+    T++  +  L K+G  KD  E ++ M   G  P + +Y+ 
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H Y  EG+ ++   LF  M  + +  N    N LI    K   + EA  +  +M+  G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PNV+TY+ LI  FC  G    A   F+Q+ S G  P+   Y+ LI  F   G+   A 
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK 497

Query: 406 DLVREMEERGI------------------------------------TPSEVTYTILIDS 429
           + + EM  +G+                                     P+ VT+  LID 
Sbjct: 498 EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDG 557

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           +     MEKAF +   M   G  PDV T   L+ G C  G + +   LF  M   K++P 
Sbjct: 558 YCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN+++ G  + G +  A ++  EM + G   +I +Y   +  LC++    EA  L +
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 677

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           ++  +  K  +++ N +  A
Sbjct: 678 KLGAMDCKFDITILNTMINA 697



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 191/418 (45%), Gaps = 37/418 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           FH M D G+    +  N L+    K    D+  L F+E + + V  +V ++  LI   C 
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L  A E  +Q+  +G  PN  +Y SLI G C +GD+ +AK                 
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK----------------- 497

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
                             EF  +M   G+  P++  ++ +IH  C EG+V +   +F+ +
Sbjct: 498 ------------------EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            H      +VT+N+LI G C   ++++A  +LD M   GI P+V+T N L+ G+C +G+ 
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D    LF ++      P+ VTYN+++    +AG +  A  +  EM + G      TY IL
Sbjct: 600 DDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 659

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +    R+D  ++A  ++  +       D+     +I+ L      +EA+ LF ++  + L
Sbjct: 660 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGL 719

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            PN   Y +MI    KEG+   A  +   M + G  P+    +  I +L Q G   +A
Sbjct: 720 VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 4/406 (0%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNP--VTKSRLYESIIDAHLKSRLSDQALFYFH 130
           I+S  I    +        +  LF S ++   V+       +I AH K  + D+A+  F 
Sbjct: 372 IVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFT 431

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
           +M   GVRP   T+++L+    +          FS+     +E +   +  LI G C  G
Sbjct: 432 EMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491

Query: 190 DLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           DL KA E ++++   G   PN+V ++S+I   C  G +  A+ +F  +  +G   T  T+
Sbjct: 492 DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF 551

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G    G  +  F   + M   G+ P + T N L+  YC  GK+ +G  LF EM H
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           ++V    VTYN ++ GL +  R   A+++  +M  +G + ++ TY  L+ G C    TD+
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 671

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF++L +      +   N +I A  K    + A+DL   +   G+ P+  TY ++I 
Sbjct: 672 AITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIR 731

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           + ++   +E+A  M+S M+KSG +P       +I  L  KG++ +A
Sbjct: 732 NLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 170/378 (44%), Gaps = 4/378 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I A  +  RL+D A+  F QM+  G+ P +  ++SL+          K   F SE 
Sbjct: 445 YSTLISAFCRMGRLAD-AMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             K     ++  F  +I   C  G +  A +V N +  +G  P +V + SLIDG C  G 
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E+A  +   +  +G+     T   L+ G  K+G   DG   + +M    V P+  TYN 
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++      G+ S   K+F EM     A ++ TY  L+ GLC+     EA  L  ++    
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              ++   N +I+        ++A  LF  + ++G  P+V TY V+IR   K G+ + A 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   ME+ G  PS      +I   ++  D+ KA    S +  +  S +  T  +L+   
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLF 803

Query: 466 CMKGNMKEASKLFNSMWE 483
             KG  +E  K   + ++
Sbjct: 804 SSKGKHREQIKFLPAKYQ 821


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 206/399 (51%), Gaps = 1/399 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV  F +LI GC + GD+ KA+E+  +++ MG  PNV I  SL++G  +   +E A  LF
Sbjct: 359 DVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLF 418

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +  E G+     TY +L+  L + G   +    +EKM   G++PSL +YN LI  +C +
Sbjct: 419 DEAVEHGITNVV-TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKK 477

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + + + +   +  R +  N VTY  LI G  K+   + A  + +QM  A I+P   T+
Sbjct: 478 GCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTF 537

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N +I+G    G   +     N     G   + +TYN +I  F K G    A    REM E
Sbjct: 538 NTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE 597

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            GI+P  +TYT LID   +S+ +  A EM+S M+  G   DV  Y  LI G C   +M+ 
Sbjct: 598 SGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMES 657

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           ASK F  + +  L PN VVYN MI G+    N   AL L  EM +  +  ++  Y+S IG
Sbjct: 658 ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIG 717

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            L ++GK   A  L ++ML   + P + +Y +L    +N
Sbjct: 718 GLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSN 756



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 226/448 (50%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           ++A   + +M   G++P     NSLL    +    +  +  F E       +V ++ IL+
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILL 436

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           K   E G +N+A  +  ++   G +P++V Y +LI G CK G +++A  + + I E GL 
Sbjct: 437 KWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLK 496

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TYT+LI G FK G  +  F  +E+M    ++P+ +T+N +I+     G+VSE    
Sbjct: 497 PNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDK 556

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +    +      +TYN++I G  KE  V  A     +M  +GISP+VITY  LIDG C 
Sbjct: 557 LNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCK 616

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           + +   A  + + +K  G    VV Y+ LI  F K  + + AS    E+ + G+TP+ V 
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVV 676

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  +I  F+  ++ME A  ++  M K+    D+  Y  +I GL  +G +  A  L++ M 
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              + P+ V+Y ++I G    G    A ++L EM+   + P++  Y+  I    ++G   
Sbjct: 737 SKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQ 796

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           EA  L ++ML  GL P  + Y+IL   K
Sbjct: 797 EAFRLHDEMLDKGLVPDDTTYDILVNGK 824



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 205/476 (43%), Gaps = 50/476 (10%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL +FHQ+       ++  F SLLI ++ S S     L F  N        Y FG     
Sbjct: 77  ALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNN-------YVFG----- 124

Query: 185 CCEAGDLNKAFE--VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
             +A    K F   +L      GF  +  ++  L+    +   I  A   FR + E  LV
Sbjct: 125 --DATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLV 182

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                   L+  + +  +  D  + Y++M   G+    YT + ++     EGK  E  K 
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKF 242

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F E + R +  +   Y+ L+  +C+ + +  A  LL +M+  G  P+  TY  +I     
Sbjct: 243 FKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVK 302

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G   +A RL +++ S G   +V+    L++ +   G+  +A  L  E+ E G+ P  V 
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI 362

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY-------------------------- 456
           +++LI+   +  DMEKA+E+Y+ M+  G  P+V+                          
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422

Query: 457 --------TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
                   TY +L+  L   G + EA  L+  M    + P+ V YN +I G+CK+G   +
Sbjct: 423 EHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDK 482

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           A  +L  + E+GL PN  +Y+  I    + G    A V+  QM+   + P+   +N
Sbjct: 483 AYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFN 538



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 34/299 (11%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V+ S  Y SIID   K    D AL  + +M +SG+ P                       
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP----------------------- 602

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                      DV ++  LI G C++  +  A E+ + ++  G   +VV Y++LIDG CK
Sbjct: 603 -----------DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCK 651

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             D+E A   F ++ ++GL      Y  +I G       +     +++M  N V   L  
Sbjct: 652 MHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQV 711

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  +I     EGK+S    L+ EM  +++  ++V Y  LI GL    +++ A ++L +M 
Sbjct: 712 YTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMD 771

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              I+P+V+ YN LI G    G   +AFRL +++   G  P   TY++L+    K  ++
Sbjct: 772 GNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 52/122 (42%)

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           + GF  D   +  L+        + +A + F +M E  L P   + N ++    +     
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A +L  EM E+G+  +  +    +    ++GK+ E E    +    GL+   + Y+IL 
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262

Query: 568 RA 569
           +A
Sbjct: 263 QA 264


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 212/409 (51%), Gaps = 9/409 (2%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFY--FHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           +SN VT S L          S+L   +L +  F  +L  G  P + T  +L+  +     
Sbjct: 101 ASNLVTLSILINCF------SQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 157 FDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
             K   F  +      +L+  S+  LI G C+ G    A E+L +++      +VV+Y +
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           +IDG CK+  +  A   + ++    +  T  TY  LICGL   G  KD      KM L  
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           ++P++YT++ L+  +C EGKV E   +F  M  ++V  N+VTYN+L+ G C    V +AE
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            + + M   G++P+V +Y+ +I GFC     D+A +LF ++      P VVTYN LI   
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K+G    A  L+ EM +RG  P+ +TY  L+D+  ++  ++KA E+ + ++     P V
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            TY +LI+GLC  G +K+A K+F  +       +   YN MI G+CK+G
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 199/396 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++ +  ILI    + G  + +F V + + + G+ P+ +  T+LI G C  GDI +A    
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFH 162

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+  LG    Q +Y  LI GL K G  K   E   ++    V   +  YN +I   C +
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V++ F  + EM  + +   VVTYNTLICGLC   ++++A  LL +M +  I+P V T+
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + L+D FC  G+  +A  +F  +      P++VTYN L+  +        A  +   M +
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P   +Y+I+I  F +   +++A +++  M      PDV TY  LI GLC  G +  
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISY 402

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KL   M +    PN + YN ++   CK  +  +A+ LL ++ +  + P++ +Y+  I 
Sbjct: 403 ALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILIN 462

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC+ G+  +A+ +   +L  G    V  YN + + 
Sbjct: 463 GLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKG 498



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 189/368 (51%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +   LIKG C  GD++KA    +++  +GF  N V Y +LI+G CK G  + A  
Sbjct: 136 EPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALE 195

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           + R+I    +      Y  +I G+ K+ L  D F+FY +M    + P++ TYN LI   C
Sbjct: 196 MLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLC 255

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G++ +   L  +M    +   V T++ L+   CKE +V+EA+ +   M    + PN++
Sbjct: 256 IMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIV 315

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L++G+C   E +KA  +FN +   G +P V +Y+++I  F K      A  L  EM
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             + I P  VTY  LID   +S  +  A ++   M   G  P++ TY  L+  LC   ++
Sbjct: 376 HCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHV 435

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A +L   + +  ++P+   YN++I G CK G    A ++  ++   G   ++ +Y++ 
Sbjct: 436 DKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTM 495

Query: 532 IGVLCQDG 539
           I   C+ G
Sbjct: 496 IKGFCKKG 503



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 35/401 (8%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           L +   +P+++ +  ++    K         L R++   G+ +   T ++LI    + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
               F  +  +   G  P   T   LI   C +G + +     D++       N V+Y T
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 321 LICGLCKEMRVQEAERLL-----------------------------------DQMKMAG 345
           LI GLCK  + + A  +L                                    +M    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I P V+TYN LI G C  G+   A  L +++     +P+V T+++L+ AF K G  K A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++   M ++ + P+ VTY  L++ +   +++ KA  +++ M + G +PDV++Y ++I G 
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    + EA KLF  M   ++ P+ V YN +I G CK G    AL+L+GEM+++G  PNI
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+S +  LC++    +A  LL ++    ++PSV  YNIL
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNIL 460



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 1/193 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+++ +      ++A   F+ M   GV P  ++++ ++    K    D+    F E  
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           CK +  DV ++  LI G C++G ++ A +++ ++ + G  PN++ Y SL+D  CKN  ++
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  K+ +  +  +  TY +LI GL K+G  KD  + +E + +NG +  +YTYN +I
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496

Query: 288 HEYCNEGKVSEGF 300
             +C +G V   F
Sbjct: 497 KGFCKKGFVIPQF 509


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 205/398 (51%), Gaps = 3/398 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            LD   +  LI G C+A     A E+L+ +   G+  +VV YT+LIDG CK+GD++ A+ 
Sbjct: 7   RLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQA 66

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L +K+ + G      TYT LI GL K     D  +  ++M  +G  P L TYN LIH  C
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 292 NEGKVSE-GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              ++ + G  L + M       +VVTYNT I GLCK  ++ +   +L++M   GISP+V
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +T+  +I G C A   D AF++F  +   G  P  +TY++++   S+A       +++  
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEH 246

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G      TY  LI + +R+ D+E A   Y    ++G   +VYT+   I  LC  G 
Sbjct: 247 MVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGK 306

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYS 529
              A  +   M E+   PN + YN +I G CK GN   A +L  +M + G   P++  ++
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGL-KPSVSLYNIL 566
           + I   C+ G+  +A+ LL +M    +  P V  YN +
Sbjct: 367 TLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTM 404



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 200/388 (51%), Gaps = 11/388 (2%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK----NGDIERAK 230
           V ++  LI G C++GDL+ A  +L ++ + G +PNVV YT+LIDG CK    +  I+  K
Sbjct: 45  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 104

Query: 231 MLFRKIGELGLVATQHTYTVLICGL-FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            + R   E  LV    TY  LI GL   N +   G    E M  +G  P + TYN  I  
Sbjct: 105 RMLRSGCEPDLV----TYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISG 160

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C  GK+ +G ++ +EM    ++ +VVT+ ++I GLCK  R+ +A ++   M   G  P+
Sbjct: 161 LCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPD 220

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +TY+ ++D    A   D    +   +  +G      TY  LI A  +AG+ + AS    
Sbjct: 221 SLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYE 280

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +  E G      T+   I +  RS     A  +   M +SG  P++ +Y  +I GLC  G
Sbjct: 281 QAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 340

Query: 470 NMKEASKLFNSMWETK-LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIAS 527
           N+ +A KL   M ++   +P+ + +N +I G+CK G   +A +LL EM  K + VP++ +
Sbjct: 341 NVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVT 400

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           Y++ I    + G   +A++LL +M  +G
Sbjct: 401 YNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 174/363 (47%), Gaps = 2/363 (0%)

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           F  +  IY +LI G CK      A  L   +   G  A+  TYT LI GL K+G      
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              +KM   G +P++ TY  LI   C   +  +  +    M       ++VTYN+LI GL
Sbjct: 66  ALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGL 125

Query: 326 CKEMRVQEAERLLDQMKM-AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           C   R+ +A  +L ++ + +G  P+V+TYN  I G C AG+ DK   +  ++   G SP 
Sbjct: 126 CMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVT+  +I    KA     A  + + M ERG  P  +TY+I++D+  R++ ++   E+  
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M KSG      TY  LIH L   G+++ AS  +    E         +N  I   C+ G
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLY 563
               A  +L  M E G +PN+ SY+  I  LC+ G   +A  L  +ML  G  KP V  +
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365

Query: 564 NIL 566
           N L
Sbjct: 366 NTL 368



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 186/401 (46%), Gaps = 8/401 (1%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LL  M+++ + A+      +I G   S        L         + N VT    Y ++I
Sbjct: 32  LLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVT----YTALI 87

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
           D   K+R    A+    +ML SG  P   T+NSL+  +  +   D   L   E   +   
Sbjct: 88  DGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGR 147

Query: 174 --DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             DV ++   I G C+AG L+K  E+L +++  G SP+VV + S+I G CK   I+ A  
Sbjct: 148 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQ 207

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F+ + E G V    TY++++  L +        E  E M  +G      TY  LIH   
Sbjct: 208 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G +      +++         V T+N  I  LC+  +   A+ +L  M  +G  PN++
Sbjct: 268 RAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 327

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +YN +IDG C +G  D A++L  ++  +G   P V+ +N LI  F KAG    A  L++E
Sbjct: 328 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKE 387

Query: 411 MEERGI-TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           M+ + I  P  VTY  +ID   +   +++A  +   MQ  G
Sbjct: 388 MKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R    +   YNTLI GLCK  + + A  LL  M   G   +V+TY  LIDG C +G+
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A  L  ++   G +P+VVTY  LI    KA     A   V+ M   G  P  VTY  
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 426 LIDSFVRSDDMEKA-FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           LI     ++ M+ A   +  LM +SG  PDV TY   I GLC  G + +  ++   M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+ V +  +I G CK      A ++   M E+G VP+  +YS  +  L +  +    
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 545 EVLLNQMLKLG 555
           E +L  M+K G
Sbjct: 241 EEVLEHMVKSG 251



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%)

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M    F  D   Y  LI GLC     + A +L + M     + + V Y  +I G CK G+
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A  LL +M + G  PN+ +Y++ I  LC+  +  +A   + +ML+ G +P +  YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 566 L 566
           L
Sbjct: 121 L 121


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 235/515 (45%), Gaps = 76/515 (14%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGIL 181
           A+  F+ +   G  P   T N LL  ++K+  F+K    F   SE  C    DV+SF  +
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP---DVFSFTNV 249

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+ G +  A E+  ++E++G SPNVV Y  +I+G C+NG ++ A  L  K+   G+
Sbjct: 250 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 309

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY  LI GL K           ++M  +G +P++  +N LI  YC  G +    K
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 369

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-------------- 347
           + D M  + +    VT  +L+ G CK  +++ AE  L+++  +G+S              
Sbjct: 370 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 429

Query: 348 ---------------------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
                                P+ +    L+ G C  G+  +A  L+ +L   G   S V
Sbjct: 430 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 489

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T N LI     AG    AS +V+EM ERG+    +TY  LI  F     +E  F +   M
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASK------------------------------ 476
            K G  PD+YTY  L+ GLC  G + +A K                              
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 477 -----LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
                LFN +   K+E N +VYN++I  +C+ GN   AL+LL  M  KG++PN A+YSS 
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  +C  G   +A+ L+++M K G  P+V  Y  L
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 704



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 231/489 (47%), Gaps = 19/489 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++  S  NP     ++ ++ID + K    + AL     M+   + P S T  SL+   
Sbjct: 336 LDEMIGSGFNP--NVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGF 393

Query: 152 IKSCSFDKGWLFFSENRCKVELDVYSFGI---------LIKGCCEAGDLNKAFEVLNQLE 202
            KS   +      +EN  +   ++ S G+         ++   C+    + AF     + 
Sbjct: 394 CKSDQIEH-----AENALE---EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 445

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
              F P+ ++ T L+ G CK+G    A  L+ ++ E G  A++ T   LI GL   G   
Sbjct: 446 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 505

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +     ++M   G+     TYN LI  +CNEGKV   F+L +EM  R +  ++ TYN L+
Sbjct: 506 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 565

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLC   ++ +A +L D+ K +G+  N+ TY  +++G+C A   +    LFN+L S    
Sbjct: 566 RGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKME 625

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
            + + YN++I+A  + GN   A  L+  M+ +GI P+  TY+ LI        +E A  +
Sbjct: 626 LNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHL 685

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M+K GF P+V  Y  LI G C  G M  A   +  M    + PN   Y +MI GYCK
Sbjct: 686 IDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCK 745

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            GN  +A  LL +M E G+VP++ +Y+      C+      A  + +QM   GL      
Sbjct: 746 LGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEIT 805

Query: 563 YNILYRAKN 571
           Y  L    N
Sbjct: 806 YTTLVHGWN 814


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 165/541 (30%), Positives = 262/541 (48%), Gaps = 27/541 (4%)

Query: 13  TLNLISRMAKLPPL-KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
            L+L+ R +  PPL +  +L  W SR   +         L L         H+  ++ + 
Sbjct: 35  VLHLLLRTSPPPPLPRLVALARW-SRAHFRAPLPLRLHTLLLARLASGGGLHSLLRSELH 93

Query: 72  KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
            + +GR+ S    P S+L    +  P+SS P+    L  ++  A        Q L  +  
Sbjct: 94  ALAAGRLHS----PASIL----RALPASSRPLVADMLVLALARA-------SQPLAAYGA 138

Query: 132 MLDSGV-----RPRSNTFNSLLIFVIKSCSFD-KGWLFFSENRCKVELDVYSFGILIKGC 185
            L +G      RP + + N+LL  ++++   D     F +  R +V  D ++F I+I G 
Sbjct: 139 FLLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGL 198

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK---NGDIERAKMLFRKIGELGLV 242
           C+ G L KA +V   +   G  P+VV Y +LIDG  K    G +    ML +++ + G+ 
Sbjct: 199 CKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGIS 258

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               T+ VLI G  K        + +E+M+ +G+  ++ TY  L+   C EGKV +  KL
Sbjct: 259 PNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKL 318

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +EM    +A  + T N+++ G CK+  + EAE  +D M   G+ PNV+TYN LIDG+  
Sbjct: 319 VEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQR 377

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+  +A      +   G SP V TYN LI  F+ + + +  S L+ EM+E G+    VT
Sbjct: 378 LGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVT 437

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y +LI +     ++ KA ++   M + G  P   TY  +I+G C KG+ K A  +   M 
Sbjct: 438 YNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRME 497

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           + K   N V  N+ +  +CK G    A  +L EM EKGLVPN  +Y      + + G  P
Sbjct: 498 KCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVP 557

Query: 543 E 543
           +
Sbjct: 558 D 558



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 199/363 (54%), Gaps = 4/363 (1%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           SP+   +  +I G CK G + +A  + + +   GL+ +  TY  LI G +K G     + 
Sbjct: 185 SPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYH 244

Query: 267 ---FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                ++M   G+SP++ T+N LI+ YC E  ++   K+F+EMR   +  N+VTY +L+ 
Sbjct: 245 VDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVS 304

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLC+E +V+++ +L+++M+  G++  + T N +++GFC  G   +A    + +   G  P
Sbjct: 305 GLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKP 363

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTYN LI  + + G  K A+     M  +GI+P   TY  LI  F  S D      + 
Sbjct: 364 NVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLL 423

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M+++G   D+ TY VLI  LC KG +++A KL + M E  LEP    YN +I G+C++
Sbjct: 424 DEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEK 483

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G++  A  +   M +     N+ + +  +   C+ GK  EA V+LN+ML+ GL P+   Y
Sbjct: 484 GDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITY 543

Query: 564 NIL 566
            I+
Sbjct: 544 EII 546



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 4/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS ++ N L+       +V    + F     R V+ +  T+N +I GLCK  ++++A  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR---LFNQLKSNGQSPSVVTYNVLIRA 394
              M+  G+ P+V+TYN LIDG+   G   K +    L  ++   G SP+VVT+NVLI  
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K  N   A  +  EM + GI  + VTYT L+    R   +E + ++   M++ G +  
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-T 329

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + T   +++G C KG M EA    + M +  ++PN V YN +I GY + G    A    G
Sbjct: 330 LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKG 389

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M  KG+ P++ +Y+  I        W     LL++M + G+K  +  YN+L  A
Sbjct: 390 AMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGA 444


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 227/483 (46%), Gaps = 39/483 (8%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGI 180
           S Q L  F +M   GV P     N +L  +  +  +D     +S+  +  VE  ++++  
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234

Query: 181 LIKGCCEAGDLNKAFEVLNQLEE--MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           L+   C+AG +++A  +L  +E    G  PN V Y  +I+G  + G++E+A  L   I  
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMR 293

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           L   A+  TY  LI GL      +       +M+  G+ P++ TYN LI      G    
Sbjct: 294 LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
               FDEMR + +  +++TYN+LI G CK   +++A  L   +K AG+ P V+TYN LID
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 359 GFCDAGETDKAFRL-----------------------------------FNQLKSNGQSP 383
           G+C  G+ + A RL                                   F+++ S G  P
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
               YN  I A    G    A  L  EM  RGI+   VTY +LID   ++  ++ A+ ++
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G   D  TY  LIH  C +G + EA  +F+ M  + L P+ V Y + I  YC+ 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           GN Y A     +M E+G+ PN  +Y+  +  LC+ G+   A    ++ML+ GL P+   Y
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 564 NIL 566
            +L
Sbjct: 654 TLL 656



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 220/463 (47%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+  K+   DQA+     M    +G  P   T+N ++  + +    +K       
Sbjct: 232 YNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDI 291

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI G      + KA  +L ++E  G  P VV Y +LIDG  K G+ 
Sbjct: 292 MRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++ F ++   GL+    TY  LI G  K G  K     +  ++  G+ P++ TYN L
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G +    +L +EM   +   +V TY  L+ G C    +       D+M   G+
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G    AF+L  ++   G S   VTYNVLI    K G+ K A  
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+    VTYT LI +      + +A  ++  M  SG SP V TY + IH  C
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYC 591

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M E  +EPN+V YN+++   C+ G +  A +   EM E+GLVPN  
Sbjct: 592 RRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKY 651

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C++G W  A  L  +M + G+ P    +N L++ 
Sbjct: 652 TYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG 694



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 217/408 (53%), Gaps = 6/408 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I   L     ++A     +M + G+ P   T+N+L+  + K+ + +   + F E R
Sbjct: 303 YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L D+ ++  LI G C+AG+L +A  +   L+  G  P V+ Y  LIDG C+ GD+E
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLE 422

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICG--LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            A+ L  ++ E   +    TYT+L+ G  + +N        F+++M   G+ P  + YN 
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVR--IFFDEMLSKGLEPDCFAYNT 480

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            I      G ++  F+L +EM  R ++ + VTYN LI GLCK   +++A  L  +M   G
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDG 540

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +  + +TY  LI   C+ G   +A  +F+ + ++G SPSVVTY + I  + + GN  +A 
Sbjct: 541 LRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAY 600

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
              R+M E G+ P+EVTY +L+ +  R    E A++ +  M + G  P+ YTY +LI G 
Sbjct: 601 GWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGS 660

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           C +GN   A +L+  M +  + P+   +N +  G+  EG+ Y A++ L
Sbjct: 661 CKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYL 707



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 3/308 (0%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +++M  +GV+P +   NC++    +  +  +   ++ +M    V  ++ TYNTL+   CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 328 EMRVQEAERLLDQM--KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
             R+ +A  LL  M  + AG  PN +TYN +I+G    GE +KA +L + ++ + ++ S 
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA-SA 300

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TYN LI         + A  L+ EME  GI P+ VTY  LID   ++ + E A   +  
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M+  G  PD+ TY  LI+G C  GN+K+A  LF  +    L P  + YN++I GYC+ G+
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A RL  EM E+  +P++ +Y+  +   C         +  ++ML  GL+P    YN 
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 566 LYRAKNNI 573
              A+  I
Sbjct: 481 RISAELTI 488


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 190/353 (53%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+  +I G C+ G ++ A EV+N + E G  PN + YT L++G  K GD E A  +F ++
Sbjct: 468 SYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQM 527

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+V T +T+  +I GL K G   +  +           P+  TYNC+I  Y  EG +
Sbjct: 528 VAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAI 587

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                ++ EM   E++ NV+TY +LI G CK  ++  A ++ D MK  G+  ++  Y  L
Sbjct: 588 DSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATL 647

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC   + + A + F++L   G +P+ + YN++I A+    N + A +L +EM    I
Sbjct: 648 IAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKI 707

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
                 YT LID  ++   +  A ++YS M   G  PD++ Y VLI+GLC  G ++ A K
Sbjct: 708 PCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGK 767

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           +   M    + P  ++YN +I G+ KEGN   A RL  EM +KGLVP+  +Y 
Sbjct: 768 ILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYD 820



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 240/467 (51%), Gaps = 37/467 (7%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P   T+ +++   ++  +F +      E    +V ++V     LIKG C  GD+N A
Sbjct: 287 GWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSA 346

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             + +++ E+G +PNV I++ LI+ C K G++E+A  L+ ++  +GL  T      L+ G
Sbjct: 347 LRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKG 406

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K  L ++ +   +    NG++ S+ TYN ++   C  GKV+E   L+D+M  + +  +
Sbjct: 407 FRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPS 465

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           +V+YN +I G CK+  + +A  +++ +  +G+ PN ITY  L++G    G+ + AF +F+
Sbjct: 466 LVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFD 525

Query: 375 QLKSNG---------------------------------QS--PSVVTYNVLIRAFSKAG 399
           Q+ + G                                 QS  P+ +TYN +I  + K G
Sbjct: 526 QMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEG 585

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  + REM    I+P+ +TYT LI+ F +S+ M+ A +M+  M++ G   D+  Y 
Sbjct: 586 AIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYA 645

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI G C   +M+ A K F+ + E  L PN +VYN+MI  Y    N   AL L  EM   
Sbjct: 646 TLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINN 705

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  ++  Y+S I  L ++GK   A  L ++ML  G+ P + +YN+L
Sbjct: 706 KIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVL 752



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 156/630 (24%), Positives = 283/630 (44%), Gaps = 81/630 (12%)

Query: 20  MAKLPPLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           + K  P  A   F    ++ G   T   + ++L++L S  +  +H  A+ L+ K + G  
Sbjct: 70  LHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILAS--NPETHGDAKHLLNKYVFG-- 125

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
             S+   + L+  L +        ++ SR++  ++ +++++    +A+  F  ML+ GV 
Sbjct: 126 -DSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVV 184

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSE-------NRC---------------------- 169
           P     N LL  +I+    +     F E         C                      
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERY 244

Query: 170 -------KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP-------------- 208
                   ++LD  S+ I+I+  C   DL+ A +++   EE+G+ P              
Sbjct: 245 FGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVR 304

Query: 209 ---------------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
                                NV + TSLI G C  GD+  A  LF ++ E+G+      
Sbjct: 305 LGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAI 364

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           ++VLI    K G  +   E Y +M+  G+ P+++  N L+  +  +  +   + L D   
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +A +VVTYN ++  LC+  +V EA  L D+M   GI+P++++YN +I G C  G  D
Sbjct: 425 ENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMD 483

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  + N +  +G  P+ +TY +L+    K G+ + A ++  +M   GI P++ T+  +I
Sbjct: 484 DAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSII 543

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   +   + +A +  +   K  F P   TY  +I G   +G +  A  ++  M  +++ 
Sbjct: 544 NGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN + Y  +I G+CK      AL++  +M  KGL  +I  Y++ I   C+      A   
Sbjct: 604 PNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKF 663

Query: 548 LNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            +++L++GL P+  +YNI+   YR  NN+E
Sbjct: 664 FSKLLEVGLTPNTIVYNIMISAYRNLNNME 693



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 217/435 (49%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G++P     N LL    K    +  +L            V ++ I++   CE G +N+A 
Sbjct: 392 GLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEAC 451

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            + +++   G +P++V Y  +I G CK G ++ A  +   I E GL     TYT+L+ G 
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           FK G  +  F  +++M   G+ P+ YT+N +I+  C  G+VSE     +    +      
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +TYN +I G  KE  +  AE +  +M  + ISPNVITY  LI+GFC + + D A ++ + 
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +K  G    +  Y  LI  F K  + + A     ++ E G+TP+ + Y I+I ++   ++
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ME A  ++  M  +    D+  Y  LI GL  +G +  A  L++ M    + P+  +YN+
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G C  G    A ++L EM+   + P +  Y++ I    ++G   EA  L ++ML  G
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811

Query: 556 LKPSVSLYNILYRAK 570
           L P  + Y+IL   K
Sbjct: 812 LVPDDTTYDILVNGK 826



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 1/378 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
           ++A   + +M+  G+ P   ++N +++    K C  D   +        ++ +  ++ IL
Sbjct: 448 NEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           ++G  + GD   AF + +Q+   G  P    + S+I+G CK G +  A+       +   
Sbjct: 508 MEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSF 567

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + T  TY  +I G  K G        Y +M  + +SP++ TY  LI+ +C   K+    K
Sbjct: 568 IPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + D+M+ + +  ++  Y TLI G CK   ++ A +   ++   G++PN I YN +I  + 
Sbjct: 628 MHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYR 687

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           +    + A  L  ++ +N     +  Y  LI    K G    A DL  EM  RGI P   
Sbjct: 688 NLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIF 747

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y +LI+       +E A ++   M  +  +P V  Y  LI G   +GN++EA +L + M
Sbjct: 748 MYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEM 807

Query: 482 WETKLEPNDVVYNMMIFG 499
            +  L P+D  Y++++ G
Sbjct: 808 LDKGLVPDDTTYDILVNG 825



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 34/148 (22%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y S+ID  LK      AL  + +ML  G+ P                           
Sbjct: 712 KIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVP--------------------------- 744

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                  D++ + +LI G C  G L  A ++L +++    +P V++Y +LI G  K G++
Sbjct: 745 -------DIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICG 254
           + A  L  ++ + GLV    TY +L+ G
Sbjct: 798 QEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 228/452 (50%), Gaps = 4/452 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIK 183
           A+ +  QM   G++P   TFN L+      C  +  +   ++  +   + D  +   L++
Sbjct: 72  AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C  G + +A    + +    F  + V Y +LI+G CK+G+   A  L RKI  L LV 
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR 191

Query: 244 TQHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                YT +I    K+ L  D ++ Y +M +  + P++ T+N LI+ +C  G++ E   L
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +EM    V  NV T+N LI GLCKE  V++A  +L  M   G+ PNV+TY  L+DG+  
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             E +KA  +FN +   G +P+V +Y+V+I    K      A  L +EM  + +TP+ VT
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ LID   +S  +   +++   +   G   ++ TY  L++GLC    + +A  L   M 
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           +  ++P+   Y  ++ G CK G    A R+  ++  KG   NI  Y+  I  LC++G + 
Sbjct: 432 DEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
           EA  LL+QM   G  P    Y  L  A  KNN
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNN 523



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 225/424 (53%), Gaps = 2/424 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
           ++L  G +P + T N+LL  +  +    +   F     R +  LD  S+G LI G C++G
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 190 DLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           +   A ++L ++E +    P+V++YT++ID  CK+  +  A  L+ ++    +     T+
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G    G  K+      +M LN V+P++YT+N LI   C EG+V +   +   M  
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           + V  NVVTY +L+ G      V +A+ + + + + G++PNV +Y+ +I+G C     D+
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A +LF ++     +P+ VTY+ LI    K+G      DL+ E+  RG   + +TY  L++
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              ++  ++KA  + + M+  G  PD+ TY  L+ GLC  G +K+A +++  +       
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPL 472

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N  +Y +MI G CKEG    AL LL +M + G +P+  +Y + I  L ++ K  +A  LL
Sbjct: 473 NIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLL 532

Query: 549 NQML 552
            +M+
Sbjct: 533 REMI 536



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 184/336 (54%), Gaps = 1/336 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID+  K +L   A   + +M+   + P   TFNSL+  F I     +   L    
Sbjct: 196 MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   V  +VY+F ILI G C+ G++ KA  VL+ + + G  PNVV YTSL+DG     ++
Sbjct: 256 SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEV 315

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +AK +F  I   G+    H+Y+V+I GL KN +  +  + +++M L  ++P+  TY+ L
Sbjct: 316 NKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSL 375

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++S+ + L DE+ +R    N++TYN+L+ GLCK  +V +A  LL +MK  GI
Sbjct: 376 IDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ TY  L+DG C  G    A R++  L   G   ++  Y V+I    K G    A  
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           L+ +ME+ G  P  VTY  LI +  +++   KA ++
Sbjct: 496 LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 196/393 (49%), Gaps = 1/393 (0%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           ++ F  ++    +      A     Q+E  G  P +  +  LI+       +  A  +  
Sbjct: 53  IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LG      T   L+ GL  NG  K+   F++ +          +Y  LI+  C  G
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 295 KVSEGFKLFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           +     +L  ++     V  +V+ Y  +I   CK+  V +A  L  +M +  I PNV+T+
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI GFC  G+  +A  L N++  N  +P+V T+N+LI    K G  K A+ ++  M +
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P+ VTYT L+D +    ++ KA  +++ +   G +P+V++Y V+I+GLC    + E
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KLF  M    + PN V Y+ +I G CK G       L+ E+N +G   NI +Y+S + 
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC++ +  +A  LL +M   G++P +S Y  L
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTL 445



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 1/312 (0%)

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F + L      F   + +N  +P ++ +N ++                 +M  + +   +
Sbjct: 29  FIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEM 88

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            T+N LI       ++  A  ++ ++   G  P+ +T N L+ G C  G+  +A    + 
Sbjct: 89  FTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDH 148

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE-RGITPSEVTYTILIDSFVRSD 434
           +         V+Y  LI    K+G ++ A  L+R++E    + P  + YT +IDSF +  
Sbjct: 149 VIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDK 208

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +  A+++YS M      P+V T+  LI+G C+ G +KEA  L N M    + PN   +N
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFN 268

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I G CKEG   +A  +L  M ++G+ PN+ +Y+S +       +  +A+ + N +   
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328

Query: 555 GLKPSVSLYNIL 566
           G+ P+V  Y+++
Sbjct: 329 GVTPNVHSYSVM 340



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 1/206 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I+   K+++ D+A+  F +M    + P + T++SL+  + KS      W    E N
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 ++ ++  L+ G C+   ++KA  +L ++++ G  P++  YT+L+DG CKNG ++
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +++ +   G       YTV+I GL K G   +      +M+ NG  P   TY  LI
Sbjct: 457 DAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLI 516

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVAC 313
                  K  +  KL  EM  RE  C
Sbjct: 517 SALFKNNKNGKAVKLLREMIARESDC 542


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 234/484 (48%), Gaps = 38/484 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   +    D+A   F QM+D G+ P   T+N+++  + K+   D+    F +  
Sbjct: 307 YNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQML 366

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+    ++  LI G    G   +   +L ++      P+  IY  L+D  CKNG   
Sbjct: 367 DKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCT 426

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F               +V+  G+  + +  +    ++KM+  G+SP++  Y  LI
Sbjct: 427 EARNIFD--------------SVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALI 472

Query: 288 HEYCNEGKVSEGFKLFD-----------------------EMRHREVACNVVTYNTLICG 324
              C  G+V +    F+                       EM  + +  +VV +NTL+C 
Sbjct: 473 DALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCD 532

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LC+E RV EA+RL++ M   G+ P+VI+YN L+DG C  G TD+A +L + + S G  P+
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
             TYN L+  + KA     A  L+REM   G TP  VTY  ++    ++    +A E+Y 
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M  S    D+YTY ++++GLC    + EA K+F S+    L+ + + +N+MI    K G
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGG 712

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A+ L   ++  GLVP++ +Y      L ++G   E  VL + M + G  P+  + N
Sbjct: 713 KKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLN 772

Query: 565 ILYR 568
            L R
Sbjct: 773 ALVR 776



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 219/472 (46%), Gaps = 40/472 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCC 186
           F  +L +G R     FN LL  +  +   D+    L +         +V S+  L+KG C
Sbjct: 218 FGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFC 277

Query: 187 EAGDLNKAFEVLNQL-EEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                 +A E+L+ + ++ G S  P+VV Y ++I+G  + G +++A  LF ++ + G+  
Sbjct: 278 NENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPP 337

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY  +I GL K  +       +++M   GV PS  TYNCLIH Y + GK  E  +L 
Sbjct: 338 DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLL 397

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAER---------------------LLDQMK 342
           +EM   ++  +   Y  L+  LCK  R  EA                       + D+M+
Sbjct: 398 EEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMR 457

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+SPNV+ Y  LID  C  G  D A   FNQ+ +             +         +
Sbjct: 458 QQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE------------VYGLCTVEKWE 505

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A +LV EM ++GI    V +  L+    R   + +A  +  LM + G  PDV +Y  L+
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLV 565

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C+ G   EA+KL + M    L+PN+  YN ++ GYCK      A  LL EM   G  
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
           P++ +Y++ +  L Q G++ EA+ L   M+    +  +  YNI+     KNN
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 216/466 (46%), Gaps = 36/466 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++ID   K+++ D+A   F QMLD GV+P + T+N L+   + +  + +      E +
Sbjct: 342 YNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMS 401

Query: 168 RCKVELDVYSFGILIKGCCEAGD---------------------LNKAFEVLNQLEEMGF 206
              +E D + + +L+   C+ G                      +++A  + +++ + G 
Sbjct: 402 THDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGL 461

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           SPNVV Y +LID  CK G ++ A + F + I E+  + T   +             +   
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKW-------------EKAE 508

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E   +M   G+   +  +N L+ + C EG+V E  +L + M    V  +V++YNTL+ G 
Sbjct: 509 ELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGH 568

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C   R  EA +LLD M   G+ PN  TYN L+ G+C A   D A+ L  ++  NG +P V
Sbjct: 569 CLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDV 628

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTYN ++    + G    A +L   M          TY I+++   +++ +++AF+M+  
Sbjct: 629 VTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQS 688

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           +   G    + T+ ++I  L   G  ++A  LF ++    L P+   Y ++     KEG+
Sbjct: 689 LCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 748

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
                 L   M E G  PN    ++ +      G    A   L+++
Sbjct: 749 LEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 221/493 (44%), Gaps = 59/493 (11%)

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNT-FNSLLIFVIKSCS-------------FDKG 160
           A   S  S  AL  F  +L    RP S T FN LL  V ++               FD+ 
Sbjct: 125 AQSGSLASHDALKLFDLLLPHA-RPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDR- 182

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                E   KV  D  ++ ILI   C  G L   F V   + + G+  N +++  L+ G 
Sbjct: 183 --MVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGL 240

Query: 221 CKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVS- 277
           C    ++ A  +L  ++ E G      +Y  L+ G       ++  E    M  + G+S 
Sbjct: 241 CDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC 300

Query: 278 -PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P + +YN +I+ +  EG+V + + LF +M  R +  +VVTYNT+I GLCK   V  A+ 
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +  QM   G+ P+  TYN LI G+   G+  +  RL  ++ ++   P    Y +L+    
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G    A ++   +  +GI P  +              +++A  ++  M++ G SP+V 
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVV 466

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSM------------WETKLE-----------PNDVVY 493
            YG LI  LC  G + +A   FN M            WE   E            + VV+
Sbjct: 467 NYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVF 526

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++   C+EG    A RL+  M   G+ P++ SY++ +   C  G+  EA  LL+ M+ 
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 554 LGLKPSVSLYNIL 566
           +GLKP+   YN L
Sbjct: 587 IGLKPNEFTYNTL 599



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 24/350 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQM-----------------------LDSGVRPRSNTFN 145
           Y ++IDA  K    D A+  F+QM                       LD G+R     FN
Sbjct: 468 YGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFN 527

Query: 146 SLLIFVIKSCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +L+  + +     +   L     R  V  DV S+  L+ G C  G  ++A ++L+ +  +
Sbjct: 528 TLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI 587

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PN   Y +L+ G CK   I+ A  L R++   G      TY  ++ GLF+ G   + 
Sbjct: 588 GLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEA 647

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            E Y  M  +     +YTYN +++  C    V E FK+F  +  + +  +++T+N +I  
Sbjct: 648 KELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGA 707

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L K  + ++A  L   +   G+ P+V TY  + +     G  ++   LF+ ++ NG +P+
Sbjct: 708 LLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN 767

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
               N L+R F   G+   A   + +++E+  +    T ++LI  + R +
Sbjct: 768 SRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGE 817



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 34/299 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D H  +  +D+A      M+  G++P   T+N+LL                    
Sbjct: 561 YNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL-------------------- 600

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                          G C+A  ++ A+ +L ++   G +P+VV Y +++ G  + G    
Sbjct: 601 --------------HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           AK L+  +         +TY +++ GL KN    + F+ ++ +   G+   + T+N +I 
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                GK  +   LF  +    +  +V TY  +   L KE  ++E   L   M+  G +P
Sbjct: 707 ALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAP 766

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           N    N L+  F   G+  +A    ++L     S    T ++LI  +S+    ++A  L
Sbjct: 767 NSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSL 825


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 241/492 (48%), Gaps = 36/492 (7%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----------- 159
           S+I  H K+     AL  F +M   G  P S TF+ L+ +  K+   +K           
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403

Query: 160 --------------GWL----------FFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
                         GWL           F E+      +V+    ++   C+ G  ++A 
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           E+L+++E  G  PNVV Y +++ G C+  +++ A+++F  I E GL    +TY++LI G 
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-N 314
           F+N  +++  E    M  + +  +   Y  +I+  C  G+ S+  +L   M   +  C +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            ++YN++I G  KE  +  A    ++M   GISPNVITY  L++G C     D+A  + +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++K+ G    +  Y  LI  F K  N + AS L  E+ E G+ PS+  Y  LI  F    
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           +M  A ++Y  M K G   D+ TY  LI GL   GN+  AS+L+  M    L P++++Y 
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           +++ G  K+G   + +++  EM +  + PN+  Y++ I    ++G   EA  L ++ML  
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823

Query: 555 GLKPSVSLYNIL 566
           G+ P  + ++IL
Sbjct: 824 GILPDGATFDIL 835



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 200/393 (50%), Gaps = 2/393 (0%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
           +D+A     +M   G+ P   ++N++++   +  + D   + FS    K ++ + Y++ I
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGEL 239
           LI GC    D   A EV+N +       N V+Y ++I+G CK G   +A+ +L   I E 
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            L  +  +Y  +I G FK G        YE+M  NG+SP++ TY  L++  C   ++ + 
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            ++ DEM+++ V  ++  Y  LI G CK   ++ A  L  ++   G++P+   YN LI G
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F + G    A  L+ ++  +G    + TY  LI    K GN  +AS+L  EM+  G+ P 
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           E+ YT++++   +     K  +M+  M+K+  +P+V  Y  +I G   +GN+ EA +L +
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            M +  + P+   +++++ G        RA  L
Sbjct: 819 EMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 159/647 (24%), Positives = 284/647 (43%), Gaps = 84/647 (12%)

Query: 2   AQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSS 60
           A+ +Q +  ++   L++R     P  A   +NWA   +G         +++ +L+S  S 
Sbjct: 65  AKPEQKDDASVIDVLLNRRNN--PEAALRFYNWARPWRGSFEDGDVFWVLIHILVS--SP 120

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
            ++  A  L+++ +S    +S+ TP +  L+  L     S    V  SR +  +++A+ K
Sbjct: 121 ETYGRASDLLIRYVS----TSNPTPMASVLVSKLVDSAKSFGFEVN-SRAFNYLLNAYSK 175

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYS 177
            R +D A+   +QML+  V P     N  L  +++  S  +    +S      V+ D  +
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
             +L++         +A EVL++  E G  P+ ++Y+  +  CCK  D+  A  L R++ 
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295

Query: 238 ELGL-VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           E  L V +Q TYT +I    K G   D     ++M  +G+S ++     LI  +C    +
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                LFD+M     + N VT++ LI    K   +++A     +M++ G++P+V   + +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415

Query: 357 IDGF----------------------------------CDAGETDKAFRLFNQLKSNGQS 382
           I G+                                  C  G+TD+A  L ++++S G  
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VV+YN ++    +  N  +A  +   + E+G+ P+  TY+ILID   R+ D + A E+
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK----------------- 485
            + M  S    +   Y  +I+GLC  G   +A +L  +M E K                 
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595

Query: 486 -------------------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                              + PN + Y  ++ G CK     +AL +  EM  KG+  +I 
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +Y + I   C+      A  L +++L+ GL PS  +YN L     N+
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 250/516 (48%), Gaps = 50/516 (9%)

Query: 45  QSISIILRLLLSKMSS--HSHAAAQTLILKIISGRITSSSFTP----RSLLCHLTQLFPS 98
           QS+ +IL   +    S    H AAQ      I  R+      P    R+ L +    +PS
Sbjct: 132 QSLRVILDTSIGAYVSCNRPHHAAQ------IFNRMKRLHLKPNLLTRNTLINALVRYPS 185

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
             +      ++ ++I   +K++LS +A+    +M D    P + ++N++L         D
Sbjct: 186 KPSVCLSKAIFTNVIKFGVKNKLS-EAIGLIGKMKDFSCFPDNASYNTIL---------D 235

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
             WL                       C +G  +++ + LN+L E G  P+ + Y ++I 
Sbjct: 236 VLWL-----------------------CRSGKTDQSIDKLNELLESGLVPHQITYNTIIH 272

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C+ G +E+A     K+ E        T  +L+ GL   G+  +  + +      G + 
Sbjct: 273 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 332

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERL 337
              TYN +I   C EG+  E F L  EM  +++  +  TYN ++C L   E +V++A + 
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQF 392

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M      P++ T N L+ G C  G  D A +LFN   S G++   VTYN +I    K
Sbjct: 393 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452

Query: 398 AGNSKMASDLVREMEER-GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
            G  + A DL+ EMEE+ G+ P + TY  +I  + R   +EKAF+  + M +  F PD++
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF 512

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGE 515
           T  +L+ GLC +G + +A KLFN+ W +K +  D V YN +I G CKEG    A  LL E
Sbjct: 513 TCNILLRGLCREGMLVKALKLFNT-WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 571

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           M EK L P+  +Y++ +  L   G+  EAE  ++++
Sbjct: 572 MKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 196/381 (51%), Gaps = 19/381 (4%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A ++ N+++ +   PN++   +LI+             L R   +  +  ++  +T +I 
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINA------------LVRYPSKPSVCLSKAIFTNVIK 201

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY--CNEGKVSEGFKLFDEMRHREV 311
              KN L  +      KM+     P   +YN ++     C  GK  +     +E+    +
Sbjct: 202 FGVKNKLS-EAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGL 260

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             + +TYNT+I G C+E +V++A +  ++M      P++ T N L+ G C  G  D A +
Sbjct: 261 VPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 320

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LFN   S G++   VTYN +I    K G  + A DL+ EMEE+ + P   TY  ++ +  
Sbjct: 321 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALA 380

Query: 432 RSD-DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++  +EKAF+  + M +  F PD++T  +L+ GLC +G +  A KLFN+ W +K +  D
Sbjct: 381 DAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT-WISKGKAID 439

Query: 491 -VVYNMMIFGYCKEGNSYRALRLLGEMNEK-GLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
            V YN +I G CKEG    A  LL EM EK GLVP+  +Y++ I   C++G+  +A    
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFR 499

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           N+M++   KP +   NIL R 
Sbjct: 500 NKMVEKSFKPDLFTCNILLRG 520



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 27/266 (10%)

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDG----------------------FCDAGETD 367
           R   A ++ ++MK   + PN++T N LI+                       F    +  
Sbjct: 150 RPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLS 209

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAF--SKAGNSKMASDLVREMEERGITPSEVTYTI 425
           +A  L  ++K     P   +YN ++      ++G +  + D + E+ E G+ P ++TY  
Sbjct: 210 EAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNT 269

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I  + R   +EKAF+  + M +  F PD++T  +L+ GLC +G +  A KLFN+ W +K
Sbjct: 270 IIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT-WISK 328

Query: 486 LEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-DGKWPE 543
            +  D V YN +I G CKEG    A  LL EM EK L P+  +Y++ +  L   +G+  +
Sbjct: 329 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEK 388

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A    N+M++   KP +   NIL R 
Sbjct: 389 AFQFRNKMVEKSFKPDLFTCNILLRG 414


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 203/383 (53%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +   LIKG C  G++ KA    +Q+   GF  N V Y +LI+G CK G+ +    L RK+
Sbjct: 135 TLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKL 194

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +      Y  +I  L KN L  D  + Y +M + G+SP++ TYN L++ +C  G +
Sbjct: 195 EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHL 254

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E F L +EM+ + +  +V T+NTLI  L KE +++ A+ +L  M  A I P+V+TYN L
Sbjct: 255 KEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG+    +   A  +F  +  +G +P+V TY  +I    K      A  L  EM+ + +
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTYT LID   ++  +E+A  +   M++ G  PDVY+Y +L+  LC  G ++ A +
Sbjct: 375 IPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKE 434

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            F  +       N   YN+MI G CK      A+ L  +M  KG +P+  ++ + I  L 
Sbjct: 435 FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALF 494

Query: 537 QDGKWPEAEVLLNQMLKLGLKPS 559
           +  +  +AE +L +M+  GL+ +
Sbjct: 495 EKDENDKAEKILREMIARGLQEA 517



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 238/473 (50%), Gaps = 26/473 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           + ++IDA  K      A      M+ + ++P   T+NSL+   F +      K ++F+S 
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK-YVFYSM 334

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  V  +V ++  +I G C+   +++A  +  +++     P++V YTSLIDG CKN  +
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERA  L +K+ E G+    ++YT+L+  L K G  ++  EF++++ + G   ++ TYN +
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL--------------------- 325
           I+  C      E   L  +M  +    + +T+ T+IC L                     
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 326 --CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
              +++R++EA+ +L  M  A I P+V+TY  L+DG+    E   A  +F  +   G +P
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +V  Y ++I    K      A  L  EM+ + + P+ VTYT LID+  ++  +E+A  + 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M++ G  PDVY+Y +L+ GLC  G ++ A ++F  +       N  VY  MI   CK 
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           G    AL L  +M +KG +P+  ++   I  L +  +  +AE +L +M+  GL
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 241/518 (46%), Gaps = 61/518 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+  +        ++    V+P    +N+++  + K+         +SE  
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  +V ++  L+ G C  G L +AF +LN+++    +P+V  + +LID   K G ++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICG-LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            AK++   + +  +     TY  LI G  F N ++   + FY   Q +GV+P++ TY  +
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ-SGVTPNVRTYTTM 349

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C E  V E   LF+EM+++ +  ++VTY +LI GLCK   ++ A  L  +MK  GI
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG------- 399
            P+V +Y  L+D  C  G  + A   F +L   G   +V TYNV+I    KA        
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469

Query: 400 -NSKM---------------------------ASDLVREMEERG---------------- 415
             SKM                           A  ++REM  RG                
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529

Query: 416 -------ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
                  I P  VTY  L+D +   ++++ A  ++  M + G +P+V  Y ++I GLC K
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKK 589

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             + EA  LF  M    + PN V Y  +I   CK  +  RA+ LL EM E G+ P++ SY
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  LC+ G+   A+ +  ++L  G   +V +Y  +
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 195/393 (49%), Gaps = 35/393 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +  IL+   C    +  AF VL  + + G+ PN +   +LI G C  G+I++A  L+
Sbjct: 97  DLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA--LY 154

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
                                 F + +   GF      QLN VS     Y  LI+  C  
Sbjct: 155 ----------------------FHDQVVAQGF------QLNQVS-----YRTLINGLCKT 181

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+     +L  ++    V  +VV YNT+I  LCK   + +A  L  +M + GISPNV+TY
Sbjct: 182 GETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTY 241

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+ GFC  G   +AF L N++K    +P V T+N LI A  K G  K A  ++  M +
Sbjct: 242 NALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMK 301

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             I P  VTY  LID +   + ++ A  ++  M +SG +P+V TY  +I GLC +  + E
Sbjct: 302 ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDE 361

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  LF  M    + P+ V Y  +I G CK  +  RA+ L  +M E+G+ P++ SY+  + 
Sbjct: 362 AMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLD 421

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+ G+   A+    ++L  G   +V  YN++
Sbjct: 422 ALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 211/438 (48%), Gaps = 24/438 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID +        A + F+ M  SGV P   T+ +++  + K    D+    F E +
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  + D+ ++  LI G C+   L +A  +  +++E G  P+V  YT L+D  CK G +E
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK  F+++   G      TY V+I GL K  L  +  +   KM+  G  P   T+  +I
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490

Query: 288 HEYCNEGKVSEGFKLFDEMRHREV--------------------AC---NVVTYNTLICG 324
                + +  +  K+  EM  R +                    AC   +VVTY TL+ G
Sbjct: 491 CALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
                 ++ A+ +   M   G++PNV  Y  +IDG C     D+A  LF ++K     P+
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPN 610

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +VTY  LI A  K  + + A  L++EM+E GI P   +YTIL+D   +S  +E A E++ 
Sbjct: 611 IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            +   G+  +V  Y  +I+ LC  G   EA  L   M +    P+ V ++++I+   ++ 
Sbjct: 671 RLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKD 730

Query: 505 NSYRALRLLGEMNEKGLV 522
            + +A ++L EM  +GL+
Sbjct: 731 ENDKAEKILXEMIARGLM 748



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 222/496 (44%), Gaps = 30/496 (6%)

Query: 99  SSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S N VT + L Y   I  HLK     +A    ++M    + P   TFN+L+  + K    
Sbjct: 235 SPNVVTYNALVYGFCIMGHLK-----EAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM 289

Query: 158 DKGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
               +  +   +  ++ DV ++  LI G      +  A  V   + + G +PNV  YT++
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           IDG CK   ++ A  LF ++    ++    TYT LI GL KN   +      +KM+  G+
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P +Y+Y  L+   C  G++    + F  +  +    NV TYN +I GLCK     EA  
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-------------- 382
           L  +M+  G  P+ IT+  +I    +  E DKA ++  ++ + G                
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529

Query: 383 ---------PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
                    P VVTY  L+  +      K A  +   M + G+TP+   YTI+ID   + 
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKK 589

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +++A  ++  M+     P++ TY  LI  LC   +++ A  L   M E  ++P+   Y
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            +++ G CK G    A  +   +  KG   N+  Y++ I  LC+ G + EA  L  +M  
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 554 LGLKPSVSLYNILYRA 569
            G  P    ++I+  A
Sbjct: 710 KGCMPDAVTFDIIIWA 725



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 151/295 (51%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+  T N LI   C  G++ +     D++  +    N V+Y TLI GLCK    +  
Sbjct: 128 GYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAV 187

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            RLL +++   + P+V+ YN +I   C       A  L++++   G SP+VVTYN L+  
Sbjct: 188 ARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYG 247

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G+ K A  L+ EM+ + I P   T+  LID+  +   M+ A  + ++M K+   PD
Sbjct: 248 FCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPD 307

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  LI G      +K A  +F SM ++ + PN   Y  MI G CKE     A+ L  
Sbjct: 308 VVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFE 367

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM  K ++P+I +Y+S I  LC++     A  L  +M + G++P V  Y IL  A
Sbjct: 368 EMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 138/299 (46%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +++M L    P  + +N ++    N         LF +        ++ T N L+   C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              +  A  +L  +   G  PN IT N LI G C  GE  KA    +Q+ + G   + V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  LI    K G +K  + L+R++E   + P  V Y  +I S  ++  +  A ++YS M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G SP+V TY  L++G C+ G++KEA  L N M    + P+   +N +I    KEG   
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  +L  M +  + P++ +Y+S I       K   A+ +   M + G+ P+V  Y  +
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 107/232 (46%)

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            D+M +    P    +N ++    +         LF + +SNG +P + T N+L+  F  
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
             +   A  ++  + +RG  P+ +T   LI       +++KA   +  +   GF  +  +
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI+GLC  G  K  ++L   +    ++P+ V+YN +I   CK      A  L  EM 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            KG+ PN+ +Y++ +   C  G   EA  LLN+M    + P V  +N L  A
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 227/459 (49%), Gaps = 3/459 (0%)

Query: 119  SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVY 176
            +++  QA+  F+Q+     +P +  +NS++I ++    ++K    ++E   +     D  
Sbjct: 1162 AKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTV 1221

Query: 177  SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            ++  LI   C+ G  + A ++LN+++E+G  P   IYT LI    K  D   A  LF ++
Sbjct: 1222 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 1281

Query: 237  GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                      TYT LI GL K G   + + F+ +MQ  G  P     N +I+     G++
Sbjct: 1282 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 1341

Query: 297  SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
             +  KLF EM       +VVTYNT+I  L + + R  E     ++MK +GISP+  TY+ 
Sbjct: 1342 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 1401

Query: 356  LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
            LIDGFC     +KA  L  ++   G  P    Y  LI A  KA    +A +L +E++E  
Sbjct: 1402 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 1461

Query: 416  ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             + S   Y ++I    ++  ++ A  M+  M K G +PDVY Y  L+ GL   G + EA 
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521

Query: 476  KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                 M E    P+   YN+++ G  K G  +RA+ +L  M +  + P++ SY++ +G L
Sbjct: 1522 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 1581

Query: 536  CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
               G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 1582 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 1620



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 192/401 (47%), Gaps = 2/401 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y ++I A  K    D A+   ++M + G++P +  +  L+    K          F E R
Sbjct: 1223 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 1282

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             +    DV+++  LI+G  +AG +++A+    +++  G  P+ V   ++I+   K G ++
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-FYEKMQLNGVSPSLYTYNCL 286
             A  LF+++  L  + +  TY  +I  LF++  +      ++E+M+ +G+SPS +TY+ L
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 1402

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I  +C   ++ +   L +EM  +        Y +LI  L K  R   A  L  ++K    
Sbjct: 1403 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 1462

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            S +   Y  +I     AG  D A  +F+++   G +P V  YN L+   ++ G    A  
Sbjct: 1463 SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 1522

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
             +R M+E G  P   +Y I+++   ++    +A EM S M++S   PDV +Y  ++  L 
Sbjct: 1523 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALS 1582

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
              G  +EASKL   M     E + + Y+ ++    K  + Y
Sbjct: 1583 HAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEY 1623



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 160/371 (43%), Gaps = 39/371 (10%)

Query: 101  NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
             P TK  +Y  +I    K   +  AL  F +M     RP   T+  L+  + K+   D+ 
Sbjct: 1252 QPTTK--IYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 1309

Query: 161  WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE----------------- 202
            + FF E  R     D      +I    +AG L+ A ++  ++E                 
Sbjct: 1310 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 1369

Query: 203  -------------------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                               E G SP+   Y+ LIDG CK   +E+A ML  ++ E G   
Sbjct: 1370 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 1429

Query: 244  TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                Y  LI  L K        E +++++ N  S S   Y  +I      G++ +   +F
Sbjct: 1430 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMF 1489

Query: 304  DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            DEM     A +V  YN L+ GL +   + EA   + +M+  G  P++ +YN +++G    
Sbjct: 1490 DEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 1549

Query: 364  GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            G   +A  + + +K +   P VV+YN ++ A S AG  + AS L++EM   G     +TY
Sbjct: 1550 GGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 1609

Query: 424  TILIDSFVRSD 434
            + ++++  + D
Sbjct: 1610 SSILEAIGKVD 1620


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 244/464 (52%), Gaps = 6/464 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +++ A  K+   D+A     +M+  G  P + TF++L+  + K  S ++ +    +  
Sbjct: 81  YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 140

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     D     I+ + C +   +  A +VL  +   GF+P V+++  +I+G CK  D+
Sbjct: 141 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 200

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L   + E G V    T+T+LI GL K     +  +  EKM   G SP++ TY+ +
Sbjct: 201 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C +G+V + ++LF  M  R    NVVT+N LI GLCK  R++EA +L  +M+  G 
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS-VVTYNVLIRAFSKAGNSKMAS 405
           +P++ITYN LIDG C + + D+AF+LF  +  +G S +  VTY+ L   ++  G    A 
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   + ++G +P   TYT LI  + ++    +  E+   M   GF P V T   ++ GL
Sbjct: 381 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 440

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM---NEKGLV 522
               + + A +LF+SM       + ++YN+++ G  +     +AL +L ++    ++   
Sbjct: 441 FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFN 500

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+ ++  + +  LCQ G+  +A+ LL++M + G   +VS YN L
Sbjct: 501 PSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGL 544



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 204/398 (51%), Gaps = 8/398 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  L+   C+AG  ++A  +L ++   G +P+ V +++LIDG CK G  E+A  + 
Sbjct: 77  DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 136

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ----LNGVSPSLYTYNCLIHE 289
             + + G+  +   +  +I  L     + +  E   K+       G +P++  +N +I+ 
Sbjct: 137 EDVIQRGMGNSDAAFETIIQRLCN---KYNSVELASKVLGVVIAKGFTPTVLMFNLVING 193

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C    +   +KL + M  +    NV T+  LI GLCK  RV EA++LL++M   G SPN
Sbjct: 194 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPN 253

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY+ +I+G C  G+ D A+ LF  ++     P+VVT+N+LI    KA   + A  L  
Sbjct: 254 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 313

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS-PDVYTYGVLIHGLCMK 468
            M E G  P  +TY  LID   +S  +++AF+++  + +SG S  +  TY  L HG    
Sbjct: 314 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 373

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M +A ++F+ + +    P+   Y  +I  YCK   +   + L+ EM  KG  P + + 
Sbjct: 374 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S+ +G L +      A  L + M   G      +YN++
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLV 471



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 255/547 (46%), Gaps = 35/547 (6%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +AF +     ++G+ ++  +   I++ L +K +S   A+        + G + +  FTP 
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK-------VLGVVIAKGFTPT 183

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L+ +L                   +I+   K++  D A      M++ G  P   TF  
Sbjct: 184 VLMFNL-------------------VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224

Query: 147 LLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           L+  + K+    +      +     C    +V ++  +I G C+ G ++ A+E+   +E 
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSP--NVVTYSTVINGLCKQGQVDDAYELFQLMER 282

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
               PNVV +  LIDG CK   IE A+ L+ ++ E G      TY  LI GL K+    +
Sbjct: 283 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 342

Query: 264 GFEFYEKMQLNGVSPS-LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            F+ ++ +  +GVS +   TY+ L H Y   G++++  ++F  +  +  + ++ TY +LI
Sbjct: 343 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              CK  R  E   L+++M   G  P V T + ++ G  +   T++A +LF+ + + G +
Sbjct: 403 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 462

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREM---EERGITPSEVTYTILIDSFVRSDDMEKA 439
              + YN+++   ++A     A  ++ ++    +R   PS      L++S  +    + A
Sbjct: 463 DDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDA 522

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            ++   M + GF+  V +Y  L+ GL       EA+++F +M      P     N++I  
Sbjct: 523 KQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 582

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            C       A  L+  M++ G  P+I + ++ IG  C+ G+   A  LL +M + GL+P+
Sbjct: 583 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642

Query: 560 VSLYNIL 566
            + +++L
Sbjct: 643 DTTHDLL 649



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 182/396 (45%), Gaps = 38/396 (9%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PN   Y  LI G    GD++ A  L  ++   G       +T L+ GL   G   +  E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +  M  +  +P + TY  L+H  C  GK  E   +  EM  R  A + VT++TLI GLCK
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 328 ------EMRVQE------------------------------AERLLDQMKMAGISPNVI 351
                   RV E                              A ++L  +   G +P V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            +N +I+GFC A + D A++L   +   G  P+V T+ +LI    KA     A  L+ +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G +P+ VTY+ +I+   +   ++ A+E++ LM++    P+V T+ +LI GLC    +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIASYSS 530
           +EA +L++ M ET   P+ + YN +I G CK      A +L   + E G+   N  +YS+
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                   G+  +A  + + ++  G  P ++ Y  L
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 43/256 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I  + K+  + + +    +M   G  PR NT +++L  + +    ++    F    
Sbjct: 398 YTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMA 457

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGFSPNVVIYTSLIDGCCKNG 224
            +    D   + ++++G   A   NKA  VL Q+    +  F+P+     +L++  C+ G
Sbjct: 458 ARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVG 517

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK---------------------- 262
             + AK L  K+ E G  A   +Y  L+ GL +  LQ+                      
Sbjct: 518 RTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSR--LQRWDEATQVFEAMVSAGPAPEIST 575

Query: 263 ---------------DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                          D +E  ++M   G  P + T N LI  YC  G+     KL +EM 
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635

Query: 308 HREVACNVVTYNTLIC 323
              +  N  T++ L C
Sbjct: 636 EAGLEPNDTTHDLLEC 651



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 27/229 (11%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS-HAAAQTLILKIISGRITSSSFTP 85
           +A  LF+  + +G        ++I  L++  M+  S H  A  ++ ++I  R     F P
Sbjct: 448 RAIQLFDSMAARGCTDD----ALIYNLVVEGMARASKHNKALAVLEQVIDKR--DRKFNP 501

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                        SS+ V      ++++++  +   +D A    H+M + G     +++N
Sbjct: 502 -------------SSSAV------DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYN 542

Query: 146 SLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
            LL  + +   +D+   +F +        ++ +  ++I   C A  ++ A+E++ ++ ++
Sbjct: 543 GLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL 602

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           G  P++    +LI G CK+G  + A+ L  ++ E GL     T+ +L C
Sbjct: 603 GCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 651


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 232/466 (49%), Gaps = 2/466 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I++A  K+  ++ A  +  ++L  G    S+   SLL+   +  +       F    
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +V    +  S+ ILI G CE G L +AF + +Q+ E G  P+   YT LI   C  G I
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A  LF ++   G     HTYTVLI GL ++G  ++      KM  + + PS+ TYN L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC +G+V   F+L   M  R    NV T+N L+ GLC+  +  +A  LL +M   G+
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP++++YN LIDG C  G  + A++L + +      P  +T+  +I AF K G + +AS 
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +  M  +GI+  EVT T LID   +      A  +   + K       ++  V++  L 
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               +KE   +   + +  L P+ V Y  ++ G  + G+   + R+L  M   G +PN+ 
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            Y+  I  LCQ G+  EAE LL+ M   G+ P+   Y ++ +   N
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 229/508 (45%), Gaps = 55/508 (10%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFF 164
           +R Y  +I A     L D+A   F +M+  G +P  +T+  L+  + +    ++   +  
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              + ++   V ++  LI G C+ G +  AFE+L  +E+    PNV  +  L++G C+ G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
              +A  L +++ + GL     +Y VLI GL + G     ++    M    + P   T+ 
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---------------EM 329
            +I+ +C +GK          M  + ++ + VT  TLI G+CK               +M
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540

Query: 330 R--------------------VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           R                    V+E   +L ++   G+ P+V+TY  L+DG   +G+   +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           FR+   +K +G  P+V  Y ++I    + G  + A  L+  M++ G++P+ VTYT+++  
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG--LCMKG--NMKEASKLFNSMWETK 485
           +V +  +++A E    M + G+  +   Y  L+ G  L  KG  N +E++    ++ ET 
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD 720

Query: 486 LE-PNDVVYNMMIFG-------------YCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            E  N+++  +   G              CKEG +  +  L+  + E+G+    A     
Sbjct: 721 PECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDII 779

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +   C   K  +   L+  +LK G  PS
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPS 807



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 10/349 (2%)

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           D  +   L + I   GL    H   V +   C   +  + K  + F E  ++ G   +  
Sbjct: 102 DPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYP 161

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREV---ACNVVTYNTLICGLCKEMRVQEAERLL 338
            Y+ L+       K+  GF  +   R  E       ++ Y T++  LCK    + AE  +
Sbjct: 162 CYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSK 397
            ++   G   +      L+ GFC       A ++F+ + K    +P+ V+Y++LI    +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  L  +M E+G  PS  TYT+LI +      ++KAF ++  M   G  P+V+T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y VLI GLC  G ++EA+ +   M + ++ P+ + YN +I GYCK+G    A  LL  M 
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++   PN+ +++  +  LC+ GK  +A  LL +ML  GL P +  YN+L
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 228/541 (42%), Gaps = 77/541 (14%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           KAF+LF+    +G +    + ++++  L           A  +  K++  RI  S  T  
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE---ANGVCRKMVKDRIFPSVITYN 375

Query: 87  SLL---CHLTQLFPS----------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
           +L+   C   ++ P+          +  P    R +  +++   +     +A+    +ML
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKP--NVRTFNELMEGLCRVGKPYKAVHLLKRML 433

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLN 192
           D+G+ P   ++N L+  + +    +  +   S   C  +E D  +F  +I   C+ G  +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A   L  +   G S + V  T+LIDG CK G    A  +   + ++ ++ T H+  V++
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K    K+      K+   G+ PS+ TY  L+      G ++  F++ + M+     
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV  Y  +I GLC+  RV+EAE+LL  M+ +G+SPN +TY  ++ G+ + G+ D+A   
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673

Query: 373 FNQLKSNGQSPSVVTYNVLIRAF------------------------------------- 395
              +   G   +   Y+ L++ F                                     
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733

Query: 396 ----------------SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
                            K G +  ++DLV+ + ERG+   E    I+++S+       K 
Sbjct: 734 LGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKC 792

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            E+ +L+ KSGF P   ++ ++I GL  +G+ + A +L   +    L  N VV    +  
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL----LTSNGVVEKSGVLT 848

Query: 500 Y 500
           Y
Sbjct: 849 Y 849


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 219/460 (47%), Gaps = 26/460 (5%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGD 190
           M+  G  P    FNSL+    +S  +   +    +   C  +     + ILI G C   D
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 191 LNKAFEVL-------NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           L  + EV+       N++ EMG   N V   +     C  G  E+A  + R++   G + 
Sbjct: 62  L-PSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY+ +I  L      +  F+ +++M+ NG++P +YTY  L+  +C  G + +    F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           DEM+    A NVVTY  LI    K  ++  A  + + M   G  PN++TY  LIDG C A
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 364 GETDKAFRLFNQLKSNG-----------------QSPSVVTYNVLIRAFSKAGNSKMASD 406
           GET+KA +++ ++K++                  + P+VVTY  L+    KA   K A D
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+  M   G  P+++ Y  LID F +   +++A E+++ M   G SP+VYTY  LI  L 
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF 360

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               +  A K+   M E    PN V+Y  M+ G CK G +  A RL+  M EKG  PN+ 
Sbjct: 361 KDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVV 420

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y++ I    + G+      LL  M   G  P+   Y +L
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 18/396 (4%)

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           CC  G   KA+ V+ ++   GF P+   Y+ +I   C    +E+A  LF+++   G+   
Sbjct: 98  CC-IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPD 156

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
            +TYT L+    K GL +    ++++MQ +G +P++ TY  LIH Y    K+S   ++F+
Sbjct: 157 VYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFE 216

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS----------------- 347
            M       N+VTY  LI G CK    ++A ++  +MK   +                  
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY  L+DG C A +  +A  L   +   G  P+ + Y+ LI  F K G    A ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M   G +P+  TY+ LID   +   ++ A ++ + M ++  +P+V  Y  ++ GLC 
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   EA +L   M E    PN V Y  MI G+ K G   R L LL  M  KG  PN  +
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           Y   I   C  G   +A  LL +M +      + +Y
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMY 492



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 213/468 (45%), Gaps = 25/468 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y +++D   K  L +QA  +F +M   G  P   T+ +L+   +K+    +    F    
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE---------EMGF--------SP 208
            N C   +  Y+   LI G C+AG+  KA ++  +++         ++ F         P
Sbjct: 220 SNGCVPNIVTYT--ALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEP 277

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           NVV Y +L+DG CK   ++ A+ L   +   G    Q  Y  LI G  K G   +  E +
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            KM  +G SP++YTY+ LI +   + ++    K+  +M     A NVV Y  ++ GLCK 
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKV 397

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            +  EA RL+  M+  G  PNV+TY  +IDGF  AG  D+   L   + S G +P+ +TY
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITY 457

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            VLI     AG    A  L+ EM++         Y  +I+ F  S +   +  + + + +
Sbjct: 458 RVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSE 515

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P +  Y +LI      G ++ A +L   +        +  Y  +I          +
Sbjct: 516 DGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKVDK 574

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           A +L  +M  +G VP ++     I  L + GKW EA  L + + ++ +
Sbjct: 575 AFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 139/335 (41%), Gaps = 37/335 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y+++ID   K    D+A   F +ML  G  P   T++SL+         DK    F + 
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI---------DK---LFKDK 363

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R                      L+ A +VL ++ E   +PNVVIYT ++DG CK G  +
Sbjct: 364 R----------------------LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   + E G      TYT +I G  K G      E  + M   G +P+  TY  LI
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  G + +  KL +EM+      ++  Y  +I G   E        LL ++   G  
Sbjct: 462 NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLG--LLAELSEDGSV 519

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P +  Y  LID F  AG  + A  L  +L S   +    TY  LI + + A     A  L
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKL 578

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
             +M  RG  P       LI   +R    E+A ++
Sbjct: 579 YSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 6/198 (3%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           + G  PS + +N L+ A+ ++G+   A  L+++M   G  P  V Y ILI     ++D+ 
Sbjct: 4   TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLP 63

Query: 438 K------AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
                  A   Y+ M + G   +          LC  G  ++A  +   M      P+  
Sbjct: 64  SMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSS 123

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+ +I   C      +A +L  EM   G+ P++ +Y++ +   C+ G   +A    ++M
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183

Query: 552 LKLGLKPSVSLYNILYRA 569
            + G  P+V  Y  L  A
Sbjct: 184 QQDGCAPNVVTYTALIHA 201



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 41/163 (25%)

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE- 503
           +M   G  P    +  L+H  C  G+   A KL   M     +P  VVYN++I G C   
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 504 ----------------------------------------GNSYRALRLLGEMNEKGLVP 523
                                                   G   +A  ++ EM  KG +P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + ++YS  IG LC   K  +A  L  +M + G+ P V  Y  L
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 227/459 (49%), Gaps = 3/459 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVY 176
           +++  QA+  F+Q+     +P +  +NS++I ++    ++K    ++E   +     D  
Sbjct: 139 AKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTV 198

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C+ G  + A ++LN+++E+G  P   IYT LI    K  D   A  LF ++
Sbjct: 199 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 258

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                     TYT LI GL K G   + + F+ +MQ  G  P     N +I+     G++
Sbjct: 259 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 318

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
            +  KLF EM       +VVTYNT+I  L + + R  E     ++MK +GISP+  TY+ 
Sbjct: 319 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 378

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGFC     +KA  L  ++   G  P    Y  LI A  KA    +A +L +E++E  
Sbjct: 379 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 438

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            + S   Y ++I    ++  ++ A  M+  M K G +PDVY Y  L+ GL   G + EA 
Sbjct: 439 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 498

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                M E    P+   YN+++ G  K G  +RA+ +L  M +  + P++ SY++ +G L
Sbjct: 499 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 558

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 559 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 597



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 192/401 (47%), Gaps = 2/401 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I A  K    D A+   ++M + G++P +  +  L+    K          F E R
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +    DV+++  LI+G  +AG +++A+    +++  G  P+ V   ++I+   K G ++
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF-EFYEKMQLNGVSPSLYTYNCL 286
            A  LF+++  L  + +  TY  +I  LF++  +      ++E+M+ +G+SPS +TY+ L
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 379

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C   ++ +   L +EM  +        Y +LI  L K  R   A  L  ++K    
Sbjct: 380 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 439

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           S +   Y  +I     AG  D A  +F+++   G +P V  YN L+   ++ G    A  
Sbjct: 440 SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 499

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +R M+E G  P   +Y I+++   ++    +A EM S M++S   PDV +Y  ++  L 
Sbjct: 500 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALS 559

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  +EASKL   M     E + + Y+ ++    K  + Y
Sbjct: 560 HAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEY 600



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 160/371 (43%), Gaps = 39/371 (10%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
            P TK  +Y  +I    K   +  AL  F +M     RP   T+  L+  + K+   D+ 
Sbjct: 229 QPTTK--IYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 286

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE----------------- 202
           + FF E  R     D      +I    +AG L+ A ++  ++E                 
Sbjct: 287 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 346

Query: 203 -------------------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                              E G SP+   Y+ LIDG CK   +E+A ML  ++ E G   
Sbjct: 347 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 406

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y  LI  L K        E +++++ N  S S   Y  +I      G++ +   +F
Sbjct: 407 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMF 466

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           DEM     A +V  YN L+ GL +   + EA   + +M+  G  P++ +YN +++G    
Sbjct: 467 DEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 526

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +A  + + +K +   P VV+YN ++ A S AG  + AS L++EM   G     +TY
Sbjct: 527 GGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 586

Query: 424 TILIDSFVRSD 434
           + ++++  + D
Sbjct: 587 SSILEAIGKVD 597


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 269/597 (45%), Gaps = 46/597 (7%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           R  +  PL+ +++ +                 LR+L S ++    A +  +  +I+    
Sbjct: 41  RGHRPAPLRVYAISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLG 100

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS--- 135
           T+ +F    L+  L +      + V ++ +  S ++++ + R  D A+      LD+   
Sbjct: 101 TAGAF---DLMEGLVREMRREGHQV-RAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTF 156

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           GV+  +  FN LL  +++          ++E   + ++ DV +   LIK  C A  +  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +L ++   G +P+   +T+L+ G  + G IE A  +  K+ E G   T  T  VLI G
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K G  +D   + ++   +G  P   TYN  +H  C  G VS   K+ D M       +
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           V TYNT+I  L K   + EA+ +++QM   G  P+  T+N LI         ++A  L  
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL-------- 426
           +L   G SP V T+N+LI A  K G+  +   L  EM+  G TP EVTY IL        
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456

Query: 427 ---------------------------IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
                                      ID+  +   +E+A E++  M   G S    T+ 
Sbjct: 457 KLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFN 516

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI GLC    + +A++L   M +  L+PN++ YN ++  YCK+GN  +A  +L  M   
Sbjct: 517 TLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTAN 576

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA---KNNI 573
           G   ++ +Y + I  LC+ G+   A  LL  M   G++P+   YN + ++   +NN+
Sbjct: 577 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 265/566 (46%), Gaps = 53/566 (9%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMSSH 61
           LN++   +KL  L+  S++N  + +G+Q    +++ +++            L+L +MSSH
Sbjct: 169 LNVLVEGSKLKLLE--SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH 226

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRL 121
             A  +T    ++ G I   S    + L    ++  +  +P   +     +I+ + K   
Sbjct: 227 GVAPDETTFTTLMQGFIEEGSI--EAALRVKAKMMEAGCSPTGVT--VNVLINGYCKMGR 282

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
            + AL Y  Q +  G  P   T+N+                                   
Sbjct: 283 VEDALGYIQQEIADGFEPDQVTYNTF---------------------------------- 308

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G C+ G ++ A +V++ + + G  P+V  Y ++I+   KNG+++ AK +  ++ + G 
Sbjct: 309 VHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+  LI  L      ++  +   ++ + G+SP +YT+N LI+  C  G    G +
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF+EM+      + VTYN LI  LC   ++  A  LL++M+  G   + +TYN +ID  C
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                ++A  +F+Q+ + G S S VT+N LI    KA     A++L+ +M + G+ P+ +
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  ++  + +  +++KA ++   M  +GF  DV TYG LI+GLC  G  + A KL   M
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-DGK 540
               + P    YN +I    +  N   AL L  EM E G  P+  +Y      LC+  G 
Sbjct: 609 RIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGP 668

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EA   L +M+  G  P  S + +L
Sbjct: 669 IKEAFDFLVEMVNKGFMPEFSSFRML 694



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 201/415 (48%), Gaps = 10/415 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+   D+A    +QM+D G  P + TFN+L++ +      ++      E  
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  DVY+F ILI   C+ GD +    +  +++  G +P+ V Y  LID  C  G + 
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++   G   +  TY  +I  L K    ++  E +++M   G+S S  T+N LI
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C   ++ +  +L ++M    +  N +TYN+++   CK+  +++A  +L+ M   G  
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C AG T  A +L   ++  G  P+   YN +I++  +  N + A +L
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNL 639

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD-DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            REM E G  P  +TY I+  S  R    +++AF+    M   GF P+  ++ +L  GL 
Sbjct: 640 FREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699

Query: 467 ---MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              M   +  A +L   + + K   +D      I GY K    Y AL   G + E
Sbjct: 700 NLGMDDYLISAIELI--IEKAKFRESDA---SAIRGYLKIRKYYDALATFGRLLE 749


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 214/418 (51%), Gaps = 2/418 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P    +N+++     +   D      +E    VE D Y++  LI+G C  G    A  VL
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM--PVEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           +++      P+VV YT L++  CK    ++A  L  ++ + G      TY V++ G+ + 
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G   D  EF + +   G  P+  +YN ++   C   +  +  +L  EM  +    NVVT+
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI  LC++  V+ A  +L+Q+   G +PN ++YN L+  FC   + DKA    + + S
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P +V+YN L+ A  ++G   +A +L+ +++++G  P  ++Y  +ID   ++   ++
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+ + M   G  PD+ TY  +  GLC +  +++A + F  + +  + PN V+YN +I 
Sbjct: 422 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 481

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           G CK   ++ A+ L   M   G +PN ++Y+  I  L  +G   EA  LL+++   G+
Sbjct: 482 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 8/393 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +   LIK    +G   +A  VL         P+V+ Y +++ G C  G ++ A+   
Sbjct: 95  DAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMVAGYCGAGQLDAAR--- 146

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + E+ +    +TY  LI GL   G   +     ++M      P + TY  L+   C  
Sbjct: 147 RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 206

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  KL DEMR +    ++VTYN ++ G+C+E RV +A   L  +   G  PN ++Y
Sbjct: 207 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 266

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++ G C A   + A  L  ++   G  P+VVT+N+LI    + G  + A +++ ++ +
Sbjct: 267 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 326

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G TP+ ++Y  L+ +F +   M+KA     LM   G  PD+ +Y  L+  LC  G +  
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L + + +    P  + YN +I G  K G +  AL LL EM  KGL P+I +YS+   
Sbjct: 387 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC++ +  +A     ++  +G++P+  LYN +
Sbjct: 447 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 193/393 (49%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  ++ G C AG L+ A  ++    EM   P+   Y +LI G C  G    A  + 
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLV---AEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++     V    TYT+L+    K    K   +  ++M+  G +P + TYN +++  C E
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V +  +    +       N V+YN ++ GLC   R ++AE L+ +M   G  PNV+T+
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  + A  +  Q+   G +P+ ++YN L+ AF K      A   +  M  
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  P  V+Y  L+ +  RS +++ A E+   ++  G +P + +Y  +I GL   G  KE
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L N M    L+P+ + Y+ +  G C+E     A+R  G++ + G+ PN   Y++ I 
Sbjct: 422 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 481

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +   A  L   M+  G  P+ S Y IL
Sbjct: 482 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 192/387 (49%), Gaps = 1/387 (0%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAF 195
           V P + T+N+L+  +              E  R +   DV ++ IL++  C+     +A 
Sbjct: 154 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 213

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           ++L+++ + G +P++V Y  +++G C+ G ++ A    + +   G      +Y +++ GL
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 273

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
                 +D  E   +M   G  P++ T+N LI   C +G V    ++ +++       N 
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           ++YN L+   CK+ ++ +A   LD M   G  P++++YN L+   C +GE D A  L +Q
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           LK  G +P +++YN +I   +KAG +K A +L+ EM  +G+ P  +TY+ +     R D 
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +E A   +  +Q  G  P+   Y  +I GLC +     A  LF  M      PN+  Y +
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +I G   EG    A  LL E+  +G+V
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 172/376 (45%), Gaps = 37/376 (9%)

Query: 227 ERAKMLFRKIGELG----LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +R + L R+ GEL     LV +        C      L   G     +  L    P +  
Sbjct: 70  DRLRSLVRR-GELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMA 128

Query: 283 YNCLIHEYCNEGKVSEGFKL--------------------------------FDEMRHRE 310
           YN ++  YC  G++    +L                                 DEM  R 
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 188

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +VVTY  L+   CK    ++A +LLD+M+  G +P+++TYN +++G C  G  D A 
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 248

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                L S G  P+ V+YN++++    A   + A +L+ EM ++G  P+ VT+ +LI   
Sbjct: 249 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 308

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R   +E A E+   + K G +P+  +Y  L+H  C +  M +A    + M      P+ 
Sbjct: 309 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 368

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN ++   C+ G    A+ LL ++ +KG  P + SY++ I  L + GK  EA  LLN+
Sbjct: 369 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 428

Query: 551 MLKLGLKPSVSLYNIL 566
           M+  GL+P +  Y+ +
Sbjct: 429 MVSKGLQPDIITYSTI 444



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 197/430 (45%), Gaps = 41/430 (9%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R L+++M     A     +++ + GR  +++      L  L ++      P   +  Y  
Sbjct: 146 RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANA-----LAVLDEMLRRRCVPDVVT--YTI 198

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +++A  K     QA+    +M D G  P                                
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTP-------------------------------- 226

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D+ ++ +++ G C+ G ++ A E L  L   G  PN V Y  ++ G C     E A+ 
Sbjct: 227 --DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEE 284

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++G+ G      T+ +LI  L + GL +   E  E++   G +P+  +YN L+H +C
Sbjct: 285 LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 344

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            + K+ +     D M  R    ++V+YNTL+  LC+   V  A  LL Q+K  G +P +I
Sbjct: 345 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 404

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +IDG   AG+T +A  L N++ S G  P ++TY+ +     +    + A     ++
Sbjct: 405 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 464

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           ++ GI P+ V Y  +I    +  +   A ++++ M  +G  P+  TY +LI GL  +G +
Sbjct: 465 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 524

Query: 472 KEASKLFNSM 481
           KEA  L + +
Sbjct: 525 KEARDLLDEL 534



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 148/308 (48%), Gaps = 14/308 (4%)

Query: 266 EFYEKMQLNGVS--PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTL 321
           E  E ++L G +  P   T   LI +    G+ +E  ++         AC  +V+ YN +
Sbjct: 80  ELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-------AACGPDVMAYNAM 132

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           + G C   ++  A RL+ +M    + P+  TYN LI G C  G T  A  + +++     
Sbjct: 133 VAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 189

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P VVTY +L+ A  K    K A  L+ EM ++G TP  VTY ++++   +   ++ A E
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 249

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               +   G  P+  +Y +++ GLC     ++A +L   M +    PN V +NM+I   C
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 309

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           ++G    AL +L ++ + G  PN  SY+  +   C+  K  +A   L+ M+  G  P + 
Sbjct: 310 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 369

Query: 562 LYNILYRA 569
            YN L  A
Sbjct: 370 SYNTLLTA 377



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 5/229 (2%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYS 177
           L + AL    Q+   G  P S ++N LL    K    DK   F        C    D+ S
Sbjct: 313 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP--DIVS 370

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +  L+   C +G+++ A E+L+QL++ G +P ++ Y ++IDG  K G  + A  L  ++ 
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             GL     TY+ +  GL +    +D    + K+Q  G+ P+   YN +I   C   +  
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
               LF  M       N  TY  LI GL  E  ++EA  LLD++   G+
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ A  K +  D+A+ +   M+  G  P   ++N+LL  + +S   D       + +
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 169 CKVELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    V  S+  +I G  +AG   +A E+LN++   G  P+++ Y+++  G C+   IE
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F K+ ++G+      Y  +I GL K        + +  M  NG  P+  TY  LI
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 288 HEYCNEGKVSEGFKLFDEMRHREV 311
                EG + E   L DE+  R V
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGV 539


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 254/542 (46%), Gaps = 14/542 (2%)

Query: 28  AFSLFNWAS-RQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRITSSSFTP 85
           A   FN+    + + HT  S +I++  L+ +K+   +++   TL+L+    +     F  
Sbjct: 79  ALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLE 138

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
               C  +               ++ ++ ++L++     A+     ML + + P   T +
Sbjct: 139 SHKQCKFSSTLG-----------FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLS 187

Query: 146 SLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           ++L  +++   F   W  F E+    V+ D Y+   +I+  CE  D  +A E +  +E  
Sbjct: 188 AILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESN 247

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
            F  ++V Y  LI G CK G +  A  + + + E GL     TY  L+ G  +     DG
Sbjct: 248 RFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDG 307

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                +M   G  P+    + L+     +G +   + L  ++       N+  YN LI  
Sbjct: 308 ICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINA 367

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK   + +AE L   M    +  N +TY+ LID FC  G  D A   F ++  +G   +
Sbjct: 368 LCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRET 427

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +  YN LI    K G+   A  L  +M   G+ P+  T+T LI  + +   +EKAF++Y 
Sbjct: 428 IYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M +   +P VYT+  LI+GLC    M EASKLF+ M E K++P +V YN+MI GYCK  
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH 547

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           N  +A  LL +M   GLVP+  +Y   I  LC  G+   A+  ++ + K  LK +   Y+
Sbjct: 548 NMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYS 607

Query: 565 IL 566
            L
Sbjct: 608 AL 609



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 210/435 (48%), Gaps = 2/435 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P    +N+L+  + K    DK  L +   +   + L+  ++ ILI   C+ G L+ A
Sbjct: 353 GFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
                ++ E G    +  Y SLI+G CK GD+  A+ L+ K+   GL  T  T+T LI G
Sbjct: 413 ESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISG 472

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K+   +  F+ Y +M    ++PS+YT+  LI+  C+  +++E  KLFDEM  R++   
Sbjct: 473 YCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPT 532

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            VTYN +I G CK   + +A  LL+ M   G+ P+  TY  LI G C  G    A    +
Sbjct: 533 EVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            L       + + Y+ L+  +   G    A     EM +RGI    V + +LID  ++  
Sbjct: 593 DLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQ 652

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           DM++ F +   M   G  PD   Y  +I     +G+ K++ +  + M   K  PN V Y 
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
             + G CK G   RA  L  +M    + PN  +Y   +  L ++G   EA  L ++MLK 
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK- 771

Query: 555 GLKPSVSLYNILYRA 569
           GL  + + YNIL R 
Sbjct: 772 GLLANTATYNILIRG 786



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 212/442 (47%), Gaps = 1/442 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D  +   ++M++ G  P     + L+  + K  + D  + L     R     +++ +  L
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNAL 364

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+  DL+KA  +   +  M    N V Y+ LID  CK G ++ A+  F ++ E G+
Sbjct: 365 INALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGI 424

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             T + Y  LI G  K G        Y KM   G+ P+  T+  LI  YC + +V + FK
Sbjct: 425 RETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFK 484

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L+ EM  +E+A +V T+  LI GLC    + EA +L D+M    I P  +TYN +I+G+C
Sbjct: 485 LYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYC 544

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A   DKAF L   +  NG  P   TY  LI      G    A D + ++ ++ +  +E+
Sbjct: 545 KAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEM 604

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y+ L+  +     + +A      M + G + D+  + VLI G   + +MK    L   M
Sbjct: 605 CYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKM 664

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
           ++  L P+ V+Y  MI  Y KEG+  ++   L  M  +   PN+ +Y++ +  LC+ G+ 
Sbjct: 665 YDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEI 724

Query: 542 PEAEVLLNQMLKLGLKPSVSLY 563
             A  L  +ML   + P+   Y
Sbjct: 725 DRAGHLFEKMLTANISPNSVTY 746



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 238/504 (47%), Gaps = 46/504 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S+I+ H K      A F + +M++ G+ P + TF +L+    K    +K +  + E N
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             ++   VY+F  LI G C   ++ +A ++ +++ E    P  V Y  +I+G CK  +++
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L   +   GLV   +TY  LI GL   G      +F + +    +  +   Y+ L+
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H YC +G+++E      EM  R +  ++V +  LI G  K+  ++    LL +M   G+ 
Sbjct: 611 HGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLR 670

Query: 348 P-----------------------------------NVITYNKLIDGFCDAGETDKAFRL 372
           P                                   NV+TY   ++G C  GE D+A  L
Sbjct: 671 PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHL 730

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F ++ +   SP+ VTY   + + +K GN K A+DL  EM  +G+  +  TY ILI  F +
Sbjct: 731 FEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCK 789

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + +A ++ S M ++G  PD  TY  +I+  C  G++  A +L+++M    +EP+ V 
Sbjct: 790 LGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVA 849

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN--IASYSSTIGVL-------CQDGKWPE 543
           +N++I+G C  G   +A  L  +M  +GL P   +      +GV        C  G+   
Sbjct: 850 FNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDT 909

Query: 544 AEVLLNQMLKLGLKPSVSLYNILY 567
           A  L + ML   +K S+ ++  LY
Sbjct: 910 ALRLYHSMLTRAVKLSLEMWKCLY 933



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 1/235 (0%)

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           E+ L+  K    S + + ++ L+  +        A  +   +  N   P V T + ++  
Sbjct: 134 EKFLESHKQCKFS-STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNG 192

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             +     +  ++  E    G+ P   T + +I S     D  +A E    M+ + F   
Sbjct: 193 LLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLS 252

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + TY VLIHGLC  G + EA ++  S+ E  L+ + V Y  ++ G+C+       + L+ 
Sbjct: 253 IVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMN 312

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM E G VP  A+ S  +  L + G    A  L+ ++ + G  P++ +YN L  A
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINA 367


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 210/428 (49%), Gaps = 35/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  +I G  + GDL+K +   N++ +   SPNVV Y S+I   CK   +++A  + 
Sbjct: 87  DVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL 146

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G++    TY  ++ G   +G  K+   F +KM+ +GV P + TYN L+   C  
Sbjct: 147 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 206

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTL-------------------------------- 321
           G+ +E  K+FD M  R +   + TY TL                                
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 322 ---ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
              +C   K+ +V+EA  +  +M+  G++PN +TY  +I   C +G  + A   F Q+  
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G SP  + YN LI         + A +L+ EM +RGI  + + +  +IDS  +   + +
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           + +++ LM + G  PD+ TY  LI G C+ G M EA+KL  SM    ++P+ V Y+ +I 
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK      AL L  EM   G+ P+I +Y+  +  L Q  +   A+ L   + K G + 
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 559 SVSLYNIL 566
            +S YNI+
Sbjct: 507 ELSTYNII 514



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 231/462 (50%), Gaps = 3/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSE 166
           Y SI+     S    +A+ +  +M   GV P   T+NSL+ ++ K+  C+ +   +F S 
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT-EARKIFDSM 219

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  ++ ++ ++G L++G    G L +   +L+ +   G  PN  +++ L+    K   +
Sbjct: 220 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 279

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M   G+SP    YN L
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH  C   K     +L  EM  R +  N + +N++I   CKE RV E+E+L D M   G+
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ITY+ LIDG+C AG+ D+A +L   + S G  P  VTY+ LI  + K    K A  
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALV 459

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L REME  G++P  +TY I++    ++     A E+Y  + KSG   ++ TY +++HGLC
Sbjct: 460 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                 +A ++F ++    L+     +N+MI    K G +  A  L    +  GLVPN  
Sbjct: 520 KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 579

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           +Y      +   G   E + L   M   G      + N + R
Sbjct: 580 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 621



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I+   K    D+    +++MLD  + P   T+NS++  + K+ + DK   +  +  
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  D  ++  ++ G C +G   +A   L ++   G  P+VV Y SL+D  CKNG   
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY  L+ G    G   +     + M  NG+ P+ Y ++ L+
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  + KV E   +F +MR + +  N VTY  +I  LCK  RV++A    +QM   G+S
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P  I YN LI G C   + ++A  L  ++   G   + + +N +I +  K G    +  L
Sbjct: 331 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 390

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M   G+ P  +TY+ LID +  +  M++A ++ + M   G  PD  TY  LI+G C 
Sbjct: 391 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCK 450

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              MK+A  LF  M  + + P+ + YN+++ G  +   +  A  L   + + G    +++
Sbjct: 451 ISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELST 510

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  LC++    +A  +   +  + LK     +NI+  A
Sbjct: 511 YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 552



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 3/307 (0%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYN 319
           +D    ++++   G+ P +++YN L++  C+E +  E  +L   M      C  +VV+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           T+I G  KE  + +     ++M    ISPNV+TYN +I   C A   DKA  +   +  +
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P  +TYN ++  F  +G  K A   +++M   G+ P  VTY  L+D   ++    +A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +++  M K G  P++ TYG L+ G   KG + E   L + M    + PN  V+++++  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           Y K+     A+ +  +M ++GL PN  +Y + IG+LC+ G+  +A +   QM+  GL P 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 560 VSLYNIL 566
             +YN L
Sbjct: 333 NIVYNSL 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 173/380 (45%), Gaps = 2/380 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    KS   + A+ YF QM+D G+ P +  +NSL+  +     +++      E  
Sbjct: 301 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 360

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++LIDG C  G ++
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 420

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +G+     TY+ LI G  K    KD    + +M+ +GVSP + TYN ++
Sbjct: 421 EATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  + +   +L+  +        + TYN ++ GLCK     +A R+   + +  + 
Sbjct: 481 QGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 540

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +ID     G  D+A  LF    SNG  P+  TY ++       G  +    L
Sbjct: 541 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 600

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ME+ G T        ++   ++  ++ +A    S++ +  FS +  T  + I  L  
Sbjct: 601 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 659

Query: 468 KGNMKEASKLFNSMWETKLE 487
            G  +E  +     +++ +E
Sbjct: 660 GGKYQEYHRFLPEKYKSFIE 679



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG--LVPNIASYS 529
           ++A  +F+ +    + P+   YN+++ G C E  S  AL LL  M + G    P++ SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + I    ++G   +     N+ML   + P+V  YN +  A
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAA 132


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 227/482 (47%), Gaps = 36/482 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D AL  FH+ML     P    F  LL  + K   +     L    +   +  DVY+  I+
Sbjct: 38  DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIV 97

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ A  VL ++ ++G  P+   +T+L+ G C  G I  A  +F K+   G 
Sbjct: 98  INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY  L+ GL K+    +    + +M   G+SP ++TYN LIH  CN  +      
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L +EM   ++  NVV+ N ++  LCKE +V EA  ++D M   G+ P+V+TY  L+DG C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK------------------------ 397
              E D+A ++F+ +  NG   +VV+YN LI  + K                        
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 398 -----------AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
                       G  + A  L  EM   G  P+ VTY+IL+D   ++  + +A  +   +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           + S   PDV  Y + I G+C  G+++ A  LF+++    L+P+   +N+MI G CK G  
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A +L  EM+E G + N  +Y++    L Q+ K   A  LL +ML  G    VS   +L
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALL 517

Query: 567 YR 568
            +
Sbjct: 518 VK 519



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 197/401 (49%), Gaps = 35/401 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  L++G C  G + +A +V +++   GF PNVV Y +L++G CK+  +  A  LF
Sbjct: 125 DTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLF 184

Query: 234 RKIGELGLVATQHTYTVLI------C-----------------------------GLFKN 258
            ++   G+     TY  LI      C                              L K 
Sbjct: 185 SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G   +  +  + M   GV P + TY  L+  +C   ++ E  K+FD M      CNVV+Y
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI G CK  R+ +A  L ++M    + PN +TY+ LI G C  G    A  LFN++ +
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            GQ P++VTY++L+    K      A  L++ +E   + P    Y I ID   R+ D+E 
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A +++S +   G  PDV+T+ ++I GLC +G + EASKLF  M E     N   YN +  
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQ 484

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           G  +   + RA++LL EM  +G   ++++ +  + +L  DG
Sbjct: 485 GLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 37/369 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++++   K R   +AL  F +M+  G+ P   T+NSL+  +   C +       +E  
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP------------------- 208
           + K+  +V S  I++   C+ G + +A +V++ + + G  P                   
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 209 ----------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                           NVV Y +LI+G CK   I++A  LF ++    L+    TY+ LI
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL   G  +D    + +M   G  P+L TY+ L+   C   +++E   L   +    + 
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V  YN  I G+C+   ++ A  L   +   G+ P+V T+N +I G C  G  D+A +L
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F ++  NG   +  TYN + +   +   +  A  L+ EM  RG + ++V+ T L+   + 
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS-ADVSTTALLVKMLS 522

Query: 433 SDDMEKAFE 441
            D ++++ +
Sbjct: 523 DDGLDQSVK 531



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 125/279 (44%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + +    F  M H      +  +  L+  + K         L  +M   GI P+V T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I+ FC     D A  +  ++   G  P   T+  L+R     G    A D+  +M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ VTY  L++   +   + +A  ++S M   G SPD++TY  LIH LC     K  +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L N M ++K+ PN V  N+++   CKEG    A  ++  M + G+ P++ +Y++ +   
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           C   +  EA  + + M++ G   +V  YN L      I+
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQ 315


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 241/541 (44%), Gaps = 73/541 (13%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S  N V     + ++ID + K+   D A+    +M    V P   TFNSLL  + K+   
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI 187

Query: 158 DKGWLFFSENRCK-------------------------------------VELDVYSFGI 180
           ++     +E +C                                      V++D Y+  I
Sbjct: 188 EEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSI 247

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+ G C+ G + KA EVL  L E G  P  VIY ++++G C+ GD++RA +   ++   G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L      +  +I    +  +     E+ +KM   G++PS+ TYN LI  Y      S  F
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++ +EM       NV++Y +LI  LCK+ ++ EAE +L  M   G+ PN   YN LIDG 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+  +A R F+++  NG   ++VTYN LI+   K G  K A ++   +   G  P  
Sbjct: 428 CTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV 487

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  LI  +  + + +K  E+Y  M+K G  P + T+  LI G C K  +K    LFN 
Sbjct: 488 ITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNE 546

Query: 481 MWETKLEPNDVVYNMMI-----------------------------------FGYCKEGN 505
           M +  L P+ VVYN MI                                    G+ KEG 
Sbjct: 547 MLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGK 606

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
                 L+ +M  KGL+P   +YS  I   C    +  A V   +ML+ G  P+V + N 
Sbjct: 607 LSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666

Query: 566 L 566
           L
Sbjct: 667 L 667



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 233/463 (50%), Gaps = 2/463 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           I+++ ++S+  D  L  F +M+  G RP    +   ++  +K         LF +  R K
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  +V+ + +LI G C+   +  A ++  ++      PN V + +LIDG CK G+++ A 
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ +  +  +  T+  L+ GL K    ++      +++ NG  P  +TY+ +    
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216

Query: 291 C-NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
             ++        L+ E   + V  +  T + L+ GLCKE +V++AE +L  +   G+ P 
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            + YN +++G+C  G+ D+A     Q++S G  P+ + +N +I  F +      A + V+
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M  +GI PS  TY ILID + R     + F++   M+++G  P+V +YG LI+ LC  G
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA  +   M    + PN  +YNM+I G C  G    ALR   EM++ G+   I +Y+
Sbjct: 397 KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYN 456

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           S I  LC+ GK  EAE +   +   G  P V  YN L    +N
Sbjct: 457 SLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSN 499



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 229/461 (49%), Gaps = 3/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSE 166
           +Y  +I    K +    A   F +M    + P   TFN+L+    K+   D    L    
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            + KVE  + +F  L+ G C+A  + +A  +LN+++  GF P+   Y+ + DG  K+ D 
Sbjct: 163 KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDG 222

Query: 227 ERAKM-LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             A + L+R+    G+    +T ++L+ GL K G  +   E  + +  +G+ P    YN 
Sbjct: 223 AGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNT 282

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +++ YC  G +       ++M  R +  N + +N++I   C+   + +AE  + +M   G
Sbjct: 283 IVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG 342

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I+P+V TYN LIDG+       + F++  +++ NG+ P+V++Y  LI    K G    A 
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAE 402

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            ++R+M  RG+ P+   Y +LID       + +A   +  M K+G    + TY  LI GL
Sbjct: 403 MVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G +KEA ++F  +  T   P+ + YN +I GY   GNS + L L   M + GL P I
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTI 522

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++   I    ++G     E L N+ML++ L P   +YN +
Sbjct: 523 NTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAM 562



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 213/450 (47%), Gaps = 37/450 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +I++ + +    D+A+    QM   G+RP    FNS++    +    DK   +  + 
Sbjct: 279 IYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +   V ++ ILI G       ++ F++L ++EE G  PNV+ Y SLI+  CK+G I
Sbjct: 339 VGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKI 398

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+M+ R                                    M   GV P+   YN L
Sbjct: 399 LEAEMVLRD-----------------------------------MVGRGVLPNANIYNML 423

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  GK+ E  + FDEM    +   +VTYN+LI GLCK  +++EAE +   +   G 
Sbjct: 424 IDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGH 483

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+VITYN LI G+ +AG + K   L+  +K  G  P++ T++ LI   SK G  K+   
Sbjct: 484 CPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKET 542

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  EM +  ++P  V Y  +I  +  +  ++KAF +   M   G  PD  TY  LI G  
Sbjct: 543 LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G + E   L + M    L P    Y+++I G+C   +   A     EM E G +PN+ 
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             +     L +DG+  EA+ + ++M+  G+
Sbjct: 663 ICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 199/423 (47%), Gaps = 36/423 (8%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+  C E+   ++  E+ + + + G  P+      +++   ++   +    LF+++  L
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G    +  Y   +    K G  K   E +E M+   V P+++ YN LI   C E ++ + 
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KLF EM  R +  N VT+NTLI G CK   V  A  L ++MK   + P++IT+N L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTY------------------------------- 388
            C A   ++A  + N++K NG  P   TY                               
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 389 -----NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
                ++L+    K G  + A ++++ + E G+ P EV Y  +++ + +  DM++A    
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M+  G  P+   +  +I   C    + +A +    M    + P+   YN++I GY + 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               R  ++L EM E G  PN+ SY S I  LC+DGK  EAE++L  M+  G+ P+ ++Y
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 564 NIL 566
           N+L
Sbjct: 421 NML 423



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 221/493 (44%), Gaps = 15/493 (3%)

Query: 1   MAQSKQGEGQALTL--NLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKM 58
           + +S  G G AL L    I +  K+       L N   ++G     + +       L  +
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEV-------LKSL 268

Query: 59  SSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
             H     + +   I++G         R++L  + Q+      P   +  + S+ID   +
Sbjct: 269 VEHGLVPGEVIYNTIVNGYCQIGDMD-RAIL-TIEQMESRGLRPNCIA--FNSVIDKFCE 324

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYS 177
            ++ D+A  +  +M+  G+ P   T+N L+    + C F + +    E     E  +V S
Sbjct: 325 MQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVIS 384

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G LI   C+ G + +A  VL  +   G  PN  IY  LIDG C  G +  A   F ++ 
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMS 444

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G+ AT  TY  LI GL K G  K+  E +  +   G  P + TYN LI  Y N G   
Sbjct: 445 KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQ 504

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           +  +L++ M+   +   + T++ LI G  KE  ++  E L ++M    +SP+ + YN +I
Sbjct: 505 KCLELYETMKKLGLKPTINTFHPLISGCSKE-GIKLKETLFNEMLQMNLSPDRVVYNAMI 563

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
             + + G   KAF L  ++   G  P   TYN LI    K G      DLV +M+ +G+ 
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLI 623

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P   TY++LI       D   A+  Y  M ++GF P+V     L  GL   G ++EA  +
Sbjct: 624 PEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSI 683

Query: 478 FNSMWETKLEPND 490
            + M    ++  D
Sbjct: 684 CSEMIANGMDNLD 696


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 227/498 (45%), Gaps = 37/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           + ++IDA+ K    D+A   F  M  +GV P    ++ L+  + K+   + G  L     
Sbjct: 310 FSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVAL 369

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++LDV  F   +    + GDL +  ++  ++   G SPNVV  + LI G C+NG I 
Sbjct: 370 DKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRIL 429

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF +I +LG   +  TY+ LI G  K+G  +DGF  YE M      P    Y+ LI
Sbjct: 430 EACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLI 489

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM------------------ 329
           +  C +G V +  + F +  +R ++ NV T NTL+   C+                    
Sbjct: 490 NGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIK 549

Query: 330 -----------------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                            RV EA  L  QM      P+VITY  LIDG C   ++     +
Sbjct: 550 ADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCI 609

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ +  N  +P +  YNVLI   S+ G+ + A  L   + ERG  P   T+  +I  +  
Sbjct: 610 FDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCN 669

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ A ++++ M      P+  T+ +LI   C +G M +A  +F+ M E   EPN V 
Sbjct: 670 FKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVT 729

Query: 493 YNMMIFGYCKEGNSYRA-LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           Y+ +I GY K  +   + L+L  EM E  + PNI SYS  I  LC+ G   EA       
Sbjct: 730 YSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCA 789

Query: 552 LKLGLKPSVSLYNILYRA 569
           L   L P V  Y IL R 
Sbjct: 790 LDKHLLPDVIAYTILIRG 807



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 197/400 (49%), Gaps = 6/400 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGC 185
           F Q+L  G  P   T+++L+    KS +   G+  + +    RC+ +  VYS  +LI G 
Sbjct: 435 FVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYS--VLINGL 492

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G +  A     Q    G SPNV    +L+D  C+   I  A  ++  +G L + A  
Sbjct: 493 CKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADT 552

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TYT+LI G  + G   +    + +M      P + TY  LI   C   K S G  +FD 
Sbjct: 553 VTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDF 612

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    VA ++  YN LI    +E  ++ A  L   +   G  P+V T+N +I  +C+   
Sbjct: 613 MCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKR 672

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A +LF ++ S    P+ +T+ +LI AF + G    A  +  +M E G  P+ VTY+ 
Sbjct: 673 LDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSC 732

Query: 426 LIDSFVRSDDM-EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           LI  + +S  M E   ++Y+ M ++  +P++ +Y +LI GLC +G MKEAS  F    + 
Sbjct: 733 LIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDK 792

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            L P+ + Y ++I GYCK G    A+ L   M    L P+
Sbjct: 793 HLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 203/432 (46%), Gaps = 35/432 (8%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD+ +   ++KG     D+  A +  N +  +G  PNVV +++LID  CK G++++A +L
Sbjct: 270 LDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVL 329

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDG---------------------------- 264
           F  +   G+      Y++LI GLFK G  +DG                            
Sbjct: 330 FDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVK 389

Query: 265 -------FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
                   + Y++M   G+SP++ + + LI  +C  G++ E   LF ++       +++T
Sbjct: 390 IGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILT 449

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y+ LI G CK   +++   L + M      P+ I Y+ LI+G C  G    A R F Q  
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAV 509

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           + G SP+V T N L+ +F +      A  +   M    I    VTYTILI    +   ++
Sbjct: 510 NRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVD 569

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A  ++  M K  F PDV TY  LI GLC          +F+ M +  + P+  +YN++I
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLI 629

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             + +EG+   AL L   + E+G  P++ ++++ I   C   +  +A  L  +M    L+
Sbjct: 630 NMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLR 689

Query: 558 PSVSLYNILYRA 569
           P+   + IL  A
Sbjct: 690 PNAITFTILIDA 701



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 174/356 (48%)

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V+Y  LI+  C+ G  +++  +F  +   G+  + +   +L+  L  +   +   + Y +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           +           Y  +++ + N+G+V  G +    +       +++T N ++ G+  +  
Sbjct: 228 LCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQND 287

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A+   + +   G  PNV+T++ LID +C  G  DKAF LF+ +  NG +P ++ Y++
Sbjct: 288 IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSI 347

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    KAG  +    L+    ++GI    V ++  +D++V+  D+ +  ++Y  M   G
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG 407

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            SP+V +  +LI G C  G + EA  LF  + +   EP+ + Y+ +I G+CK GN     
Sbjct: 408 ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGF 467

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L  +M +K   P+   YS  I  LC+ G   +A     Q +  GL P+V   N L
Sbjct: 468 YLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTL 523



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 239/548 (43%), Gaps = 19/548 (3%)

Query: 25  PLKAFSLFNWASRQGLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           P  A   F WA    +     P   +++  LL +++ S +       I++  +   T  +
Sbjct: 94  PFSAIRFFEWAESFFISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDA 153

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           F  R   C L      S+N    S +Y  +I+++ +  + D+++  F  +   G+    N
Sbjct: 154 F--RDGFCDL-----DSTN---HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPN 203

Query: 143 TFNSLLIFVIKS----CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
               LL  +I S       DK     S  R +    VY F  ++      G++       
Sbjct: 204 VVYLLLGSLIDSHCVEVIVDKYGELCSAMR-EQPFSVYEF--VMNRFMNKGEVEMGLRFH 260

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             L + GF  +++    ++ G     DI  A   F  +  +G      T++ LI    K 
Sbjct: 261 KALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKE 320

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G     F  ++ M  NGV+P L  Y+ LI      G++ +G +L      + +  +VV +
Sbjct: 321 GNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGF 380

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           ++ +    K   +    ++  +M   GISPNV++ + LI GFC  G   +A  LF Q+  
Sbjct: 381 SSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  PS++TY+ LI  F K+GN +    L  +M ++   P  + Y++LI+   +   +  
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A   +      G SP+V+T   L+   C    +  A K++  M    ++ + V Y ++I 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G  + G    AL L  +M +K   P++ +Y + I  LC+  K      + + M K  + P
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620

Query: 559 SVSLYNIL 566
            +++YN+L
Sbjct: 621 DIAIYNVL 628



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 2/175 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I  +   +  D A+  F +M    +RP + TF  L+    +    D   L FS+  
Sbjct: 660 FNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKML 719

Query: 169 CK-VELDVYSFGILIKGCCEAGDL-NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  E ++ ++  LI G  ++  +     ++ N++ E   +PN+V Y+ LIDG CK G +
Sbjct: 720 EEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLM 779

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + A   FR   +  L+     YT+LI G  K G   +    Y+ M LN ++P  +
Sbjct: 780 KEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRF 834


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 231/468 (49%), Gaps = 11/468 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y +++D  LK+   D+A+    QM++ G  P   T+  ++  + K+   ++    F +  
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE----MGFSPNVVIYTSLIDGCC 221
            N C+   D + +  LI G  + G L++A   LNQ+ E     G  P+VVI+  +I   C
Sbjct: 174 GNGCRP--DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC 231

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
            +G++E A   F ++ +  L  T  T+  L+  L K    ++   F +KM      P+L+
Sbjct: 232 ASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  L+  +   G++ E      E   R    + VTY ++I GLCK  RV+E      +M
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G  P+ +TY  LIDGF  A    KA R++ Q+  +G   S VTYN+++    KAG  
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A      MEERG   + VTY+ L+D F    ++  A E++  M   G  P++ +Y ++
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY-RALRLLGEMNEKG 520
           I GLC  G + +A   F  + + +L P+   +N  + G C+  ++    + L   M  +G
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
             PN+ SYS  +  +C+ G       + ++M+  G+ P V ++N L R
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 262/573 (45%), Gaps = 25/573 (4%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMS 59
           + +N + R  +L   +AFS+   A R G +    + ++ +              LL KM 
Sbjct: 46  VVINGLCREKRLD--EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
                        ++ G + +        +  L Q+    ++P  K+  Y  +ID   K+
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLD--EAMAILEQMVEKGNSPTLKT--YTVVIDGLSKA 159

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCK--VELD 174
              ++A   F  ML +G RP +  + +L+  + K    D+  ++ +   EN C   VE D
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V    ++I+  C +G+L  A    ++L++         +  L+   CK    E A    +
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVK 278

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ E     T  TYT L+ G  K G   +     ++    G  P   TY  +I   C  G
Sbjct: 279 KMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG 338

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +V EG + F EMR+R    + VTY  LI G  K   + +A R+  QM  +G   + +TYN
Sbjct: 339 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 398

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            ++DG C AG   +A+  F  ++  G   +VVTY+ L+  F   GN   A +L R M +R
Sbjct: 399 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK-GNMKE 473
           G  P+ V+Y I+I    R+  + KA+  +  + +    PDVYT+   +HGLC +   + +
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGD 518

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +LF SM      PN   Y++++ G C+ G     L +  EM  +G+ P++  +++ I 
Sbjct: 519 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC  G+  EA  +  ++ +     + S +++L
Sbjct: 579 WLCIAGRVDEALEVFRELERRSAPDAWSYWSLL 611



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 221/456 (48%), Gaps = 6/456 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSG----VRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           +Y ++I    K    D+AL Y +QM+++G    V P     N ++  +  S + +    +
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F E    ++L  ++F  L+   C+A    +A   + ++ E    P +  YTSL+DG  K 
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A +  ++  E G +    TYT +I GL K G  ++G E + +M+  G  P   TY
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI  +     + +  +++ +M       + VTYN ++ GLCK  RV EA      M+ 
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G    V+TY+ L+DGFC  G    A  LF ++   G  P++V+YN++IR   +AG    
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFV-RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           A     ++ +R + P   T+   +     R D +    E++  M   G SP++++Y +L+
Sbjct: 483 AYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILM 542

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G+C  G ++   ++F+ M    + P+ VV+N +I   C  G    AL +  E+ E+   
Sbjct: 543 DGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSA 601

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           P+  SY S +  L +  +  EA +L   M   G  P
Sbjct: 602 PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 205/463 (44%), Gaps = 40/463 (8%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
            +LL  + K+   D+  L   E  C    D+ +F ++I G C    L++AF VL +    
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCSP--DMVAFTVVINGLCREKRLDEAFSVLERAVRA 70

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  P+ V Y   IDG CK   ++ A  L +K+ E   + T  TYT L+ GL K G   + 
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               E+M   G SP+L TY  +I      G+V E  ++F +M       +   Y  LI G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 325 LCKEMRVQEAERLLDQMK----MAGISPNVI----------------------------- 351
           L K  ++ EA   L+QM       G+ P+V+                             
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSL 250

Query: 352 -----TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
                T+N L+   C A  T++A     ++      P++ TY  L+  F K G    A  
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            ++E  ERG  P  VTYT +ID   +   +E+  E +  M+  G+ PD  TY  LI G  
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + +A +++  M ++    + V YN+++ G CK G    A      M E+G V  + 
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +YS+ +   C +G    A  L  +ML  G +P++  YNI+ R 
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 473



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 180/354 (50%), Gaps = 3/354 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D  LK    D+AL    + ++ G  P + T+ S++  + K    ++G   F E R
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  E D  ++  LI G  +A  + KA  V  Q+ + G   + V Y  ++DG CK G + 
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F  + E G VAT  TY+ L+ G    G      E + +M   G  P+L +YN +I
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM-RVQEAERLLDQMKMAGI 346
              C  GK+++ +  F+++  R +  +V T+N+ + GLC+ +  V +   L + M   G 
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGT 531

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN+ +Y+ L+DG C AG  +    +F+++ S G +P VV +N LIR    AG    A +
Sbjct: 532 SPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALE 591

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           + RE+E R   P   +Y  L+D+  R + ME+A  +   M+  G +P  Y   V
Sbjct: 592 VFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRHYDLTV 644



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 165/359 (45%), Gaps = 8/359 (2%)

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           + T+L++G CK G ++RA +L   + E+        +TV+I GL +     + F   E+ 
Sbjct: 11  VCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
              G  P   TYN  I   C   +V + F+L  +M  ++     VTY  L+ GL K  R+
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA  +L+QM   G SP + TY  +IDG   AG  ++A R+F  +  NG  P    Y  L
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187

Query: 392 IRAFSKAGNSKMASDLVREMEE----RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           I   +K G    A   + +M E    RG+ P  V + ++I     S ++E A   +  + 
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD 247

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            S      +T+  L+  LC     +EA      M E +  P    Y  ++ G+ K G   
Sbjct: 248 DS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AL  L E  E+G +P+  +Y+S I  LC+ G+  E     ++M   G +P    Y  L
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 205/398 (51%), Gaps = 3/398 (0%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV  D+ +FGILI  CC+AG LN  F  L Q+ + G     V +T L+   C       A
Sbjct: 139 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDA 198

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ ELG      +YT L+ GL      ++  E    M  +G    P++ +Y  +
Sbjct: 199 MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +  EG V + + LF +M    +  NVVT N++I GLCK   + +AE +L QM    I
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN LI G+  +G+  +A R+  ++  +GQ P+VVTY++LI    K+G    A +
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M + G  P+  TY  L+  +    ++     +  LM ++G  P  + + + I+  C
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + EAS  FN M +    P+ V Y  +I G CK G    A+    +M + GL P+I 
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDII 498

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           ++++ I      GKW +AE L  +M+  G+ P+V+ +N
Sbjct: 499 TFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFN 536



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 210/440 (47%), Gaps = 4/440 (0%)

Query: 131 QMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
           Q++ +G+R ++ TF  LL  +   K  S     +           DV+S+  L+KG C  
Sbjct: 169 QIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAE 228

Query: 189 GDLNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
               +A E+++ + E G    PNVV YT++I G  K GD+ +A  LF K+ + G+     
Sbjct: 229 KKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVV 288

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T   +I GL K           ++M    + P+  TYN LIH Y + G+ +E  ++  EM
Sbjct: 289 TCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEM 348

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  NVVTY+ LI  LCK     EA  + + M  +G  PN  TY  L+ G+   G  
Sbjct: 349 SRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNL 408

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
                + + +  NG  P    +N+ I A+ K G    AS    +M+++G  P  V YT +
Sbjct: 409 VDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTV 468

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID   +   ++ A   +  M   G SPD+ T+  LIHG  + G  ++A +LF  M +  +
Sbjct: 469 IDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN   +N MI    KEG    A +L   M   G  PN+ SY++ I      G+  E   
Sbjct: 529 PPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 588

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           LL+ ML +GLKP+   +N L
Sbjct: 589 LLDDMLLIGLKPTAVTFNTL 608



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 257/592 (43%), Gaps = 54/592 (9%)

Query: 9   GQALTLN-LISRMAKLP--------PLKAFSLFNWASRQGLQHTPQSIS---IILRLLLS 56
           G    LN L++ +A+ P        P  A S+FN  +R G +     I+   I++     
Sbjct: 97  GSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCD 156

Query: 57  KMSSHSHAAAQTLILKIISGRITSSSFTP--RSLLCH----------LTQLFPSSSNPVT 104
               +   AA   I+K    R  + +FTP  R+L             L ++      P  
Sbjct: 157 AGCLNLGFAALGQIIKT-GLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDV 215

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSG--VRPRSNTFNSLLIFVIKSCSFDKGWL 162
            S  Y +++      +  ++A    H M + G    P   ++ +++    K     K + 
Sbjct: 216 FS--YTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYT 273

Query: 163 FFSENRCK-----VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            F    CK     +  +V +   +I G C+   ++KA  VL Q+ +    PN   Y SLI
Sbjct: 274 LF----CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLI 329

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G   +G    A  + +++   G      TY++LI  L K+GL  +  E +  M  +G  
Sbjct: 330 HGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQK 389

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TY  L+H Y  EG + +   + D M    +      +N  I   CK  R+ EA   
Sbjct: 390 PNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLT 449

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M+  G  P+++ Y  +IDG C  G  D A   F Q+  +G SP ++T+N LI  F+ 
Sbjct: 450 FNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFAL 509

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A +L  EM +RGI P+  T+  +ID   +   + +A +++ LM ++G  P+V +
Sbjct: 510 HGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVS 569

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  +IHG  + G + E  KL + M    L+P  V +N ++ G                M 
Sbjct: 570 YNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MV 613

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             GL P++ +  + I   C+DG+  +   L  +ML    K      NI  R 
Sbjct: 614 SMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRG 665



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 17/218 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++ID   K    D A+  F QM+D G+ P   TFN+L+        ++K   LF+   
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +V +F  +I    + G + +A ++ + +   G  PNVV Y ++I G    G++ 
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L   +  +GL  T  T+  L+ G+   GL+                P + T   LI
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLK----------------PDVVTCKTLI 628

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              C +G++ +   LF EM  +    + +T N  + G+
Sbjct: 629 DSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 223/458 (48%), Gaps = 34/458 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K   SD+A   +H+MLD G+ P   T+NS+                     
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI--------------------- 237

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                        I   C+A  ++KA EVLN + + G  P+ + Y S++ G C +G  + 
Sbjct: 238 -------------IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A    +K+   G+     TY++L+  L KNG   +  + ++ M   G+ P + TY  L+ 
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y  +G + E   L D M    +  +   ++ LIC   K+ +V +A  +  +M+  G++P
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 404

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N +TY  +I   C +G  + A   F Q+   G SP  + YN LI         + A +L+
Sbjct: 405 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM +RGI  + + +  +IDS  +   + ++ +++ LM + G  P+V TY  LI+G C+ 
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M EA KL + M    L+PN V Y+ +I GYCK      AL L  EM   G+ P+I +Y
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  L Q  +   A+ L  ++ + G +  +S YNI+
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 39/436 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  D+ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ ELG +    +Y +L+ GL      ++  E    M  +   G  P + +Y  
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG   + +  + EM  R +  +VVTYN++I  LCK   + +A  +L+ M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TYN ++ G+C +G+  +A     +++S+G  P VVTY++L+    K G    A 
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 406 DLVREMEERGITPSEVTY-----------------------------------TILIDSF 430
            +   M +RG+ P   TY                                   +ILI ++
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +++A  ++S M++ G +P+  TYG +I  LC  G +++A   F  M +  L P +
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +VYN +I G C      RA  L+ EM ++G+  N   ++S I   C++G+  E+E L   
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 551 MLKLGLKPSVSLYNIL 566
           M+++G+KP+V  YN L
Sbjct: 502 MVRIGVKPNVITYNTL 517



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSEN 167
           Y SI+  +  S    +A+ +  +M   GV P   T++ L+ ++ K+    +   +F S  
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ ++ ++G L++G    G L +   +L+ +   G  P+  +++ LI    K G ++
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M   G+SP    YN LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K     +L  EM  R +  N + +N++I   CKE RV E+E+L + M   G+ 
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITYN LI+G+C AG+ D+A +L + + S G  P+ VTY+ LI  + K    + A  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HGLC 
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                +A ++F ++    L+     +N+MI    K G +  A  L    +  GLVPN  +
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y      +   G   E + L   M   G      + N + R
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 216/472 (45%), Gaps = 3/472 (0%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y  ++D   K+    +A   F  M   G++P 
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVT--YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  +  D Y F ILI    + G +++A  V +
Sbjct: 336 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFS 395

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PN V Y ++I   CK+G +E A + F ++ + GL      Y  LI GL    
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             +   E   +M   G+  +   +N +I  +C EG+V E  KLF+ M    V  NV+TYN
Sbjct: 456 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ PN +TY+ LI+G+C     + A  LF +++S+
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP ++TYN++++   +   +  A +L   + E G      TY I++    ++   + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M+  +       +  T+ ++I  L   G   EA  LF +     L PN   Y +M   
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
              +G      +L   M + G   +    +  +  L Q G+   A   L+ +
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 2/380 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    KS   + A+ YF QM+D G+ P +  +NSL+  +     +++      E  
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++   +  +G  PNV+ Y +LI+G C  G ++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +GL     TY+ LI G  K    +D    +++M+ +GVSP + TYN ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  + +   +L+  +        + TYN ++ GLCK     +A ++   + +  + 
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +ID     G  D+A  LF    SNG  P+  TY ++       G  +    L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ME+ G T        ++   ++  ++ +A    S++ +  FS +  T  + I  L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767

Query: 468 KGNMKEASKLFNSMWETKLE 487
            G  +E  +     +++ +E
Sbjct: 768 GGKYQEYYRFLPEKYKSFIE 787



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 12/212 (5%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR--EMEERG---ITPSEV 421
           + A  +F++L   G+  S+   N   RA +       A+ + R   M   G   +TP   
Sbjct: 32  EDARHVFDELLRRGRGASIYGLN---RALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL-FNS 480
           TY ILI    R+  ++  F     + K GF  D   +  L+ GLC      +A  +    
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK---GLVPNIASYSSTIGVLCQ 537
           M E    PN   YN+++ G C E  S  AL LL  M +    G  P++ SY++ I    +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G   +A    ++ML  G+ P V  YN +  A
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 217/431 (50%), Gaps = 40/431 (9%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC--KNGDIERAKML 232
           VY++ ILI  CC A  L+ AF     L   G   +V++ +SL+ G C  K  D E   +L
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTD-EAVDVL 161

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM--QLNGVSPSLYTYNCLIHEY 290
           F ++ ELG V    +Y+ ++  +  +G  +   +       Q  G   ++  Y+ ++H  
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGL 221

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
             EGKV E   LF EM  + V  NVVTYN++I  LCK   V +A+ +L QM   G+ P+ 
Sbjct: 222 FKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT----------------------- 387
           +TYN LI G+   G+  +A R+F ++ S G  P+ VT                       
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341

Query: 388 ------------YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
                       Y+ L+  ++ AG     S+L   M   GI P++  + IL++ + +   
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           + +A  ++  MQK G +PDV TY  +IH  C  G+M +A   FN M +  +EPN  VY  
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G+C  G+  +A  L+ E+  KGL P I S++S I  LC++G+  EA+ + + +++ G
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521

Query: 556 LKPSVSLYNIL 566
            K  V+++  L
Sbjct: 522 EKADVNIFTSL 532



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 225/461 (48%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  +       QA+  F +M   GV P + T ++ + F+ K    ++   FF    
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  +L++ S+  L+ G   AG L     + N +   G  PN  ++  L++G  K G + 
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  + + GL     TY  +I    + G   D  + +  M   GV P+   Y CLI
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G + +  +L  E+R++ +   ++++ +LI  LCKE RV EA+R+ D +   G  
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V  +  LIDG+C  G+  +AFR+ + + S G  P +VTY  L+    K G       L
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLIL 583

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            RE+  +G+ P+  TY I++D    +     A EM+  M +SG +  + TY +L+ GLC 
Sbjct: 584 FRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
               +EA  +F  +    ++ + V+ N+MI    K      A  L   + + GLVP + +
Sbjct: 644 NNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQT 703

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y+  +  L ++G   EAE + + MLK GL P+    N++ R
Sbjct: 704 YTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVR 744



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 221/462 (47%), Gaps = 4/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG--WLFFSE 166
           Y  +ID   ++R  D A  +F  +L  G++      +SLL  +  +   D+    LF   
Sbjct: 106 YSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRM 165

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSP-NVVIYTSLIDGCCKNG 224
                  D  S+  ++K  C+ G    A ++L   +++ G  P NVV+Y++++ G  K G
Sbjct: 166 PELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEG 225

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  A  LF ++ + G+     TY  +I  L K            +M  NGV P   TYN
Sbjct: 226 KVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYN 285

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH Y   G+  +  ++F EM  R V  N VT +T +  LCK  R++EA    D M   
Sbjct: 286 TLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAK 345

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G   N+I+Y+ L+ G+  AG       LFN +  +G  P+   +N+L+  ++K G  + A
Sbjct: 346 GHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREA 405

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             +  +M++RG+ P  +TY  +I +F R   M+ A + ++ M   G  P+   Y  LI G
Sbjct: 406 MFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQG 465

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G++ +A +L   +    L P  + +  +I   CKEG  + A R+   +   G   +
Sbjct: 466 FCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKAD 525

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  ++S I   C  GK  EA  + + M+ +G++P +  Y  L
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 232/474 (48%), Gaps = 14/474 (2%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQAL-FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++ +  S L   + DA    + +D+A+   FH+M + G  P + +++++L  V   C   
Sbjct: 136 ADVIVVSSLLRGLCDA----KRTDEAVDVLFHRMPELGCVPDAISYSTVLKSV---CDDG 188

Query: 159 KGWLFFSENRCKVE------LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
           +        R  V+       +V  +  ++ G  + G + +A ++ +++ + G  PNVV 
Sbjct: 189 RSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVT 248

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y S+I   CK   +++A+ + R++   G+     TY  LI G    G  K     +++M 
Sbjct: 249 YNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMT 308

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             GV P+  T +  +   C  G++ E  + FD M  +    N+++Y+TL+ G      + 
Sbjct: 309 SRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLV 368

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +   L + M   GI PN   +N L++G+   G   +A  +F  ++  G +P V+TY  +I
Sbjct: 369 DMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVI 428

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
            AF + G+   A D    M ++G+ P+   Y  LI  F    D+ KA E+   ++  G  
Sbjct: 429 HAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG 488

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P + ++  LI+ LC +G + EA ++F+ +  T  + +  ++  +I GYC  G    A R+
Sbjct: 489 PCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRV 548

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              M   G+ P+I +Y + +   C++G+  +  +L  ++L  G+KP+   Y I+
Sbjct: 549 HDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGII 602



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 214/459 (46%), Gaps = 34/459 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++    K     +A   FH+M   GV P   T+NS+                    
Sbjct: 213 VYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSV-------------------- 252

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                         I   C+A  ++KA  +L Q+   G  P+ V Y +LI G    G  +
Sbjct: 253 --------------IHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWK 298

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +F+++   G++    T +  +  L K+G  ++  EF++ M   G   ++ +Y+ L+
Sbjct: 299 QAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLL 358

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y   G + +   LF+ M    +  N   +N L+ G  K   V+EA  + + M+  G++
Sbjct: 359 HGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN 418

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+TY  +I  FC  G  D A   FN +   G  P+   Y  LI+ F   G+   A +L
Sbjct: 419 PDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           V E+  +G+ P  +++  LI+   +   + +A  ++ ++ ++G   DV  +  LI G C+
Sbjct: 479 VYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M EA ++ ++M    +EP+ V Y  ++ G CK G     L L  E+  KG+ P   +
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFT 598

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y   +  L   G+   A+ +  +M++ G+  ++  Y+IL
Sbjct: 599 YGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSIL 637



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 200/417 (47%), Gaps = 3/417 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCC 186
           F+ M+  G+ P  + FN +L+     C   +  +F  E+  K  L  DV ++  +I   C
Sbjct: 374 FNLMVRDGIVPNQHVFN-ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G ++ A +  N + + G  PN  +Y  LI G C +GD+ +A+ L  +I   GL     
Sbjct: 433 RMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCIL 492

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           ++  LI  L K G   +    ++ +   G    +  +  LI  YC  GK+SE F++ D M
Sbjct: 493 SFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAM 552

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  ++VTY TL+ G CK  R+ +   L  ++   G+ P   TY  ++DG   AG T
Sbjct: 553 VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRT 612

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A  +F ++  +G + ++ TY++L+    +   ++ A  + +++    +    V   I+
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIM 672

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I    ++   E+A  +++ +   G  P V TY +++  L  +G+++EA  +F+ M ++ L
Sbjct: 673 ISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGL 732

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
            P     N+++    ++G   +A   +  ++ K ++   ++ S  + +    GK  E
Sbjct: 733 SPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHRE 789



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 38/257 (14%)

Query: 348 PNVITYNKLID-----------------------------------GFCDAGETDKAFR- 371
           P V TY+ LID                                   G CDA  TD+A   
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR-EMEERGITPSE-VTYTILIDS 429
           LF+++   G  P  ++Y+ ++++    G S+ A D++R  +++ G  P   V Y+ ++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   + +A +++  M + G  P+V TY  +IH LC    + +A  +   M    ++P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           +V YN +I GY   G   +A+R+  EM  +G++PN  + S+ +  LC+ G+  EA    +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 550 QMLKLGLKPSVSLYNIL 566
            ML  G K ++  Y+ L
Sbjct: 341 SMLAKGHKLNIISYSTL 357


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 205/406 (50%), Gaps = 10/406 (2%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE------MGFSPNVVIYTSLIDGCCKN 223
           K+   V +FGIL+   C+A  +++A +V ++L        +G  P+VV++ +LIDG CK 
Sbjct: 311 KIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKV 370

Query: 224 GDIERAKMLFR--KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           G  E    L    K+G +    T  TY  LI G FK G      E + +M   GV P++ 
Sbjct: 371 GKEEDGLSLLEEMKMGNINRPNTV-TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVI 429

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T N L+   C  G+V    + F+EM+ + +  N  TY  LI   C    +  A +  ++M
Sbjct: 430 TLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEM 489

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G SP+ + Y  LI G C AG  + A  + ++LK  G S     YNVLI  F K    
Sbjct: 490 LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKL 549

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           +   +L+ EMEE G+ P  +TY  LI    ++ D   A ++   M K G  P V TYG +
Sbjct: 550 ERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAI 609

Query: 462 IHGLCMKGNMKEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           IH  C K N+ E  K+F  M  T K+ PN V+YN++I   C+  +  RA+ L+ +M  K 
Sbjct: 610 IHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKR 669

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + PN  +Y++ +  +       +A  L+++M++   +P      +L
Sbjct: 670 VRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 270/575 (46%), Gaps = 39/575 (6%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI 73
           L +  +++ +P  K+     + S +  QH P S+S + +  L   S H ++  QT +L +
Sbjct: 71  LQITLQLSSIP--KSLQFLKYLSAKAPQHHPHSLSSVFQGSLELASRHPNS--QTHLLSL 126

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
              R ++    P +              P + S L + + +A    RL + +L  F+Q+ 
Sbjct: 127 HRFRKSTHPTLPLT--------------PKSASLLLQCLENA----RLVNDSLLLFNQLD 168

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE----NRCKVELDVYSFGILIKGCCEAG 189
            S   P+    + LL  ++KS           E    N          FG L++      
Sbjct: 169 PSSKSPQ--LCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFP 226

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D  +   ++ +L E G  P+    T L+   C +     A  +   +  LG      +  
Sbjct: 227 D-GEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCN 285

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+  L +    K   E   +M+   + PS+ T+  L++  C   ++ E  ++FD +R +
Sbjct: 286 ALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGK 345

Query: 310 E------VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-PNVITYNKLIDGFCD 362
                  V  +VV +NTLI GLCK  + ++   LL++MKM  I+ PN +TYN LIDGF  
Sbjct: 346 GGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFK 405

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           AG  D+A  LF Q+   G  P+V+T N L+    K G    A +   EM+ +G+  +  T
Sbjct: 406 AGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAAT 465

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT LI +F   +++ +A + +  M  SG SPD   Y  LI GLC+ G M +AS + + + 
Sbjct: 466 YTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLK 525

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                 +   YN++I G+CK+    R   LL EM E G+ P+  +Y++ I  L + G + 
Sbjct: 526 LAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            A  ++ +M+K GL+PSV  Y  +   Y +K N++
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVD 620



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 190/413 (46%), Gaps = 50/413 (12%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-------VELDVYSFGILIK 183
           +M    +RP   TF  L+  + K+   D+    F   R K       VE DV  F  LI 
Sbjct: 306 EMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLID 365

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFS----PNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           G C+ G   K  + L+ LEEM       PN V Y  LIDG  K G+ +RA  LFR++ E 
Sbjct: 366 GLCKVG---KEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE 422

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+     T   L+ GL K+G      EF+ +M+  G+  +  TY  LI  +C    ++  
Sbjct: 423 GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRA 482

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            + F+EM     + + V Y +LI GLC   R+ +A  ++ ++K+AG S +   YN LI G
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           FC   + ++ + L  +++  G  P  +TYN LI    K G+   AS ++ +M + G+ PS
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602

Query: 420 EVTY------------------------------------TILIDSFVRSDDMEKAFEMY 443
            VTY                                     ILID+  R++D+++A  + 
Sbjct: 603 VVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLM 662

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
             M+     P+  TY  ++ G+  K  + +A +L + M E    P+ +   ++
Sbjct: 663 EDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 3/369 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGV-RPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           L+ ++ID   K    +  L    +M    + RP + T+N L+    K+ +FD+   LF  
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N   V+ +V +   L+ G C+ G +++A E  N+++  G   N   YT+LI   C   +
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I RA   F ++   G       Y  LI GL   G   D      K++L G S     YN 
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C + K+   ++L  EM    V  + +TYNTLI  L K      A +++++M   G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMA 404
           + P+V+TY  +I  +C     D+  ++F ++ S  +  P+ V YN+LI A  +  +   A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L+ +M+ + + P+  TY  ++        + KAFE+   M +    PD  T  VL   
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEW 718

Query: 465 LCMKGNMKE 473
           L   G +++
Sbjct: 719 LSAVGEIEK 727



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 2/345 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   K+   D+A   F QM + GV+P   T N+L+  + K     +   FF+E +
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ +  ++  LI   C   ++N+A +   ++   G SP+ V+Y SLI G C  G + 
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMN 515

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++  K+   G    +  Y VLI G  K    +  +E   +M+  GV P   TYN LI
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI 575

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGI 346
                 G  +   K+ ++M    +  +VVTY  +I   C +  V E  ++  +M   + +
Sbjct: 576 SYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKV 635

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + YN LID  C   + D+A  L   +K     P+  TYN +++          A +
Sbjct: 636 PPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFE 695

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           L+  M E    P  +T  +L +      ++EK        Q S +
Sbjct: 696 LMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSY 740


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 200/386 (51%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E D Y++  LI+G C  G    A  VL+ +   G  P+VV YT L++  CK    ++A 
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++   G      TY V++ G+ + G   D  EF + +  +G  P+  +YN ++   
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +  +  KL  EM  +    NVVT+N LI  LC+   V+ A  +LDQ+   G +PN 
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN ++  FC   + D+A      + S G  P +V+YN L+ A  + G    A +L+ +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++G TP  ++Y  +ID   ++   ++A E+ + M   G  PD+ TY  +  GLC +  
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDR 451

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++EA + F  + +  + PN V+YN ++ G CK   ++ A+ L   M   G +PN ++Y+ 
Sbjct: 452 IEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTI 511

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            I  L  +G   EA  LL ++   G+
Sbjct: 512 LIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 226/491 (46%), Gaps = 13/491 (2%)

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
           T+   TP S L        +S N V    +    +   ++    ++AL     M  SG+ 
Sbjct: 32  TTKPLTPNSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLE 89

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENR---CKVELDVYSFGILIKGCCEAGDLNKAF 195
           P S         + K C+  +     +E R      E DV ++  ++ G C  G L+ A 
Sbjct: 90  P-SAAPGPCAALIKKLCASGR----TAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAAR 144

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            ++    +M   P+   Y +LI G C  G    A ++   +   G V    TYT+L+   
Sbjct: 145 RLV---ADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEAT 201

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K    K   +  ++M+  G +P + TYN +++  C EG+V +  +    +       N 
Sbjct: 202 CKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT 261

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           V+YN ++ GLC   R ++AE+L+ +M   G  PNV+T+N LI   C  G  + A  + +Q
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G +P+ ++YN ++ AF K      A   V  M  RG  P  V+Y  L+ +  R  +
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A E+   ++  G +P + +Y  +I GL   G  KEA +L N M    L+P+ + Y+ 
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +  G C+E     A+R   ++ + G+ PN   Y++ +  LC+  +   A  L   M+  G
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501

Query: 556 LKPSVSLYNIL 566
             P+ S Y IL
Sbjct: 502 CMPNESTYTIL 512



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 16/320 (5%)

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC--LIHEYCNEGKVSEGFKLFDEMRHREV 311
           GL + G  ++     E M  +G+ PS     C  LI + C  G+ +E  ++         
Sbjct: 68  GLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-------A 118

Query: 312 AC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           AC  +V+ YN ++ G C   ++  A RL+  M M    P+  TYN LI G C  G T  A
Sbjct: 119 ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNA 175

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             + + +   G  P VVTY +L+ A  K    K A  L+ EM  +G  P  +TY ++++ 
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   ++ A E    +   G  P+  +Y +++ GLC     ++A KL   M +    PN
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V +NM+I   C+ G    A+ +L ++ + G  PN  SY+  +   C+  K   A   + 
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355

Query: 550 QMLKLGLKPSVSLYNILYRA 569
            M+  G  P +  YN L  A
Sbjct: 356 LMVSRGCYPDIVSYNTLLTA 375



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+ A  K +  D+A+ +   M+  G  P   ++N+LL  + +    D       + +
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393

Query: 169 CKVELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    V  S+  +I G  +AG   +A E+LN++   G  P+++ Y+++  G C+   IE
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F K+ ++G+      Y  ++ GL K     +  + +  M  NG  P+  TY  LI
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILI 513

Query: 288 HEYCNEGKVSEGFKLFDEMRHREV 311
                EG V E  +L  E+  R V
Sbjct: 514 EGLTYEGLVKEARELLGELCSRGV 537



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 11/157 (7%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL      PV  S  Y ++ID   K+  + +AL   ++M+  G++P   T++++   +
Sbjct: 389 LHQLKDKGCTPVLIS--YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 152 IKSCSFDKGWLFFSENRCKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            +    ++    F    CKV+      +   +  ++ G C+  + + A ++   +   G 
Sbjct: 447 CREDRIEEAIRAF----CKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGC 502

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
            PN   YT LI+G    G ++ A+ L  ++   G+V+
Sbjct: 503 MPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVS 539


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 213/417 (51%), Gaps = 2/417 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P    +N+++     +   D    + +E    VE D Y+   LI+G C  G    A  VL
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAER--AVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           +++      P+VV YT L++  CK    ++A  L  ++ + G      TY V++ G+ + 
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G   D  EF + +   G  P+  +YN ++   C   +  +  +L  EM  +    NVVT+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI  LC++  V+ A  +L+Q+   G SPN ++YN L+  FC   + DKA    + + S
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P +V+YN L+ A  ++G   +A +L+ +++++G  P  ++Y  +ID   ++   ++
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+ + M   G  PD+ TY  +  GLC +  +++A + F  + +  + PN V+YN +I 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           G CK   ++ A+ L   M   G +PN ++Y+  I  L  +G   EA  LL+++   G
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 193/393 (49%), Gaps = 8/393 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +   LIK    +G   +A  VL         P+V+ Y +++ G C  G ++ A+   
Sbjct: 97  DAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMMAGYCGAGQVDAAR--- 148

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R   E  +    +T   LI GL   G   +     ++M      P + TY  L+   C  
Sbjct: 149 RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 208

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  KL DEMR +    ++VTYN ++ G+C+E RV +A   L  +   G  PN ++Y
Sbjct: 209 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 268

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++ G C A   + A  L  ++   G  P+VVT+N+LI    + G  + A +++ ++ +
Sbjct: 269 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 328

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G +P+ ++Y  L+ +F +   M+KA     LM   G  PD+ +Y  L+  LC  G +  
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L + + +    P  + YN +I G  K G +  AL LL EM  KGL P+I +YS+   
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC++ +  +A     ++  +G++P+  LYN +
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 188/393 (47%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  ++ G C AG ++ A        E     +     +LI G C  G    A  + 
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARR---WCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++     V    TYT+L+    K    K   +  ++M+  G +P + TYN +++  C E
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V +  +    +       N V+YN ++ GLC   R ++AE L+ +M   G  PNV+T+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  + A  +  Q+   G SP+ ++YN L+ AF K      A   +  M  
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  P  V+Y  L+ +  RS +++ A E+   ++  G +P + +Y  +I GL   G  KE
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L N M    L+P+ + Y+ +  G C+E     A+R  G++ + G+ PN   Y++ I 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +   A  L   M+  G  P+ S Y IL
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 172/376 (45%), Gaps = 37/376 (9%)

Query: 227 ERAKMLFRKIGELG----LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +R + L R+ GEL     LV +        C      L   G     +  L    P +  
Sbjct: 72  DRLRSLVRR-GELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMA 130

Query: 283 YNCLIHEYCNEGKV--------------------------------SEGFKLFDEMRHRE 310
           YN ++  YC  G+V                                +    + DEM  R 
Sbjct: 131 YNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR 190

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +VVTY  L+   CK    ++A +LLD+M+  G +P+++TYN +++G C  G  D A 
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                L S G  P+ V+YN++++    A   + A +L+ EM ++G  P+ VT+ +LI   
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 310

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R   +E A E+   + K G SP+  +Y  L+H  C +  M +A    + M      P+ 
Sbjct: 311 CRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 370

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN ++   C+ G    A+ LL ++ +KG  P + SY++ I  L + GK  EA  LLN+
Sbjct: 371 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430

Query: 551 MLKLGLKPSVSLYNIL 566
           M+  GL+P +  Y+ +
Sbjct: 431 MVSKGLQPDIITYSTI 446



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 34/373 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++A  K     QA+    +M D G  P                             
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTP----------------------------- 228

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                D+ ++ +++ G C+ G ++ A E L  L   G  PN V Y  ++ G C     E 
Sbjct: 229 -----DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ L  ++G+ G      T+ +LI  L + GL +   E  E++   G SP+  +YN L+H
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C + K+ +     D M  R    ++V+YNTL+  LC+   V  A  LL Q+K  G +P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
            +I+YN +IDG   AG+T +A  L N++ S G  P ++TY+ +     +    + A    
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            ++++ GI P+ V Y  +I    +  +   A ++++ M  +G  P+  TY +LI GL  +
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 523

Query: 469 GNMKEASKLFNSM 481
           G +KEA  L + +
Sbjct: 524 GLIKEARDLLDEL 536



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 14/308 (4%)

Query: 266 EFYEKMQLNGVS--PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTL 321
           E  E ++L G +  P   T   LI +    G+ +E  ++         AC  +V+ YN +
Sbjct: 82  ELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-------AACGPDVMAYNAM 134

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           + G C   +V  A R   +     +  +  T + LI G C  G T  A  + +++     
Sbjct: 135 MAGYCGAGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRC 191

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P VVTY +L+ A  K    K A  L+ EM ++G TP  VTY ++++   +   ++ A E
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 251

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               +   G  P+  +Y +++ GLC     ++A +L   M +    PN V +NM+I   C
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 311

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           ++G    AL +L ++ + G  PN  SY+  +   C+  K  +A   L+ M+  G  P + 
Sbjct: 312 RKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 371

Query: 562 LYNILYRA 569
            YN L  A
Sbjct: 372 SYNTLLTA 379



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M   G  P   TFN L+ F+ +    +       +  +     +  S+  L+   C+  
Sbjct: 290 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            ++KA   L+ +   G  P++V Y +L+   C++G+++ A  L  ++ + G      +Y 
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I GL K G  K+  E   +M   G+ P + TY+ +    C E ++ +  + F +++  
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N V YN +I GLCK      A  L   M   G  PN  TY  LI+G    G   +A
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529

Query: 370 FRLFNQLKSNGQ 381
             L ++L S G+
Sbjct: 530 RDLLDELCSRGE 541



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 1/202 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ A  K +  D+A+ +   M+  G  P   ++N+LL  + +S   D       + +
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397

Query: 169 CKVELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    V  S+  +I G  +AG   +A E+LN++   G  P+++ Y+++  G C+   IE
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 457

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F K+ ++G+      Y  +I GL K        + +  M  NG  P+  TY  LI
Sbjct: 458 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517

Query: 288 HEYCNEGKVSEGFKLFDEMRHR 309
                EG + E   L DE+  R
Sbjct: 518 EGLAYEGLIKEARDLLDELCSR 539


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 248/558 (44%), Gaps = 35/558 (6%)

Query: 17  ISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISG 76
           +S +A+  P  A SLFN   R  L      I    R      + H   A   L      G
Sbjct: 73  LSAVARESPAVALSLFNRMPRADLCTYSIVIGCCSR------AGHLDLAFAAL------G 120

Query: 77  RITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
           R+  + +T +++          + +P+ K   ++         R SD       +M   G
Sbjct: 121 RVIRTGWTAQAI----------TFSPLLKGLCHDK--------RTSDAMDIALRRMPALG 162

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGW-----LFFSENRCKVELDVYSFGILIKGCCEAGDL 191
             P + ++N LL  +       +       +   + R     DV S+  +I G    G L
Sbjct: 163 CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQL 222

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +KA+ + +++ + G SPN + Y  L+ G C +G  + A  +FRK+   G+     TY  L
Sbjct: 223 DKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTL 282

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +  L KNG   +  + ++ M   G  P    Y  L+H Y  EG + +  +L D M     
Sbjct: 283 MVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGT 342

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +   +N LI    K   V EA     +M+  G+ PN++TY  ++D  C  G+ D A  
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS 402

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            F++L S G +P+ V +  LI           A +L  EM  RGI P+ + +  L++   
Sbjct: 403 QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   + +A  ++ LM +     DV TY  LI G C+ G + EA+KL   M    ++PN+V
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEV 522

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN +I GYCK G    A  L  +M  KG+ P I  YS+ +  L Q  +   A+ L   M
Sbjct: 523 TYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582

Query: 552 LKLGLKPSVSLYNILYRA 569
           +K G+K  +  YNI+ + 
Sbjct: 583 IKCGIKLPIGTYNIILQG 600



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 212/432 (49%), Gaps = 1/432 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y  ++  +  S    +A+  F +M   GV P   T+N+L++++ K+  S +   +F S  
Sbjct: 244 YNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMV 303

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +   + D   +G L+ G    G L +  ++L+ +   G  P+  I+  LI    K+G ++
Sbjct: 304 KKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVD 363

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A + F K+ + GL     TY  ++  L + G   D    ++++   G++P+   +  LI
Sbjct: 364 EAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +NTL+  LCKE  V  A+ + D M    + 
Sbjct: 424 HGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ 483

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +VITY  LIDG+C  G+ D+A +L   +  +G  P+ VTYN +I  + K G  + A  L
Sbjct: 484 CDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSL 543

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R+M  +G+ P  V Y+ ++    ++  +  A E+Y  M K G    + TY +++ GLC 
Sbjct: 544 FRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQ 603

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                +A ++F+++        +  +N+MI    K G    A  L   +  +GLVPN+ +
Sbjct: 604 NNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVT 663

Query: 528 YSSTIGVLCQDG 539
           Y   +  L + G
Sbjct: 664 YWLMMKSLIEQG 675



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 1/377 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++  +I A+ K  + D+A+  F +M   G+ P   T+ +++  + +    D     F   
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             + +  +   F  LI G C     +KA E+  ++   G  PN + + +L++  CK G +
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RAK +F  +  + +     TYT LI G   +G   +  +  E M L+GV P+  TYN +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC  G++ +   LF +M  + V   +V Y+T++ GL +  R+  A+ L   M   GI
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              + TYN ++ G C    TD A R+F+ L          T+N++I A  K G    A D
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   +  RG+ P+ VTY +++ S +    +E+  +++  ++K+G + D      L+  L 
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLP 707

Query: 467 MKGNMKEASKLFNSMWE 483
            KG +++A    + + E
Sbjct: 708 QKGEVRKAGVYLSKIDE 724



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 163/355 (45%), Gaps = 1/355 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++DA  +    D A+  F +++  G+ P    F +L+  +     +DK      E  
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMI 443

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +   F  L+   C+ G + +A  + + +  +    +V+ YT+LIDG C +G ++
Sbjct: 444 GRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +   G+   + TY  +I G  KNG  +D    + +M   GV+P +  Y+ ++
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H      +++   +L+  M    +   + TYN ++ GLC+     +A R+   + +    
Sbjct: 564 HGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFH 623

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +ID     G  D+A  LF  L + G  P+VVTY +++++  + G  +   DL
Sbjct: 624 LQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDL 683

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
              +E+ G T        L+    +  ++ KA    S + ++ FS +  T   L+
Sbjct: 684 FLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 133/352 (37%), Gaps = 84/352 (23%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAG 189
           +M+  G+ P +  FN+LL  + K     +    F    R  V+ DV ++  LI G C  G
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +++A ++L  +   G  PN V Y ++I+G CKNG IE A  LFR++   G+      Y+
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYS 560

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE---------------- 293
            ++ GLF+        E Y  M   G+   + TYN ++   C                  
Sbjct: 561 TILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLI 620

Query: 294 -------------------GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
                              G+  E   LF  +  R +  NVVTY  ++  L ++  ++E 
Sbjct: 621 DFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEEL 680

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA------------------------- 369
           + L   ++  G + +    N L+      GE  KA                         
Sbjct: 681 DDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFL 740

Query: 370 ----------------FR-------LFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                           +R       +F+Q K+ G   +  +Y V+ R +S +
Sbjct: 741 VSSGKYDQHINSIPEKYRPTAKSRAVFSQKKNPGLFDAAGSYGVVTRLYSSS 792


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 233/454 (51%), Gaps = 17/454 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +I+D   K    ++A      M ++G+ P  NTFN   I V   C    GWL  +   
Sbjct: 86  YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFN---ILVSGYCKL--GWLKEAAEV 140

Query: 168 -----RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                R  V  DV ++  LI G C+ G +++AF + +++E +   P+VV Y  LI+GC +
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
                +   L  ++   G+     TY V++    K G   +      KM+ +G SP   T
Sbjct: 201 CSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 260

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           +N L + YC  G++SE F++ DEM  + +  N VT NT++  LC E ++ +A +LL    
Sbjct: 261 FNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 320

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G   + ++Y  LI G+   G++      ++++K     PS++TY  +I    ++G + 
Sbjct: 321 KRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTD 376

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            + D   E+ E G+ P + TY  +I  + R   ++KAF   + M K  F PD++T  +L+
Sbjct: 377 QSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILV 436

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPND-VVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
            GLC +G + +A KLF + W +K +  D V +N +I G C+EG    A  LL EM EK L
Sbjct: 437 RGLCTEGMLDKALKLFKT-WISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            P+  ++++ +  L   G+  EAE  ++ +++ G
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQG 529



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 228/437 (52%), Gaps = 8/437 (1%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWL---FFSEN-RCKVELDVYSFGILIKGCCEAGDLN 192
           ++P   T N+L+  +++  S    +L    FS+  +  VE++  +F ILI GCC    L+
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  ++ +++     P+ V Y +++D  CK G +  A+ L   +   GL   ++T+ +L+
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K G  K+  E  + M  N V P + TY  LI   C +GK+ E F+L DEM + ++ 
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VVTYN LI G  +     +   L+D+M+  G+ PN +TYN ++  +   G+ D A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             +++ +G SP  VT+N L   + KAG    A  ++ EM  +G+  + VT   ++ +   
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              ++ A+++ S   K G+  D  +YG LI G    G     S  ++ M E ++ P+ + 
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIIT 361

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  MI G C+ G + +++    E+ E GLVP+  +Y++ I   C++G+  +A    N+M+
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 553 KLGLKPSVSLYNILYRA 569
           K   KP +   NIL R 
Sbjct: 422 KKSFKPDLFTCNILVRG 438



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 201/393 (51%), Gaps = 4/393 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F IL+ G C+ G L +A EV++ +      P+V  YT+LI G CK+G I+ A  L  ++
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEM 179

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             L L+    TY +LI G F+      GFE  ++M+  GV P+  TYN ++  Y  EGK+
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKM 239

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
                   +M     + + VT+NTL  G CK  R+ EA R++D+M   G+  N +T N +
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 299

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +   C   + D A++L +     G     V+Y  LI  + K G S        EM+E+ I
Sbjct: 300 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWD----EMKEKEI 355

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            PS +TY  +I    RS   +++ +  + + +SG  PD  TY  +I G C +G + +A  
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
             N M +   +P+    N+++ G C EG   +AL+L      KG   +  ++++ I  LC
Sbjct: 416 FRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC 475

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++G++ EA  LL +M +  L P    +N +  A
Sbjct: 476 EEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSA 508



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 28/348 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           + ++ + + K+    +A     +M   G++  S T N++L  +      D  + L  S +
Sbjct: 261 FNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 320

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +    +D  S+G LI G  + G         ++++E    P+++ Y ++I G C++G  +
Sbjct: 321 KRGYFVDEVSYGTLIMGYFKVG----KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTD 376

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           ++     ++ E GLV  Q TY  +I G  + G     F F  KM      P L+T N L+
Sbjct: 377 QSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILV 436

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG + +  KLF     +  A + VT+NT+I GLC+E R +EA  LL +M+   + 
Sbjct: 437 RGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLG 496

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-----------------------SPS 384
           P+  T+N ++    DAG   +A    + +   G+                        P+
Sbjct: 497 PDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPN 556

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            V ++  I      G  K A  +++E  ++GI   + TY  L++  ++
Sbjct: 557 SVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 272/600 (45%), Gaps = 83/600 (13%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
            +HT  S+S ++ +L+    S   + AQ+ +L++I      S  +   ++  L   F   
Sbjct: 109 FKHTSLSLSAMIHILVR---SGRLSDAQSCLLRMIR----RSGVSRLEIVNSLDSTF--- 158

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SN  +   +++ +I  ++++R   +A   F  +   G     +  N+L+  +++    + 
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218

Query: 160 GWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNK------------------------- 193
            W  + E +R  V ++VY+  I++   C+ G + K                         
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278

Query: 194 ----------AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                     AFE++N +   GFSP V  Y ++I+G CK+G  ERAK +F ++   GL  
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP---------SLYT------------ 282
              TY  L+    K G   +  + +  M+   V P         SL+T            
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398

Query: 283 --------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
                         Y  LI  YC +G +S    L +EM  +  A +VVTYNT++ GLCK 
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             + EA++L ++M    + P+  T   LIDG C  G    A  LF ++K       VVTY
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N L+  F K G+   A ++  +M  + I P+ ++Y+IL+++      + +AF ++  M  
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
               P V     +I G C  GN  +       M      P+ + YN +I+G+ +E N  +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638

Query: 509 ALRLLGEMNEK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L+ +M E+  GLVP++ +Y+S +   C+  +  EAEV+L +M++ G+ P  S Y  +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 3/419 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K    ++A   F +ML SG+ P S T+ SLL+   K     +    FS+ R
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + V  D+  F  ++     +G+L+KA    N ++E G  P+ VIYT LI G C+ G I 
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ + G      TY  ++ GL K  +  +  + + +M    + P  YT   LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +    +LF +M+ + +  +VVTYNTL+ G  K   +  A+ +   M    I 
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P  I+Y+ L++  C  G   +AFR+++++ S    P+V+  N +I+ + ++GN+      
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGL 465
           + +M   G  P  ++Y  LI  FVR ++M KAF +   M+  + G  PDV+TY  ++HG 
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           C +  MKEA  +   M E  + P+   Y  MI G+  + N   A R+  EM ++G  P+
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 205/392 (52%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F +LI+   +A  L +A E    L   GF+ ++    +LI    + G +E A  ++++I 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+    +T  +++  L K+G  +    F  ++Q  GV P + TYN LI  Y ++G + 
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E F+L + M  +  +  V TYNT+I GLCK  + + A+ +  +M  +G+SP+  TY  L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
              C  G+  +  ++F+ ++S    P +V ++ ++  F+++GN   A      ++E G+ 
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  V YTILI  + R   +  A  + + M + G + DV TY  ++HGLC +  + EA KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           FN M E  L P+     ++I G+CK GN   A+ L  +M EK +  ++ +Y++ +    +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G    A+ +   M+   + P+   Y+IL  A
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNA 559



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 192/389 (49%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI      G +  A+ V  ++   G   NV     +++  CK+G +E+      ++ E G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     TY  LI      GL ++ FE    M   G SP +YTYN +I+  C  GK     
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F EM    ++ +  TY +L+   CK+  V E E++   M+   + P+++ ++ ++  F
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             +G  DKA   FN +K  G  P  V Y +LI+ + + G   +A +L  EM ++G     
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  ++    +   + +A ++++ M +    PD YT  +LI G C  GN++ A +LF  
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E ++  + V YN ++ G+ K G+   A  +  +M  K ++P   SYS  +  LC  G 
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EA  + ++M+   +KP+V + N + + 
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKG 594


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 249/530 (46%), Gaps = 39/530 (7%)

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
           SH+   +++L    I G I+S +   R       Q  PS+   V  ++L  SI      S
Sbjct: 28  SHNRFHSKSLHFNTIDGAISSFNRMLR------MQPPPST---VDFNKLLTSIAKMKHHS 78

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DV 175
            L    L   HQM   G+ P   T +   I +   C  ++    FS     ++L    D 
Sbjct: 79  TL----LSLSHQMDSFGIPPNIYTLH---ILINSFCHLNRVGFAFSVLAKILKLGHQPDT 131

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            +F  LI+G C  G + +A  + +++   GF P+VV Y +LI+G CK G+   A  L   
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +         Y  +I  L K+    + F  + +M   G+SP ++TYN LIH  CN  +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
                 L +EM   ++  +VV++NT++  LCKE +V EA  ++D+M   G+ PNV+TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG---------------- 399
           L+DG C   E D+A ++F+ +   G  P+V++YN LI  + K                  
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 400 ---NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
              N   A  +   M  +G  P+ ++Y  LI+ + +   ++KA  ++  M +    PD  
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LIHGLC    +++A  LF+ M      PN V Y +++   CK      A+ LL  +
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               L P+I   +  I  +C+ G+   A  L + +   GL+P V  Y+I+
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 541



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 227/450 (50%), Gaps = 21/450 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +IID+  K R   +A   F +M+  G+ P   T+NSL+  +   C +       +E  
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K+  DV SF  ++   C+ G + +A +V++++ + G  PNVV YT+L+DG C   +++
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   G +    +Y  LI G             Y K+Q   +  +++ Y  L+
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLING-------------YCKIQ--RIDKAIH-YTXLM 367

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C    + E  K+FD M  +    NV++YNTLI G CK  R+ +A  L  +M    + 
Sbjct: 368 DXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 427

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TY+ LI G C       A  LF+++ +  Q P++VTY +L+    K      A  L
Sbjct: 428 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 487

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++ +E   + P      I ID   R+ ++E A +++S +   G  PDV+TY ++I+GLC 
Sbjct: 488 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 547

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G + EASKLF  M E     N  +YN +  G+ +   + RA++LL EM  +G   + ++
Sbjct: 548 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 607

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            +  + +L  DG     +  L Q+L+ G K
Sbjct: 608 MTLFVKMLSDDG----LDQSLKQILRNGCK 633



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 215/472 (45%), Gaps = 59/472 (12%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGI 180
           D A+  F++ML     P +  FN LL  + K        L  S   +   +  ++Y+  I
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM-KHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI   C    +  AF VL ++ ++G  P+   +T+LI G C  G          KIGE  
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEG----------KIGE-- 149

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                                      ++KM   G  P + TY  LI+  C  G  S   
Sbjct: 150 -----------------------ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 186

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L   M  +    NV  YNT+I  LCK+ +V EA  L  +M   GISP++ TYN LI   
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C+  E      L N++  +   P VV++N ++ A  K G    A D+V +M +RG+ P+ 
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNV 306

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG----------- 469
           VTYT L+D      +M++A +++  M   G  P+V +Y  LI+G C              
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXL 366

Query: 470 --------NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
                   NM EA K+F++M      PN + YN +I GYCK     +A+ L GEM  + L
Sbjct: 367 MDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 426

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL--YRAKN 571
           +P+  +YS+ I  LC   +  +A  L ++M+     P++  Y IL  Y  KN
Sbjct: 427 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 183/406 (45%), Gaps = 25/406 (6%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A    N++  M   P+ V +  L+    K         L  ++   G+    +T  +
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           LI   C L + G     F    K+   G  P   T+  LI   C EGK+ E   LFD+M 
Sbjct: 102 LINSFCHLNRVGF---AFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 +VVTY TLI GLCK      A RLL  M      PNV  YN +ID  C   +  
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +AF LF+++ + G SP + TYN LI A       K  + L+ EM +  I P  V++  ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   + +A ++   M + G  P+V TY  L+ G C+   M EA K+F++M      
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 488 PNDVVYNMMIFGYCKEG-------------------NSYRALRLLGEMNEKGLVPNIASY 528
           PN + YN +I GYCK                     N   A+++   M  KG +PN+ SY
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISY 398

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           ++ I   C+  +  +A  L  +M +  L P    Y+ L     ++E
Sbjct: 399 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 444


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 220/465 (47%), Gaps = 42/465 (9%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCC 186
           QM   GV P   T N   I +   C  ++    FS     ++L    D  +F  LI+G C
Sbjct: 90  QMDSFGVPPNVYTLN---ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 146

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G + +A  + +++ + GF PNVV Y +LI+G CK G+   A  L R + +        
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 206

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN-------------- 292
            YT +I  L K+    + F  + +M   G+SP ++TY  L+H  CN              
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 293 ---------------------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
                                EGKV+E  ++ D M  R V  +VVTY TL+ G C +  +
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA ++ D M   G +P+VI+Y  LI+G+C   + DKA  LF ++      P   TYN L
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +      G  + A  L  EM  RG  P  VTY+IL+DS  ++  +E+A  +   ++ S  
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           +PD+  Y ++I G+C  G ++ A  LF+++    L P+   YN+MI G CK G    A +
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           L  EM+     P+  +Y++      Q+ +   A  LL +ML  G 
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 241/496 (48%), Gaps = 20/496 (4%)

Query: 42  HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL---CHLTQL--- 95
           H P SI    +LL S      ++   +L  ++ S  +  + +T   L+   CHL ++   
Sbjct: 60  HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 119

Query: 96  ---------FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
                         +P T + L   +    ++ ++  +AL  F +M+D G +P   T+ +
Sbjct: 120 FSVLAKILKLGHQPDPTTFTTLIRGLC---VEGKIG-EALHLFDKMIDEGFQPNVVTYGT 175

Query: 147 LLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           L+  + K  +      L  S  +   + DV  +  +I   C+   + +AF + +Q+   G
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
            SP++  YTSL+   C   + +    L  ++    ++     ++ ++  L K G   +  
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E  + M   GV P + TY  L+  +C + ++ E  K+FD M  +  A +V++Y TLI G 
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CK  ++ +A  L ++M      P+  TYN L+ G C  G    A  LF+++ + GQ P +
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTY++L+ +  K  + + A  L++ +E   + P    Y I+ID   R+ ++E A +++S 
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           +   G  P V+TY ++IHGLC +G + EA+KLF  M      P+   YN +  G+ +   
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535

Query: 506 SYRALRLLGEMNEKGL 521
           + RA++LL EM  +G 
Sbjct: 536 TLRAIQLLEEMLARGF 551



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 191/392 (48%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  F  L+    +    +    +  Q++  G  PNV     LI+  C    +  A  +  
Sbjct: 65  IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 124

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LG      T+T LI GL   G   +    ++KM   G  P++ TY  LI+  C  G
Sbjct: 125 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 184

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
             S   +L   M       +VV Y ++I  LCK+ +V EA  L  QM   GISP++ TY 
Sbjct: 185 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 244

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+   C+  E      L NQ+ ++   P VV ++ ++ A  K G    A ++V  M +R
Sbjct: 245 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P  VTYT L+D      +M++A +++ +M + GF+PDV +Y  LI+G C    + +A
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 364

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M   +  P+   YN +++G C  G    A+ L  EM  +G +P++ +YS  +  
Sbjct: 365 MYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 424

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC++    EA  LL  +    L P + +YNI+
Sbjct: 425 LCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 181/379 (47%), Gaps = 6/379 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A    N+L  M   P++V +  L+    K         L  ++   G+    +T  +
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           LI   C L + G     F    K+   G  P   T+  LI   C EGK+ E   LFD+M 
Sbjct: 106 LINSFCHLNRVGF---AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 NVVTY TLI GLCK      A RLL  M+     P+V+ Y  +ID  C   +  
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 222

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +AF LF+Q+   G SP + TY  L+ A       K  + L+ +M    I P  V ++ ++
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   + +A E+  +M + G  PDV TY  L+ G C++  M EA K+F+ M      
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + Y  +I GYCK     +A+ L  EM  K  +P+  +Y++ +  LC  G+  +A  L
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++M+  G  P +  Y+IL
Sbjct: 403 FHEMVARGQMPDLVTYSIL 421



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 1/348 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y SIID+  K R   +A   F QM+  G+ P   T+ SL+  +   C +       ++ 
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              K+  DV  F  ++   C+ G + +A E+++ + + G  P+VV YT+L+DG C   ++
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  +F  +   G      +YT LI G  K          +E+M      P   TYN L
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++  C+ G++ +   LF EM  R    ++VTY+ L+  LCK   ++EA  LL  ++ + +
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++  YN +IDG C AGE + A  LF+ L S G  PSV TYN++I    K G    A+ 
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           L  EM+    +P   TY  +   F+++++  +A ++   M   GFS D
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 109/207 (52%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN+L      PS+V +  L+ + +K  +      L  +M+  G+ P+  T  IL
Sbjct: 47  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 106

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF   + +  AF + + + K G  PD  T+  LI GLC++G + EA  LF+ M +   
Sbjct: 107 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 166

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V Y  +I G CK GN+  A+RLL  M +    P++  Y+S I  LC+D +  EA  
Sbjct: 167 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 226

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L +QM+  G+ P +  Y  L  A  N+
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNL 253



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+++ + KL+              L  Q+ S G  P+V T N+LI +F        A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + ++ + G  P   T+T LI        + +A  ++  M   GF P+V TYG LI+GLC 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN   A +L  SM +   +P+ V+Y  +I   CK+     A  L  +M  +G+ P+I +
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+S +  LC   +W     LLNQM+   + P V +++ +  A
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 193/365 (52%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD   +G LI G C+ G    AF++L ++E     PN+VIY  +ID  CK+    +A+ L
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           + KI ++G+     TYT LI G  + G   +  +   +M    ++P++YT+N LI  +C 
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +GK+ E   +F+ M  R    ++VT+NTLI G C    V EA +L D +   GI P+V +
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G+C     D+A  LFN+++       +V Y+ LI    K+G    A +L   + 
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G  P+ +TY ILID+F +  D++   E++ LM   G +P V TY +LI+G C    ++
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  L + M    L P+ + YN +  G CK G    A  L   M+  G   ++A+Y+  +
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546

Query: 533 GVLCQ 537
              C+
Sbjct: 547 DAFCK 551



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 225/451 (49%), Gaps = 11/451 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIK------SCSFDKGWLFFSENRCKVELDVY 176
           D A+  F+ +++    P    FN+++  V+K      + S  K  +F       V   ++
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKG-----VTPSIF 120

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +  I I   C  G++  AF VL  + + G+ PN +  T+++ G C NG++++A      +
Sbjct: 121 TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNV 180

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G++  +  Y  LI GL K G   D F+  ++M+   V P++  YN +I  +C +   
Sbjct: 181 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELT 240

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +   L+ ++    +  +++TY +LI G C+  +  E ++L+ +M    I+PNV T+N L
Sbjct: 241 CKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVL 300

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ID FC  G+  +A  +FN +   GQ P +VT+N LI      GN   A  L   + ERGI
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P   +YTILI  + +   +++A  +++ M+      D+  Y  LI GLC  G +  A +
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE 420

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF+++      PN + YN++I  +CK  +    + L   M  KGL P + +Y+  I   C
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +  +  EA  LL+ M    L P    YN L+
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLF 511



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 194/387 (50%), Gaps = 6/387 (1%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A  + N L  M   P+V+ + ++I    K      A  L +++   G+  +  T ++
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            I   C L + G     F     +   G  P+  T   ++   C  G+V +     D + 
Sbjct: 125 WINCYCHLGEMGF---AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVA 181

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  + V Y TLI GLCK  R  +A +LL +M+   + PN++ YN +ID FC    T 
Sbjct: 182 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 241

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KA  L+ ++   G  P ++TY  LIR F + G       L+ EM  + I P+  T+ +LI
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+F R   M +A  M++LM K G  PD+ T+  LI G C+ GN+ EA KLF++++E  + 
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   Y ++I GYCK      A+ L  EM  K +V +I  YSS I  LC+ G+   A  L
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNNIE 574
            + +   G  P+V  YNIL  A   I+
Sbjct: 422 FSTINNDGPPPNVITYNILIDAFCKIQ 448



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 196/418 (46%), Gaps = 9/418 (2%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLL------SKMSSHSHAAAQTLILKIISGRITSS 81
           AFS+     ++G Q    +++ +++ L         M  H + AAQ ++L  +      +
Sbjct: 138 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 197

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
                       QL       V K  +  Y  IID+  K  L+ +A   + +++D G+ P
Sbjct: 198 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDP 257

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVL 198
              T+ SL+    ++  + +      E   K +  +VY+F +LI   C  G + +A  + 
Sbjct: 258 DILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 317

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           N + + G  P++V + +LI G C +G++  A+ LF  + E G++    +YT+LI G  K 
Sbjct: 318 NLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKC 377

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
               +    + +M+   +   +  Y+ LI   C  G++S  ++LF  + +     NV+TY
Sbjct: 378 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 437

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI   CK   +     L   M   G++P V+TYN LI+G+C +    +A  L + ++S
Sbjct: 438 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 497

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              +P  +TYN L     K+G    A +L + M   G      TY +L+D+F ++ D+
Sbjct: 498 KNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 1/190 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I  + K +  D+A+  F++M    +      ++SL+  + KS      W  FS  N
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +V ++ ILI   C+  D++   E+   +   G +P V+ Y  LI+G CK+  I 
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +    L     TY  L  GL K+G   D +E ++ M + G    + TYN L+
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546

Query: 288 HEYCNEGKVS 297
             +C    V+
Sbjct: 547 DAFCKAQDVA 556


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 34/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K  +  +A+ Y  +M++ G  P   T+N++                     
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI--------------------- 299

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                        I G C+   + +A E+L      GF P+ V Y SLI+G C  GD+ER
Sbjct: 300 -------------IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF +    G+      Y  L+ GL   GL     +   +M   G  P + TYN +I+
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G +S+   + ++   +    +V T+NTLI G CK +++  A +L+++M   GI+P
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + ITYN +++G C AG+ ++    F ++   G  P+ +TYN+LI  F ++   + AS ++
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M + G+ P  V++  LI  F R+ D+E A+ ++  +++ G+S    T+  LI     K
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            NM  A K+F+ M       +   Y ++I G CK  N  RA   L EM +KG +P+++++
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 646

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              I  L  + +  +A  +++ M+K+G+ P V
Sbjct: 647 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 212/439 (48%), Gaps = 2/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F QML + V P    FN +L  + K     + G L     +  + ++++++ I I+G CE
Sbjct: 177 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 236

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG L +A  +++ +      P+VV Y +LI G CK    + A    R++   G +    T
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  +I G  K  + ++  E  +     G  P   TY  LI+  C EG V    +LF+E +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  ++V YN+L+ GLC +  +  A +++++M   G  P++ TYN +I+G C  G   
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  + N     G  P V T+N LI  + K      A  LV  M E GI P  +TY  ++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 475

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   ++  + +  E +  M   G  P+  TY +LI   C    M+EASK+   M +  L 
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 535

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V +N +I+G+C+ G+   A  L  ++ EKG      ++++ IG          AE +
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++ML  G +     Y +L
Sbjct: 596 FDEMLSKGHRADSYTYRVL 614



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 211/458 (46%), Gaps = 4/458 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA + +   DQA   + +ML +GV P  +T     I +   C   +  +     R
Sbjct: 91  YNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT---IRLRSFCLTARPHIALRLLR 147

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                   ++  ++ G    G  + A ++ +Q+      PN+  +  ++   CK GD+  
Sbjct: 148 ALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLE 207

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +L  K+ + G+     TY + I GL + G   +     + M+   V P + TYN LI 
Sbjct: 208 AGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIR 266

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C +    E       M ++    +  TYNT+I G CK   VQEA  LL      G  P
Sbjct: 267 GLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 326

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +TY  LI+G C  G+ ++A  LFN+ ++ G  P +V YN L++     G    A  ++
Sbjct: 327 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 386

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM E G  P   TY I+I+   +  ++  A  + +     G+ PDV+T+  LI G C +
Sbjct: 387 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 446

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             +  A +L   MWE  + P+ + YN ++ G CK G          EM  KG  PN  +Y
Sbjct: 447 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 506

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  I   C+  K  EA  ++ +M + GL P    +N L
Sbjct: 507 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  ++    +A   ++A +V  ++   G SP++  +T  +   C       A  L R +
Sbjct: 90  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 149

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G VA    Y  ++CGL+ +G   D  + +++M    V P+L  +N ++H  C  G V
Sbjct: 150 PHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  ++  R ++ N+ TYN  I GLC+  R+ EA RL+D M+   + P+V+TYN L
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 264

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C      +A     ++ + G  P   TYN +I  + K    + A++L+++   +G 
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P +VTY  LI+      D+E+A E+++  Q  G  PD+  Y  L+ GLC++G +  A +
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           + N M E    P+   YN++I G CK GN   A  ++ +   KG +P++ ++++ I   C
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  K   A  L+ +M + G+ P    YN
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYN 472



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 1/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID + K  +  +A       +  G  P   T+ SL+  +      ++    F+E +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+  +  L+KG C  G +  A +V+N++ E G  P++  Y  +I+G CK G+I 
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++       G +    T+  LI G  K        +  E+M   G++P   TYN ++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 475

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GKV+E  + F EM  +    N +TYN LI   C+  +++EA +++ +M   G+ 
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 535

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +++N LI GFC  G+ + A+ LF +L+  G S +  T+N LI AFS   N  MA  +
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G      TY +LID   ++ ++++A+     M K GF P + T+G +I+ L +
Sbjct: 596 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 655

Query: 468 KGNMKEASKLFNSMWETKLEPNDV 491
              + +A  + + M +  + P  V
Sbjct: 656 NHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 183/394 (46%), Gaps = 34/394 (8%)

Query: 206 FSPNVV--IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            SP  +  +Y + I    + G +  A   F ++           Y  ++  L        
Sbjct: 47  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYC-------------------------------N 292
             + Y +M   GVSP L+T+   +  +C                                
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 166

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G   +  +LFD+M H  V  N+  +N ++  LCK   V EA  LL ++   G+S N+ T
Sbjct: 167 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 226

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN  I G C+AG   +A RL + +++    P VVTYN LIR   K    + A   +R M 
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G  P + TY  +ID + +   +++A E+       GF PD  TY  LI+GLC +G+++
Sbjct: 286 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 345

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A +LFN      ++P+ VVYN ++ G C +G    AL+++ EM E+G  P+I +Y+  I
Sbjct: 346 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+ G   +A V++N  +  G  P V  +N L
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 439



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 34/348 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S++       L   AL   ++M + G  P   T+N                      
Sbjct: 365 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN---------------------- 402

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                       I+I G C+ G+++ A  V+N     G+ P+V  + +LIDG CK   ++
Sbjct: 403 ------------IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 450

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E G+     TY  ++ GL K G   +  E +++M L G  P+  TYN LI
Sbjct: 451 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   K+ E  K+  +M    +  + V++NTLI G C+   ++ A  L  +++  G S
Sbjct: 511 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 570

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N LI  F        A ++F+++ S G      TY VLI    K  N   A   
Sbjct: 571 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 630

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           + EM ++G  PS  T+  +I+S   +  + +A  +  +M K G  P+V
Sbjct: 631 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 35/253 (13%)

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT--YNVLIRAFSKAGNSKMASDL 407
           V  Y  LI     AG  D         +S   SP+ +   Y   IRA+++AG  + A D 
Sbjct: 17  VPAYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDA 75

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M+     P+   Y  ++D+ V +   ++A ++Y  M  +G SPD++T+ + +   C+
Sbjct: 76  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 135

Query: 468 -------------------------------KGNMKEASKLFNSMWETKLEPNDVVYNMM 496
                                           G+  +A +LF+ M  T + PN   +N +
Sbjct: 136 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 195

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   CK G+   A  LLG++ ++G+  N+ +Y+  I  LC+ G+ PEA  L++ M    +
Sbjct: 196 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV 255

Query: 557 KPSVSLYNILYRA 569
            P V  YN L R 
Sbjct: 256 -PDVVTYNTLIRG 267


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 225/445 (50%), Gaps = 9/445 (2%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVY----SFGILIKGC 185
           HQ+   G+ P   TFN   I V   C   +    FS     ++L  +    +F  LI G 
Sbjct: 83  HQLELKGITPTIVTFN---ILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGI 139

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G L +A    + +  +GF  + V Y +LI+G CK G+   A  + +KI E  LV T 
Sbjct: 140 CLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI-EGKLVNTD 198

Query: 246 HT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              Y ++I  L K+    D ++ Y +M    +SP + T+N LI  +C  G++ E F LF 
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM  + +  +V T++ L+  LCK+  +  A+ +L  M   G+ P+V+TY+ L+DG+C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           E +KA  +F+ +   G +P   +YN++I    K      A  L +EM  +GI P  VTY 
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID   +   +  A+++   M  +G   D+ TY  LI  LC   ++ +A  L   + + 
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            ++P+   YN++I G CK G    A  +  ++  KG   N  +Y+  I  LC++G + EA
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
           EVLL++M   G+ P    Y  + RA
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRA 523



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 207/373 (55%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  + +QLE  G +P +V +  L++  C  G++  A  +F KI +LG   T  T+  LI 
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G+  NG  K+   F++ +   G      +Y  LI+  C  G+     ++  ++  + V  
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNT 197

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VV YN +I  LCK+  V +A +L  +M    ISP+V+T+N LI GFC  G+  +AF LF
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++     +P V T+++L+ A  K GN   A +++  M ++G+ P  VTY+ L+D +   
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           +++ KA  ++S M + G +P  ++Y ++I+GL     + EA  LF  M    + P+ V Y
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G CK G    A +L+ EM+  G+  +I +Y+S I VLC++    +A  L+ ++  
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437

Query: 554 LGLKPSVSLYNIL 566
            G++PS+  YNIL
Sbjct: 438 QGIQPSMYTYNIL 450



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 1/337 (0%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           T   +Y  II++  K +    A   + +M+   + P   TFNSL++         + +  
Sbjct: 197 TDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGL 256

Query: 164 FSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F E   K +  DVY+F IL+   C+ G++ +A  +L  + + G  P+VV Y+SL+DG C 
Sbjct: 257 FHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCL 316

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             ++ +AK +F  +  LG+    H+Y ++I GL K  +  +    +++M   G++P   T
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVT 376

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI   C  G++S  ++L DEM +  +  +++TYN+LI  LCK   + +A  L+ ++K
Sbjct: 377 YNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIK 436

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             GI P++ TYN LIDG C  G    A  +F  L   G S +  TYN++I    K G   
Sbjct: 437 DQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFN 496

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
            A  L+ +ME  GI P  VTY  +I +  R D+ EKA
Sbjct: 497 EAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 188/352 (53%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  DV  + I+I   C+   ++ A+++ +++     SP+VV + SLI G C  G ++ A 
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++    +    +T+++L+  L K+G           M   GV P + TY+ L+  Y
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +V++   +F  M    VA +  +YN +I GL K   V EA  L  +M   GI+P+ 
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LIDG C  G    A++L +++ +NG    ++TYN LI    K  +   A  LV++
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++GI PS  TY ILID   +   ++ A +++  +   G+S + +TY ++I+GLC +G 
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             EA  L + M    + P+ V Y  +I    ++  + +A +LL EM  +GL+
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 149/292 (51%), Gaps = 2/292 (0%)

Query: 277 SPSLYTYNCLIHEY--CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           +PS+  +N ++      N    +    L  ++  + +   +VT+N L+   C    +  A
Sbjct: 54  TPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             +  ++   G  P  IT+N LI+G C  G+  +A    + + + G     V+Y  LI  
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K G ++ A  +++++E + +    V Y I+I+S  +   +  A+++YS M     SPD
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD 233

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+  LI G C+ G +KEA  LF+ M    + P+   +++++   CK+GN  RA  +L 
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLA 293

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            M ++G++P++ +YSS +   C   +  +A+ + + M +LG+ P    YNI+
Sbjct: 294 VMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 1/139 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K+   D+A+    ++ D G++P   T+N L+  + K          F +  
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   ++ +++ I+I G C+ G  N+A  +L+++E  G  P+ V Y ++I    +  + E
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531

Query: 228 RAKMLFRKIGELGLVATQH 246
           +A+ L R++   GL+  +H
Sbjct: 532 KAEKLLREMIIRGLLLCKH 550


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 34/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K  +  +A+ Y  +M++ G  P   T+N++                     
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI--------------------- 297

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                        I G C+   + +A E+L      GF P+ V Y SLI+G C  GD+ER
Sbjct: 298 -------------IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 344

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF +    G+      Y  L+ GL   GL     +   +M   G  P + TYN +I+
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G +S+   + ++   +    +V T+NTLI G CK +++  A +L+++M   GI+P
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + ITYN +++G C AG+ ++    F ++   G  P+ +TYN+LI  F ++   + AS ++
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M + G+ P  V++  LI  F R+ D+E A+ ++  +++ G+S    T+  LI     K
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            NM  A K+F+ M       +   Y ++I G CK  N  RA   L EM +KG +P+++++
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              I  L  + +  +A  +++ M+K+G+ P V
Sbjct: 645 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 212/439 (48%), Gaps = 2/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F QML + V P    FN +L  + K     + G L     +  + ++++++ I I+G CE
Sbjct: 175 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 234

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG L +A  +++ +      P+VV Y +LI G CK    + A    R++   G +    T
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  +I G  K  + ++  E  +     G  P   TY  LI+  C EG V    +LF+E +
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  ++V YN+L+ GLC +  +  A +++++M   G  P++ TYN +I+G C  G   
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  + N     G  P V T+N LI  + K      A  LV  M E GI P  +TY  ++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   ++  + +  E +  M   G  P+  TY +LI   C    M+EASK+   M +  L 
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 533

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V +N +I+G+C+ G+   A  L  ++ EKG      ++++ IG          AE +
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++ML  G +     Y +L
Sbjct: 594 FDEMLSKGHRADSYTYRVL 612



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 211/458 (46%), Gaps = 4/458 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA + +   DQA   + +ML +GV P  +T     I +   C   +  +     R
Sbjct: 89  YNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT---IRLRSFCLTARPHIALRLLR 145

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                   ++  ++ G    G  + A ++ +Q+      PN+  +  ++   CK GD+  
Sbjct: 146 ALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLE 205

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +L  K+ + G+     TY + I GL + G   +     + M+   V P + TYN LI 
Sbjct: 206 AGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIR 264

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C +    E       M ++    +  TYNT+I G CK   VQEA  LL      G  P
Sbjct: 265 GLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 324

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +TY  LI+G C  G+ ++A  LFN+ ++ G  P +V YN L++     G    A  ++
Sbjct: 325 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 384

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM E G  P   TY I+I+   +  ++  A  + +     G+ PDV+T+  LI G C +
Sbjct: 385 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 444

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             +  A +L   MWE  + P+ + YN ++ G CK G          EM  KG  PN  +Y
Sbjct: 445 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 504

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  I   C+  K  EA  ++ +M + GL P    +N L
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  ++    +A   ++A +V  ++   G SP++  +T  +   C       A  L R +
Sbjct: 88  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 147

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G VA    Y  ++CGL+ +G   D  + +++M    V P+L  +N ++H  C  G V
Sbjct: 148 PHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  ++  R ++ N+ TYN  I GLC+  R+ EA RL+D M+   + P+V+TYN L
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 262

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C      +A     ++ + G  P   TYN +I  + K    + A++L+++   +G 
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 322

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P +VTY  LI+      D+E+A E+++  Q  G  PD+  Y  L+ GLC++G +  A +
Sbjct: 323 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 382

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           + N M E    P+   YN++I G CK GN   A  ++ +   KG +P++ ++++ I   C
Sbjct: 383 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 442

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  K   A  L+ +M + G+ P    YN
Sbjct: 443 KRLKLDSALQLVERMWEYGIAPDTITYN 470



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 1/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID + K  +  +A       +  G  P   T+ SL+  +      ++    F+E +
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+  +  L+KG C  G +  A +V+N++ E G  P++  Y  +I+G CK G+I 
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++       G +    T+  LI G  K        +  E+M   G++P   TYN ++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GKV+E  + F EM  +    N +TYN LI   C+  +++EA +++ +M   G+ 
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 533

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +++N LI GFC  G+ + A+ LF +L+  G S +  T+N LI AFS   N  MA  +
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G      TY +LID   ++ ++++A+     M K GF P + T+G +I+ L +
Sbjct: 594 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 653

Query: 468 KGNMKEASKLFNSMWETKLEPNDV 491
              + +A  + + M +  + P  V
Sbjct: 654 NHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 183/394 (46%), Gaps = 34/394 (8%)

Query: 206 FSPNVV--IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            SP  +  +Y + I    + G +  A   F ++           Y  ++  L        
Sbjct: 45  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYC-------------------------------N 292
             + Y +M   GVSP L+T+   +  +C                                
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 164

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G   +  +LFD+M H  V  N+  +N ++  LCK   V EA  LL ++   G+S N+ T
Sbjct: 165 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 224

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN  I G C+AG   +A RL + +++    P VVTYN LIR   K    + A   +R M 
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G  P + TY  +ID + +   +++A E+       GF PD  TY  LI+GLC +G+++
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A +LFN      ++P+ VVYN ++ G C +G    AL+++ EM E+G  P+I +Y+  I
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+ G   +A V++N  +  G  P V  +N L
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 437



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 34/348 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S++       L   AL   ++M + G  P   T+N                      
Sbjct: 363 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN---------------------- 400

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                       I+I G C+ G+++ A  V+N     G+ P+V  + +LIDG CK   ++
Sbjct: 401 ------------IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 448

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E G+     TY  ++ GL K G   +  E +++M L G  P+  TYN LI
Sbjct: 449 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   K+ E  K+  +M    +  + V++NTLI G C+   ++ A  L  +++  G S
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 568

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N LI  F        A ++F+++ S G      TY VLI    K  N   A   
Sbjct: 569 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 628

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           + EM ++G  PS  T+  +I+S   +  + +A  +  +M K G  P+V
Sbjct: 629 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 35/253 (13%)

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT--YNVLIRAFSKAGNSKMASDL 407
           V  Y  LI     AG  D         +S   SP+ +   Y   IRA+++AG  + A D 
Sbjct: 15  VPAYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDA 73

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M+     P+   Y  ++D+ V +   ++A ++Y  M  +G SPD++T+ + +   C+
Sbjct: 74  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 133

Query: 468 -------------------------------KGNMKEASKLFNSMWETKLEPNDVVYNMM 496
                                           G+  +A +LF+ M  T + PN   +N +
Sbjct: 134 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 193

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   CK G+   A  LLG++ ++G+  N+ +Y+  I  LC+ G+ PEA  L++ M    +
Sbjct: 194 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV 253

Query: 557 KPSVSLYNILYRA 569
            P V  YN L R 
Sbjct: 254 -PDVVTYNTLIRG 265


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 232/466 (49%), Gaps = 6/466 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S +Y+++I A  ++    +AL     M      P   TFN ++  + ++    +   
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  +    D  ++G L+ G C  G +++A  +LN++     +PN V+Y +LI G  
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYV 352

Query: 222 KNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +G  E AK +L+  +   G     +T+ ++I GL K G      E   +M      P++
Sbjct: 353 ASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNV 412

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI+ +C +G++ E  ++ + M  + ++ N V YN LIC LCK+  ++EA +L  +
Sbjct: 413 ITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGE 472

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI+G C   + ++A  L++ +   G   + VTYN L+ AF    +
Sbjct: 473 MSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDS 532

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV EM  RG     +TY  LI +  ++  +EK   ++  M   G  P + +  +
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC  G + +A K    M    L P+ V YN +I G CK G+   A  L  ++  +G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + P+  +Y++ I   C +G + +A +LL + +  G  P+   ++IL
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSIL 698



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/562 (28%), Positives = 258/562 (45%), Gaps = 21/562 (3%)

Query: 10  QALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTL 69
           +   L  + R   L P+  F L            P S+ +  R    K  SH+  A   L
Sbjct: 48  KPFDLKQLRRSLSLTPISPFQLCKLLELP--LDIPTSMELFQRAGAQKGYSHTFDACYLL 105

Query: 70  ILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           I K+  G +       + L     Q+       + K  L+  I+  + K+ L  QA    
Sbjct: 106 IDKL--GAVGDFKVIEKLL----KQM--KDEGLLFKESLFILIMKHYGKAGLPGQATRLL 157

Query: 130 HQMLDSGVRPRSNTFNS----LLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGC 185
             M   GV     TF S    L I V   C      +F+      V   VY+FG+++K  
Sbjct: 158 LDMW--GVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKAL 215

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C   +++ A  +L  + + G  PN VIY +LI   C+N  +  A  L   +  +      
Sbjct: 216 CMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDV 275

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+  +I GL + G   +  +  ++M L G S    TY  L+H  C  G+V E   L ++
Sbjct: 276 QTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK 335

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLL-DQMKMAGISPNVITYNKLIDGFCDAG 364
           + +     N V YNTLI G     R +EA+ LL + M +AG  P+  T+N +IDG    G
Sbjct: 336 IPNP----NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG 391

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
               A  L N++ +    P+V+TY +LI  F K G  + A+++V  M  +G++ + V Y 
Sbjct: 392 YLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYN 451

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LI +  +  ++E+A +++  M   G  PD+YT+  LI+GLC    M+EA  L++ M+  
Sbjct: 452 CLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE 511

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            +  N V YN ++  +    +  +A +L+ EM  +G   +  +Y+  I  LC+ G   + 
Sbjct: 512 GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             L  +ML  G+ P++   NIL
Sbjct: 572 LGLFEEMLGKGIFPTIISCNIL 593



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 187/368 (50%), Gaps = 2/368 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
           +L+    P +  +N+L+   + S  F+  K  L+ +      E D Y+F I+I G  + G
Sbjct: 332 LLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG 391

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L  A E+LN++    F PNV+ YT LI+G CK G +E A  +   +   GL      Y 
Sbjct: 392 YLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYN 451

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LIC L K+G  ++  + + +M   G  P +YT+N LI+  C   K+ E   L+ +M   
Sbjct: 452 CLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE 511

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  N VTYNTL+        +Q+A +L+D+M   G   + ITYN LI   C  G  +K 
Sbjct: 512 GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++   G  P++++ N+LI    + G    A   +++M  RG+TP  VTY  LI+ 
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   +++A  +++ +Q  G  PD  TY  LI   C +G   +A  L     ++   PN
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691

Query: 490 DVVYNMMI 497
           +V ++++I
Sbjct: 692 EVTWSILI 699



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 185/360 (51%), Gaps = 9/360 (2%)

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V+   L+DG C       A  +F  +   G+  T +T+ V++  L               
Sbjct: 175 VVLDILVDGDCP----RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRD 230

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  +G  P+   Y  LIH  C   +VSE  +L ++M       +V T+N +I GLC+  R
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           + EA +LLD+M + G S + +TY  L+ G C  G+ D+A  L N++ +    P+ V YN 
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNT 346

Query: 391 LIRAFSKAGNSKMASDLV-REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           LI  +  +G  + A DL+   M   G  P   T+ I+ID  V+   +  A E+ + M   
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
            F P+V TY +LI+G C +G ++EA+++ NSM    L  N V YN +I   CK+GN   A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L+L GEM+ KG  P+I +++S I  LC++ K  EA  L + M   G+  +   YN L  A
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 9/391 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL+ G C     N  +++L++    G SP V  +  ++   C   +++ A  L R + + 
Sbjct: 179 ILVDGDCPRVAPNVFYDMLSR----GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH 234

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L +N    +  +  E M L    P + T+N +IH  C  G++ E 
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEA 294

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R  + + +TY  L+ GLC+  +V EA  LL+++     +PN + YN LI G
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISG 350

Query: 360 FCDAGETDKAFRL-FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +  +G  ++A  L +N +   G  P   T+N++I    K G    A +L+ EM  +   P
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TYTILI+ F +   +E+A E+ + M   G S +   Y  LI  LC  GN++EA +LF
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M     +P+   +N +I G CK      AL L  +M  +G++ N  +Y++ +      
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               +A  L+++ML  G       YN L +A
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 197/414 (47%), Gaps = 45/414 (10%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSL---LCHLTQLFPSSS----NPVTKSRLYESIIDA 115
           H AA+ L   ++ G  ++ + T   L   LC + Q+  + +     P   + LY ++I  
Sbjct: 292 HEAAKLLDRMLLRG-FSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISG 350

Query: 116 HLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
           ++ S R  +     ++ M+ +G  P + TFN ++  ++K           +E   K  E 
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V ++ ILI G C+ G L +A E++N +   G S N V Y  LI   CK+G+IE A  LF
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY--- 290
            ++   G     +T+  LI GL KN   ++    Y  M L GV  +  TYN L+H +   
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530

Query: 291 --------------------------------CNEGKVSEGFKLFDEMRHREVACNVVTY 318
                                           C  G V +G  LF+EM  + +   +++ 
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI GLC+  +V +A + L  M   G++P+++TYN LI+G C  G   +A  LFN+L+S
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            G  P  +TYN LI      G    A  L+ +  + G  P+EVT++ILI+  V+
Sbjct: 651 EGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 235/480 (48%), Gaps = 7/480 (1%)

Query: 101 NP---VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           NP   VT + L E ++     +++  +A+  F+Q+     +P +  +NS++I ++    +
Sbjct: 152 NPICVVTPTELSE-VVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQY 210

Query: 158 DKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
            K    ++E   +     D  ++  LI   C+ G  + A ++LN+++E G  P   IYT 
Sbjct: 211 GKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTM 270

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI    K  D+  A  LF ++          TYT LI GL K G   + + F+ +MQ  G
Sbjct: 271 LITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREG 330

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEA 334
             P     N +I+     G++ +  KLF EM       +VVTYNT+I  L + + R  E 
Sbjct: 331 CRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEV 390

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
               ++MK +GISP+  TY+ LIDGFC     +KA  L  ++   G  P    Y  LI A
Sbjct: 391 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             KA    +A +L +E++E   + S   Y ++I    ++  ++ A  M+  M K G +PD
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 510

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           VY Y  L+ GL   G + EA      M E    P+   YN+++ G  K G  +RA+ +L 
Sbjct: 511 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            M +  + P++ SY++ +G L   G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 571 NMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVD 630



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 194/401 (48%), Gaps = 2/401 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I A  K    D A    ++M ++G++P +  +  L+    K          F E R
Sbjct: 233 YSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +    DV+++  LI+G  +AG +++A+    +++  G  P+ V+  ++I+   K G ++
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF-EFYEKMQLNGVSPSLYTYNCL 286
            A  LF+++G L  + +  TY  +I  LF++  +      ++E+M+ +G+SPS +TY+ L
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +C   ++ +   L +EM  +        Y +LI  L K  R   A  L  ++K    
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           S +   Y  +I     AG  D A  +F+++   G +P V  YN L+   ++ G    A  
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 532

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +R M+E G  P   +Y I+++   ++    +A EM S M++S   PDV +Y  ++  L 
Sbjct: 533 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALS 592

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  +EA+KL   M     E + + Y+ ++    K  + Y
Sbjct: 593 HAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEY 633


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 34/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K  +  +A+ Y  +M++ G  P   T+N++                     
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI--------------------- 296

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                        I G C+   + +A E+L      GF P+ V Y SLI+G C  GD+ER
Sbjct: 297 -------------IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 343

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF +    G+      Y  L+ GL   GL     +   +M   G  P + TYN +I+
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G +S+   + ++   +    +V T+NTLI G CK +++  A +L+++M   GI+P
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + ITYN +++G C AG+ ++    F ++   G  P+ +TYN+LI  F ++   + AS ++
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M + G+ P  V++  LI  F R+ D+E A+ ++  +++ G+S    T+  LI     K
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            NM  A K+F+ M       +   Y ++I G CK  N  RA   L EM +KG +P+++++
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              I  L  + +  +A  +++ M+K+G+ P V
Sbjct: 644 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 212/439 (48%), Gaps = 2/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F QML + V P    FN +L  + K     + G L     +  + ++++++ I I+G CE
Sbjct: 174 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 233

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG L +A  +++ +      P+VV Y +LI G CK    + A    R++   G +    T
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  +I G  K  + ++  E  +     G  P   TY  LI+  C EG V    +LF+E +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + +  ++V YN+L+ GLC +  +  A +++++M   G  P++ TYN +I+G C  G   
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  + N     G  P V T+N LI  + K      A  LV  M E GI P  +TY  ++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   ++  + +  E +  M   G  P+  TY +LI   C    M+EASK+   M +  L 
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 532

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V +N +I+G+C+ G+   A  L  ++ EKG      ++++ IG          AE +
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++ML  G +     Y +L
Sbjct: 593 FDEMLSKGHRADSYTYRVL 611



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 211/458 (46%), Gaps = 4/458 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA + +   DQA   + +ML +GV P  +T     I +   C   +  +     R
Sbjct: 88  YNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT---IRLRSFCLTARPHIALRLLR 144

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                   ++  ++ G    G  + A ++ +Q+      PN+  +  ++   CK GD+  
Sbjct: 145 ALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLE 204

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +L  K+ + G+     TY + I GL + G   +     + M+   V P + TYN LI 
Sbjct: 205 AGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIR 263

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C +    E       M ++    +  TYNT+I G CK   VQEA  LL      G  P
Sbjct: 264 GLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 323

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + +TY  LI+G C  G+ ++A  LFN+ ++ G  P +V YN L++     G    A  ++
Sbjct: 324 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 383

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM E G  P   TY I+I+   +  ++  A  + +     G+ PDV+T+  LI G C +
Sbjct: 384 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 443

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             +  A +L   MWE  + P+ + YN ++ G CK G          EM  KG  PN  +Y
Sbjct: 444 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 503

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  I   C+  K  EA  ++ +M + GL P    +N L
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 198/388 (51%), Gaps = 5/388 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  ++    +A   ++A +V  ++   G SP++  +T  +   C       A  L R +
Sbjct: 87  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 146

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G VA    Y  ++CGL+ +G   D  + +++M    V P+L  +N ++H  C  G V
Sbjct: 147 PHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  ++  R ++ N+ TYN  I GLC+  R+ EA RL+D M+   + P+V+TYN L
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 261

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C      +A     ++ + G  P   TYN +I  + K    + A++L+++   +G 
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 321

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P +VTY  LI+      D+E+A E+++  Q  G  PD+  Y  L+ GLC++G +  A +
Sbjct: 322 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 381

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           + N M E    P+   YN++I G CK GN   A  ++ +   KG +P++ ++++ I   C
Sbjct: 382 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 441

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  K   A  L+ +M + G+ P    YN
Sbjct: 442 KRLKLDSALQLVERMWEYGIAPDTITYN 469



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 1/384 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID + K  +  +A       +  G  P   T+ SL+  +      ++    F+E +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ D+  +  L+KG C  G +  A +V+N++ E G  P++  Y  +I+G CK G+I 
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++       G +    T+  LI G  K        +  E+M   G++P   TYN ++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GKV+E  + F EM  +    N +TYN LI   C+  +++EA +++ +M   G+ 
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 532

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +++N LI GFC  G+ + A+ LF +L+  G S +  T+N LI AFS   N  MA  +
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +G      TY +LID   ++ ++++A+     M K GF P + T+G +I+ L +
Sbjct: 593 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 652

Query: 468 KGNMKEASKLFNSMWETKLEPNDV 491
              + +A  + + M +  + P  V
Sbjct: 653 NHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 183/394 (46%), Gaps = 34/394 (8%)

Query: 206 FSPNVV--IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            SP  +  +Y + I    + G +  A   F ++           Y  ++  L        
Sbjct: 44  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYC-------------------------------N 292
             + Y +M   GVSP L+T+   +  +C                                
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 163

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G   +  +LFD+M H  V  N+  +N ++  LCK   V EA  LL ++   G+S N+ T
Sbjct: 164 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 223

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN  I G C+AG   +A RL + +++    P VVTYN LIR   K    + A   +R M 
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G  P + TY  +ID + +   +++A E+       GF PD  TY  LI+GLC +G+++
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A +LFN      ++P+ VVYN ++ G C +G    AL+++ EM E+G  P+I +Y+  I
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             LC+ G   +A V++N  +  G  P V  +N L
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 436



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 34/348 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S++       L   AL   ++M + G  P   T+N                      
Sbjct: 362 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN---------------------- 399

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                       I+I G C+ G+++ A  V+N     G+ P+V  + +LIDG CK   ++
Sbjct: 400 ------------IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 447

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ E G+     TY  ++ GL K G   +  E +++M L G  P+  TYN LI
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   K+ E  K+  +M    +  + V++NTLI G C+   ++ A  L  +++  G S
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N LI  F        A ++F+++ S G      TY VLI    K  N   A   
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           + EM ++G  PS  T+  +I+S   +  + +A  +  +M K G  P+V
Sbjct: 628 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 35/253 (13%)

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT--YNVLIRAFSKAGNSKMASDL 407
           V  Y  LI     AG  D         +S   SP+ +   Y   IRA+++AG  + A D 
Sbjct: 14  VPAYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDA 72

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M+     P+   Y  ++D+ V +   ++A ++Y  M  +G SPD++T+ + +   C+
Sbjct: 73  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 132

Query: 468 -------------------------------KGNMKEASKLFNSMWETKLEPNDVVYNMM 496
                                           G+  +A +LF+ M  T + PN   +N +
Sbjct: 133 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 192

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   CK G+   A  LLG++ ++G+  N+ +Y+  I  LC+ G+ PEA  L++ M    +
Sbjct: 193 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV 252

Query: 557 KPSVSLYNILYRA 569
            P V  YN L R 
Sbjct: 253 -PDVVTYNTLIRG 264


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 228/456 (50%), Gaps = 5/456 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT--FNSLLIFVIKSCSFDKGWLFFSENR 168
           SI+   LK+  ++    ++ +M+ +G    +NT     L+     S    +G+   ++  
Sbjct: 196 SILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQ-F 254

Query: 169 CKVELDV--YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K  LD    ++  LI G C+A +     EVL+ +      P +  Y  +I+G CKN + 
Sbjct: 255 LKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEEC 314

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + G    +  YT +I GL + G   +  + + +M   G+ P+ YTYN +
Sbjct: 315 LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTM 374

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H     G      +L++EM ++      VT N +I  LC   +  EA  +  +M   GI
Sbjct: 375 LHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGI 434

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             + ITYN LI GFC  G+ D+   L N+L +    PSV  Y +LI    K G+ + A  
Sbjct: 435 QADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKR 494

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ +M  +G+ P+  TY  ++   ++S D E   E+Y+     G+     T   +I  LC
Sbjct: 495 LLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELC 554

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G   EAS++F  M ET ++ + + YN +I G+CKEG   +++ LL E+  +GL P+ +
Sbjct: 555 SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSAS 614

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           SY+S I  LCQ+G    A+ L   M+  G++P  +L
Sbjct: 615 SYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANL 650



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 217/439 (49%), Gaps = 1/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
            +Q L +G+ P + T+N L+    ++ ++            +  L  +Y++  +I G C+
Sbjct: 251 LNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCK 310

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             +  +A+ V N L++ G++P+ V+YT++I G C+ G    A+ L+ ++ + G+    +T
Sbjct: 311 NEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYT 370

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  ++ G  K+G  +   E Y +M   G   +  T N +I E C+ GK  E F++F +M 
Sbjct: 371 YNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMS 430

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  + +TYN+LI G CKE +V E   LL+++      P+V  Y  LI   C  G+ +
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFE 490

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A RL   + S G  P+  TY+ ++    K+G+ +   +L  E   +G   +  T   +I
Sbjct: 491 AAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKII 550

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                    ++A EM+  M ++G   D  TY  LI G C +G + ++  L N +    L+
Sbjct: 551 SELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQ 610

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   Y  +I   C+ G++  A RL G+M  KG+ P+       I  LC+ G+  E    
Sbjct: 611 PSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDR 670

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L  ML+  +KP  + +  L
Sbjct: 671 LMGMLENKIKPKKAAFEDL 689



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF P+       +   C  G IE A  ++ ++ E G+  +      ++ G  K G  +  
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 265 FEFYEKMQLNGVS--PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           FEFY++M   G +   +  T  CLI  +C+ G+V+ G++L ++     +     TYN LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C+         +L  M      P + TY ++I+G C   E  +A+R+FN LK  G +
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  V Y  +I    + G+   A  L  EM ++G+ P+  TY  ++   ++S D E+A E+
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           Y+ M   G+     T   +I  LC +G   EA ++F  M ET ++ + + YN +I G+CK
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           EG     + LL E+  +   P+++ Y   I   C+DG +  A+ LL  M   GL P+   
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510

Query: 563 YNIL 566
           Y+ +
Sbjct: 511 YDTM 514



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 173/364 (47%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D   +  +I G CE G   +A ++  ++ + G  PN   Y +++ G  K+GD ERA  L+
Sbjct: 332 DRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELY 391

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G   T  T   +I  L   G   + FE ++KM   G+     TYN LI  +C E
Sbjct: 392 NEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKE 451

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKV E   L +E+  ++   +V  Y  LI   CK+   + A+RLL  M   G+ PN  TY
Sbjct: 452 GKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTY 511

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + ++ G   +G+ +    L+N+  + G   +  T N +I      G S  AS++ ++M E
Sbjct: 512 DTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSE 571

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            GI    +TY  LI  F +   + K+  + + +   G  P   +Y  LI  LC  G+ + 
Sbjct: 572 TGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAES 631

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L+  M    +EP+  +   +I G CK+G +   +  L  M E  + P  A++     
Sbjct: 632 AKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691

Query: 534 VLCQ 537
            L Q
Sbjct: 692 CLIQ 695



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 193/433 (44%), Gaps = 37/433 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  S    +K  C  G + +A EV  QL+E G   ++V   S++ GC K G  E     +
Sbjct: 155 DSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFY 214

Query: 234 RKIGELGLVATQHTYTV--LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +++ + G  +  +T TV  LI     +G    G+E   +    G+ P   TYN LI  +C
Sbjct: 215 QEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFC 274

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
                +   ++   M  R     + TY  +I GLCK     EA R+ + +K  G +P+ +
Sbjct: 275 QAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRV 334

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  +I G C+ G   +A +L+ ++   G  P+  TYN ++    K+G+ + A +L  EM
Sbjct: 335 MYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEM 394

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +G   + VT   +I         ++AFE++  M ++G   D  TY  LI G C +G +
Sbjct: 395 CNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKV 454

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS- 530
            E   L N +     +P+  +Y ++I   CK+G+   A RLLG+M+ KGL PN  +Y + 
Sbjct: 455 DERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTM 514

Query: 531 ----------------------------------TIGVLCQDGKWPEAEVLLNQMLKLGL 556
                                              I  LC  GK  EA  +  +M + G+
Sbjct: 515 LHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGI 574

Query: 557 KPSVSLYNILYRA 569
           K     YN L R 
Sbjct: 575 KADAITYNSLIRG 587



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 1/327 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +++   LKS   ++A   +++M + G    + T N ++  +      D+ +  F + +
Sbjct: 371 YNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMS 430

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ D  ++  LI+G C+ G +++   +LN+L      P+V +Y  LI   CK+GD E
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFE 490

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK L   +   GL    +TY  ++ G  K+G  +   E Y +    G   +  T N +I
Sbjct: 491 AAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKII 550

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
            E C+ GK  E  ++F +M    +  + +TYN+LI G CKE +V ++  LL+++   G+ 
Sbjct: 551 SELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQ 610

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  +Y  LI   C  G+ + A RL+  + S G  P       LI    K G +    D 
Sbjct: 611 PSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDR 670

Query: 408 VREMEERGITPSEVTYTILIDSFVRSD 434
           +  M E  I P +  +  L +  ++S+
Sbjct: 671 LMGMLENKIKPKKAAFEDLAECLIQSE 697



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 5/253 (1%)

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           ++ N L   L     V+ A+ + D   +AG  P+  +  + +   C  G  ++A  ++ Q
Sbjct: 125 ISSNMLFEALLDAKAVRAAKMVRD---IAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQ 181

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI--LIDSFVRS 433
           LK  G   S+V  N ++    KAG +++  +  +EM + G      T T+  LI +F  S
Sbjct: 182 LKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDS 241

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             + + +E+ +   K+G  P   TY  LI G C   N    S++ ++M      P    Y
Sbjct: 242 GQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTY 301

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I G CK      A R+  ++ ++G  P+   Y++ I  LC+ G + EA  L  +M+ 
Sbjct: 302 QEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMD 361

Query: 554 LGLKPSVSLYNIL 566
            G++P+   YN +
Sbjct: 362 KGMQPNAYTYNTM 374


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 199/379 (52%), Gaps = 1/379 (0%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           L    +GILI   C+ G+ ++A+++L+ +    F    + Y+++I+  CK   +E A+ L
Sbjct: 43  LRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL 102

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             K+          TY  ++  L K     D     E+M   G+ P  + YN ++   C 
Sbjct: 103 IEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ 161

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           E KV E   LF++M  + +  NVVTYNTLI GLCK  R++ A  L  +M   G  P  ++
Sbjct: 162 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 221

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LIDGFC   +   A  +F+++  +   P+VVTY  LI   SK+G  + A++++  M 
Sbjct: 222 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 281

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ++G+TP+  TY+ LID F +   +++A ++   M   G +P V TY +L++ LC    ++
Sbjct: 282 KKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 341

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A KLF  M + +  P  V YN ++   C       A RL  EM  KG  P+  +Y +  
Sbjct: 342 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLA 401

Query: 533 GVLCQDGKWPEAEVLLNQM 551
             L + GK  EA+ L+ +M
Sbjct: 402 WGLTRAGKVHEAQELMEKM 420



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 183/366 (50%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           D+A    H M     + ++  +++++ ++ K    ++      +       D  ++G ++
Sbjct: 62  DEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIV 121

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           +  C+   ++ A   + ++   G  P+  IY  ++ G C+   +E A++LF K+ +  + 
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TY  LI GL K    +  +E +++M   G  P+  +YN LI  +C +  +     +
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FD+M       NVVTY TLI GL K  +VQ A  +LD M   G++PNV TY+ LIDGFC 
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
               D+A +L  Q+ + G +P+VVTYN+L+ +  +A   + A  L R M +R   P+ VT
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  L+ +      ++ A  +Y+ M   G  PD  TY  L  GL   G + EA +L   M 
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421

Query: 483 ETKLEP 488
            TK  P
Sbjct: 422 LTKRNP 427



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 182/390 (46%), Gaps = 1/390 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  +  G  +AG L +  EV   + E G++     Y  LI   CK G+ + A  L   +
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                      Y+ +I  L K    ++  E  EKM      P   TY  ++   C   ++
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCKTKRI 130

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +     +EM  R +  +   YN ++ GLC+E +V+EA  L ++M    I+PNV+TYN L
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+G C A   + A+ LF ++   G  P+ V+YN LI  F K  +   A D+  +M     
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ VTYT LID   +S  ++ A E+   M K G +P+V TY  LI G C    + EA K
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   M    + P  V YN+++   C+      A +L   M ++   P + +Y++ +  LC
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +   A  L  +M+  G  P    Y+ L
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 184/362 (50%), Gaps = 1/362 (0%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P    + ++ DG  K G +E+ K +++ + E G       Y +LI  L K G   + ++ 
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
              M+L         Y+ +I+  C   +V E  +L ++M  R    + +TY  ++  LCK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             R+ +A   +++M   GI P+   YN ++ G C   + ++A  LF ++     +P+VVT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN LI    KA   + A +L +EM  +G  P+EV+Y  LID F +  D+  A +++  M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           +S   P+V TY  LI GL   G ++ A+++ + M +  + PN   Y+ +I G+CK     
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A +LL +M  +G+ P + +Y+  +  LC+  K  +A  L   M +    P+V  YN L 
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 568 RA 569
           RA
Sbjct: 367 RA 368



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 34/305 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  ++    +    ++A   F +M+   + P   T+N+                     
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT--------------------- 189

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                        LI G C+A  +  A+E+  ++   G+ P  V Y +LIDG CK  D+ 
Sbjct: 190 -------------LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F K+     V    TYT LI GL K+G  +   E  + M   GV+P++ TY+CLI
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 296

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   +V E  KL ++M  + +A  VVTYN L+  LC+  ++++A +L   M      
Sbjct: 297 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 356

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P V+TYN L+   C   + D A RL+ ++ + G  P  +TY+ L    ++AG    A +L
Sbjct: 357 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 416

Query: 408 VREME 412
           + +M+
Sbjct: 417 MEKMK 421



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 34/330 (10%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M L  V P   T+N +   +   G++ +  +++  M           Y  LI  LCK   
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 331 VQEAERLLDQM---------------------------------KMAGIS-PNVITYNKL 356
             EA +LL  M                                 KMA  + P+ +TY  +
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ++  C     D A     ++ + G  P    YN ++    +    + A  L  +M ++ I
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ VTY  LI+   ++  +E A+E++  M   G+ P   +Y  LI G C K ++  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F+ M  +   PN V Y  +I G  K G    A  +L  M +KG+ PN+A+YS  I   C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  EA  LL QM+  G+ P+V  YNIL
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 330


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 214/435 (49%), Gaps = 35/435 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++ ++  LI   C AGD+  A + L  L   G +P+   YTS + G C+ G +  A  +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-------------------- 273
             +   G + T  TYT L+ GL   G+ ++    +  M+                     
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 274 ---------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                          NG  P++  YN LI  YCN G++    K+F+ M     + NV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LI GLCK  +V+ A  L  +M  AG+ PNV+TY  LI G C+ G    AFRL + +++
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           NG  P+  T++VLI A  K    + A   +  + ++G+  +EV YT LID   ++  ++ 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+   M   GF PD ++Y  LI GLC +  + +A+ +   M E  ++ + V Y ++I 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
              +E  S    ++  +M   G+ P+I +Y+  +   C++G+  +AE ++ QM+  G+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 559 SVSLYNILYRAKNNI 573
           ++  YN L R   N+
Sbjct: 491 NLVTYNTLIRGYANL 505



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 244/521 (46%), Gaps = 19/521 (3%)

Query: 12  LTLNLISRMAKLPPLKAF-SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLI 70
           L+  ++S  A LPPL+   +L    +R  +    +S++       S+M + +     TLI
Sbjct: 27  LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLA-------SRMPARNLRTYTTLI 79

Query: 71  -LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
               ++G I ++         HLT L  +   P   S  Y S +  + ++ +   A   F
Sbjct: 80  NAYCLAGDIPAAKQ-------HLTSLLHAGLAP--DSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEA 188
             M   G    + T+ +LL  ++ +    +    F   R      D + +  ++ G CEA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G   +A  +L +    GF PN+V+Y +LIDG C  G++E A  +F  +          TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T LI GL K+G  +     + +M   G+ P++ TY  LI   CNEG +   F+L   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N  T++ LI  LCK  +V+EA+  L  +   G+  N + Y  LIDG C  G+ D 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  ++ S G  P   +Y+ LI    +      A+ ++ +M E+GI  S VTYTI+ID
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             VR    E   +++  M  +G +PD+ TY V +   C +G M++A  +   M +  + P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           N V YN +I GY   G   +A      M  KG  PN  SY+
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 193/375 (51%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++ F  +  L     + N+  YT+LI+  C  GDI  AK     +   GL    + YT  
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + G  + G+       +  M L G   + +TY  L+H     G V E   +F  MR    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A +   Y T++ GLC+  R +EAE LL++    G  PN++ YN LIDG+C+AGE + A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +F  +  N  SP+V TY  LI    K+G  + A  L   M E G+ P+ VTYT LI    
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
               ++ AF +  LM+ +G  P+ +T+ VLI  LC +  ++EA     S+ +  ++ N+V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VY  +I G CK G    A  L+ +M  +G VP+  SYSS I  LC+  K  +A ++L  M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 552 LKLGLKPSVSLYNIL 566
           ++ G++ S   Y I+
Sbjct: 414 MEKGIQASPVTYTII 428



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 202/398 (50%), Gaps = 9/398 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID +  +   + AL  F  M  +   P   T+  L+  + KS   ++  + FS  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +E +V ++  LI+G C  G L  AF +L+ +E  G  PN   ++ LID  CK   +
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++    + + G+   +  YT LI GL K G      E  +KM   G  P  ++Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C + K+S+   + ++M  + +  + VTY  +I  L +E+  +  +++ D+M   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+++TY   +  +C+ G  + A  +  Q+   G  P++VTYN LIR ++  G    A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL-----MQKSGFSPDVYTYGVL 461
               M  +G  P+E +YT+L+   V+    + + +++ +     +Q+S +  D   + +L
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY--DEIVWKIL 571

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           I+GL  KG++ E S L + M E   +P++ + N MI G
Sbjct: 572 IYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI-NAMITG 608



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 185/396 (46%), Gaps = 13/396 (3%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E ++  +  LI G C AG++  A +V   ++    SPNV  YT LI G CK+G +ERA +
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF ++ E GL     TYT LI G    G  +  F     M+ NG+ P+ +T++ LI   C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
              KV E       +  + V  N V Y +LI GLCK  ++  A+ L+ +M   G  P+  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y+ LIDG C   +  +A  +   +   G   S VTY ++I    +   S+    +  +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              GI P  VTYT+ + S+     ME A  M   M   G  P++ TY  LI G    G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL--------LGEMNEKGLVP 523
            +A   F  M     +PN+  Y +++    K+ +S  ++ +        L E N   +V 
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVW 568

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            I  Y      L Q G   E   LL+ M + G +PS
Sbjct: 569 KILIYG-----LLQKGSVAEFSSLLSVMKEHGYQPS 599



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 166/374 (44%), Gaps = 45/374 (12%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK----SCSFDKGWL 162
           R Y  +I    KS   ++A+  F +M+++G+ P   T+ +L+          C+F    L
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR--LL 305

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
              E    V  D ++F +LI   C+   + +A   L  L + G   N V+YTSLIDG CK
Sbjct: 306 HLMETNGLVPND-WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G I+ A  L +K+   G V   H+Y+ LI GL +           E M   G+  S  T
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  +I E   E       K+FD+M    +  ++VTY   +   C+E R+++AE ++ QM 
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS- 401
             G+ PN++TYN LI G+ + G   +AF  F  +   G  P+  +Y VL+R   K  +S 
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 402 ------KMA-------------------------------SDLVREMEERGITPSEVTYT 424
                 K+A                               S L+  M+E G  PS     
Sbjct: 545 NSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINA 604

Query: 425 ILIDSFVRSDDMEK 438
           ++      ++++++
Sbjct: 605 MITGEITVTNEVQE 618



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTL+  L +     + E L  +M     + N+ TY  LI+ +C AG+   A +    L  
Sbjct: 45  NTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P    Y   +  + +AG    A  +   M  RG   +  TYT L+   + +  + +
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  ++  M+    +PD + Y  ++HGLC  G  +EA  L         EPN VVYN +I 
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC  G    AL++   M+     PN+ +Y+  I  LC+ GK   A VL ++M++ GL+P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 559 SVSLYNILYRAKNN 572
           +V  Y  L + + N
Sbjct: 281 NVVTYTALIQGQCN 294



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%)

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F   + +  R  A N+ TY TLI   C    +  A++ L  +  AG++P+   Y   + G
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C AG    A R+F  +   G   +  TY  L+     AG  + A  +   M      P 
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y  ++     +   E+A  +      +GF P++  Y  LI G C  G M+ A K+F 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M   +  PN   Y  +I G CK G   RA+ L   M E GL PN+ +Y++ I   C +G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               A  LL+ M   GL P+   +++L  A
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 214/435 (49%), Gaps = 35/435 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++ ++  LI   C AGD+  A + L  L   G +P+   YTS + G C+ G +  A  +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-------------------- 273
             +   G + T  TYT L+ GL   G+ ++    +  M+                     
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 274 ---------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                          NG  P++  YN LI  YCN G++    K+F+ M     + NV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LI GLCK  +V+ A  L  +M  AG+ PNV+TY  LI G C+ G    AFRL + +++
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           NG  P+  T++VLI A  K    + A   +  + ++G+  +EV YT LID   ++  ++ 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+   M   GF PD ++Y  LI GLC +  + +A+ +   M E  ++ + V Y ++I 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
              +E  S    ++  +M   G+ P+I +Y+  +   C++G+  +AE ++ QM+  G+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 559 SVSLYNILYRAKNNI 573
           ++  YN L R   N+
Sbjct: 491 NLVTYNTLIRGYANL 505



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 244/521 (46%), Gaps = 19/521 (3%)

Query: 12  LTLNLISRMAKLPPLKAF-SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLI 70
           L+  ++S  A LPPL+   +L    +R  +    +S++       S+M + +     TLI
Sbjct: 27  LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLA-------SRMPARNLRTYTTLI 79

Query: 71  -LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
               ++G I ++         HLT L  +   P   S  Y S +  + ++ +   A   F
Sbjct: 80  NAYCLAGDIPAAKQ-------HLTSLLHAGLAP--DSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEA 188
             M   G    + T+ +LL  ++ +    +    F   R      D + +  ++ G CEA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G   +A  +L +    GF PN+V+Y +LIDG C  G++E A  +F  +          TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T LI GL K+G  +     + +M   G+ P++ TY  LI   CNEG +   F+L   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N  T++ LI  LCK  +V+EA+  L  +   G+  N + Y  LIDG C  G+ D 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  ++ S G  P   +Y+ LI    +      A+ ++ +M E+GI  S VTYTI+ID
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             VR    E   +++  M  +G +PD+ TY V +   C +G M++A  +   M +  + P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           N V YN +I GY   G   +A      M  KG  PN  SY+
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 193/375 (51%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++ F  +  L     + N+  YT+LI+  C  GDI  AK     +   GL    + YT  
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + G  + G+       +  M L G   + +TY  L+H     G V E   +F  MR    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A +   Y T++ GLC+  R +EAE LL++    G  PN++ YN LIDG+C+AGE + A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +F  +  N  SP+V TY  LI    K+G  + A  L   M E G+ P+ VTYT LI    
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
               ++ AF +  LM+ +G  P+ +T+ VLI  LC +  ++EA     S+ +  ++ N+V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VY  +I G CK G    A  L+ +M  +G VP+  SYSS I  LC+  K  +A ++L  M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 552 LKLGLKPSVSLYNIL 566
           ++ G++ S   Y I+
Sbjct: 414 MEKGIQASPVTYTII 428



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 221/460 (48%), Gaps = 17/460 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID +  +   + AL  F  M  +   P   T+  L+  + KS   ++  + FS  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +E +V ++  LI+G C  G L  AF +L+ +E  G  PN   ++ LID  CK   +
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++    + + G+   +  YT LI GL K G      E  +KM   G  P  ++Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C + K+S+   + ++M  + +  + VTY  +I  L +E+  +  +++ D+M   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+++TY   +  +C+ G  + A  +  Q+   G  P++VTYN LIR ++  G    A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 407 LVREMEERGITPSEVTYTILIDSFVR------SDDMEKAFEMYSLM--------QKSGFS 452
               M  +G  P+E +YT+L+   V+      S D+ K  +M  L         ++   +
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D+Y+    I  LC    ++EA   F  M    L P++ VY  +I   C+      AL L
Sbjct: 574 ADIYS--CFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTL 631

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           L  M + G +P++ SY   I  LC+ G +  A+ +   +L
Sbjct: 632 LDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLL 671



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 187/405 (46%), Gaps = 12/405 (2%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E ++  +  LI G C AG++  A +V   ++    SPNV  YT LI G CK+G +ERA +
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF ++ E GL     TYT LI G    G  +  F     M+ NG+ P+ +T++ LI   C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
              KV E       +  + V  N V Y +LI GLCK  ++  A+ L+ +M   G  P+  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y+ LIDG C   +  +A  +   +   G   S VTY ++I    +   S+    +  +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              GI P  VTYT+ + S+     ME A  M   M   G  P++ TY  LI G    G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR------------LLGEMNEK 519
            +A   F  M     +PN+  Y +++    K+ +S  ++             LL ++ E+
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L      YS  I  LC+  +  EA+     M    L PS  +Y 
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 212/469 (45%), Gaps = 54/469 (11%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK----SCSFDKGWL 162
           R Y  +I    KS   ++A+  F +M+++G+ P   T+ +L+          C+F    L
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR--LL 305

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
              E    V  D ++F +LI   C+   + +A   L  L + G   N V+YTSLIDG CK
Sbjct: 306 HLMETNGLVPND-WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G I+ A  L +K+   G V   H+Y+ LI GL +           E M   G+  S  T
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  +I E   E       K+FD+M    +  ++VTY   +   C+E R+++AE ++ QM 
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN++TYN LI G+ + G   +AF  F  +   G  P+  +Y VL+R   K  +S 
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 403 MASD------------LVREMEER-----------------------------------G 415
            + D            L+ ++ ER                                    
Sbjct: 545 NSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           +TPSE  YT +ID   R   +  A  +   M KSG+ P + +Y ++I  LC  GN + A 
Sbjct: 605 LTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAK 664

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           ++F  +   +   +++V+ ++I+G  ++G+      LL  M E G  P+
Sbjct: 665 EVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTL+  L +     + E L  +M     + N+ TY  LI+ +C AG+   A +    L  
Sbjct: 45  NTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P    Y   +  + +AG    A  +   M  RG   +  TYT L+   + +  + +
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  ++  M+    +PD + Y  ++HGLC  G  +EA  L         EPN VVYN +I 
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC  G    AL++   M+     PN+ +Y+  I  LC+ GK   A VL ++M++ GL+P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 559 SVSLYNILYRAKNN 572
           +V  Y  L + + N
Sbjct: 281 NVVTYTALIQGQCN 294



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%)

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F   + +  R  A N+ TY TLI   C    +  A++ L  +  AG++P+   Y   + G
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C AG    A R+F  +   G   +  TY  L+     AG  + A  +   M      P 
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y  ++     +   E+A  +      +GF P++  Y  LI G C  G M+ A K+F 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M   +  PN   Y  +I G CK G   RA+ L   M E GL PN+ +Y++ I   C +G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               A  LL+ M   GL P+   +++L  A
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/448 (20%), Positives = 164/448 (36%), Gaps = 118/448 (26%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
           Y ++I           A    H M  +G+ P   TF+ L+  + K    ++  LF  S  
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V+++   +  LI G C+ G ++ A E++ ++   GF P+   Y+SLIDG C+   + 
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN----------------------------- 258
           +A ++   + E G+ A+  TYT++I  L +                              
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 259 ------GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK----------- 301
                 G  +D      +M   GV P+L TYN LI  Y N G VS+ F            
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524

Query: 302 ------------------------------------LFDEMRHREVACNVVTYNTLICGL 325
                                               L +++  R++      Y+  I  L
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCL 584

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C+  R++EA+     M+ A ++P+   Y  +ID  C       A  L + +  +G  P +
Sbjct: 585 CRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHL 644

Query: 386 VTYNVLIRAFSKAGNSKMA-----------------------------------SDLVRE 410
            +Y ++I +  + GN + A                                   S L+  
Sbjct: 645 ESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSV 704

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEK 438
           M+E G  PS     ++      ++++++
Sbjct: 705 MKEHGYQPSNTINAMITGEITVTNEVQE 732



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 56/264 (21%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +AFS F     +G +    S +++LRL++ K SS +       I  +   ++     T R
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK-IADMKDLQVLLEDITER 568

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L        P +++      +Y   I    +    ++A  +F  M ++ + P  + + S
Sbjct: 569 QL--------PLAAD------IYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
                                             +I  CC    L  A  +L+ + + G+
Sbjct: 615 ----------------------------------IIDCCCRLKILTDALTLLDSMTKSGY 640

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH---TYTVLICGLFKNGLQKD 263
            P++  Y  +I   C+ G+   AK +F   G+L L  + +    + +LI GL + G   +
Sbjct: 641 LPHLESYRIIISSLCEGGNFRTAKEVF---GDLLLKESNYDEIVWKILIYGLLQKGSVAE 697

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLI 287
                  M+ +G  PS  T N +I
Sbjct: 698 FSSLLSVMKEHGYQPS-NTINAMI 720


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 162/575 (28%), Positives = 258/575 (44%), Gaps = 67/575 (11%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A   F WAS     + P  I             H+ +  + LI K+ S R      T +
Sbjct: 109 QALQTFRWAS-----NLPNFI-------------HNQSTYRALIHKLCSFRRFE---TVK 147

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            +L  +    PSS        ++ +I+    ++R+  Q +     +   G  P    FNS
Sbjct: 148 EVLDEM----PSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNS 203

Query: 147 LLIFVIKSCSFDKGWLFFSENRC--KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +L  ++K    D    F+ +      V  D Y+FGIL+KG C    +  AF++L  ++  
Sbjct: 204 ILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSR 262

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G +PN VIY ++I   CKNG + RA+ L  ++ E     +  T+ VLI    +       
Sbjct: 263 GKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQA 318

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               EK    G  P + T   ++   C  G+V+EG ++ + +       +VV YNTLI G
Sbjct: 319 LVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKG 378

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C   + +   R+L  M++ G  PNV TYN L  G+CD+G  D A  LFN +K++G + +
Sbjct: 379 FCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWN 438

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEE-RGITPSEVT-YTILIDSFVRSDDMEKAFE- 441
            +TY+ LIR     G  +    ++  MEE RG     ++ Y  +I    + +  E+A E 
Sbjct: 439 FMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEF 498

Query: 442 --------------------------------MYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                                           +Y  M K G  P V  Y  LIHG C  G
Sbjct: 499 LTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDG 558

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           N++EA +L N M +    P    +N +I  +C +G    AL+L+ +M  +G +P++ SYS
Sbjct: 559 NVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYS 618

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             +  LC  G + +A  L  QM++  + P  S +N
Sbjct: 619 PMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWN 653



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 209/441 (47%), Gaps = 8/441 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVY 176
           L +R+ D A      M   G  P +  +N+++  + K+    +     +E    VE    
Sbjct: 245 LTNRIGD-AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNE---MVEPSDV 300

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F +LI   C+  +L +A  +L +   MGF P+VV  T ++   CK G +     +  ++
Sbjct: 301 TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV 360

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             +G V     Y  LI G    G  K G    + M++ G  P++ TYN L   YC+ G +
Sbjct: 361 ESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGML 420

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK--MAGISPNVITYN 354
                LF++M+   +  N +TY+TLI GLC   R+++  ++L+ M+    G    +  YN
Sbjct: 421 DSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYN 480

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I G     + ++A     +++     P  V  ++ I  F   G+   A  +  +M + 
Sbjct: 481 SIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKE 538

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  PS + Y  LI  F +  ++ +AFE+ + M   G+ P   T+  LI   C +G +  A
Sbjct: 539 GGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSA 598

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            KL   M      P+   Y+ M+   C +G+  +A+RL  +M EK ++P+ ++++S +  
Sbjct: 599 LKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLC 658

Query: 535 LCQDGKWPEAEVLLNQMLKLG 555
           L Q+  W E + L +  L+ G
Sbjct: 659 LTQETVWLEGDNLFHLQLQDG 679


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 242/477 (50%), Gaps = 9/477 (1%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           LFP   N VT    Y  +I+    S   ++A   + QM  +G+ P     NSLL   +K+
Sbjct: 396 LFP---NKVT----YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 448

Query: 155 CSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             +++    F E   C V  +++++ I++   C+ G +++A  +L+ +   G  PNVV Y
Sbjct: 449 PLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             +I G C+ G+++ A  +F  +    L     TY++LI G FK G  +   + +++M  
Sbjct: 508 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P+ +T+N +I+  C  G++SE               + +TYN+++ G  KE  +  
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  +  +M   G+SPNV+TY  LI+GFC +   D A +  ++++  G    V  Y+ LI 
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F K  + + A DL  E+ E G++P+ + Y  +I  F   ++ME A   Y  M       
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY  LI GL  +G +  AS L+  M    + P+ + +++++ G C +G    A ++L
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            EM+ K + P++  Y++ I    ++G   EA  L ++ML  GL P    Y+IL   K
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 864



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 232/528 (43%), Gaps = 70/528 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  II A  K   S+  L    +M + G  P   TF S+++  +   +  +      E  
Sbjct: 298 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C   +++     L+KG C  G+L+ A  + N++ E G  PN V Y+ LI+GCC +G+IE
Sbjct: 358 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 417

Query: 228 RAKMLFRKIGELGL----------------------------------VATQHTYTVLIC 253
           +A  L+ ++   G+                                  VA   TY +++ 
Sbjct: 418 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMS 477

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K G   +     + M   G+ P++ +YN +I  +C +G +     +F +M  R++  
Sbjct: 478 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 537

Query: 314 NVVTY-----------------------------------NTLICGLCKEMRVQEAERLL 338
           NVVTY                                   NT+I GLCK  ++ EA   L
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                 G  P+ +TYN ++DGF   G  D A  ++ ++   G SP+VVTY  LI  F K+
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 657

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
               +A     EM E+G+      Y+ LID F +  DME A +++  + + G SP+   Y
Sbjct: 658 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 717

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             +I G     NM+ A   +  M   ++  +   Y  +I G  KEG    A  L  EM  
Sbjct: 718 NSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS 777

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           KG+VP+I ++   +  LC  G+   A  +L +M +  + PSV +YN L
Sbjct: 778 KGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 1/385 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A      M++ G+ P   ++N +++   +  + D     FS+   + ++ +V ++ IL
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G  + GD  KA ++ +Q+  +  +P    + ++I+G CK G +  A+   +   E G 
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + +  TY  ++ G  K G        Y +M   GVSP++ TY  LI+ +C   ++    K
Sbjct: 606 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
             DEMR + +  +V  Y+ LI G CK   ++ A+ L  ++   G+SPN I YN +I GF 
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           D    + A   + ++ ++     + TY  LI    K G    ASDL  EM  +GI P  +
Sbjct: 726 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T+ +L++       +E A ++   M +   +P V  Y  LI G   +GN+KEA  L + M
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNS 506
            +  L P+DV Y+++I G  K   S
Sbjct: 846 LDRGLVPDDVTYDILINGKFKGDRS 870



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 1/399 (0%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R   ELD   F  L+     A  +  A +  N +      P V     L+    +   I 
Sbjct: 183 RFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIG 242

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             + L+ K+   G+     T  V++    K G  ++  E++ + +  GV      Y+ +I
Sbjct: 243 ELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIII 302

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C +   + G +L +EM+ R    +  T+ ++I     +  + EA RL ++M   G  
Sbjct: 303 QAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKP 362

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N++    L+ G+C  G  D A  LFN++  +G  P+ VTY+VLI     +GN + AS+L
Sbjct: 363 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 422

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M+  GI PS      L+  ++++   E+A +++      G + +++TY +++  LC 
Sbjct: 423 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCK 481

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M EA  L ++M    + PN V YN MI G+C++GN   A  +  +M  + L PN+ +
Sbjct: 482 GGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT 541

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  I    + G   +A  L +QML L + P+   +N +
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 580



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 180/370 (48%), Gaps = 1/370 (0%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           ++N  +   F  +  ++  L++   +   IE A   F  +    ++       +L+  L 
Sbjct: 177 LINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALV 236

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +  +  +  + Y KM L G+    +T + ++     EG+V E  + F E + R V  +  
Sbjct: 237 RRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAG 296

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            Y+ +I  +CK+        LL++MK  G  P+  T+  +I      G   +A RL  ++
Sbjct: 297 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            + G+  ++V    L++ +   GN   A +L  ++ E G+ P++VTY++LI+    S ++
Sbjct: 357 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNI 416

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           EKA E+Y+ M+ +G  P V+    L+ G       +EASKLF+   +  +  N   YN+M
Sbjct: 417 EKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIM 475

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   CK G    A  LL  M  +G+VPN+ SY+  I   C+ G    A  + + ML   L
Sbjct: 476 MSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDL 535

Query: 557 KPSVSLYNIL 566
           KP+V  Y+IL
Sbjct: 536 KPNVVTYSIL 545



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 8/270 (2%)

Query: 301 KLFD-EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           K FD E+ HR        +N L+    +  R++ A    + M    + P V   N L+  
Sbjct: 182 KRFDFELDHR-------VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTA 234

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
                   +   L+N++   G      T +V++RA  K G  + A +  RE +ERG+   
Sbjct: 235 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 294

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y+I+I +  +  +     E+   M++ G+ P   T+  +I     +GNM EA +L  
Sbjct: 295 AGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 354

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M       N VV   ++ GYC +GN   AL L  ++ E GL PN  +YS  I   C  G
Sbjct: 355 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 414

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              +A  L  QM   G+ PSV   N L R 
Sbjct: 415 NIEKASELYTQMKLNGIPPSVFNVNSLLRG 444


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 231/464 (49%), Gaps = 2/464 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K+R    ++    K   +D    +F  M+ +G RP   T+N ++  + K    +     F
Sbjct: 94  KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 153

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E + + +  D  ++  +I G  + G L+       ++++M   P+V+ Y +LI+  CK 
Sbjct: 154 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 213

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +      +R++   GL     +Y+ L+    K G+ +   +FY  M+  G+ P+ YTY
Sbjct: 214 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 273

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI   C  G +S+ F+L +EM    V  NVVTY  LI GLC   R++EAE L  +M  
Sbjct: 274 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 333

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG+ PN+ +YN LI GF  A   D+A  L N+LK  G  P ++ Y   I         + 
Sbjct: 334 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 393

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  ++ EM+E GI  + + YT L+D++ +S +  +   +   M++      V T+ VLI 
Sbjct: 394 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 453

Query: 464 GLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           GLC    + +A   FN +  +  L+ N  ++  MI G CK+     A  L  +M +KGLV
Sbjct: 454 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 513

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+  +Y+S +    + G   EA  L ++M ++G+K  +  Y  L
Sbjct: 514 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 557



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 255/534 (47%), Gaps = 16/534 (2%)

Query: 36  SRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ 94
           +R G +H+ +S  I+  +L  ++M   +++  + ++L      +    ++ R++      
Sbjct: 2   TRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFG 61

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           +F +         L+  +ID  +     ++A+  F +M    V P++ + N LL    K 
Sbjct: 62  VFDA---------LFSVLIDLGM----LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 108

Query: 155 CSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              D    FF +         V+++ I+I   C+ GD+  A  +  +++  G  P+ V Y
Sbjct: 109 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 168

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            S+IDG  K G ++     F ++ ++       TY  LI    K G    G EFY +M+ 
Sbjct: 169 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           NG+ P++ +Y+ L+  +C EG + +  K + +MR   +  N  TY +LI   CK   + +
Sbjct: 229 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 288

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A RL ++M   G+  NV+TY  LIDG CDA    +A  LF ++ + G  P++ +YN LI 
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 348

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F KA N   A +L+ E++ RGI P  + Y   I      + +E A  + + M++ G   
Sbjct: 349 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +   Y  L+      GN  E   L + M E  +E   V + ++I G CK     +A+   
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 468

Query: 514 GEM-NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + N+ GL  N A +++ I  LC+D +   A  L  QM++ GL P  + Y  L
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 522



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 4/365 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GF     +++ LID     G +E A   F K+    +     +   L+    K G   D 
Sbjct: 59  GFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
             F++ M   G  P+++TYN +I   C EG V     LF+EM+ R +  + VTYN++I G
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             K  R+ +     ++MK     P+VITYN LI+ FC  G+       + ++K NG  P+
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VV+Y+ L+ AF K G  + A     +M   G+ P+E TYT LID+  +  ++  AF + +
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G   +V TY  LI GLC    MKEA +LF  M    + PN   YN +I G+ K  
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           N  RAL LL E+  +G+ P++  Y + I  LC   K   A+V++N+M + G+K +  +Y 
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 565 ILYRA 569
            L  A
Sbjct: 415 TLMDA 419



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 207/427 (48%), Gaps = 8/427 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y S+ID   K    D  + +F +M D    P   T+N+L+    K      G  
Sbjct: 162 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 221

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           F+ E +   ++ +V S+  L+   C+ G + +A +    +  +G  PN   YTSLID  C
Sbjct: 222 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 281

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G++  A  L  ++ ++G+     TYT LI GL      K+  E + KM   GV P+L 
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +YN LIH +     +    +L +E++ R +  +++ Y T I GLC   +++ A+ ++++M
Sbjct: 342 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K  GI  N + Y  L+D +  +G   +   L +++K      +VVT+ VLI    K   +
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK---N 458

Query: 402 KMASDLV----REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           K+ S  V    R   + G+  +   +T +ID   + + +E A  ++  M + G  PD   
Sbjct: 459 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 518

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  L+ G   +GN+ EA  L + M E  ++ + + Y  +++G        +A   L EM 
Sbjct: 519 YTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 578

Query: 518 EKGLVPN 524
            +G+ P+
Sbjct: 579 GEGIHPD 585



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 4/343 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           Y S+IDA+ K   LSD A    ++ML  GV     T+ +L+  +  +    +   LF   
Sbjct: 273 YTSLIDANCKIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   V  ++ S+  LI G  +A ++++A E+LN+L+  G  P++++Y + I G C    I
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 391

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E AK++  ++ E G+ A    YT L+   FK+G   +G    ++M+   +  ++ T+  L
Sbjct: 392 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 451

Query: 287 IHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           I   C    VS+    F+ + +   +  N   +  +I GLCK+ +V+ A  L +QM   G
Sbjct: 452 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+   Y  L+DG    G   +A  L +++   G    ++ Y  L+   S     + A 
Sbjct: 512 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 571

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             + EM   GI P EV    ++        +++A E+ S + K
Sbjct: 572 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P    ++ L     D G  ++A + F+++K     P   + N L+  F+K G +      
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M   G  P+  TY I+ID   +  D+E A  ++  M+  G  PD  TY  +I G   
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +    F  M +   EP+ + YN +I  +CK G     L    EM   GL PN+ S
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           YS+ +   C++G   +A      M ++GL P+   Y  L  A   I
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 283


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 233/515 (45%), Gaps = 76/515 (14%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGIL 181
           A+  F+ +   G  P   T N  L  ++K+  F+K    F   SE  C    DV+SF  +
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACP---DVFSFTNV 226

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+ G +  A E+  ++E++G SPNVV Y  +I+G C+NG ++ A  L  K+   G+
Sbjct: 227 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 286

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY  LI GL K           ++M   G +P++  +N LI  YC  G +    K
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALK 346

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-------------- 347
           + D M  + +    VT  +L+ G CK  +++ AE  L+++  +G+S              
Sbjct: 347 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 406

Query: 348 ---------------------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
                                P+ +    L+ G C  G+  +A  L+ +L   G   S V
Sbjct: 407 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 466

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T N LI     AG    AS +V+EM ERG+    +TY  LI  F     +E  F +   M
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASK------------------------------ 476
            K G  PD+YTY  L+ GLC  G + +A K                              
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586

Query: 477 -----LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
                LFN +   K+E N +VYN++I  +C+ GN   AL+LL  M  KG++PN A+YSS 
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  +C  G   +A+ L+++M K G  P+V  Y  L
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 681



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 235/544 (43%), Gaps = 75/544 (13%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y  II+   ++   D A     +M   GV+P   T+ +L+  +IK   FD
Sbjct: 252 SPNVVT----YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307

Query: 159 KGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K      E        +V  F  LI G C+ G++  A ++ + +     +P  V   SL+
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 367

Query: 218 DGCCKNGDIERAKMLFRKIGELGL-VATQHTYTV-------------------------- 250
            G CK+  IE A+    +I   GL +   + Y+V                          
Sbjct: 368 QGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFR 427

Query: 251 --------LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                   L+CGL K+G   +  E + ++   G   S  T N LIH  C  GK+ E  ++
Sbjct: 428 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 487

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM  R +  + +TYN LI G C E +V+   RL ++M   GI P++ TYN L+ G C+
Sbjct: 488 VKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN 547

Query: 363 AGETDKAFRLFNQLKSNGQSPSV-----------------------------------VT 387
            G+ D A +L+++ K++G   ++                                   + 
Sbjct: 548 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 607

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN++I+A  + GN   A  L+  M+ +GI P+  TY+ LI        +E A  +   M+
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           K GF P+V  Y  LI G C  G M  A   +  M    + PN   Y +MI GYCK GN  
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +A  LL +M E G+VP++ +Y+      C+      A  + +QM   GL      Y  L 
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787

Query: 568 RAKN 571
              N
Sbjct: 788 HGWN 791


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 235/505 (46%), Gaps = 41/505 (8%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           L +S I ++ + +L D A       LD  GV+  +  +N LL  + +          ++E
Sbjct: 127 LVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTE 186

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + +E DV +F  +I   C A     A  +L ++     +P+   +T+L++G  + G 
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           IE A  L  ++ E+G   T  T  VLI G  K G   D   + ++   +G  P   T++ 
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            ++  C  G V    K+   M       +V TY+T+I  LC    ++EA+ +++QM  +G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  T+N LI   C   + ++A  L  +L   G SP+V T+N+LI A  K G+  +A 
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  EM+  G TP EVTY ILID+   S  + KA ++   M+ SG      TY  +I GL
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486

Query: 466 CMKGNMKEASKLFNSMWET-----------------------------------KLEPND 490
           C +  ++EA ++F+ M  T                                    L+PN+
Sbjct: 487 CKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNN 546

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN ++  YCK+GN  +A  +L  M   G   ++ +Y++ I  LC+  +   A  LL  
Sbjct: 547 VTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG 606

Query: 551 MLKLGLKPSVSLYNI----LYRAKN 571
           M   G+KP+   YN     L+R  N
Sbjct: 607 MRMKGMKPTPKAYNPVIQSLFRGNN 631



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 228/495 (46%), Gaps = 37/495 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FS 165
           + ++IDA  ++R +  A+    +M    V P   TF +L+   ++  S +         S
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258

Query: 166 ENRCK---------------------------------VELDVYSFGILIKGCCEAGDLN 192
           E  C                                   E D  +F   + G C+ G ++
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVD 318

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A +VL  + + G  P+V  Y+++I+  C NG++E AK +  ++ + G +    T+  LI
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLI 378

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L      ++  +   ++ + G+SP++YT+N LI+  C  G      +LF+EM+     
Sbjct: 379 VALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT 438

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTYN LI  LC   ++ +A  LL +M+++G   + +TYN +IDG C     ++A  +
Sbjct: 439 PDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV 498

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+Q+   G   + +T+N LI     A     A++LV +M   G+ P+ VTY  ++  + +
Sbjct: 499 FDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCK 558

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             ++ KA ++   M  +GF  DV TY  LI+GLC     + A KL   M    ++P    
Sbjct: 559 QGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKA 618

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ-DGKWPEAEVLLNQM 551
           YN +I    +  N   AL L  EM E G  P+  +Y      LC+  G   EA   L +M
Sbjct: 619 YNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEM 678

Query: 552 LKLGLKPSVSLYNIL 566
              G  P  S + +L
Sbjct: 679 ADNGFIPEFSSFRML 693



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 182/359 (50%), Gaps = 2/359 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+    +   ++A    +QM+DSG  P + TFN+L++ +      ++      E  
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +  +VY+F ILI   C+ GD + A  +  +++  G +P+ V Y  LID  C +G + 
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L +++   G   +  TY  +I GL K    ++  E +++M + G+  +  T+N LI
Sbjct: 459 KALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLI 518

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              CN  ++ +  +L D+M    +  N VTYN+++   CK+  + +A  +L  M   G  
Sbjct: 519 DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+TY  LI+G C A  T  A +L   ++  G  P+   YN +I++  +  N + A  L
Sbjct: 579 VDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSL 638

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDD-MEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            REM E G  P   TY I+     R    +++AF+    M  +GF P+  ++ +L  GL
Sbjct: 639 FREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 191 LNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            + AF+++ NQL+  G   N  +Y  L+    +   I+  +  + ++   G+     T+ 
Sbjct: 141 FDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFN 200

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I  L +    +      E+M    V+P   T+  L+  +  EG +    +L   M   
Sbjct: 201 TVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM 260

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
             +   VT N LI G CK  RV +A   + Q    G  P+ +T++  ++G C  G  D A
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++   +   G  P V TY+ +I      G  + A  +V +M + G  P   T+  LI +
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
               + +E+A ++   +   G SP+VYT+ +LI+ LC  G+   A +LF  M  +   P+
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
           +V YN++I   C  G   +AL LL EM   G   +  +Y++ I  LC+  +  EAE + +
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFD 500

Query: 550 QMLKLGLKPSVSLYNILYRAKNNIE 574
           QM   G+  +   +N L     N E
Sbjct: 501 QMDVTGIGRNAITFNTLIDGLCNAE 525



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 112/323 (34%), Gaps = 108/323 (33%)

Query: 355 KLIDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +L+    +  + + A R+ N    + +G +PS   Y  +IR    AG   +   LV EM 
Sbjct: 58  RLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMR 117

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEM------------------------------ 442
             G           I S+ R    + AF++                              
Sbjct: 118 REGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKI 177

Query: 443 ------YSLMQKSGFSPDVYTYGVLIHGLC------------------------------ 466
                 Y+ M   G  PDV T+  +I  LC                              
Sbjct: 178 KLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTL 237

Query: 467 MKGNMKEAS-----KLFNSMWETKLEPNDVVYNMMIFGYCK------------------- 502
           M+G ++E S     +L   M E    P  V  N++I GYCK                   
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGF 297

Query: 503 ----------------EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
                            G+   AL++LG M ++G  P++ +YS+ I  LC +G+  EA+ 
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           ++NQM+  G  P  + +N L  A
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVA 380


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 242/477 (50%), Gaps = 9/477 (1%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           LFP   N VT    Y  +I+    S   ++A   + QM  +G+ P     NSLL   +K+
Sbjct: 356 LFP---NKVT----YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 408

Query: 155 CSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             +++    F E   C V  +++++ I++   C+ G +++A  +L+ +   G  PNVV Y
Sbjct: 409 PLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             +I G C+ G+++ A  +F  +    L     TY++LI G FK G  +   + +++M  
Sbjct: 468 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
             ++P+ +T+N +I+  C  G++SE               + +TYN+++ G  KE  +  
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  +  +M   G+SPNV+TY  LI+GFC +   D A +  ++++  G    V  Y+ LI 
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F K  + + A DL  E+ E G++P+ + Y  +I  F   ++ME A   Y  M       
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+ TY  LI GL  +G +  AS L+  M    + P+ + +++++ G C +G    A ++L
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            EM+ K + P++  Y++ I    ++G   EA  L ++ML  GL P    Y+IL   K
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 824



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 232/528 (43%), Gaps = 70/528 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  II A  K   S+  L    +M + G  P   TF S+++  +   +  +      E  
Sbjct: 258 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C   +++     L+KG C  G+L+ A  + N++ E G  PN V Y+ LI+GCC +G+IE
Sbjct: 318 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377

Query: 228 RAKMLFRKIGELGL----------------------------------VATQHTYTVLIC 253
           +A  L+ ++   G+                                  VA   TY +++ 
Sbjct: 378 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMS 437

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K G   +     + M   G+ P++ +YN +I  +C +G +     +F +M  R++  
Sbjct: 438 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 497

Query: 314 NVVTY-----------------------------------NTLICGLCKEMRVQEAERLL 338
           NVVTY                                   NT+I GLCK  ++ EA   L
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                 G  P+ +TYN ++DGF   G  D A  ++ ++   G SP+VVTY  LI  F K+
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 617

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
               +A     EM E+G+      Y+ LID F +  DME A +++  + + G SP+   Y
Sbjct: 618 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 677

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             +I G     NM+ A   +  M   ++  +   Y  +I G  KEG    A  L  EM  
Sbjct: 678 NSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS 737

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           KG+VP+I ++   +  LC  G+   A  +L +M +  + PSV +YN L
Sbjct: 738 KGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 191/381 (50%), Gaps = 1/381 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A      M++ G+ P   ++N +++   +  + D     FS+   + ++ +V ++ IL
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G  + GD  KA ++ +Q+  +  +P    + ++I+G CK G +  A+   +   E G 
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           + +  TY  ++ G  K G        Y +M   GVSP++ TY  LI+ +C   ++    K
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
             DEMR + +  +V  Y+ LI G CK   ++ A+ L  ++   G+SPN I YN +I GF 
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           D    + A   + ++ ++     + TY  LI    K G    ASDL  EM  +GI P  +
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T+ +L++       +E A ++   M +   +P V  Y  LI G   +GN+KEA  L + M
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805

Query: 482 WETKLEPNDVVYNMMIFGYCK 502
            +  L P+DV Y+++I G  K
Sbjct: 806 LDRGLVPDDVTYDILINGKFK 826



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 1/399 (0%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R   ELD   F  L+     A  +  A +  N +      P V     L+    +   I 
Sbjct: 143 RFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIG 202

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             + L+ K+   G+     T  V++    K G  ++  E++ + +  GV      Y+ +I
Sbjct: 203 ELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIII 262

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C +   + G +L +EM+ R    +  T+ ++I     +  + EA RL ++M   G  
Sbjct: 263 QAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKP 322

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N++    L+ G+C  G  D A  LFN++  +G  P+ VTY+VLI     +GN + AS+L
Sbjct: 323 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 382

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M+  GI PS      L+  ++++   E+A +++      G + +++TY +++  LC 
Sbjct: 383 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCK 441

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M EA  L ++M    + PN V YN MI G+C++GN   A  +  +M  + L PN+ +
Sbjct: 442 GGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT 501

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  I    + G   +A  L +QML L + P+   +N +
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 1/371 (0%)

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            ++N  +   F  +  ++  L++   +   IE A   F  +    ++       +L+  L
Sbjct: 136 HLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTAL 195

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            +  +  +  + Y KM L G+    +T + ++     EG+V E  + F E + R V  + 
Sbjct: 196 VRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDA 255

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             Y+ +I  +CK+        LL++MK  G  P+  T+  +I      G   +A RL  +
Sbjct: 256 GAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEE 315

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + + G+  ++V    L++ +   GN   A +L  ++ E G+ P++VTY++LI+    S +
Sbjct: 316 MINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGN 375

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +EKA E+Y+ M+ +G  P V+    L+ G       +EASKLF+   +  +  N   YN+
Sbjct: 376 IEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNI 434

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           M+   CK G    A  LL  M  +G+VPN+ SY+  I   C+ G    A  + + ML   
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494

Query: 556 LKPSVSLYNIL 566
           LKP+V  Y+IL
Sbjct: 495 LKPNVVTYSIL 505



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 8/270 (2%)

Query: 301 KLFD-EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           K FD E+ HR        +N L+    +  R++ A    + M    + P V   N L+  
Sbjct: 142 KRFDFELDHR-------VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTA 194

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
                   +   L+N++   G      T +V++RA  K G  + A +  RE +ERG+   
Sbjct: 195 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 254

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y+I+I +  +  +     E+   M++ G+ P   T+  +I     +GNM EA +L  
Sbjct: 255 AGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 314

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M       N VV   ++ GYC +GN   AL L  ++ E GL PN  +YS  I   C  G
Sbjct: 315 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 374

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              +A  L  QM   G+ PSV   N L R 
Sbjct: 375 NIEKASELYTQMKLNGIPPSVFNVNSLLRG 404


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 240/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y ++ID   K+++ D+A   F QM+D GV+P ++T+N L+                    
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 149 IFVIKSCSFDKG----------------WLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
              +K   +  G                +LF S  R  ++ +V  +GILI G    G L+
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +  ++LN + E G SP+  I+  +     K   I+ A  +F K+ + GL      Y  LI
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P+++ +N L++  C   K  +  + + EM ++ + 
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VV +NT++C LC + +V +A+RL+D M+  G  P VI+Y  LI G C  G  D+A + 
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKS 540

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P   TYN L+  + +AG    A  + REM   GITP  VTY+ ++     
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  SG   +++ Y ++++GL     + EA KLF S+     +     
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI    K G +  A+ L   ++  GLVP++ +Y      L ++G   E + L + M 
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 721 KSGTTPNSRMLNALVR 736



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 242/525 (46%), Gaps = 68/525 (12%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N +  ++L + + DA    RL +       +M + G  P   ++N+LL          KG
Sbjct: 128 NNIVINQLLKGLCDA---KRLCEAMDILVKRMPELGCTPDVVSYNTLL----------KG 174

Query: 161 WLFFSENRCKVELD----------------VYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
             F +E R +  L+                V S+ I+I G    G ++KA+ +  ++ + 
Sbjct: 175 --FCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDR 232

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PNVV YT++IDG CK   ++RA+ +F+++ + G+     TY  LI G    G  K+ 
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               E+M  +G+ P  YTY  L++  CN G+  E   LFD M  + +  NV  Y  LI G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHG 352

Query: 325 -----------------------------------LCKEMRVQEAERLLDQMKMAGISPN 349
                                                K+  + EA  + ++MK  G+SP+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+ Y  LID  C  G  D A   FNQ+ + G +P++  +N L+         + A +   
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +GI P  V +  ++ +      + KA  +  LM++ G  P V +Y  LI G C+ G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA+K  + M    L+P++  YN ++ GYC+ G    A  +  EM   G+ P + +YS
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR--AKNN 572
           + +  L    ++ EA+ L   M+  G + ++ +YNI+    +KNN
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 191/401 (47%), Gaps = 4/401 (0%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI-ER 228
           KV  D  ++ ILI   C  G L   F     + + G+  N ++   L+ G C    + E 
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM---QLNGVSPSLYTYNC 285
             +L +++ ELG      +Y  L+ G       ++  E    M   Q     P++ +Y  
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG+V + + LF EM  R +  NVVTY T+I GLCK   V  AE +  QM   G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  TYN LI G+   G+  +  R+  ++ ++G  P   TY  L+      G  + A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   M  +GI P+   Y ILI  +     + +  ++ +LM ++G SPD + + ++    
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             K  + EA  +FN M +  L P+ V Y  +I   CK G    A+    +M  +G+ PNI
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++S +  LC   KW +A+    +ML  G++P V  +N +
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 207/462 (44%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+        D+A   F +M+D G++P   T+ +++  + K+   D+    F +  
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ D  ++  LI G    G   +   +L ++   G  P+   Y SL++  C NG   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  +   G+      Y +LI G    G   +  +    M  NG+SP  + +N + 
Sbjct: 326 EARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  +  + E   +F++M+ + ++ +VV Y  LI  LCK  RV +A    +QM   G++
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+  +N L+ G C   + +KA   + ++ + G  P VV +N ++      G    A  L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  ME  G  P  ++YT LI        +++A +   +M   G  PD +TY  L+HG C 
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A  +F  M    + P  V Y+ ++ G         A  L   M   G   NI  
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  L ++    EA  L   +     +  ++ +NI+  A
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 4/298 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA- 334
           V+P   TY+ LI  +C  G++  GF  F  +       N +  N L+ GLC   R+ EA 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQS--PSVVTYNVL 391
           + L+ +M   G +P+V++YN L+ GFC+    ++A  L + +  S G+S  P+VV+Y ++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F   G    A +L  EM +RGI P+ VTYT +ID   ++  +++A  ++  M   G 
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD  TY  LIHG    G  KE  ++   M    L+P+   Y  ++   C  G    A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L   M  KG+ PN+A Y   I      G   E   LLN M++ GL P   ++NI++ A
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 202/429 (47%), Gaps = 7/429 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M+++G+ P  + FN +     K    D+    F++ + + +  DV ++G LI   C+ G 
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A    NQ+   G +PN+ ++ SL+ G C     E+AK  + ++   G+      +  
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++C L   G         + M+  G  P + +Y  LI  +C  G++ E  K  D M    
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +  TYNTL+ G C+  R+ +A  +  +M   GI+P V+TY+ ++ G        +A 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L+  + ++G+  ++  YN+++   SK      A  L + +  +       T+ I+I + 
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +S   E A  +++ +   G  PDV+TY ++   L  +G ++E   LF++M ++   PN 
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD------GKWPEA 544
            + N ++      G+  RA   L +++EK      ++ +  I +L +D         PE 
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788

Query: 545 EVLLNQMLK 553
             +LN+  K
Sbjct: 789 YRVLNEAKK 797



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 44/366 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++IDA  K    D A+  F+QM++ GV P    FNSL   V   C+ DK W      +
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL---VYGLCTVDK-WEKAKEFY 471

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  DV  F  ++   C  G + KA  +++ +E +G  P V+ YT+LI G C  
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A      +  +GL   + TY  L+ G  + G   D +  + +M  NG++P + TY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 284 NCLIHE-------------YCN---EGK-------------------VSEGFKLFDEMRH 308
           + ++H              Y N    GK                   V E FKLF  +  
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           ++    + T+N +I  L K  R ++A  L   +   G+ P+V TY  + +   + G  ++
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF+ ++ +G +P+    N L+R     G+   A   + +++E+  +    T  +LI 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771

Query: 429 SFVRSD 434
              R +
Sbjct: 772 LLSRDE 777



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 49/249 (19%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG---NSKMASDLVREMEERGI------- 416
           D A +LF+ L ++ +  SV+ +N L+ A S+     +S   S+LV  +  R I       
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF------------------------- 451
           TP   TY+ILI  F R   +E  F  + L+ KSG+                         
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 452 -----------SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK---LEPNDVVYNMMI 497
                      +PDV +Y  L+ G C +   +EA +L + M +++     PN V Y ++I
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+  EG   +A  L  EM ++G+ PN+ +Y++ I  LC+      AE +  QM+  G+K
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 558 PSVSLYNIL 566
           P    YN L
Sbjct: 271 PDNDTYNCL 279



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/236 (19%), Positives = 105/236 (44%), Gaps = 1/236 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y +++  + ++   D A   F +ML +G+ P   T++++L  +  +  F +   L+ +  
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + +++ + I++ G  +   +++AF++   L    F   +  +  +I    K+G  E
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  I   GLV    TY ++   L + G  ++  + +  M+ +G +P+    N L+
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
               + G ++       ++  +  +    T   LI  L ++     A  L ++ ++
Sbjct: 736 RRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 1/167 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSE 166
           +Y  I++   K+   D+A   F  +     +    TFN ++  + KS  + D   LF + 
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   +  DV+++ ++ +   E G L +  ++ + +E+ G +PN  +  +L+      GDI
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            RA     K+ E        T  +LI  L ++          EK ++
Sbjct: 745 TRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 247/538 (45%), Gaps = 27/538 (5%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R  LS +          L  K+ISG   +S F     +  LT++  SS  P   +  Y  
Sbjct: 27  REALSLLEKEEFVPDTVLYTKMISGLCEASLF--EEAMDFLTRMRASSCLPNVLT--YRI 82

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           ++   L      +       M+  G  P    FNSL+    +S  +   +    +  +C 
Sbjct: 83  LLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG 142

Query: 171 VELDVYSFGILIKGCCEAGD-----LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +     + ILI G C + +     L+ A +   ++ E G   N V  ++     C  G 
Sbjct: 143 CQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGK 202

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E+A  + R++   G +    TY+ +I  L      +  F+ +++M+ NG++P +Y Y  
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +C  G + +    FDEM     A NVVTY  LI    K  +V +A  + + M   G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS---------------NGQS--PSVVTY 388
            +PN++TY  LIDG C AG+ +KA +++  +K                +G S  P+V TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             L+    KA   K A DL++ M   G  P+ V Y  LID   ++  +++A E+++ M +
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G+ P+VYTY  LI  L     +  A K+ + M E    PN V+Y  MI G CK G +  
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A +L+  M EKG  PN+ +Y++ I    + G+  +   LL QM   G  P+   Y +L
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 218/468 (46%), Gaps = 23/468 (4%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R++ S++ A+ +S     A     +M+  G +P    +N L+  +  S    K  L  +E
Sbjct: 113 RIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAE 172

Query: 167 N------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                     V L+  +     +  C  G   KA+ V+ ++   GF P+   Y+ +I   
Sbjct: 173 KAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYL 232

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C    +E+A  LF+++   G+    + YT LI    K G  +    ++++M+ +G +P++
Sbjct: 233 CNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNV 292

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LIH Y    KVS+  ++++ M  +    N+VTY  LI GLCK  ++++A ++   
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKI 352

Query: 341 MKMAGIS-----------------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           MK   +                  PNV TY  L+DG C A +  +A  L   +   G  P
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           + V Y+ LI    KAG    A ++   M E G  P+  TY+ LID   +   ++ A ++ 
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           S M ++  +P+V  Y  +I GLC  G   EA KL   M E    PN V Y  MI G+ K 
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKS 532

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           G   + L LL +M+ KG  PN  +Y   I   C  G   EA  LL +M
Sbjct: 533 GRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 208/431 (48%), Gaps = 24/431 (5%)

Query: 123 DQALFYFHQMLDSGV---RPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSF 178
           D A   + +ML++GV   +   + F+  L  + K   F+K +    E   K  + D  ++
Sbjct: 169 DLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGK---FEKAYNVIREMMSKGFIPDTSTY 225

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             +I   C A  + KAF++  +++  G +P+V +YT+LID  CK G IE+A+  F ++  
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G      TYT LI    K+       E YE M   G +P++ TY  LI   C  GK+ +
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345

Query: 299 GFKLFDEMRHREVAC-----------------NVVTYNTLICGLCKEMRVQEAERLLDQM 341
             +++  M+   V                   NV TY  L+ GLCK  +V+EA  LL  M
Sbjct: 346 ASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + G  PN + Y+ LIDG C AG+ D+A  +F  +   G  P+V TY+ LI    K    
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRL 465

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +A  ++ +M E    P+ V YT +ID   +    ++A+++  +M++ G +P+V TY  +
Sbjct: 466 DLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAM 525

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G    G +++  +L   M      PN V Y ++I   C  G    A +LL EM +   
Sbjct: 526 IDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYW 585

Query: 522 VPNIASYSSTI 532
             ++A Y   I
Sbjct: 586 PRHVAGYRKVI 596



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 199/427 (46%), Gaps = 26/427 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
           Y ++I A+LKSR   +A   +  ML  G  P   T+ +L+  + K+   +K    +    
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354

Query: 166 -ENRCKVELD--------------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            EN    ++D              V+++G L+ G C+A  + +A ++L  +   G  PN 
Sbjct: 355 KENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V+Y +LIDGCCK G ++ A+ +F  + E G     +TY+ LI  LFK+       +   K
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  N  +P++  Y  +I   C  GK  E +KL   M  +    NVVTY  +I G  K  R
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V++   LL QM   G +PN +TY  LI+  C  G  D+A +L  ++K       V  Y  
Sbjct: 535 VEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRK 594

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I  F++   + +   L  E+ E    P    Y +LID+F+++  +E A E+    + S 
Sbjct: 595 VIEGFNREFIASLY--LSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNE--ELSS 650

Query: 451 FSP----DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           FSP    +   +  LI  L +     +A +L+  M      P   +   +I G  +    
Sbjct: 651 FSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRW 710

Query: 507 YRALRLL 513
             AL+LL
Sbjct: 711 EEALQLL 717



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 8/294 (2%)

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +T  C  H  C  GK  E   L ++    E   + V Y  +I GLC+    +EA   L +
Sbjct: 11  FTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTR 67

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+ +   PNV+TY  L+ G  +  +  +  R+ + + + G  PS   +N L+ A+ ++G+
Sbjct: 68  MRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGD 127

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRS-----DDMEKAFEMYSLMQKSGFSPDV 455
              A  L+++M + G  P  V Y ILI     S     D ++ A + Y  M ++G   + 
Sbjct: 128 YAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNK 187

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
                    LC  G  ++A  +   M      P+   Y+ +I   C      +A +L  E
Sbjct: 188 VNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE 247

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M   G+ P++  Y++ I   C+ G   +A    ++M + G  P+V  Y  L  A
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ A  K+   D A   F +M + G  P + T+ +++  + K+   D         R
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL--AGR 239

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            K  + VY+   LI G C+ G +  A ++L ++ + G  PNVV Y+ +I+  C +G++E 
Sbjct: 240 FKPSVPVYN--ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G  A  HT+T LI G F  G   +  + ++ M  +G  P++  YN LIH
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ G + E  ++ D+M+      NV TY+ LI G  K   +  A    ++M   G  P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TY  ++D  C     D+A  L  ++   G +P+ +T+N  I+     G  + A  L+
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M+  G  P+  TY  L+D+  R +  E+AF ++  ++     P++ TY  +++G    
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE-KGLVPNIAS 527
           G M EA +LF         P+ + YN MI  YCK+G    A +L+  ++  K   P+I +
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y+S I   C      EA   L++ +  G+ P+ + +N L R
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 225/463 (48%), Gaps = 6/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
           L+  II+ + +   ++QAL  F+++ + G +P    +N LL  ++    F     L+ + 
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  +V+++ IL+K  C+   ++ A ++  ++   G  P+ V YT+++   CK G I
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ L  +        +   Y  LI G+ K G  +   +   +M  NGV P++ +Y+C+
Sbjct: 231 DDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C  G V   F LF +M  R    N+ T+  LI G     ++ EA  L   M   G 
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+ YN LI G C  G  ++A ++ +Q++ +G  P+V TY++LI  F+K+G+   AS+
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
               M   G  P+ VTYT ++D   ++   ++A  +   M   G +P+  T+   I GLC
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++ A KL   M      PN   YN ++    +      A  L  E+  + L PN+ 
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ +    + G   EA  L  + L  G  P    YN +  A
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 190/373 (50%), Gaps = 5/373 (1%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +L Q++  G +    ++  +I+G  + G  E+A  +F +IGE G   T   Y  L+  L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                +     Y  M+ +G+ P+++TYN L+   C   +V    KLF EM ++    + V
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY T++  LCK  ++ +A  L  + K     P+V  YN LIDG C  G  + A +L  ++
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             NG  P+VV+Y+ +I +   +GN ++A  L  +M  RG   +  T+T LI        +
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +A +++ LM + G  P+V  Y  LIHGLC  G+++EA ++ + M  +   PN   Y+++
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+ K G+   A      M   G  PN+ +Y+  + VLC++  + +A  L+ +M   G 
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450

Query: 557 KPSVSLYNILYRA 569
            P+   +N   + 
Sbjct: 451 TPNTITFNTFIKG 463



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 210/415 (50%), Gaps = 2/415 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID   K    + A+    +M+D+GV P   +++ ++  +  S + +  +  F++ 
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +  + ++++F  LIKGC   G L +A ++   + + G  PNVV Y +LI G C NG +
Sbjct: 306 FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSL 365

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  +  ++   G +    TY++LI G  K+G      E + +M  +G  P++ TY C+
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C      +   L ++M       N +T+NT I GLC   RV+ A +LL++M+  G 
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN+ TYN+L+D      + ++AF LF ++++    P++VTYN ++  FS+AG    A  
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGL 465
           L  +   RG  P  +TY  +I ++ +   ++ A ++   +     + PD+ TY  LI G 
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGA 605

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           C   N++EA    +      + PN   +N ++  +         + +L ++  KG
Sbjct: 606 CNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 5/362 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
            F      Y  +I+   +  +++  + + +++   G+   +  +  +I G  + G  +  
Sbjct: 69  AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + ++   G  P++  YN L+    +E K      L+  M+   +  NV TYN L+  
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK  RV  A +L  +M   G  P+ +TY  ++   C AG+ D A  L  + K     PS
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PS 243

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V  YN LI    K G  ++A  L+ EM + G+ P+ V+Y+ +I+S   S ++E AF +++
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G   +++T+  LI G  M+G + EA  L+  M +   EPN V YN +I G C  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL++  +M   G +PN+ +YS  I    + G    A    N+M+  G +P+V  Y 
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 565 IL 566
            +
Sbjct: 424 CM 425



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 5/253 (1%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY  +I  L +E  +   + +L QMKM GI+     +  +I+G+   G  ++A ++F ++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G  P+V  YN L+ A       +M + L   M++ G+ P+  TY IL+ +  ++D +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A +++  M   G  PD  TY  ++  LC  G + +A +L       + +P+  VYN +
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNAL 250

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G CKEG    A++LLGEM + G+ PN+ SYS  I  LC  G    A  L  QM   G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 557 KPSVSLYNILYRA 569
             ++  +  L + 
Sbjct: 311 DANIHTFTPLIKG 323



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 5/293 (1%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           N    +  TY  +I     E ++     +  +M+   + C    +  +I G  +    ++
Sbjct: 68  NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A ++  ++   G  P V  YN L+D      +      L+  +K +G  P+V TYN+L++
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  K      A  L  EM  +G  P  VTYT ++ S  ++  ++ A E+        F P
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKP 242

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            V  Y  LI G+C +G ++ A KL   M +  ++PN V Y+ +I   C  GN   A  L 
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M  +G   NI +++  I      GK  EA  L   M++ G +P+V  YN L
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 5/189 (2%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           SN    +  TY V+I    +     M   ++++M+  GI   E  +  +I+ + R    E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A +M+  + + G  P V  Y  L+  L  +   +  + L+ +M +  L PN   YN+++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              CK      A +L  EM+ KG  P+  +Y++ +  LC+ GK  +A  L  +      K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FK 241

Query: 558 PSVSLYNIL 566
           PSV +YN L
Sbjct: 242 PSVPVYNAL 250



 Score = 45.4 bits (106), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 57/126 (45%)

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           ++   + F     TY V+I  L  +  M     +   M    +   + ++  +I GY + 
Sbjct: 63  AIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRV 122

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G++ +AL++   + E G  P +  Y+  +  L  + K+     L   M K GL P+V  Y
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 564 NILYRA 569
           NIL +A
Sbjct: 183 NILLKA 188


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 230/461 (49%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y SI+  +  S    +A+ +  +M   GV P   T+NSL+ ++ K+  S +   +F S  
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D+ ++  L++G    G L +   +L+ +   G  P+  ++  LI    K   ++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A ++F K+ + GL     TY  +I  L K+G   D   ++E+M   G++P++  Y  LI
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +N++I   CKE RV E+E+L D M   G+ 
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITY+ LIDG+C AG+ D+A +L + + S G  P  VTYN LI  + +      A  L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EM   G++P+ +TY I++     +     A E+Y  + KSG   ++ TY +++HGLC 
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                EA ++F ++  T L+     +N+MI    K G +  A  L    +  GLVPN  +
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y      +   G   E + L   M   G      + N + R
Sbjct: 689 YRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVR 729



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 228/459 (49%), Gaps = 8/459 (1%)

Query: 122 SDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           S +AL   H M D    G  P   ++ +++    K    DK +  + E  +R ++  DV 
Sbjct: 174 SQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-RISPDVV 232

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I   C+   ++KA EVL  + + G  PN + Y S++ G C +   + A    +K+
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY  L+  L KNG   +  + ++ M   G+ P + TY  L+  Y  +G +
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L D M    +  +   +N LIC   K+ +V EA  +  +M+  G++PNV+TY  +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I   C +G  D A   F Q+   G +P+++ Y  LI +         A +L+ EM +RGI
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             + + +  +I S  +   + ++ +++ LM + G  P+V TY  LI G C+ G M EA+K
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L +SM+   ++P+ V YN +I GYC+      AL L  EM   G+ PNI +Y+  +  L 
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNNI 573
              +   A+ L   + K G +  +S YNI+     KNN+
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 203/399 (50%), Gaps = 4/399 (1%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++GILI  CC AG L+  F  L  + + GF    + +T L+ G C +     A
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ EL  +    + T+L+ GL      ++  E    M  +   G +P + +Y  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG   + +  + EM  R ++ +VVTY+++I  LCK   + +A  +L  M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN +TYN ++ G+C + +  +A     +++S+G  P VVTYN L+    K G S  A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   M +RG+ P   TY  L+  +     + +   +  LM ++G  PD + + +LI   
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             +  + EA  +F+ M +  L PN V Y  +I   CK G+   A+    +M ++GL PNI
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             Y+S I  LC   KW +AE L+ +ML  G+  +   +N
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 219/462 (47%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I+   K   SD+A   +H+MLD  + P   T++S++  + K  + DK   +  +  
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  +  ++  ++ G C +    +A   L ++   G  P+VV Y SL+D  CKNG   
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY  L+ G    G   +     + M  NG+ P  + +N LI
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  + KV E   +F +MR   +  NVVTY  +I  LCK   V +A    +QM   G++
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+I Y  LI   C   + DKA  L  ++   G   + + +N +I +  K G    +  L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M   G+ P+ +TY+ LID +  +  M++A ++ S M   G  PD  TY  LI+G C 
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M +A  LF  M  + + PN + YN+++ G      +  A  L   + + G    +++
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  LC++    EA  +   +    L+     +NI+  A
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 227/509 (44%), Gaps = 39/509 (7%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y S++D   K+  S +A   F  M   G+ P 
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVT--YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  +  D + F ILI    +   +++A  V +
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PNVV Y ++I   CK+G ++ A + F ++ + GL      YT LI  L    
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E   +M   G+  +   +N +IH +C EG+V E  KLFD M    V  NV+TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ P+ +TYN LI+G+C     D A  LF ++ S+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+++TYN++++       +  A +L   + + G      TY I++    +++  ++A
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 440 FEMYS-----------------------------------LMQKSGFSPDVYTYGVLIHG 464
             M+                                        +G  P+ +TY ++   
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +  +G ++E  +LF SM +     +  + N ++    + G   RA   L  ++EK     
Sbjct: 696 IIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            ++ S  I +L   GK+ E    L +  K
Sbjct: 756 ASTASLFIDLL-SGGKYQEYHRFLPEKYK 783



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 171/384 (44%), Gaps = 10/384 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++I    KS   D A+ YF QM+D G+ P    + SL+  +   C FDK W     L 
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL---CIFDK-WDKAEELI 464

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  + L+   F  +I   C+ G + ++ ++ + +  +G  PNV+ Y++LIDG C  
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A  L   +  +G+     TY  LI G  +     D    +++M  +GVSP++ TY
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++    +  + +   +L+  +        + TYN ++ GLCK     EA R+   + +
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             +     T+N +I      G  D+A  LF    SNG  P+  TY ++       G  + 
Sbjct: 645 TDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
              L   ME+ G T        ++   ++  ++ +A    S++ +  FS +  T  + I 
Sbjct: 705 LDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764

Query: 464 GLCMKGNMKEASKLFNSMWETKLE 487
            L   G  +E  +     +++ +E
Sbjct: 765 -LLSGGKYQEYHRFLPEKYKSFIE 787



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 10/279 (3%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---ISPNVITYNKLID 358
           +FDE+  R    ++   N  +  + +        R  ++M  AG   ++P V TY  LI 
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYGILIG 95

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV-REMEERGIT 417
             C AG  D  F     +   G     +T+  L++       +  A D+V R M E    
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLM---QKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           P   + TIL+      +  ++A E+  +M   +  G +PDV +Y  +I+G   +G+  +A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
              ++ M + ++ P+ V Y+ +I   CK     +A+ +L  M + G++PN  +Y+S +  
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL--YRAKN 571
            C   +  EA   L +M   G++P V  YN L  Y  KN
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 228/493 (46%), Gaps = 39/493 (7%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NR 168
           +I       L D+AL ++   +      P   + NSLL  ++K    +     + E  +R
Sbjct: 107 VISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDR 166

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              E+D Y+  I++KG C+ G +   ++++ +    G  PN+V Y +LIDG CK GD ER
Sbjct: 167 -NGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTER 225

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGL--------------------------------- 255
           A +LF+++   G + T  TY  +I G                                  
Sbjct: 226 ANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIID 285

Query: 256 --FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
             FK+G + +  +    M  +G  P + TYN LI   C+ G+V +  +L ++   R +  
Sbjct: 286 AQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLP 345

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N V+Y  LI   CK+     A  LL +M   G  P+++TY  LI G   AGE D A  + 
Sbjct: 346 NKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           N++   G  P    YNVL+    K G    A  L+ EM ++ + P       L+D F+R 
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRH 465

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D E+A +++ L  + G  P V  Y  +I G C  G MK+A   F  M +    P++  Y
Sbjct: 466 GDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTY 525

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + +I GY K  + + ALR+ G M +    PN+ +Y+  I   C  G    AE    QML 
Sbjct: 526 STIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLS 585

Query: 554 LGLKPSVSLYNIL 566
           L LKP+V  Y IL
Sbjct: 586 LRLKPNVVTYTIL 598



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 209/425 (49%), Gaps = 5/425 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFF 164
            Y ++ID + K   +++A   F ++   G  P   T+ +++    K   F   DK  +  
Sbjct: 209 FYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEM 268

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           SE    V + +Y+   +I    + G   +A + +  + + G  P++  Y  LI G C  G
Sbjct: 269 SERGLDVSIHIYNN--IIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCG 326

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           ++ +A+ L  +  + GL+  + +YT LI    K G      +   KM   G  P L TY 
Sbjct: 327 EVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYA 386

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH     G+V     + ++M  + V  +   YN L+ GLCK+ R+  A+ LL +M   
Sbjct: 387 ALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            ++P+      L+DGF   G+ ++A +LF      G  P VV YN +I+ + K G  K A
Sbjct: 447 NVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDA 506

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
               + M +   +P E TY+ +ID +++ +D+  A  M+ LM K    P+V TY +LI+G
Sbjct: 507 LLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C+ G++  A K F  M   +L+PN V Y ++I  +CK  N  +A     +M  +  +PN
Sbjct: 567 FCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPN 626

Query: 525 IASYS 529
             +Y+
Sbjct: 627 DVTYN 631



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 180/327 (55%), Gaps = 1/327 (0%)

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEK-MQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           L+ T+  ++++I      GL     EFY   ++++   P +++ N L++     GKV   
Sbjct: 97  LMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIA 156

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            K++DEM  R    +  T   ++ GLCKE +V++  +L+++    G  PN++ YN LIDG
Sbjct: 157 CKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDG 216

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C  G+T++A  LF +LK  G  P+V TY  +I  F K G  ++   L+ EM ERG+  S
Sbjct: 217 YCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVS 276

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y  +ID+  +     +A +    M KSG  PD+ TY +LI G C  G + +A +L  
Sbjct: 277 IHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLE 336

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
              +  L PN V Y  +I  YCK+G   RAL LL +M+E+G  P++ +Y++ I  L   G
Sbjct: 337 QAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAG 396

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   A  + N+M++ G+ P  ++YN+L
Sbjct: 397 EVDVALTVRNKMVEKGVLPDANIYNVL 423



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 197/394 (50%), Gaps = 1/394 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +F ++I    + G +++A E      ++    P+V    SL++   K+G +E A  ++ +
Sbjct: 103 AFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDE 162

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +       +T  +++ GL K G  +DG++  EK    G  P++  YN LI  YC +G 
Sbjct: 163 MVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGD 222

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
                 LF E++ +     V TY  +I G CK+ + +  ++LL +M   G+  ++  YN 
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNN 282

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID     G   +A      +  +G  P + TYN+LI      G    A  L+ +  +RG
Sbjct: 283 IIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRG 342

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P++V+YT LI ++ +  +  +A ++   M + G  PD+ TY  LIHGL + G +  A 
Sbjct: 343 LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVAL 402

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            + N M E  + P+  +YN+++ G CK+G    A  LL EM ++ + P+    ++ +   
Sbjct: 403 TVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGF 462

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + G + EA+ L    ++ G+ P V  YN + + 
Sbjct: 463 IRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKG 496



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 199/499 (39%), Gaps = 89/499 (17%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS---------- 156
            +Y +IIDA  K     +A      M+ SG  P   T+N   I +  SCS          
Sbjct: 278 HIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYN---ILITGSCSCGEVHKAEQL 334

Query: 157 ----FDKGWLF-------FSENRCK-------VEL-----------DVYSFGILIKGCCE 187
                 +G L           N CK       ++L           D+ ++  LI G   
Sbjct: 335 LEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIV 394

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG+++ A  V N++ E G  P+  IY  L+ G CK G +  AK+L  ++ +  +      
Sbjct: 395 AGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFI 454

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
              L+ G  ++G  ++  + +E     G+ P +  YN +I  YC  G + +    F  M 
Sbjct: 455 TATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI 514

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
               + +  TY+T+I G  K   +  A R+   M      PNV+TY  LI+GFC +G+ +
Sbjct: 515 QGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDIN 574

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A + F Q+ S    P+VVTY +LI  F K  N   A     +M      P++VTY  L+
Sbjct: 575 RAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634

Query: 428 DSFVRSDD-----------------------------------------------MEKAF 440
           +    + D                                               ++ A 
Sbjct: 635 NGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHAL 694

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M   GF PD  +   L+HGLC++G  ++ + + +     +     V Y+  +  +
Sbjct: 695 HLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAF 754

Query: 501 CKEGNSYRALRLLGEMNEK 519
             +G +  A  +L  + ++
Sbjct: 755 LSQGQTSEASLILHSLADQ 773



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ-LKSNGQSPSVVTYNVL 391
           E E LL  MK   + P    ++ +I  F D G  D+A   +   +K +   P V + N L
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143

Query: 392 IRAFSKAGNSKMASDLVREMEE-----------------------------------RGI 416
           +    K G  ++A  +  EM +                                   RG 
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ V Y  LID + +  D E+A  ++  ++  GF P V TYG +I+G C KG  +   K
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L   M E  L+ +  +YN +I    K G    A   +G M + G  P++A+Y+  I   C
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC 323

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             G+  +AE LL Q +K GL P+   Y  L
Sbjct: 324 SCGEVHKAEQLLEQAIKRGLLPNKVSYTPL 353



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE-MEERGITPSEVTYTILIDSF 430
           L   +KS    P+   ++++I  F+  G    A +  R  ++     P   +   L++  
Sbjct: 88  LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           V+   +E A ++Y  M       D YT  +++ GLC +G +++  KL    W     PN 
Sbjct: 148 VKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNI 207

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I GYCK+G++ RA  L  E+  KG +P + +Y + I   C+ GK+   + LL +
Sbjct: 208 VFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVE 267

Query: 551 MLKLGLKPSVSLYNILYRAK 570
           M + GL  S+ +YN +  A+
Sbjct: 268 MSERGLDVSIHIYNNIIDAQ 287


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 266/586 (45%), Gaps = 49/586 (8%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSIS---IILRLLLSKMSSHSHAAAQTLI 70
           ++L+ R  +L P  +   F  AS+Q  +  P   S   I+  L  ++M          L+
Sbjct: 101 MDLVLRNLRLNPDASLEFFKLASKQP-KFRPDVSSYCKIVHILSRARMYKEVRVYLNELV 159

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           +   +  I S+ +        L  ++   S   T   +++ I+    +  ++  AL  F 
Sbjct: 160 VLCKNNYIASAVWD------ELVSVYREFSFSPT---VFDMILKVFAEKGMTKFALCVFD 210

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAG 189
            M   G  P   + NSLL  ++++    K  L + +     +  D++S+ I++   C+ G
Sbjct: 211 NMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEG 270

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +++AF  + ++E     PNVV Y SLIDG    GD+  AK +   + E G+     TYT
Sbjct: 271 RVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYT 330

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI G  K G  +   +    M    +    + Y  LIH YC  G+V +  ++ D M   
Sbjct: 331 LLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N V  N+LI G CK   V +A  +L  MK   + P+   YN L+DGFC   +  KA
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F+L +++ + G + +VVTYN L++     G+ + A  +   M +RG+ P+EVTY  L+D+
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +    ++A  ++      GF+  +  Y  +I G C    + +A ++F  M E    P+
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPD 570

Query: 490 DVVYNMMIFGYCKEGNSYRALR-----------------------------------LLG 514
           ++ Y  +I GYCK GN   AL+                                   LL 
Sbjct: 571 EITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLA 630

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           EM  + L PN+ +Y S I   C  G   +A     +M+  G+ P++
Sbjct: 631 EMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNI 676



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 226/493 (45%), Gaps = 38/493 (7%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I+ + K    ++A      M D  ++P S  +N+LL    K   F K +    E   K
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V   V ++  L+K     G +  A  + N + + G +PN V Y +L+D   K G  +RA
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            M+++     G   +   Y  +ICG  K        E + KM+  G  P   TY  LI  
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  G + E  KL D      ++ +   YN+LI G+ +   +Q+   LL +MK   +SPN
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA----- 404
           V+TY  LI G+CD G  DKA+  + ++   G +P+++  + ++ +  + G    A     
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILH 700

Query: 405 -------------------SDLVREMEERGITPS------------EVTYTILIDSFVRS 433
                              SDL R +E + I  S             + Y I I    +S
Sbjct: 701 QIADIDPIAAHAHSVELPKSDL-RHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +++    + S +   GF PD YTY  LIH     G + EA  L + M    L PN VVY
Sbjct: 760 KNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVY 819

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G CK GN  RA RL  ++  KGL P + +Y++ I   C+ G+  EA  L ++M +
Sbjct: 820 NALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMRE 879

Query: 554 LGLKPSVSLYNIL 566
            G+ PS   Y+ L
Sbjct: 880 EGICPSSITYSTL 892



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 39/366 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--GWLFFSE 166
           Y ++ID + K     +AL         G+   +  +NSL+  V +S    K  G L   +
Sbjct: 574 YRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMK 633

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR ++  +V ++G LI G C+ G ++KA+    ++ + G +PN++I + ++    ++G I
Sbjct: 634 NR-ELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692

Query: 227 ERAKMLFRKIGELGLVATQH-----------------------------------TYTVL 251
           + A ++  +I ++  +A                                       Y + 
Sbjct: 693 DEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIA 752

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I GL K+    D       + L G  P  YTY  LIH     GKV+E F L D+M +  +
Sbjct: 753 ITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGL 812

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             N+V YN LI GLCK   +  A RL +++   G+SP V+TYN LIDG+C  G T +A  
Sbjct: 813 VPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALE 872

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L ++++  G  PS +TY+ LI      G S+ +  L+ EM + G   S V   ++  ++V
Sbjct: 873 LKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG-KGSSVMDPLVARAYV 931

Query: 432 RSDDME 437
           +  D +
Sbjct: 932 KWRDKQ 937



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 185/433 (42%), Gaps = 71/433 (16%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           + AL  ++ M   GV P   T+ +LL    K  +FD+  + + +   K     +  +  +
Sbjct: 483 EHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+   L +A E+  +++E+GF P+ + Y +LIDG CK G++  A  L       G+
Sbjct: 543 ICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602

Query: 242 VATQHTYTVLICGLFKN-----------------------------------GLQKDGFE 266
            ++   Y  LI G+F++                                   G+    + 
Sbjct: 603 SSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYN 662

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF--------------------DEM 306
            Y KM   G++P++   + ++      GK+ E   +                      ++
Sbjct: 663 AYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDL 722

Query: 307 RHREVA---------------CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           RH E                  N + YN  I GLCK   + +  R+L  + + G  P+  
Sbjct: 723 RHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNY 782

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  LI      G+ ++AF L + + + G  P++V YN LI    K+GN   A  L  ++
Sbjct: 783 TYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKL 842

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +G++P+ VTY  LID + +     +A E+   M++ G  P   TY  LIHGL M+G  
Sbjct: 843 ARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKS 902

Query: 472 KEASKLFNSMWET 484
           +++  L N M + 
Sbjct: 903 EQSVGLLNEMMKA 915



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 155/313 (49%)

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           + G+ K     ++ M   G  PSL + N L+      G+  +   ++++M    +  ++ 
Sbjct: 198 EKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIF 257

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           +Y  ++   CKE RV EA   + +M+ +   PNV+TYN LIDG+   G+   A ++   +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G   +  TY +LI+ + K G  + A  L+  M E+ +   E  Y +LI ++  +  +
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRV 377

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A  +   M K G   +      LI+G C  G++ +A+++  SM +  L+P+   YN +
Sbjct: 378 DDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTL 437

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + G+CK+ +  +A +L  EM+ KG+   + +Y++ +  L   G    A  + N M K G+
Sbjct: 438 LDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGV 497

Query: 557 KPSVSLYNILYRA 569
            P+   Y  L  A
Sbjct: 498 APNEVTYCTLLDA 510



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 114/270 (42%), Gaps = 46/270 (17%)

Query: 49  IILRLLLSKMSSHSHAAAQTLILKIIS-----GRITSSSFTPRSLLCHL-TQLFPSS--- 99
           II   ++S +  H       LIL  I+          S   P+S L HL TQ    S   
Sbjct: 677 IIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGK 736

Query: 100 ---SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
              S P++ + +Y   I    KS+  D        +L  G  P                 
Sbjct: 737 KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCP----------------- 779

Query: 157 FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
                            D Y++  LI  C   G +N+AF + + +   G  PN+V+Y +L
Sbjct: 780 -----------------DNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNAL 822

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I+G CK+G+++RA+ LF K+   GL  T  TY  LI G  K G   +  E  +KM+  G+
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            PS  TY+ LIH    EGK  +   L +EM
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/468 (32%), Positives = 231/468 (49%), Gaps = 7/468 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFF 164
           Y  +ID  LK +    A+  + ++L DS V P   T N ++  + K    D   K W   
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            +N  + E D+Y++  LI G C+AG+++KA  V N+L+E   S +VV Y +++ G C+ G
Sbjct: 282 KQN--EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ +  L+R I E        +Y +LI GL +NG   +    +  M   G +    TY 
Sbjct: 340 KIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             IH  C  G V++   +  E+       +V  Y ++I  LCK+ R++EA  L+ +M   
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+  N    N LI G        +A     ++  NG  P+VV+YN+LI    KAG    A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           S  V+EM E G  P   TY+IL+    R   ++ A E++    +SG   DV  + +LIHG
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC  G + +A  +  +M       N V YN ++ G+ K G+S RA  + G M + GL P+
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           I SY++ +  LC       A    +     G+ P+V  +NIL RA  N
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 275/565 (48%), Gaps = 35/565 (6%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTL-----------IL 71
           P  AF+LF+ A+R  G  H+      ILR L  ++M +H     + +            L
Sbjct: 23  PRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVAL 82

Query: 72  KIISGRITSSSFTPRSL--LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR--LSDQALF 127
            +I      +S   ++L     + ++F     P  +S  Y ++++A ++++  +  ++LF
Sbjct: 83  SVIK-TYGKNSMPDQALDVFKRMREIF--GCEPAIRS--YNTLLNAFVEAKQWVKVESLF 137

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-----WLFFSENRCKVELDVYSFGILI 182
            + +   +GV P   T+N L+    K   F+K      W++    +   + DV+S+  +I
Sbjct: 138 AYFET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW----KEGFKPDVFSYSTVI 191

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
               +AG L+ A E+ +++ E G +P+V  Y  LIDG  K  D + A  L+ ++ E   V
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251

Query: 243 -ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                T+ ++I GL K G   D  + +E+M+ N     LYTY+ LIH  C+ G V +   
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F+E+  R+ + +VVTYNT++ G C+  +++E+  L   M+    S N+++YN LI G  
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLL 370

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           + G+ D+A  ++  + + G +    TY + I      G    A  +++E+E  G      
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y  +ID   +   +E+A  +   M K G   + +    LI GL     + EAS     M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +    P  V YN++I G CK G    A   + EM E G  P++ +YS  +  LC+D K 
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L +Q L+ GL+  V ++NIL
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNIL 575


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 245/459 (53%), Gaps = 4/459 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NR 168
           S I A+ K  + DQAL  F  M+D  G  P   +FNS+L   I+S  + +  LFF+    
Sbjct: 83  SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT 142

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +  ++ ++ ILIK  C+     K   +L  + E G +P+++ Y +LI+   K+G++  
Sbjct: 143 AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLD 202

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-NGVSPSLYTYNCLI 287
           A  LF ++   G+      Y +LI G  + G      E ++++   + V PS+ TYN +I
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMI 262

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK+ E  ++++ M+  E + ++ T++++I GL K      AE++  +M  +G+S
Sbjct: 263 NGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V TYN ++ G    G+ +K F L+N +  N    ++V+YN+LI+        + A   
Sbjct: 323 PDVRTYNAMLSGLFRTGKLNKCFELWNVMSKN-NCCNIVSYNMLIQGLLDNKKVEQAICY 381

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            + + ERG+     TY +LI+   ++  + KA  +    +  G   D + Y  ++HGLC 
Sbjct: 382 WQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCK 441

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           KG +++A +L + M + + + N  V+N +I GY +      A+ +L EM  K   P + S
Sbjct: 442 KGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVS 501

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I  LC+  ++ +A + L +ML+ GLKP +  Y++L
Sbjct: 502 YNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 246/516 (47%), Gaps = 42/516 (8%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           LT +F +  NP   S  Y ++I+A  KS     A+  F +M   GV P    +N L+   
Sbjct: 172 LTWMFENGLNPDILS--YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGF 229

Query: 152 IKSCSFDKGWLFFSENRCKVELDVY----SFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
           ++   F K    +   R   E  VY    ++ I+I G C+ G L+++ E+ N++++   S
Sbjct: 230 LRKGDFVKANEIWK--RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS 287

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P++  ++S+I G  K G+   A+ +F+++ E GL     TY  ++ GLF+ G     FE 
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347

Query: 268 YEKMQLN----------------------------------GVSPSLYTYNCLIHEYCNE 293
           +  M  N                                  G+     TY  LI+  C  
Sbjct: 348 WNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +++  ++ +E  +     +   Y++++ GLCK+  +++A  L+ QMK      N   +
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G+  A + ++A  +  ++KS   +P+VV+YN +I    KA     A   ++EM E
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  +TY++LID   R + ++ A  ++         PD+  + ++IHGLC    +  
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++F  M +    P+ V +N ++ G  K G+   AL++   + E GL P+I SY+ T  
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LC   +  +A   L   L  G+ P+   +N+L RA
Sbjct: 648 GLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRA 683



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 152/638 (23%), Positives = 284/638 (44%), Gaps = 97/638 (15%)

Query: 21  AKLPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSK------------MSSHSHAAAQ 67
           A+  P  A ++F+ A +  G  H P     ILR L+              M +     ++
Sbjct: 19  AEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSE 78

Query: 68  TLILKIISGRITSS-SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
            + L  I      S      +L  ++  +F    NP  +S  + S+++A ++S    +A 
Sbjct: 79  DVALSAIKAYAKCSMPDQALNLFQNMVDIF--GCNPGIRS--FNSMLNAFIESNQWREAE 134

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-----WLFFSENRCKVELDVYSFGIL 181
            +F     +G+ P   T+N L+    K   F+KG     W+F  EN   +  D+ S+G L
Sbjct: 135 LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMF--EN--GLNPDILSYGTL 190

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELG 240
           I    ++G+L  A E+ +++   G +P+V+ Y  LIDG  + GD  +A  ++++ + E  
Sbjct: 191 INALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESS 250

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  +  TY ++I GL K G   +  E + +M+ N  SP L+T++ +IH     G  +   
Sbjct: 251 VYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAE 310

Query: 301 KLFDEM----------------------------------RHREVACNVVTYNTLICGLC 326
           K+F EM                                    +   CN+V+YN LI GL 
Sbjct: 311 KVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLL 370

Query: 327 KEMRVQEA-----------------------------------ERLLDQMKMAGISPNVI 351
              +V++A                                    R+L++ +  G   +  
Sbjct: 371 DNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTF 430

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y+ ++ G C  G  ++A  L +Q+K N +  +   +N LI  + +A   + A  ++REM
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM 490

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           + +   P+ V+Y  +I+   +++    A+     M + G  PD+ TY +LI GLC    +
Sbjct: 491 KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKV 550

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A  L++     +L+P+  ++N++I G C       AL +  +M +   VP++ ++++ 
Sbjct: 551 DMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTI 610

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  L + G   EA  + +++L+ GL+P +  YNI ++ 
Sbjct: 611 MEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 221/454 (48%), Gaps = 10/454 (2%)

Query: 103 VTKSRLYESI------IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           +T+S +Y S+      I+   K    D+++  +++M  +   P   TF+S++  + K+ +
Sbjct: 246 LTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGN 305

Query: 157 FDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           F+     F E     +  DV ++  ++ G    G LNK FE+ N + +     N+V Y  
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNM 364

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI G   N  +E+A   ++ + E GL A   TY +LI GL KNG         E+ +  G
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                + Y+ ++H  C +G + +  +L  +M+      N   +N+LI G  +  +++EA 
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            +L +MK    +P V++YN +I+G C A     A+    ++   G  P ++TY++LI   
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            +     MA +L  +   + + P    + I+I     +  ++ A E+++ M++    PD+
Sbjct: 545 CRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDL 604

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            T+  ++ GL   G+  EA K+++ + E  L+P+ + YN+   G C       A+  L +
Sbjct: 605 VTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYD 664

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
             ++G++PN  +++  +  +  D   P  E  LN
Sbjct: 665 ALDRGILPNAPTWNVLVRAVVDDK--PLMEYALN 696


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 214/435 (49%), Gaps = 35/435 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++ ++  LI   C AGD+  A + L  L   G +P+   YTS + G C+ G +  A  +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-------------------- 273
             +   G + T  TYT L+ GL   G+ ++    +  M+                     
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 274 ---------------NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                          NG  P++  YN LI  YCN G++    K+F+ M     + NV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             LI GLCK  +V+ A  L  +M  AG+ PNV+TY  LI G C+ G    AFRL + +++
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           NG  P+  T++VLI A  K    + A   +  + ++G+  +EV YT LID   ++  ++ 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+   M   GF PD ++Y  LI GLC +  + +A+ +   M E  ++ + V Y ++I 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
              +E  S    ++  +M   G+ P+I +Y+  +   C++G+  +AE ++ QM+  G+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 559 SVSLYNILYRAKNNI 573
           ++  YN L R   N+
Sbjct: 491 NLVTYNTLIRGYANL 505



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 244/521 (46%), Gaps = 19/521 (3%)

Query: 12  LTLNLISRMAKLPPLKAF-SLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLI 70
           L+  ++S  A LPPL+   +L    +R  +    +S++       S+M + +     TLI
Sbjct: 27  LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLA-------SRMPARNLRTYTTLI 79

Query: 71  -LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
               ++G I ++         HLT L  +   P   S  Y S +  + ++ +   A   F
Sbjct: 80  NAYCLAGDIPAAKQ-------HLTSLLHAGLAP--DSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEA 188
             M   G    + T+ +LL  ++ +    +    F   R      D + +  ++ G CEA
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G   +A  +L +    GF PN+V+Y +LIDG C  G++E A  +F  +          TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T LI GL K+G  +     + +M   G+ P++ TY  LI   CNEG +   F+L   M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  N  T++ LI  LCK  +V+EA+  L  +   G+  N + Y  LIDG C  G+ D 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  ++ S G  P   +Y+ LI    +      A+ ++ +M E+GI  S VTYTI+ID
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             VR    E   +++  M  +G +PD+ TY V +   C +G M++A  +   M +  + P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           N V YN +I GY   G   +A      M  KG  PN  SY+
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 193/375 (51%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++ F  +  L     + N+  YT+LI+  C  GDI  AK     +   GL    + YT  
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + G  + G+       +  M L G   + +TY  L+H     G V E   +F  MR    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSC 173

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A +   Y T++ GLC+  R +EAE LL++    G  PN++ YN LIDG+C+AGE + A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +F  +  N  SP+V TY  LI    K+G  + A  L   M E G+ P+ VTYT LI    
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC 293

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
               ++ AF +  LM+ +G  P+ +T+ VLI  LC +  ++EA     S+ +  ++ N+V
Sbjct: 294 NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEV 353

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           VY  +I G CK G    A  L+ +M  +G VP+  SYSS I  LC+  K  +A ++L  M
Sbjct: 354 VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413

Query: 552 LKLGLKPSVSLYNIL 566
           ++ G++ S   Y I+
Sbjct: 414 MEKGIQASPVTYTII 428



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 187/405 (46%), Gaps = 12/405 (2%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E ++  +  LI G C AG++  A +V   ++    SPNV  YT LI G CK+G +ERA +
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF ++ E GL     TYT LI G    G  +  F     M+ NG+ P+ +T++ LI   C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
              KV E       +  + V  N V Y +LI GLCK  ++  A+ L+ +M   G  P+  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y+ LIDG C   +  +A  +   +   G   S VTY ++I    +   S+    +  +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              GI P  VTYT+ + S+     ME A  M   M   G  P++ TY  LI G    G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR------------LLGEMNEK 519
            +A   F  M     +PN+  Y +++    K+ +S  ++             LL ++ E+
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L      YS  I  LC+  +  EA+     M    L PS  +Y 
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 17/405 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID +  +   + AL  F  M  +   P   T+  L+  + KS   ++  + FS  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +E +V ++  LI+G C  G L  AF +L+ +E  G  PN   ++ LID  CK   +
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++    + + G+   +  YT LI GL K G      E  +KM   G  P  ++Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C + K+S+   + ++M  + +  + VTY  +I  L +E+  +  +++ D+M   GI
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+++TY   +  +C+ G  + A  +  Q+   G  P++VTYN LIR ++  G    A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 407 LVREMEERGITPSEVTYTILIDSFVR------SDDMEKAFEMYSLM--------QKSGFS 452
               M  +G  P+E +YT+L+   V+      S D+ K  +M  L         ++   +
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            D+Y+    I  LC    ++EA   F  M    L P++ VY  +I
Sbjct: 574 ADIYS--CFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 164/373 (43%), Gaps = 54/373 (14%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK----SCSFDKGWL 162
           R Y  +I    KS   ++A+  F +M+++G+ P   T+ +L+          C+F    L
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR--LL 305

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
              E    V  D ++F +LI   C+   + +A   L  L + G   N V+YTSLIDG CK
Sbjct: 306 HLMETNGLVPND-WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G I+ A  L +K+   G V   H+Y+ LI GL +           E M   G+  S  T
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  +I E   E       K+FD+M    +  ++VTY   +   C+E R+++AE ++ QM 
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN++TYN LI G+ + G   +AF  F  +   G  P+  +Y VL+R   K  +S 
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 403 MASD------------LVREMEER-----------------------------------G 415
            + D            L+ ++ ER                                    
Sbjct: 545 NSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604

Query: 416 ITPSEVTYTILID 428
           +TPSE  YT +ID
Sbjct: 605 LTPSEDVYTSIID 617



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTL+  L +     + E L  +M     + N+ TY  LI+ +C AG+   A +    L  
Sbjct: 45  NTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P    Y   +  + +AG    A  +   M  RG   +  TYT L+   + +  + +
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  ++  M+    +PD + Y  ++HGLC  G  +EA  L         EPN VVYN +I 
Sbjct: 161 AMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC  G    AL++   M+     PN+ +Y+  I  LC+ GK   A VL ++M++ GL+P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 559 SVSLYNILYRAKNN 572
           +V  Y  L + + N
Sbjct: 281 NVVTYTALIQGQCN 294



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%)

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F   + +  R  A N+ TY TLI   C    +  A++ L  +  AG++P+   Y   + G
Sbjct: 57  FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C AG    A R+F  +   G   +  TY  L+     AG  + A  +   M      P 
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y  ++     +   E+A  +      +GF P++  Y  LI G C  G M+ A K+F 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M   +  PN   Y  +I G CK G   RA+ L   M E GL PN+ +Y++ I   C +G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               A  LL+ M   GL P+   +++L  A
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 127/337 (37%), Gaps = 83/337 (24%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
           Y ++I           A    H M  +G+ P   TF+ L+  + K    ++  LF  S  
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V+++   +  LI G C+ G ++ A E++ ++   GF P+   Y+SLIDG C+   + 
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKN----------------------------- 258
           +A ++   + E G+ A+  TYT++I  L +                              
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 259 ------GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM------ 306
                 G  +D      +M   GV P+L TYN LI  Y N G VS+ F  F+ M      
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK 524

Query: 307 -----------------------------------------RHREVACNVVTYNTLICGL 325
                                                      R++      Y+  I  L
Sbjct: 525 PNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCL 584

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           C+  R++EA+     M+ A ++P+   Y  +ID   D
Sbjct: 585 CRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCAD 621


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 182/338 (53%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
            + +I + G     +T+ VL+  L K G  KD    +++++  G+ P+  ++N LI+ YC
Sbjct: 219 FYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYC 278

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G + EGF+L   M    V  +V TY+ LI GLCKE ++++A  L  +M   G+ PN +
Sbjct: 279 KSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDV 338

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T+  LI+G C  G  D A  ++ Q+ + G    +V YN LI    K G  + A   V EM
Sbjct: 339 TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEM 398

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG+ P + TYT L+D   +  D+E A EM   M K G   D   +  +I GLC  G +
Sbjct: 399 TKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKI 458

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A +    M    L+P+D  Y M++ G+CK+G+     +LL EM   G +P + +Y+  
Sbjct: 459 VDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVL 518

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  LC+ G+   A++LLN ML LG+ P    YNIL + 
Sbjct: 519 MNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 255/526 (48%), Gaps = 27/526 (5%)

Query: 23  LPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS--GRIT 79
           LPP    S F++ +S     HT QS   ++  L++   +     A++L+  ++S  G+ +
Sbjct: 88  LPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQ---AESLLHFVVSRKGKGS 144

Query: 80  SSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           +SS     L          +   ++ S ++++++  + +      A+  F       ++ 
Sbjct: 145 ASSVFASIL---------ETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKI 195

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
             N    LL  +IK  S      F+ E        +VY+F +L+   C+ G +  A  + 
Sbjct: 196 PFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIF 255

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           +++ + G  P  V + +LI+G CK+G++E    L   + E  +     TY+ LI GL K 
Sbjct: 256 DEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKE 315

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
              +D    +++M   G+ P+  T+  LI+  C  G+V    +++ +M  + +  ++V Y
Sbjct: 316 CQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLY 375

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           NTLI GLCK    +EA + + +M   G+ P+  TY  L+DG C  G+ + A  +  ++  
Sbjct: 376 NTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVK 435

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G     V +  +I    + G    A   +REM   G+ P + TYT+++D F +  D++ 
Sbjct: 436 EGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKM 495

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            F++   MQ  G  P V TY VL++GLC +G +K A  L N+M    + P+D+ YN+++ 
Sbjct: 496 GFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQ 555

Query: 499 GYCKEGNSYRALRLLGEM----NEKGLVPNIASYSSTIGVLCQDGK 540
           G+CK G        LG+      E GLV + ASY S +  L +  K
Sbjct: 556 GHCKHGK-------LGDFQNVKTEMGLVSDYASYRSLLHELSKASK 594


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 227/459 (49%), Gaps = 3/459 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           +++  +A+  F+Q+     +P +  +NS++I +I    ++K    ++E  N    + D  
Sbjct: 172 AKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTV 231

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C+ G  + A  +LN+++E G  P   IYT +I    K  ++  A  LF ++
Sbjct: 232 TYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM 291

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             +       TYT LI GL K G   + + FY +MQ  G  P     N +I+     G++
Sbjct: 292 RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRL 351

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
            +G KLF+EM       NVVTYNT+I  L + + RV E     ++MK +GISP+  TY+ 
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSI 411

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGFC     +KA  L  ++   G  P    Y  LI A  KA    +A +L +E++E  
Sbjct: 412 LIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            + S   Y ++I    ++  ++ A  ++  M K G +P+VY Y  L+ GL     + EA 
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                M E    P+   YN+++ G  K G  +RA+ +L  M    + P+  SY++ +  L
Sbjct: 532 TTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSAL 591

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 592 SHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVD 630



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 21/246 (8%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMSSHSHAAAQTLILKII 74
           + FS F      G+  +P + SI++             +LL +M              +I
Sbjct: 389 EVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLI 448

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
                +  +    L C L Q    +    + +R+Y  +I    K+   D A+  F +M  
Sbjct: 449 DALGKAKRY---DLACELFQELKENCGS-SSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGCCEAGDL 191
            G  P    +N+L+  + ++C  D+         E+ C    D+ S+ I++ G  + G  
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP--DINSYNIILNGLAKTGGP 562

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++A E+L  ++     P+ V Y +++      G  E A  L +++  LG      TY+ +
Sbjct: 563 HRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSI 622

Query: 252 ICGLFK 257
           +  + K
Sbjct: 623 LEAIGK 628


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 262/565 (46%), Gaps = 19/565 (3%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQS---ISIILRLLLSKMSSHSHAAAQT 68
           LT++L  + A+L P   FS    +S      TP +   +SI  ++  S+    S+     
Sbjct: 12  LTISL-HKPARLSPFFYFSSLPLSS----NSTPDAQNELSISPQIFKSRPQFGSYKLGDA 66

Query: 69  LILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
              ++I    TS  F       H           V    ++  I  A  K+ L  +A+ +
Sbjct: 67  TFYRLIENYATSREFH----FIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNF 122

Query: 129 FHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----FSENRCKVELDVYSFGILIK 183
           FH+M  D   +    +FNS+L  +I+   F   + F    F  N    + ++ ++ ++IK
Sbjct: 123 FHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIK 182

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C+ G +++A +   ++     +P+V  Y++L++G CK   ++ A  L  ++   G + 
Sbjct: 183 ALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLP 242

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+ VLI  L KNG      +  + M L G  P+  TYN LIH  C +GK+ +   L 
Sbjct: 243 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 302

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           ++M   +   N VTY T+I GL K+ R ++   +L  M+  G   N   Y+ LI G    
Sbjct: 303 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 362

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+++ A RL+ ++   G  P+VV Y   I    +      A D+++EM  +G  P+  TY
Sbjct: 363 GKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTY 422

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + L+  F +  D +KA  ++  M       +V    VL++GLC  G ++EA  ++  M  
Sbjct: 423 SSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLG 482

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM--NEKGLVPNIASYSSTIGVLCQDGKW 541
             L+P+ V Y+ MI G C  G+  + L+L  EM   E    P++ +Y+     LC+    
Sbjct: 483 EGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNL 542

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  LLN ML  G  P     NI 
Sbjct: 543 TRAIDLLNSMLDEGCDPDSLTCNIF 567



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 202/459 (44%), Gaps = 48/459 (10%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL------FFSE--NRCKVEL 173
           + +   + HQ+LD   R       ++ I + K+C   K  L      FF    N    + 
Sbjct: 77  TSREFHFIHQVLDRMKREGRVLTETIFILIFKACG--KAHLPGEAVNFFHRMANDLHCKQ 134

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            V SF  ++    + GD + AF+    +      GF PN++ Y  +I   CK G I+RA 
Sbjct: 135 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRA- 193

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                              + + +M L   +P ++TY+ L++  
Sbjct: 194 ----------------------------------VDTFREMPLKNCNPDVFTYSTLMNGL 219

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C E +V E   L DEM+      N VT+N LI  L K   +  A +L+D M + G  PN 
Sbjct: 220 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 279

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LI G C  G+ DKA  L  ++ S+   P+ VTY  +I    K   ++    ++  
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           MEERG   +E  Y+ LI    +    E A  ++  M + G  P+V  YG  I GLC    
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             EA  +   M      PN   Y+ ++ G+ K+G+S +A+ +  EM  + +  N+   S 
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  LC+ G+  EA  +   ML  GLKP V  Y+ + + 
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKG 498



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 209/460 (45%), Gaps = 24/460 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  II A  K    D+A+  F +M      P   T+++L+  + K    D+      E +
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  L +  +F +LI    + GDL++A ++++ +   G  PN V Y +LI G C  G ++
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  K+     V  Q TY  +I GL K    +DG      M+  G   + Y Y+ LI
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                EGK     +L+ EM  +    NVV Y   I GLC++ +  EAE +L +M   G  
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY+ L+ GF   G++ KA  ++ ++ S     +VV  +VL+    ++G  + A  +
Sbjct: 417 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 476

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGL 465
              M   G+ P  V Y+ +I        ++K  +++  MQ  +    PDV TY +L + L
Sbjct: 477 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 536

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNM---------------------MIFGYCKEG 504
           C + N+  A  L NSM +   +P+ +  N+                     ++    K  
Sbjct: 537 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRE 596

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
               ALR++ EM  + L P  +++S  I   C+  +  E 
Sbjct: 597 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 39/222 (17%)

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV--- 408
           T+ +LI+ +  + E     ++ +++K  G+   V+T  + I  F   G + +  + V   
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREGR---VLTETIFILIFKACGKAHLPGEAVNFF 123

Query: 409 -REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R   +     +  ++  +++  ++  D   AF+ Y           ++ +G    G   
Sbjct: 124 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY-----------LHVFGANSKGF-- 170

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                              +PN + YN++I   CK G   RA+    EM  K   P++ +
Sbjct: 171 -------------------QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFT 211

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           YS+ +  LC++ +  EA  LL++M   G  P+   +N+L  A
Sbjct: 212 YSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDA 253


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 225/446 (50%), Gaps = 28/446 (6%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGI 180
           D A+  F+++L     P +  FN +L  ++KS  +    L+ S+      ++ ++ +  I
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHT-VLYLSQKMEFRGIKPNLVNCNI 102

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI   C+ G +  AF VL ++ +MG+ PN +   +LI G C NG I     +  K+    
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL---- 158

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                                KD  + + KM L  ++P +YT+  L+  +C EG+V E  
Sbjct: 159 ---------------------KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAK 197

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            +   M  + +   VVTYN+L+ G     +V +A+ + + M   G+SP++ +Y+ LI+GF
Sbjct: 198 NVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGF 257

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C     D+A  L  ++      P+VVTY+ LI    K+G    A  LV EM +RG  P+ 
Sbjct: 258 CKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNI 317

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY+ ++D+  ++  ++ A  + + M+  G  P++YTY +LI GLC  G +++A K+F  
Sbjct: 318 VTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFED 377

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           +       N   Y +MI G+C +G    AL LL +M + G +PN  +Y   I  L +  +
Sbjct: 378 LLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDE 437

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              AE LL +M++      V+L N L
Sbjct: 438 NEMAEKLLCEMIETNFDGRVALTNDL 463



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  DVY+F IL+ G C+ G + +A  VL  +   G  P VV Y SL+DG      + +AK
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK 232

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F  + +LG+     +Y++LI G  K  +  +  E  ++M    + P++ TY+ LI   
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  GK+S   KL DEM  R    N+VTY++++  LCK  +V  A  LL QMK  GI PN+
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY  LI G C +G+ + A ++F  L   G + +V TY V+I+ F   G    A  L+ +
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           ME+ G  P+  TY I+I S  + D+ E A ++   M ++ F   V     LI  + + G
Sbjct: 413 MEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 166/347 (47%), Gaps = 25/347 (7%)

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           N D++ A  LF ++ +         +  ++  L K+          +KM+  G+ P+L  
Sbjct: 40  NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
            N LI+ +C  G +   F +  ++       N +T NTLI GLC   ++           
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIH---------- 149

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
                          D  C  G+   A  LFN++     +P V T+ +L+  F K G  K
Sbjct: 150 ---------------DKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVK 194

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A +++  M  +GI P  VTY  L+D +     + KA  +++ M + G SPD+ +Y +LI
Sbjct: 195 EAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +G C    M EA +L   M   ++ PN V Y+ +I G CK G    AL+L+ EM+++G  
Sbjct: 255 NGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQP 314

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           PNI +YSS +  LC++ +   A  LL QM   G++P++  Y IL + 
Sbjct: 315 PNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 10/288 (3%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N   V +   LF+ +  +      + +N ++  L K         L  +M+  GI PN++
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS----------KAGNS 401
             N LI+ FC  G    AF +  ++   G  P+ +T N LI+               G  
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           K A DL  +M    I P   T+TIL+D F +   +++A  + ++M   G  P V TY  L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + G  +   + +A  +FN+M +  + P+   Y+++I G+CK      A+ LL EM+ K +
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +PN+ +YSS I  LC+ GK   A  L+++M   G  P++  Y+ +  A
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 10/228 (4%)

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I Y      F +  + D A  LFN+L     +P  + +N ++ +  K+ +      L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++ME RGI P+ V   ILI+SF +   +  AF + + + K G+ P+  T   LI GLC+ 
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 469 ----------GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
                     G +K+A  LFN M    + P+   + +++ G+CKEG    A  +L  M  
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G+ P + +Y+S +       +  +A+ + N M +LG+ P +  Y+IL
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSIL 253


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 207/400 (51%), Gaps = 3/400 (0%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-CCKNGDIER 228
           KV  D+ +FGILI  CC+AG LN  F  L Q+ + G   + V +T L+   C K    + 
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCL 286
             ++ R++ ELG      +Y+ L+ GL      ++  E    M  +G    P + +Y+ +
Sbjct: 68  MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +  EG V + + LF +M    +  NVVT N++I GLCK   + +AE +L QM    I
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN  TYN LI G+  +G+  +A R+  ++  +GQ P+VVTYN+LI    K+G    A +
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M + G  P   TY  L+  +    ++ +   +  LM ++G   + +T+ + I+  C
Sbjct: 248 IFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYC 307

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + EAS  F  M +    P+ V Y  +I G CK G    A+    +M + GL PNI 
Sbjct: 308 KCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNII 367

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++++ I      GKW +AE L  +M+  G+ P V+++  +
Sbjct: 368 TFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAM 407



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 195/395 (49%), Gaps = 2/395 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNGDIERAKM 231
           DV+S+  L+KG C      +A E+++ + E G    P+VV Y+++I G  K GD+ +A  
Sbjct: 83  DVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYT 142

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           LF K+ + G+     T   +I GL K           ++M    + P+  TYN LIH Y 
Sbjct: 143 LFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYL 202

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           + G+ +E  ++  EM       NVVTYN LI  LCK     EA  + + M  +G  P+  
Sbjct: 203 SSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDAT 262

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  L+ G+   G   +   + + +  NG   +  T+++ I A+ K G    AS    +M
Sbjct: 263 TYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKM 322

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           ++ G  P  VTYT +ID   +   ++ A   +  M   G SP++ T+  LIHG  M G  
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A +LF  M +  + P+  ++  MI    KEG    A +L   M   G  PN+ SY++ 
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I      G+  E   LL+ ML +GLKP+   +N L
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 477



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 218/486 (44%), Gaps = 54/486 (11%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWL-FFSENRCKVELD 174
           K R SD       +M + G  P   ++++LL  +   K C      +   +E+      D
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V S+  +I G  + GD+ KA+ +  ++ + G  PNVV   S+IDG CK   +++A+ + +
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ +  ++    TY  LI G   +G   +     ++M  +G  P++ TYN LI   C  G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGL----------------------------- 325
             +E  ++F+ M       +  TY +L+ G                              
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 326 ------CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
                 CK  R+ EA     +M+  G  P+++TY  +IDG C  G  D A   F Q+  +
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+++T+  LI  FS  G  + A +L  EM +RGI P    +T +ID   +   + +A
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +++ LM ++G  P+V +Y  +IHG  + G + E  KL + M    L+P  V +N ++ G
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
                           M   GL P++ +  + I   C+DG+  +   L  +ML    K  
Sbjct: 481 ----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTD 524

Query: 560 VSLYNI 565
               NI
Sbjct: 525 TITENI 530


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 204/398 (51%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C   +   S  +++ G C++G ++ A  +L++L   G   N   Y SL+D   +  + + 
Sbjct: 142 CPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDA 201

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L +++   G+  T  TYT+L+ GL + G        Y++M+   V+  +Y Y+ +I+
Sbjct: 202 VAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVIN 261

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G V    ++FDE     V  N  TY  LI G CK  +++ AE LL  M++ G+  
Sbjct: 262 AYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGH 321

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I +N +IDG+C  G  +KA  +   ++  G    + TYN L     +    + A  L+
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M E+G+ P+ V+YT LI    +  DM +A  ++  M+  G  P V TY V+I G    
Sbjct: 382 HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++EA +    M +  L P+   Y  ++ G+C  G    ALRL  EM  +G  PN+ +Y
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAY 501

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ +  L ++G+  EA  L + ML  GL P  +LY++L
Sbjct: 502 TALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           P+S  P++ S     ++D   KS   D A     ++   GV   +  +NSLL    +  +
Sbjct: 143 PASVTPLSAS----VVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRN 198

Query: 157 FDK--GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            D   G L   ENR  VE  V ++ IL+ G   AGD++K   V ++++    + +V  Y+
Sbjct: 199 DDAVAGLLKEMENR-GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYS 257

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           ++I+  C+ G++ RA  +F +    G+   + TY  LI G  K G  +        MQL 
Sbjct: 258 AVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLR 317

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV  +   +N +I  YC  G V +  ++   M    +  ++ TYNTL CGLC+  R+++A
Sbjct: 318 GVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDA 377

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           ++LL  M   G++PN ++Y  LI      G+  +A RLF  ++  G  PSVVTYNV+I  
Sbjct: 378 KKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 437

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + K G+ + A    +EME++G+ P   TY  L+     +  ++ A  ++  M+  G  P+
Sbjct: 438 YIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPN 497

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           V  Y  L+ GL  +G  +EA +L++ M    L P+D +Y++++
Sbjct: 498 VVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 174/358 (48%), Gaps = 1/358 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y S++D++ + R  D       +M + GV P   T+  L+  + ++    K    + E  
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  DVY +  +I   C  G++ +A EV ++    G  PN   Y +LI+G CK G IE
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ML   +   G+   Q  +  +I G  ++G+ +   E    M+  G+   +YTYN L 
Sbjct: 306 AAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C   ++ +  KL   M  + VA N V+Y TLI    KE  + EA RL   M+  G  
Sbjct: 366 CGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSR 425

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+TYN +IDG+   G   +A R   +++  G  P + TY  L+      G   +A  L
Sbjct: 426 PSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRL 485

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             EM+ RG  P+ V YT L+    +    E+AF++Y  M  +G +PD   Y VL+  L
Sbjct: 486 FEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%)

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +L + I       T  + +V++ G  K+G   D     +++  +GV  +   YN L+ 
Sbjct: 132 ADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLD 191

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y  +        L  EM +R V   V TY  L+ GL +   + + E + D+MK   ++ 
Sbjct: 192 SYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAG 251

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V  Y+ +I+ +C  G   +A  +F++   +G  P+  TY  LI  F K G  + A  L+
Sbjct: 252 DVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLL 311

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            +M+ RG+  +++ +  +ID + R   +EKA E+ ++M+K G   D+YTY  L  GLC  
Sbjct: 312 ADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRV 371

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             M++A KL + M E  + PN V Y  +I  + KEG+   A RL  +M  KG  P++ +Y
Sbjct: 372 NRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTY 431

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +  I    ++G   EAE    +M K GL P +  Y
Sbjct: 432 NVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           ++ ++ID + +  + ++AL     M   G+     T+N+L   + +     D   L    
Sbjct: 325 VFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIM 384

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V  +  S+  LI    + GD+ +A  +   +E  G  P+VV Y  +IDG  KNG I
Sbjct: 385 AEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSI 444

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+   +++ + GLV   +TY  L+ G   NG        +E+M+  G  P++  Y  L
Sbjct: 445 REAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTAL 504

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           +     EG+  E F+L+D+M    +  +   Y+ L+  L  + R
Sbjct: 505 VSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 52/110 (47%)

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           V++ G C  G++ +A  L + +    +  N   YN ++  Y ++ N      LL EM  +
Sbjct: 153 VVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENR 212

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+ P + +Y+  +  L + G   + E + ++M +  +   V  Y+ +  A
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 241/467 (51%), Gaps = 14/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           Y  IID   K     +A   + ++L +  V P   ++N ++  + K   F +G   W   
Sbjct: 221 YNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERM 280

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            +N  K   D++++  LI G  EAGDL  A +V  ++   G  P+VV   ++++G CK G
Sbjct: 281 KKNERKC--DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAG 338

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           ++E    L+ ++G+  L   + +Y + + GLF+NG   D    ++ +    +     TY 
Sbjct: 339 NVEECFELWEEMGKCSLRNVR-SYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYG 393

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNV--VTYNTLICGLCKEMRVQEAERLLDQMK 342
            ++H  C  G V+   ++ +E  HRE   +V    Y++LI  LCKE R+ EA+ +++ M 
Sbjct: 394 VVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMN 453

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G   N    N LIDGF    + D A ++F ++   G S +VV+YN+LI    +A   +
Sbjct: 454 KRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFR 513

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A D V EM E+G  P  +TY+ LI     S+ M+ A  ++     +G  PD+  Y ++I
Sbjct: 514 EAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVI 573

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           H LC  G +++A +L++++ + K   N V +N ++ G+ K GN   A ++   + E  L 
Sbjct: 574 HRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQ 632

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+I SY+ T+  LC  G+  +A   L+  L  G  P+   +NIL RA
Sbjct: 633 PDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRA 679



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 244/517 (47%), Gaps = 36/517 (6%)

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNT 143
           P  LL H  ++  +   P  +  +  +++ A+ K+R+ ++AL  F  M    G  P   +
Sbjct: 57  PGLLLAHAPRIIAAIHCPCPED-VPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRS 115

Query: 144 FNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           FN+LL   ++S  + +   FF      +V  +V ++ +L+K  C+ G+  K   +L  + 
Sbjct: 116 FNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMW 175

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G SP+ + Y +LI G  K+GD+  A  +F ++ E G+      Y ++I G FK G   
Sbjct: 176 GAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFV 235

Query: 263 DGFEFYEK-MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
              E +E+ ++   V PS+ +YN +I   C  G+ SEG ++++ M+  E  C++ TY+ L
Sbjct: 236 KAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSAL 295

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ------ 375
           I GL +   +  A ++ ++M   G+ P+V+T N +++G C AG  ++ F L+ +      
Sbjct: 296 IHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL 355

Query: 376 ------------LKSNGQSPSVV------------TYNVLIRAFSKAGNSKMASDLVREM 411
                       L  NG+    +            TY V++      G    A  ++ E 
Sbjct: 356 RNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEA 415

Query: 412 EER--GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E R  G+   E  Y+ LI++  +   +++A  +  LM K G   + +   VLI G     
Sbjct: 416 EHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHS 475

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A K+F  M         V YN++I G  +      A   + EM EKG  P+I +YS
Sbjct: 476 KLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYS 535

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + IG L +      A  L +Q L  G KP + +YNI+
Sbjct: 536 TLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIV 572



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 171/351 (48%), Gaps = 4/351 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           GFSP+  ++  ++     +  +  A    R I  +     +     L+    K  +  + 
Sbjct: 38  GFSPSSAVFHHILRRVAADPGLLLAHAP-RIIAAIHCPCPEDVPLTLLKAYAKTRMPNEA 96

Query: 265 FEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
              ++ M  + G SP++ ++N L++ +    + +     F       V+ NV TYN L+ 
Sbjct: 97  LHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMK 156

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            +CK+   ++   LL  M  AG+SP+ ITY  LI G   +G+   A  +F++++  G  P
Sbjct: 157 VMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEP 216

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLV-REMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
            VV YN++I  F K G+   A ++  R + E  + PS V+Y ++I    +     +  E+
Sbjct: 217 DVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEI 276

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M+K+    D++TY  LIHGL   G++  A K++  M    + P+ V  N M+ G CK
Sbjct: 277 WERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCK 336

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            GN      L  EM +  L  N+ SY+  +  L ++GK  +A +L + +L+
Sbjct: 337 AGNVEECFELWEEMGKCSL-RNVRSYNIFLKGLFENGKVDDAMMLWDGLLE 386



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 5/287 (1%)

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           L+  Y      +E   +F  M H    C+  + ++NTL+    +  +   AE      + 
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHV-FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           A +SPNV TYN L+   C  GE +K   L   +   G SP  +TY  LI   +K+G+   
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLI 462
           A ++  EM ERG+ P  V Y ++ID F +  D  KA EM+  L+++    P V +Y V+I
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            GLC  G   E  +++  M + + + +   Y+ +I G  + G+   A ++  EM  +G+ 
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P++ + ++ +  LC+ G   E   L  +M K  L+ +V  YNI  + 
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKG 367



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 155/370 (41%), Gaps = 67/370 (18%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKV---------------- 171
           + +M+  GVRP   T N++L  + K+ + ++ +  + E  +C +                
Sbjct: 312 YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFEN 371

Query: 172 --------------ELDVYSFGILIKGCCEAGDLNKAFEVLNQLE--EMGFSPNVVIYTS 215
                         E D  ++G+++ G C  G +N+A +VL + E  E G   +   Y+S
Sbjct: 372 GKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSS 431

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI+  CK G ++ A  +   + + G     H   VLI G  K+       + + +M   G
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
            S ++ +YN LI+      +  E +   +EM  +    +++TY+TLI GL +   +  A 
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAAL 551

Query: 336 RLLDQMKMAGISP----------------------------------NVITYNKLIDGFC 361
           RL  Q    G  P                                  N++T+N +++GF 
Sbjct: 552 RLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFY 611

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G  + A +++  +  +   P +++YN+ ++     G    A   + +   RG  P+ +
Sbjct: 612 KVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAI 671

Query: 422 TYTILIDSFV 431
           T+ IL+ + +
Sbjct: 672 TWNILVRAVI 681


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 219/443 (49%), Gaps = 7/443 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCC 186
           QM   G+ P   T N   I +   C   +    FS     ++L    D  +F  LI+G C
Sbjct: 175 QMDSFGIPPDVYTLN---ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 231

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G + +A  + ++    GF P+VV Y +L++G CK G+   A  L R + +        
Sbjct: 232 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 291

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  +I  L K+    + F  + +M   G+SP ++TYN LIH  CN  +      L +EM
Sbjct: 292 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 351

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            + ++  NVV ++T++  LCKE  +  A  ++D M   G+ P+V+TY  L+DG C   E 
Sbjct: 352 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A ++F+ +   G  P+V +YN+LI  + +      A  L+ +M  +G+    VTY  L
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I        ++ A  ++  M  SG  PD+ TY +L+  LC   ++ EA  L  ++  + L
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           + + +VYN+ I G C+ G    A  L   ++ KGL P++ +Y+  I  LC+ G   EA  
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L  +M + G      +YN + R 
Sbjct: 592 LFRKMDENGCSRDGCIYNTIIRG 614



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 217/445 (48%), Gaps = 36/445 (8%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + TFN+L+  +       +    F +   +  + DV ++G L+ G C+ G
Sbjct: 210 KLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVG 269

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           + + A  +L  + +    PNV+ Y ++ID  CK+  +  A  LF ++   G+     TY 
Sbjct: 270 NTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 329

Query: 250 VLI------C-----------------------------GLFKNGLQKDGFEFYEKMQLN 274
            LI      C                              L K G+     +  + M   
Sbjct: 330 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 389

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV P + TY  L+  +C   ++ E  K+FD M H+    NV +YN LI G C+  R+ +A
Sbjct: 390 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 449

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LL+QM + G+  + +TYN LI G C  G    A  LF+++ ++GQ P +VTY +L+  
Sbjct: 450 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 509

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K  +   A  L++ +E   +    + Y I ID   R+ ++E A +++S +   G  PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY ++IHGLC +G + EA+KLF  M E     +  +YN +I G+ +   ++ A +LL 
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDG 539
           EM  +G   ++++ +  + +L  DG
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 206/446 (46%), Gaps = 3/446 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++ML     P +  F  LL  + K   +       ++ +   +  DVY+  IL
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 191

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELG 240
           I   C    L  AF VL +L ++G  P+   + +LI G C  G I  A  LF K IGE G
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE-G 250

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY  L+ GL K G           M      P++  YN +I   C + +V+E F
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            LF EM  + ++ ++ TYN+LI  LC     +    LL++M  + I PNV+ ++ ++D  
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G    A  + + +   G  P VVTY  L+           A  +   M  +G  P+ 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            +Y ILI+ + +   M+KA  +   M   G   D  TY  LIHGLC  G ++ A  LF+ 
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M  +   P+ V Y +++   CK  +   A+ LL  +    L  +I  Y+  I  +C+ G+
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A  L + +   GL+P V  YNI+
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIM 576



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 104/222 (46%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ + + KL+              L  Q+ S G  P V T N+LI +F        A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + ++ + G  P   T+  LI        + +A  ++      GF PDV TYG L++GLC 
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN   A +L  SM +    PN + YN +I   CK+     A  L  EM  KG+ P+I +
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+S I  LC   +W     LLN+M+   + P+V +++ +  A
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 107/207 (51%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +  L+ + +K  +      L  +M+  GI P   T  IL
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 191

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF     +  AF + + + K G  PD  T+  LI GLC++G + EA  LF+       
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 251

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P+ V Y  ++ G CK GN+  A+RLL  M +K   PN+ +Y++ I  LC+D +  EA  
Sbjct: 252 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ P +  YN L  A  N+
Sbjct: 312 LFSEMITKGISPDIFTYNSLIHALCNL 338



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 1/236 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  +I+ + + +  D+A+    QM   G+   + T+N+L+  +           
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486

Query: 163 FFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F E     ++ D+ ++ IL+   C+   L +A  +L  +E      ++++Y   IDG C
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G++E A+ LF  +   GL     TY ++I GL K GL  +  + + KM  NG S    
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            YN +I  +    +     +L  EM     + +V T   ++  L  +   Q  ERL
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN----------------------- 145
           Y ++ID   K+++ D+A   F QM+D GV+P ++T+N                       
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 146 ------------SLLIFVIKSCSFDKGWLFF-SENRCKVELDVYSFGILIKGCCEAGDLN 192
                       SLL ++  +    +   FF S  R  ++ +V  +GILI G    G L+
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +  ++LN + E G SP+  I+  +     K   I+ A  +F K+ + GL      +  LI
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P+++ +N L++  C   K  +  + + EM ++ + 
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +VV +NT++C LC + +V +A+RL+D M+  G  P+VI+Y  LI G C  G  D+A + 
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P   TYN L+  + +AG    A  + REM   GITP  VTY+ ++     
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +    +A E+Y  M  SG   +++ Y ++++GL     + EA KLF S+     +     
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N+MI    K G +  A+ L   ++  GLVP++ +Y      L ++G   E + L + M 
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 553 KLGLKPSVSLYNILYR 568
           K G  P+  + N L R
Sbjct: 721 KSGTTPNSRMLNALVR 736



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 241/525 (45%), Gaps = 68/525 (12%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N +  ++L + + DA    RL +       +M + G  P   ++N+LL          KG
Sbjct: 128 NNIVINQLLKGLCDA---KRLREAMDILIKRMPELGCTPDVVSYNTLL----------KG 174

Query: 161 WLFFSENRCKVELD----------------VYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
             F +E R +  L+                V S+  +I G    G ++KA+ +  ++ + 
Sbjct: 175 --FCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDR 232

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PNVV YT++IDG CK   ++RA+ +F+++ + G+     TY  LI G    G  K+ 
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               E+M  +G+ P  YTY  L++  CN G+  E    FD M  + +  NV  Y  LI G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352

Query: 325 -----------------------------------LCKEMRVQEAERLLDQMKMAGISPN 349
                                                K+  + EA  + ++MK  G+SP+
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+ +  LID  C  G  D A   FNQ+ + G +P++  +N L+         + A +   
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +GI P  V +  ++ +      + KA  +  LM++ G  PDV +Y  LI G C+ G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA+K  + M    L+P++  YN ++ GYC+ G    A  +  EM   G+ P + +YS
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR--AKNN 572
           + +  L    ++ EA+ L   M+  G + ++ +YNI+    +KNN
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 191/401 (47%), Gaps = 4/401 (0%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV  D+ ++ ILI   C  G L   F     + + G+  N ++   L+ G C    +  A
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM---QLNGVSPSLYTYNC 285
             +L +++ ELG      +Y  L+ G       ++  E    M   Q     P++ +Y  
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG+V + + LF EM  R +  NVVTY T+I GLCK   V  AE +  QM   G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  TYN LI G+   G+  +  R+  ++ ++G  P   TY  L+      G  + A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
                M  +GI P+   Y ILI  +     + +  ++ +LM ++G SPD + + ++    
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
             K  + EA  +FN M +  L P+ V +  +I   CK G    A+    +M  +G+ PNI
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++S +  LC   KW +A+    +ML  G++P V  +N +
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 207/462 (44%), Gaps = 1/462 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+        D+A   F +M+D G++P   T+ +++  + K+   D+    F +  
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V+ D  ++  LI G    G   +   +L ++   G  P+   Y SL++  C NG   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+  F  +   G+      Y +LI G    G   +  +    M  NG+SP  + +N + 
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y  +  + E   +F++M+ + ++ +VV +  LI  LCK  RV +A    +QM   G++
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+  +N L+ G C   + +KA   + ++ + G  P VV +N ++      G    A  L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  ME  G  P  ++YT LI        +++A +   +M   G  PD +TY  L+HG C 
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A  +F  M    + P  V Y+ ++ G         A  L   M   G   NI  
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y+  +  L ++    EA  L   +     +  ++ +NI+  A
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 4/298 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA- 334
           V+P L TY+ LI  +C  G++  GF  F  +       N +  N L+ GLC   R++EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQS--PSVVTYNVL 391
           + L+ +M   G +P+V++YN L+ GFC+    ++A  L + +  S G+S  P+VV+Y  +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  F   G    A +L  EM +RGI P+ VTYT +ID   ++  +++A  ++  M   G 
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD  TY  LIHG    G  KE  ++   M    L+P+   Y  ++   C  G    A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               M  KG+ PN+A Y   I      G   E   LLN M++ GL P   ++NI++ A
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 202/429 (47%), Gaps = 7/429 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M+++G+ P  + FN +     K    D+    F++ + + +  DV +FG LI   C+ G 
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A    NQ+   G +PN+ ++ SL+ G C     E+AK  + ++   G+      +  
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++C L   G         + M+  G  P + +Y  LI  +C  G++ E  K  D M    
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +  TYNTL+ G C+  R+ +A  +  +M   GI+P V+TY+ ++ G        +A 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L+  + ++G+  ++  YN+++   SK      A  L + +  +       T+ I+I + 
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +S   E A  +++ +   G  PDV+TY ++   L  +G ++E   LF++M ++   PN 
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD------GKWPEA 544
            + N ++      G+  RA   L +++EK      ++ +  I +L +D         PE 
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788

Query: 545 EVLLNQMLK 553
             +LN+  K
Sbjct: 789 YRVLNEAKK 797



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 44/366 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           + ++IDA  K    D A+  F+QM++ GV P    FNSL   V   C+ DK W      +
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL---VYGLCTVDK-WEKAKEFY 471

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  DV  F  ++   C  G + KA  +++ +E +G  P+V+ YT+LI G C  
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLV 531

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A      +  +GL   + TY  L+ G  + G   D +  + +M  NG++P + TY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 284 NCLIHE-------------YCN---EGK-------------------VSEGFKLFDEMRH 308
           + ++H              Y N    GK                   V E FKLF  +  
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           ++    + T+N +I  L K  R ++A  L   +   G+ P+V TY  + +   + G  ++
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LF+ ++ +G +P+    N L+R     G+   A   + +++E+  +    T  +LI 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771

Query: 429 SFVRSD 434
              R +
Sbjct: 772 LLSRDE 777



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/236 (19%), Positives = 105/236 (44%), Gaps = 1/236 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y +++  + ++   D A   F +ML +G+ P   T++++L  +  +  F +   L+ +  
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + +++ + I++ G  +   +++AF++   L    F   +  +  +I    K+G  E
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  I   GLV    TY ++   L + G  ++  + +  M+ +G +P+    N L+
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
               + G ++       ++  +  +    T   LI  L ++     A  L ++ ++
Sbjct: 736 RRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 1/167 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSE 166
           +Y  I++   K+   D+A   F  +     +    TFN ++  + KS  + D   LF + 
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   +  DV+++ ++ +   E G L +  ++ + +E+ G +PN  +  +L+      GDI
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            RA     K+ E        T  +LI  L ++          EK ++
Sbjct: 745 TRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 243/527 (46%), Gaps = 71/527 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L+ + I+A  K    ++A+  F +M ++GV P   TFN+++  +     +D+ ++F  + 
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID-------- 218
             + +E  + ++ IL+KG   A  +  A+ VL ++ + GF PNV++Y +LID        
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394

Query: 219 ---------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                      G CKNG  + A+ L +++  +G    Q ++T +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454

Query: 252 IC-----------------------------------GLFKNGLQKDGFEFYEKMQLNGV 276
           IC                                   GL K+G      E + +    G 
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                T N L+H  C  GK+ E F++  E+  R    + V+YNTLI G C + ++ EA  
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            LD+M   G+ P+  TY+ LI G  +  + ++A + ++  K NG  P V TY+V+I    
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KA  ++   +   EM  + + P+ V Y  LI ++ RS  +  A E+   M+  G SP+  
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI G+ +   ++EA  LF  M    LEPN   Y  +I GY K G   +   LL EM
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + K + PN  +Y+  IG   +DG   EA  LLN+M + G+ P    Y
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 220/471 (46%), Gaps = 43/471 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFF 164
           Y  ++    +++    A F   +M   G  P    +N+L+   I++ S +K      L  
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF------------------ 206
           S+    + L   ++  LIKG C+ G  + A  +L ++  +GF                  
Sbjct: 406 SKG---LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 462

Query: 207 -----------------SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
                            SP   + T+LI G CK+G   +A  L+ +    G V    T  
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ GL + G   + F   +++   G      +YN LI   C + K+ E F   DEM  R
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +  TY+ LICGL    +V+EA +  D  K  G+ P+V TY+ +IDG C A  T++ 
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
              F+++ S    P+ V YN LIRA+ ++G   MA +L  +M+ +GI+P+  TYT LI  
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                 +E+A  ++  M+  G  P+V+ Y  LI G    G M +   L   M    + PN
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDG 539
            + Y +MI GY ++GN   A RLL EM EKG+VP+  +Y   I G L Q G
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 813



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 274/624 (43%), Gaps = 82/624 (13%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTP-QSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
           +K+ P  A   F  AS         +S  +++ LLL    ++  +AA+ +++++I+G + 
Sbjct: 115 SKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLD---ANLLSAARVVLIRLINGNVP 171

Query: 80  SSSFTPRSLLCHLTQLFPSSS---NPVTKSRLYESIIDAHLKSRLSDQ---ALFYFHQML 133
                 R     +     S S   +   + ++ + +I+ +      D    AL  F  + 
Sbjct: 172 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 231

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
           + G+ P   T N LL  ++++  F K    F +  CK V  DVY F   I   C+ G + 
Sbjct: 232 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 290

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A ++ +++EE G +PNVV + ++IDG    G  + A M   K+ E G+  T  TY++L+
Sbjct: 291 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL +     D +   ++M   G  P++  YN LI  +   G +++  ++ D M  + ++
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--------------------------- 345
               TYNTLI G CK  +   AERLL +M   G                           
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470

Query: 346 --------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
                   +SP       LI G C  G+  KA  L+ Q  + G      T N L+    +
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530

Query: 398 AGNSKMASDLVRE-----------------------------------MEERGITPSEVT 422
           AG    A  + +E                                   M +RG+ P   T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ILI      + +E+A + +   +++G  PDVYTY V+I G C     +E  + F+ M 
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++PN VVYN +I  YC+ G    AL L  +M  KG+ PN A+Y+S I  +    +  
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA++L  +M   GL+P+V  Y  L
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTAL 734



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 180/355 (50%), Gaps = 1/355 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D AL +  +ML   + P      +L+  + K     K   L+F        +D  +   L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G CEAG L++AF +  ++   G   + V Y +LI GCC    ++ A M   ++ + GL
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +TY++LICGLF     ++  +F++  + NG+ P +YTY+ +I   C   +  EG +
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            FDEM  + V  N V YN LI   C+  R+  A  L + MK  GISPN  TY  LI G  
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                ++A  LF +++  G  P+V  Y  LI  + K G       L+REM  + + P+++
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TYT++I  + R  ++ +A  + + M++ G  PD  TY   I+G   +G + EA K
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 191/422 (45%), Gaps = 9/422 (2%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y ++I  + K+  +D A     +ML  G      +F S++  +     FD    F  
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472

Query: 166 ENRCKVELDVYSFG-----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           E    + L   S G      LI G C+ G  +KA E+  Q    GF  +     +L+ G 
Sbjct: 473 E----MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ G ++ A  + ++I   G V  + +Y  LI G        + F F ++M   G+ P  
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY+ LI    N  KV E  + +D+ +   +  +V TY+ +I G CK  R +E +   D+
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M    + PN + YN LI  +C +G    A  L   +K  G SP+  TY  LI+  S    
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L  EM   G+ P+   YT LID + +   M K   +   M      P+  TY V
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G    GN+ EAS+L N M E  + P+ + Y   I+GY K+G    A +   E N   
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 828

Query: 521 LV 522
           ++
Sbjct: 829 II 830



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 37/224 (16%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N    + +Y  +I A+ +S     AL     M   G+ P S T+ S            
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS------------ 698

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                                 LIKG      + +A  +  ++   G  PNV  YT+LID
Sbjct: 699 ----------------------LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G  K G + + + L R++    +   + TYTV+I G  ++G   +      +M+  G+ P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              TY   I+ Y  +G V E FK  DE  +   A  +  +N LI
Sbjct: 797 DSITYKEFIYGYLKQGGVLEAFKGSDEENY---AAIIEGWNKLI 837


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 262/565 (46%), Gaps = 19/565 (3%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQS---ISIILRLLLSKMSSHSHAAAQT 68
           LT++L  + A+L P   FS    +S      TP +   +SI  ++  S+    S+     
Sbjct: 36  LTISL-HKPARLSPFFYFSSLPLSSNS----TPDAQNELSISPQIFKSRPQFGSYKLGDA 90

Query: 69  LILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFY 128
              ++I    TS  F       H           V    ++  I  A  K+ L  +A+ +
Sbjct: 91  TFYRLIENYATSREFH----FIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNF 146

Query: 129 FHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKGWLF----FSENRCKVELDVYSFGILIK 183
           FH+M  D   +    +FNS+L  +I+   F   + F    F  N    + ++ ++ ++IK
Sbjct: 147 FHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIK 206

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C+ G +++A +   ++     +P+V  Y++L++G CK   ++ A  L  ++   G + 
Sbjct: 207 ALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLP 266

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+ VLI  L KNG      +  + M L G  P+  TYN LIH  C +GK+ +   L 
Sbjct: 267 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 326

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           ++M   +   N VTY T+I GL K+ R ++   +L  M+  G   N   Y+ LI G    
Sbjct: 327 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 386

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+++ A RL+ ++   G  P+VV Y   I    +      A D+++EM  +G  P+  TY
Sbjct: 387 GKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTY 446

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + L+  F +  D +KA  ++  M       +V    VL++GLC  G ++EA  ++  M  
Sbjct: 447 SSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLG 506

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM--NEKGLVPNIASYSSTIGVLCQDGKW 541
             L+P+ V Y+ MI G C  G+  + L+L  EM   E    P++ +Y+     LC+    
Sbjct: 507 EGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNL 566

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  LLN ML  G  P     NI 
Sbjct: 567 TRAIDLLNSMLDEGCDPDSLTCNIF 591



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 202/459 (44%), Gaps = 48/459 (10%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL------FFSE--NRCKVEL 173
           + +   + HQ+LD   R       ++ I + K+C   K  L      FF    N    + 
Sbjct: 101 TSREFHFIHQVLDRMKREGRVLTETIFILIFKACG--KAHLPGEAVNFFHRMANDLHCKQ 158

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            V SF  ++    + GD + AF+    +      GF PN++ Y  +I   CK G I+RA 
Sbjct: 159 TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRA- 217

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                              + + +M L   +P ++TY+ L++  
Sbjct: 218 ----------------------------------VDTFREMPLKNCNPDVFTYSTLMNGL 243

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C E +V E   L DEM+      N VT+N LI  L K   +  A +L+D M + G  PN 
Sbjct: 244 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 303

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LI G C  G+ DKA  L  ++ S+   P+ VTY  +I    K   ++    ++  
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           MEERG   +E  Y+ LI    +    E A  ++  M + G  P+V  YG  I GLC    
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             EA  +   M      PN   Y+ ++ G+ K+G+S +A+ +  EM  + +  N+   S 
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  LC+ G+  EA  +   ML  GLKP V  Y+ + + 
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKG 522



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 209/460 (45%), Gaps = 24/460 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  II A  K    D+A+  F +M      P   T+++L+  + K    D+      E +
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  L +  +F +LI    + GDL++A ++++ +   G  PN V Y +LI G C  G ++
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  K+     V  Q TY  +I GL K    +DG      M+  G   + Y Y+ LI
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                EGK     +L+ EM  +    NVV Y   I GLC++ +  EAE +L +M   G  
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY+ L+ GF   G++ KA  ++ ++ S     +VV  +VL+    ++G  + A  +
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 500

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGL 465
              M   G+ P  V Y+ +I        ++K  +++  MQ  +    PDV TY +L + L
Sbjct: 501 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 560

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNM---------------------MIFGYCKEG 504
           C + N+  A  L NSM +   +P+ +  N+                     ++    K  
Sbjct: 561 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRE 620

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
               ALR++ EM  + L P  +++S  I   C+  +  E 
Sbjct: 621 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 39/222 (17%)

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV--- 408
           T+ +LI+ +  + E     ++ +++K  G+   V+T  + I  F   G + +  + V   
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGR---VLTETIFILIFKACGKAHLPGEAVNFF 147

Query: 409 -REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R   +     +  ++  +++  ++  D   AF+ Y           ++ +G    G   
Sbjct: 148 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY-----------LHVFGANSKGF-- 194

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                              +PN + YN++I   CK G   RA+    EM  K   P++ +
Sbjct: 195 -------------------QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFT 235

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           YS+ +  LC++ +  EA  LL++M   G  P+   +N+L  A
Sbjct: 236 YSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDA 277


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 222/458 (48%), Gaps = 34/458 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K   SD+A   +H+MLD G+ P   T+NS+                     
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI--------------------- 237

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                        I   C+A  ++KA EVLN + + G  P+ + Y S++ G C +G  + 
Sbjct: 238 -------------IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A    +K+   G+     TY++L+  L KNG   +  + ++ M   G+ P + TY  L+ 
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y  +G + E   L D M    +  +   ++ LIC    + +V +A  +  +M+  G++P
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNP 404

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N +TY  +I   C +G  + A   F Q+   G SP  + YN LI         + A +L+
Sbjct: 405 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM +RGI  + + +  +IDS  +   + ++ +++ LM + G  P+V TY  LI+G C+ 
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M EA KL + M    L+PN V Y+ +I GYCK      AL L  EM   G+ P+I +Y
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  L Q  +   A+ L  ++ + G +  +S YNI+
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 218/436 (50%), Gaps = 39/436 (8%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V  D+ ++GILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ ELG +    +Y +L+ GL      ++  E    M  +   G  P + +Y  
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG   + +  + EM  R +  +VVTYN++I  LCK   + +A  +L+ M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TYN ++ G+C +G+  +A     +++S+G  P VVTY++L+    K G    A 
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 406 DLVREMEERGITPSEVTY-----------------------------------TILIDSF 430
            +   M +RG+ P   TY                                   +ILI ++
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
                +++A  ++S M++ G +P+  TYG +I  LC  G +++A   F  M +  L P +
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +VYN +I G C      RA  L+ EM ++G+  N   ++S I   C++G+  E+E L   
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 551 MLKLGLKPSVSLYNIL 566
           M+++G+KP+V  YN L
Sbjct: 502 MVRIGVKPNVITYNTL 517



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 232/461 (50%), Gaps = 1/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSEN 167
           Y SI+  +  S    +A+ +  +M   GV P   T++ L+ ++ K+    +   +F S  
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ ++ ++G L++G    G L +   +L+ +   G  P+  +++ LI      G ++
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M   G+SP    YN LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K     +L  EM  R +  N + +N++I   CKE RV E+E+L + M   G+ 
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVITYN LI+G+C AG+ D+A +L + + S G  P+ VTY+ LI  + K    + A  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            +EME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++HGLC 
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                +A ++F ++    L+     +N+MI    K G +  A  L    +  GLVPN  +
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y      +   G   E + L   M   G      + N + R
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 215/472 (45%), Gaps = 3/472 (0%)

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           SS  P+  +  L ++      P   +  Y  ++D   K+    +A   F  M   G++P 
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVT--YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T+ +LL  +  K    +   L     R  +  D Y F ILI      G +++A  V +
Sbjct: 336 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFS 395

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ + G +PN V Y ++I   CK+G +E A + F ++ + GL      Y  LI GL    
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             +   E   +M   G+  +   +N +I  +C EG+V E  KLF+ M    V  NV+TYN
Sbjct: 456 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G C   ++ EA +LL  M   G+ PN +TY+ LI+G+C     + A  LF +++S+
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP ++TYN++++   +   +  A +L   + E G      TY I++    ++   + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M+  +       +  T+ ++I  L   G   EA  LF +     L PN   Y +M   
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
              +G      +L   M + G   +    +  +  L Q G+   A   L+ +
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 7/312 (2%)

Query: 268 YEKMQLNG---VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           Y +M   G   V+P L TY  LI   C  G++  GF     +  +    + + +  L+ G
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 325 LCKEMRVQEA-ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL---KSNG 380
           LC + R  +A + +L +M   G  PNV +YN L+ G CD   + +A  L + +   +  G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P VV+Y  +I  F K G+S  A     EM +RGI P  VTY  +I +  ++  M+KA 
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E+ + M K+G  PD  TY  ++HG C  G  KEA      M    +EP+ V Y++++   
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G    A ++   M ++GL P I +Y + +      G   E   LL+ M++ G+ P  
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371

Query: 561 SLYNILYRAKNN 572
            +++IL  A  N
Sbjct: 372 YVFSILICAYAN 383



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 2/380 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    KS   + A+ YF QM+D G+ P +  +NSL+  +     +++      E  
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++   +  +G  PNV+ Y +LI+G C  G ++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +GL     TY+ LI G  K    +D    +++M+ +GVSP + TYN ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  + +   +L+  +        + TYN ++ GLCK     +A ++   + +  + 
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +ID     G  D+A  LF    SNG  P+  TY ++       G  +    L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ME+ G T        ++   ++  ++ +A    S++ +  FS +  T  + I  L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767

Query: 468 KGNMKEASKLFNSMWETKLE 487
            G  +E  +     +++ +E
Sbjct: 768 GGKYQEYYRFLPEKYKSFIE 787


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 239/485 (49%), Gaps = 35/485 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----GWLF 163
           ++ S++ A+ KSR    A   F +M+  G +P    +N   IF+   CS ++      L 
Sbjct: 344 MFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN---IFIGSICSNEELPGSDLLE 400

Query: 164 FSENRCKVELDVYSFGILI---------KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            +E   K   ++   G+++         +  C AG  +KAFE++ ++   GF P+   Y+
Sbjct: 401 LAE---KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
            +I   C    +E+A +LF ++ + G+V + +TYT+LI    K GL +    ++++M  +
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
             +P++ TY  LIH Y    KV +  KLF+ M       NVVTY  LI G CK  ++ +A
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA 577

Query: 335 ----ERLLDQMKMAGI------------SPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
                R+   ++ + I            +PN+ITY  L+DG C A   ++A  L + +  
Sbjct: 578 CQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSV 637

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           NG  P+ + Y+ LI  F K G  + A ++  +M ERG  P+  TY+ LI+S  +   ++ 
Sbjct: 638 NGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDL 697

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
             ++ S M ++  +P+V  Y  +I GLC  G  +EA +L   M E    PN + Y  MI 
Sbjct: 698 VLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMID 757

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+ K G   + L L  +M  KG  PN  +Y   I   C  G   EA  LL++M +     
Sbjct: 758 GFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPR 817

Query: 559 SVSLY 563
            +S Y
Sbjct: 818 HISSY 822



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 261/616 (42%), Gaps = 88/616 (14%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P      F WASRQ G  HTP   + ++ LL     ++   + + L+      R      
Sbjct: 113 PEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELL--- 169

Query: 84  TPRSLLCHLTQL-------------------FPSSSNPVTKSRLYESIIDAHLKSRLSDQ 124
             R LL  L Q                    F   ++P T    Y ++I   L++   D 
Sbjct: 170 --RKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTT----YNALIQVFLRADKLDT 223

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           A     +M +SG R    T       + K+           +   +   D   +  ++ G
Sbjct: 224 AFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKE--EFVPDTVFYNRMVSG 281

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            CEA    +A ++L+++  +   PNVV Y  L+ GC   G + R K +   +   G    
Sbjct: 282 LCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPN 341

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC-NE---------- 293
           +  +  L+    K+      ++ ++KM   G  P    YN  I   C NE          
Sbjct: 342 REMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLEL 401

Query: 294 ------------------------------GKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                                         GK  + F++  EM  +    +  TY+ +I 
Sbjct: 402 AEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC   +V++A  L ++MK  GI P+V TY  LID FC AG   +A   F+++  +  +P
Sbjct: 462 FLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTP 521

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI A+ KA     A+ L   M   G  P+ VTYT LID   ++  ++KA ++Y
Sbjct: 522 NVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581

Query: 444 SLMQ----------------KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + MQ                    +P++ TYG L+ GLC    ++EA +L ++M     E
Sbjct: 582 ARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCE 641

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN +VY+ +I G+CK G    A  +  +M+E+G  PN+ +YSS I  L ++ +      +
Sbjct: 642 PNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKV 701

Query: 548 LNQMLKLGLKPSVSLY 563
           L++ML+    P+V +Y
Sbjct: 702 LSKMLENSCTPNVVIY 717



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 200/431 (46%), Gaps = 60/431 (13%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I A+LK+R    A   F  ML  G +P   T+ +L+    K+   DK    ++  +
Sbjct: 526 YTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585

Query: 169 CKVE---LDVY--------------SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
             +E   +D+Y              ++G L+ G C+A  + +A E+L+ +   G  PN +
Sbjct: 586 GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQI 645

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           +Y +LIDG CK G +E A+ +F K+ E G     +TY+ LI  LFK        +   KM
Sbjct: 646 VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEM 329
             N  +P++  Y  +I   C  GK  E ++L   ++  EV C  NV+TY  +I G  K  
Sbjct: 706 LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLM--LKMEEVGCYPNVITYTAMIDGFGKIG 763

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           ++++   L   M   G +PN ITY  LI+  C  G  D+A RL +++K       + +Y 
Sbjct: 764 KIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYR 823

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME------------ 437
            +I  F++   + +   L+ E+ E    P E  Y ILID+F+++  +E            
Sbjct: 824 KIIEGFNREFITSIG--LLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSS 881

Query: 438 -------------------------KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
                                    KAFE+Y+ M      P++ T+  LI GL   G  +
Sbjct: 882 PSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQ 941

Query: 473 EASKLFNSMWE 483
           EA +L +S+ +
Sbjct: 942 EALQLSDSICQ 952



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 163/392 (41%), Gaps = 44/392 (11%)

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LI  CC+NG    A     ++ + G  A+  TY  LI    +       F  + +M  +G
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                 T  C  +  C  G+  +   L ++    E   + V YN ++ GLC+    QEA 
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAM 292

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            +LD+M+     PNV+TY  L+ G    G+  +  R+ + + + G  P+   +N L+ A+
Sbjct: 293 DILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAY 352

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM------------------- 436
            K+ +   A  L ++M + G  P  + Y I I S   ++++                   
Sbjct: 353 CKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDL 412

Query: 437 ----------------------EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                                 +KAFE+   M   GF PD  TY  +I  LC    +++A
Sbjct: 413 GVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKA 472

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M +  + P+   Y ++I  +CK G   +A     EM      PN+ +Y+S I  
Sbjct: 473 FLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +  K  +A  L   ML  G KP+V  Y  L
Sbjct: 533 YLKARKVFDANKLFEMMLLEGSKPNVVTYTAL 564



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 34/259 (13%)

Query: 342 KMAGISPNVITYNKLIDGFC-DAGETDK-AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +  G S   + YN LI+  C +A   D+ + +   Q++ + +       N LI+   + G
Sbjct: 125 RQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNG 184

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF------------------- 440
              +A + +  +++ G   S  TY  LI  F+R+D ++ AF                   
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 441 -------------EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                        +  SL++K  F PD   Y  ++ GLC     +EA  + + M      
Sbjct: 245 CFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN V Y +++ G   +G   R  R+L  M  +G  PN   ++S +   C+   +  A  L
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 548 LNQMLKLGLKPSVSLYNIL 566
             +M+K G +P   LYNI 
Sbjct: 365 FKKMIKCGCQPGYLLYNIF 383


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 263/558 (47%), Gaps = 53/558 (9%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           A LP      L +       + T +S +++L +L+S   ++  + A  +  +++S  +  
Sbjct: 150 ANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVS---ANCPSVAANVFYEMLSKGVIP 206

Query: 81  SSFT---PRSLLCHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYF 129
           + +T       LC + ++  + S          V  S +Y+++I A  K    ++AL   
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
            +M   G  P  +TFN +                                  I G C   
Sbjct: 267 EEMFLMGCLPDVDTFNDV----------------------------------IYGLCRLN 292

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +++  ++++++   GF+PN + Y  L++G C+ G ++ A++L  K+           +T
Sbjct: 293 RIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFT 348

Query: 250 VLICGLFKNGLQKDGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           +LI G  K+G   +   F Y+KM  NG  P ++T+N LIH  C +G +     + ++M  
Sbjct: 349 ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA 408

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                N++TY TL+ G CK+ +++EA  +L++M   G   N++ YN L+   C  G+  K
Sbjct: 409 NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK 468

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +  ++   G  P + T+N LI    K    + A  L R+M   G+  + VTY  LI 
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIH 528

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           +F+R   +++A ++ + M   G   D  TY  LI   C  G  ++A  LF+ M    L P
Sbjct: 529 AFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP 588

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           +++  N++I G C+ G    AL LL +M  +GL P++ +Y+S I  LC+ G   EA  L 
Sbjct: 589 SNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLF 648

Query: 549 NQMLKLGLKPSVSLYNIL 566
           N++   G++P    YN L
Sbjct: 649 NKLQAEGIQPDAITYNTL 666



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 189/403 (46%), Gaps = 35/403 (8%)

Query: 102 PVTKSRLYESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           P      +  +I+ ++KS RL +   F + +M+ +G RP                     
Sbjct: 340 PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP--------------------- 378

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                        DV++F  LI G C+ G +  A +++N +   G +PN++ YT+L+DG 
Sbjct: 379 -------------DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK   +E A  +  ++   G       Y VL+  L KNG      +   +M   G  P +
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDI 485

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +T+N LI   C   +  +   L+ +M    V  N VTYNTLI    +   +QEA +L++ 
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G   + ITYN LI  FC  G T+KA  LF+++      PS ++ N+LI    + G 
Sbjct: 546 MLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +L+R+M  RG+ P  VTY  LI+   +  ++ +AF +++ +Q  G  PD  TY  
Sbjct: 606 VCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNT 665

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           LI   C  G   +A  L     E    PNDV + +++  + KE
Sbjct: 666 LICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 194/391 (49%), Gaps = 9/391 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL+   C +   N  +E+L++    G  P V  +  ++   C   +++ A  L R + + 
Sbjct: 182 ILVSANCPSVAANVFYEMLSK----GVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKH 237

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L K     +  +  E+M L G  P + T+N +I+  C   ++ EG
Sbjct: 238 GCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEG 297

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R    N +TY  L+ GLC+  +V EA+ LL+++     +PN + +  LI+G
Sbjct: 298 AKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILING 353

Query: 360 FCDAGETDKAFR-LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +  +G  D+A   L++++  NG  P V T+N LI    K G    A D+V +M   G TP
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TYT L+D F + + +E+A  + + M   GF  ++  Y VL+  LC  G + +A  + 
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +   +P+   +N +IFG CK      AL L  +M   G++ N  +Y++ I    + 
Sbjct: 474 GEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRG 533

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G   EA  L+N ML  G       YN L +A
Sbjct: 534 GAIQEALKLVNDMLFRGCPLDEITYNGLIKA 564



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 36/216 (16%)

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGIT----------------------------- 417
            Y+VLI     A   K+   L+ +++E GI                              
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 418 -------PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
                  P+  +Y +++D  V ++    A  ++  M   G  P VYT+GV++  LCM   
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +  A  L   M +    PN VVY  +I    K      AL+LL EM   G +P++ +++ 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  LC+  +  E   L+++ML  G  P+   Y +L
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVL 319



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL---LIFVIKSCSFDKGWLFFS 165
           Y  +I A  K   +++AL  F +M+   + P + + N L   L  V K C+  +  L   
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE--LLRD 615

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                +  DV ++  LI G C+ G++ +AF + N+L+  G  P+ + Y +LI   C+ G 
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
            + A +L  +  E   +    T+ +L+    K   +++G  F
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISF 717


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 202/381 (53%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           VE D Y++  LI+G C  G    A  VL+++      P+VV YT L++  CK    ++A 
Sbjct: 28  VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY V++ G+ + G   D  EF + +   G  P+  +YN ++   
Sbjct: 88  KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +  +  +L  EM  +    NVVT+N LI  LC++  V+ A  +L+Q+   G +PN 
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+  FC   + DKA    + + S G  P +V+YN L+ A  ++G   +A +L+ +
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++G  P  ++Y  +ID   ++   ++A E+ + M   G  PD+ TY  +  GLC +  
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++A + F  + +  + PN V+YN +I G CK   ++ A+ L   M   G +PN ++Y+ 
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387

Query: 531 TIGVLCQDGKWPEAEVLLNQM 551
            I  L  +G   EA  LL+++
Sbjct: 388 LIEGLAYEGLIKEARDLLDEL 408



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 3/390 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  ++ G C AG L+ A  ++    EM   P+   Y +LI G C  G    A  +  ++
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLV---AEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                V    TYT+L+    K    K   +  ++M+  G +P + TYN +++  C EG+V
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  +    +       N V+YN ++ GLC   R ++AE L+ +M   G  PNV+T+N L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I   C  G  + A  +  Q+   G +P+ ++YN L+ AF K      A   +  M  RG 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  V+Y  L+ +  RS +++ A E+   ++  G +P + +Y  +I GL   G  KEA +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L N M    L+P+ + Y+ +  G C+E     A+R  G++ + G+ PN   Y++ I  LC
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +   A  L   M+  G  P+ S Y IL
Sbjct: 359 KRRETHSAIDLFAYMIGNGCMPNESTYTIL 388



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 197/430 (45%), Gaps = 41/430 (9%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R L+++M     A     +++ + GR  +++      L  L ++      P   +  Y  
Sbjct: 20  RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANA-----LAVLDEMLRRRCVPDVVT--YTI 72

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +++A  K     QA+    +M D G  P                                
Sbjct: 73  LLEATCKRSGYKQAMKLLDEMRDKGCTP-------------------------------- 100

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D+ ++ +++ G C+ G ++ A E L  L   G  PN V Y  ++ G C     E A+ 
Sbjct: 101 --DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEE 158

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++G+ G      T+ +LI  L + GL +   E  E++   G +P+  +YN L+H +C
Sbjct: 159 LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 218

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            + K+ +     D M  R    ++V+YNTL+  LC+   V  A  LL Q+K  G +P +I
Sbjct: 219 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 278

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +IDG   AG+T +A  L N++ S G  P ++TY+ +     +    + A     ++
Sbjct: 279 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           ++ GI P+ V Y  +I    +  +   A ++++ M  +G  P+  TY +LI GL  +G +
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398

Query: 472 KEASKLFNSM 481
           KEA  L + +
Sbjct: 399 KEARDLLDEL 408



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           + YN ++ G C   ++  A RL+ +M    + P+  TYN LI G C  G T  A  + ++
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +      P VVTY +L+ A  K    K A  L+ EM ++G TP  VTY ++++   +   
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A E    +   G  P+  +Y +++ GLC     ++A +L   M +    PN V +NM
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I   C++G    AL +L ++ + G  PN  SY+  +   C+  K  +A   L+ M+  G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 556 LKPSVSLYNILYRA 569
             P +  YN L  A
Sbjct: 238 CYPDIVSYNTLLTA 251



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 1/308 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   +    D A+ +   +   G  P + ++N +L  +  +  ++       E  
Sbjct: 105 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 164

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    +V +F +LI   C  G +  A EVL Q+ + G +PN + Y  L+   CK   ++
Sbjct: 165 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 224

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A      +   G      +Y  L+  L ++G      E   +++  G +P L +YN +I
Sbjct: 225 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 284

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 GK  E  +L +EM  + +  +++TY+T+  GLC+E R+++A R   +++  GI 
Sbjct: 285 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 344

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN + YN +I G C   ET  A  LF  +  NG  P+  TY +LI   +  G  K A DL
Sbjct: 345 PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 404

Query: 408 VREMEERG 415
           + E+  R 
Sbjct: 405 LDELCSRA 412



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 1/266 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           +M   G  P   TFN L+ F+ +    +       +  +     +  S+  L+   C+  
Sbjct: 162 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 221

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            ++KA   L+ +   G  P++V Y +L+   C++G+++ A  L  ++ + G      +Y 
Sbjct: 222 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 281

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I GL K G  K+  E   +M   G+ P + TY+ +    C E ++ +  + F +++  
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N V YN +I GLCK      A  L   M   G  PN  TY  LI+G    G   +A
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAF 395
             L ++L S      ++  +++  AF
Sbjct: 402 RDLLDELCSRAGEEILLDVHLIDVAF 427


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 247/540 (45%), Gaps = 47/540 (8%)

Query: 73  IISGRITSS-SFTPRSLLCHLTQL-----FPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
           ++ GR  +S  + P  LL H   L     F SSSN   +++  +S+ D  LKS   + AL
Sbjct: 1   MLRGRARASLHWFPLLLLPHFGSLSNSTHFRSSSNFTNRAQFLDSMRD--LKSE--EAAL 56

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGC 185
            +FH+M+     PR   F  L   ++K   +              ++ DVY+  I+I   
Sbjct: 57  SFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCL 116

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C        F VL  + ++G  P VV + +LI+G C  G++ RA      + ++G  +  
Sbjct: 117 CHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNS 176

Query: 246 HTYTVLICGLFKNG-------------------------------LQKDG-----FEFYE 269
           +TY  +I GL K G                               L KDG        + 
Sbjct: 177 YTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFS 236

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
            M   G+ P L  YN LIH  CN G+  E   L   M  + +  NV T+N L+   CK+ 
Sbjct: 237 GMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDG 296

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            +  A+ ++  M   G+ P+V+TYN +I G C   +   A ++F  +   G  P++VTY+
Sbjct: 297 MISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYS 356

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            LI  + K  N   A  L+ EM   G+ P  VT++ LI  F ++   E A E++  M + 
Sbjct: 357 SLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEH 416

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
              P++ T  +++ GL       EA  LF  M +  LE N V+YN+++ G C  G    A
Sbjct: 417 DQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDA 476

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             L   +  KG+  ++ +Y++ I  LC++G   +AE LL +M + G  P+   YN+  R 
Sbjct: 477 QELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRG 536



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 189/363 (52%), Gaps = 1/363 (0%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI-YTSLIDGCCKNGDIERAKMLFR 234
           Y++G +I G C+AGD + A   L +++      +VVI Y++++D  CK+G +  A  LF 
Sbjct: 177 YTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFS 236

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +   G+      Y  LI GL   G  K+       M   G+ P++ T+N L+  +C +G
Sbjct: 237 GMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDG 296

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            +S    +   M H  V  +VVTYN++I G C   ++ +A ++ + M   G  PN++TY+
Sbjct: 297 MISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYS 356

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G+C     +KA  L  ++ ++G +P VVT++ LI  F KAG  + A +L   M E 
Sbjct: 357 SLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEH 416

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P+  T  I++D   +     +A  ++  M+K     +V  Y +++ G+C  G + +A
Sbjct: 417 DQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDA 476

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF+ +    ++ + V Y  MI G CKEG    A  LL +M E G +PN  +Y+  +  
Sbjct: 477 QELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRG 536

Query: 535 LCQ 537
           L Q
Sbjct: 537 LLQ 539



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 223/474 (47%), Gaps = 17/474 (3%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSL---LCHLTQ----------LFPSSSNPVTKSRLY 109
           +A   +LI  I S  I    +T   +   LCHL            +F    +P   +  +
Sbjct: 87  YATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVT--F 144

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
            ++I+         +A  +   + D G +  S T+ +++  + K+       L+  + + 
Sbjct: 145 ATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKG 204

Query: 170 K-VELDVY-SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +LDV  ++  ++   C+ G + +A  + + +   G  P++V Y SLI G C  G  +
Sbjct: 205 RNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWK 264

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +   G++    T+ VL+    K+G+          M   GV P + TYN +I
Sbjct: 265 EATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVI 324

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   ++ +  K+F+ M H+    N+VTY++LI G CK   + +A  LL +M  +G++
Sbjct: 325 SGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLN 384

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+T++ LI GFC AG+ + A  LF  +  + Q P++ T  +++    K      A  L
Sbjct: 385 PDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISL 444

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REME+  +  + V Y I++D       +  A E++S +   G   DV  Y  +I GLC 
Sbjct: 445 FREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCK 504

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           +G + +A  L   M E    PN+  YN+ + G  +  +  R+ + L  M  KGL
Sbjct: 505 EGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGL 558



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 9/359 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y +I+D+  K  +  +AL  F  M   G++P    +NSL+  +   C+F + W     L 
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGL---CNFGR-WKEATTLL 270

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +  R  +  +V +F +L+   C+ G +++A  ++  +  +G  P+VV Y S+I G C  
Sbjct: 271 GNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLL 330

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +  A  +F  +   G +    TY+ LI G  K            +M  +G++P + T+
Sbjct: 331 SQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTW 390

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + LI  +C  GK     +LF  M   +   N+ T   ++ GL K     EA  L  +M+ 
Sbjct: 391 STLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEK 450

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             +  NV+ YN ++DG C  G+ + A  LF+ L S G    VV Y  +I+   K G    
Sbjct: 451 MNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDD 510

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           A +L+ +MEE G  P+E TY + +   ++  D+ ++ +   LM+  G S D  T  +LI
Sbjct: 511 AENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 156/369 (42%), Gaps = 19/369 (5%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFH 130
           +I+      S     ++C    LF   ++   +  L  Y S+I          +A     
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAG 189
            M+  G+ P   TFN L+    K     +            VE DV ++  +I G C   
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +  A +V   +   GF PN+V Y+SLI G CK  +I +A  L  ++   GL     T++
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT--------YNCLIHEYCNEGKVSEGFK 301
            LI G  K G  +   E +  M  +   P+L T        + C  H        SE   
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFH--------SEAIS 443

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM    +  NVV YN ++ G+C   ++ +A+ L   +   GI  +V+ Y  +I G C
Sbjct: 444 LFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G  D A  L  +++ NG  P+  TYNV +R   +  +   ++  +  M+ +G++    
Sbjct: 504 KEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADAT 563

Query: 422 TYTILIDSF 430
           T  +LI  F
Sbjct: 564 TTELLISYF 572



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 21/299 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           +  ++D   K  +  +A      M+  GV P   T+NS++           G    S+  
Sbjct: 285 FNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVI----------SGHCLLSQMG 334

Query: 169 CKVEL-----------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             V++           ++ ++  LI G C+  ++NKA  +L ++   G +P+VV +++LI
Sbjct: 335 DAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLI 394

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G CK G  E AK LF  + E        T  +++ GLFK     +    + +M+   + 
Sbjct: 395 GGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLE 454

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            ++  YN ++   C+ GK+++  +LF  +  + +  +VV Y T+I GLCKE  + +AE L
Sbjct: 455 LNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENL 514

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L +M+  G  PN  TYN  + G     +  ++ +    +K  G S    T  +LI  FS
Sbjct: 515 LMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFS 573


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 233/460 (50%), Gaps = 13/460 (2%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRC 169
           +++D   ++R S+Q +  F ++     +P + ++  L+  + ++   DK     +E  R 
Sbjct: 5   ALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMARE 64

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           K+  DV+++ ++I   C+A  +++A E    + E    P+VV Y +L+ G CKNG + +A
Sbjct: 65  KLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQA 120

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF  +   G+  +  TYT LI    K    +  +   + M     SP++Y+Y  +I+ 
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C   KV + ++LF+EM+      + VTYNTLI GLC + R+ EA+ LL  M   G  P+
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPD 240

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            IT+  LI+G C      +AF LF  +   G +P +VT+ VL+         + A  +VR
Sbjct: 241 KITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVR 300

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                    + + YT +     R    ++A  +   M + G  P+V TY     GL   G
Sbjct: 301 NYP--ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL---G 355

Query: 470 NMKE---ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + KE   A + F  M E  +EP+ V YN+++ G+CK      A +++  M++ GL PNI 
Sbjct: 356 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIV 415

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y++ +G  C+ GK      LL+ M+  G +P V+ ++ L
Sbjct: 416 TYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 455



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 211/462 (45%), Gaps = 7/462 (1%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           ++F     P   S  Y  ++ A  ++   D+A     +M    + P   T+N ++  + K
Sbjct: 25  RIFSQDCKPNALSYCY--LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCK 82

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
           +    +   FF       E DV ++  L+ G C+ G + +A  +   +E  G +P+ V Y
Sbjct: 83  ARRISRAIEFFET---MPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTY 139

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T+LID  CK    E A  L + +       T ++Y  +I GL KN      ++ +E+M+L
Sbjct: 140 TTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKL 199

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            G  P   TYN LIH  C + ++ E   L   M       + +T+  LI GLC   R++E
Sbjct: 200 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKE 259

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A  L   M   G +P+++T+  L+   C   +   A  +     +  +  +V+ Y  + R
Sbjct: 260 AFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPE--AVILYTPIFR 317

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              +      A+ L+++M  RG+ P+ VTYT          +  +A+  +  M + G  P
Sbjct: 318 ELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP 377

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D+  Y VL+ G C    +  A K+   M ++ L PN V YN ++  +C++G       LL
Sbjct: 378 DMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELL 437

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
             M  +G  P++A++S+ +  L   G+   A   LN  +  G
Sbjct: 438 HTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 123/282 (43%), Gaps = 31/282 (10%)

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VT N L+  L +  R ++   +  ++      PN ++Y  L+   C  G+ DKA     +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 376 LKSNGQSPSVVTYNVLIRAFSKA-------------------------------GNSKMA 404
           +      P V TYNV+I    KA                               G    A
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L   ME  GITPS+VTYT LID F +    E A+ +  LM     SP VY+Y  +I+G
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    + +A +LF  M     +P+ V YN +I G C +   + A  LL  M E G  P+
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPD 240

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++++ I  LC   +  EA VL   M K G  P +  + +L
Sbjct: 241 KITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVL 282


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 214/436 (49%), Gaps = 41/436 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D Y+F  LI G C    ++ A ++ +++   GF+ +VV Y +LI+G C+ G I+ A  LF
Sbjct: 45  DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELF 104

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ +  +    H Y  L+ GL K G  ++G     +M+  G  PS   Y  ++   C E
Sbjct: 105 GEMDQPDM----HMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWE 160

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            K  E  ++  EM  + +A  VVT   +I   CKE R+ +A R+L+ MK+ G  PNV TY
Sbjct: 161 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 220

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR-------------------- 393
           N L+ GFC+ G+  KA  L N+++  G +P  VTYN+LIR                    
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 280

Query: 394 ---------------AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                          A  K G +  A  L   +E RGI P+ VT+  LI+   +S  ++ 
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLC-MKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           A++    M  +G +PD YTY   I  LC MKG+ +E       M +  ++P+ V Y ++I
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS-QEGLSFIGEMLQKDVKPSTVNYTIVI 399

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
               KE N     R  GEM   G  P++ +Y++++   C +G+  EAE +L +M K G+ 
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459

Query: 558 PSVSLYNILYRAKNNI 573
                YN L     +I
Sbjct: 460 VDTMAYNTLMDGHASI 475



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 228/496 (45%), Gaps = 40/496 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I +  +      AL Y   M+ SG RP + TFNSL++   ++   D     F +  
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +    DV S+  LI+G CE G +++A E+  ++++    P++ +Y +L+ G CK G  E
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129

Query: 228 RAKMLFRKIGELGLVATQHTY-----------------------------------TVLI 252
              ++ R++ ELG   +   Y                                   T +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
               K G   D     E M+L G  P+++TYN L+  +CNEGKV +   L ++MR   V 
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + VTYN LI G C +  ++ A RLL  M+  G+  +  TYN LI+  C  G TD+A  L
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ L++ G  P+ VT+N LI    K+G   +A   + +M   G TP   TY+  I+   +
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
               ++       M +    P    Y ++IH L  + N    ++ +  M  +   P+ V 
Sbjct: 370 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 429

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y   +  YC EG    A  +L EM++ G+  +  +Y++ +      G+   A  +L QM 
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489

Query: 553 KLGLKPSVSLYNILYR 568
            +   P+   Y IL R
Sbjct: 490 SVASVPNQFTYFILLR 505



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 185/390 (47%), Gaps = 4/390 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I+  C   DL  A   L+ +   G+ P+   + SLI G C+   ++ A+ LF K+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G      +Y  LI G  + G   +  E + +M      P ++ Y  L+   C  G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            EG  +   M+      +   Y  ++   C E + +EAE +L +M   G++P V+T   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+ +C  G    A R+   +K  G  P+V TYN L++ F   G    A  L+ +M   G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  VTY +LI        +E AF +  LM+  G   D YTY  LI+ LC  G   +A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           LF+S+    ++PN V +N +I G CK G    A + L +M   G  P+  +YSS I  LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +     E    + +ML+  +KPS   Y I+
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 398



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 214/463 (46%), Gaps = 21/463 (4%)

Query: 111 SIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           ++I+A+ K  R+SD AL     M   G +P   T+N+L+          K     ++ R 
Sbjct: 187 AVINAYCKEGRMSD-ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C V  D  ++ +LI+G C  G +  AF +L  +E  G   +   Y +LI+  CK+G  ++
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF  +   G+     T+  LI GL K+G     ++F EKM   G +P  YTY+  I 
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C      EG     EM  ++V  + V Y  +I  L KE       R   +M  +G +P
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V+TY   +  +C  G  ++A  +  ++  NG +   + YN L+   +  G +  A  ++
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485

Query: 409 REMEERGITPSEVTYTILIDSFVR-----------------SDDMEKAFEMYSLMQKSGF 451
           ++M      P++ TY IL+   VR                 + ++   F ++ +M+K+ F
Sbjct: 486 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+  TY  ++ G    G  +EA+ L + M E  +  N+ +Y  ++  +CK      A  
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 605

Query: 512 LLGEMNEKGLVPNIASYSSTI-GVLCQDGKWPEAEVLLNQMLK 553
           L+  M + G +P++ SY   + G++C+       E+ +N   K
Sbjct: 606 LVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWK 648



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 216/479 (45%), Gaps = 18/479 (3%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y +++D     R + +A     +M + G+ P   T  +++    K            
Sbjct: 147 TRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 206

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             + +  + +V+++  L++G C  G ++KA  +LN++   G +P+ V Y  LI G C +G
Sbjct: 207 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDG 266

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            IE A  L R +   GL+A Q+TY  LI  L K+G        ++ ++  G+ P+  T+N
Sbjct: 267 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 326

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+  C  GKV   +K  ++M       +  TY++ I  LCK    QE    + +M   
Sbjct: 327 SLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 386

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P+ + Y  +I             R + ++ S+G +P VVTY   +RA+   G    A
Sbjct: 387 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 446

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH- 463
            +++ EM + G+T   + Y  L+D        + A  +   M      P+ +TY +L+  
Sbjct: 447 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 506

Query: 464 ----------------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
                           G+     + +   LF+ M + +  PN   Y+ ++ G+ ++G + 
Sbjct: 507 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 566

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  L+  M E  +  N   Y++ +   C+  ++ +A VL+  M++ G  P +  Y  L
Sbjct: 567 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHL 625



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 4/264 (1%)

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           RH   A    TYN +I  LC+   +  A R L  M  +G  P+  T+N LI G+C   + 
Sbjct: 3   RHAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 62

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A  LF+++   G +  VV+Y  LI  F + G    A +L  EM++    P    Y  L
Sbjct: 63  DVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAAL 118

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +    ++   E+   M   M++ G+ P    Y  ++   C +   KEA ++   M+E  L
Sbjct: 119 VKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGL 178

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P  V    +I  YCKEG    ALR+L  M  +G  PN+ +Y++ +   C +GK  +A  
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238

Query: 547 LLNQMLKLGLKPSVSLYNILYRAK 570
           LLN+M   G+ P    YN+L R +
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQ 262



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 162/359 (45%), Gaps = 24/359 (6%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++  +   P T +  Y S I+   K + S + L +  +ML   V+P +  +  ++  +
Sbjct: 345 LEKMVSAGCTPDTYT--YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 402

Query: 152 IKSCSFD---KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
           +K  ++    + W     + C    DV ++   ++  C  G LN+A  VL ++ + G + 
Sbjct: 403 LKERNYGLVARTWGEMVSSGCNP--DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---------------- 252
           + + Y +L+DG    G  + A  + +++  +  V  Q TY +L+                
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 520

Query: 253 -CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
             G++K     D F  ++ M+ N   P+  TY+ ++  +  +G+  E   L   M+   +
Sbjct: 521 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 580

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           + N   Y  L+   CK  R  +A  L+  M   G  P++++Y  L+ G    G+TDKA  
Sbjct: 581 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKE 640

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +F   +    SP  + + V+I    K G+S ++ +++  +E     PS  TY +L +  
Sbjct: 641 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 18/269 (6%)

Query: 95  LFPSSSNPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           L   S N VT   + Y +++D H     +D A+    QM      P   T+  LL  ++ 
Sbjct: 450 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV- 508

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
                         R ++  DV    +   G  +A +L   F + + +++  F PN   Y
Sbjct: 509 --------------RMRLVEDV--LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 552

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           +S+++G  ++G  E A  L   + E  +   +  YT L+    K+    D +     M  
Sbjct: 553 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 612

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G  P L +Y  L+     EG+  +  ++F   R ++ + + + +  +I GL K+     
Sbjct: 613 HGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 672

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCD 362
           +  ++  ++     P+  TY  L +   D
Sbjct: 673 SREMIIMLERMNCRPSHQTYAMLTEELPD 701


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 229/467 (49%), Gaps = 1/467 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++NP+     +  +  A ++ +     +    QM  +G+     +   L+    + C  D
Sbjct: 84  NTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVD 143

Query: 159 KGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            G+    +  +  +E +V +F  LI G C  G + +A E+ + +   G+ PNV  Y+ +I
Sbjct: 144 YGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIII 203

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C+ G       L   +  +G       Y  ++  L K+ L  +    + KM+  G+ 
Sbjct: 204 KGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGIL 263

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TY  LIH   N G+  E F L +EM+   +  ++V ++ LI  +CKE  V EA  +
Sbjct: 264 PTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVI 323

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L  M   G+ P+V TYN L++G+C   E  +A ++F  + S G+ P V ++++L+  + K
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A     A  L  EM  RG+ P  V+Y  LI    ++    +A E++  M  +G+ P++ T
Sbjct: 384 AKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y +L+  L  +G + +A  LF +M  + L+P+ V YN+MI G CK G    A  L  E++
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            KGL PN    + TI  +C+ G   EA     QM K    P+    N
Sbjct: 504 VKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 193/392 (49%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  FG L               +  Q+E  G S +V+  T LI+  C+   ++    +  
Sbjct: 91  IVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLG 150

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LGL     T++ LI G    G      E ++ M   G  P++++Y+ +I   C  G
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVG 210

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K +E  KL + M+      +VV YNT++  LCK+  V EA  +  +MK  GI P V+TY 
Sbjct: 211 KTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYT 270

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G  + G   +AF L N++K     P +V ++VLI    K G    A  +++ M E 
Sbjct: 271 SLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P   TY  L++ +    ++ +A +++ +M   G  PDV+++ +L++G C    + EA
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF+ M    L P+ V YN +I G C+      A  L  +M+  G  PN+ +YS  +  
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDC 450

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L + G   +A  L   M   GLKP +  YNI+
Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 132/271 (48%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +++    F+ M +     ++V +  L   L +    +    L  QM+MAGIS +V++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+ FC     D  F +  ++   G  P+V+T++ LI  F   G    A +L   M  RG
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+  +Y+I+I    R     +  ++   M+  G  PDV  Y  ++  LC    + EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +F  M  T + P  V Y  +I G    G    A  LL EM    ++P++ ++S  I ++
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C++G+  EA V+L  M ++G++P V+ YN L
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTL 342



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           + A   FN + +    PS+V +  L  A  +  + K    L ++ME  GI+   ++ TIL
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ F R   ++  F +   + K G  P+V T+  LI+G C++G +  A +LF+ M     
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN   Y+++I G C+ G +   ++LL  M   G  P++  Y++ +  LC+D    EA  
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +  +M   G+ P+V  Y  L     N+
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNL 279



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%)

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           ++  A   ++ M  +   P +  +G L   L    + K    L   M    +  + +   
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I  +C+  +      +LG++ + GL PN+ ++S+ I   C +GK   A  L + M+  
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 555 GLKPSVSLYNILYRA 569
           G KP+V  Y+I+ + 
Sbjct: 191 GYKPNVHSYSIIIKG 205


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 220/444 (49%), Gaps = 4/444 (0%)

Query: 129  FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
            F +M   GV P     N +L  +  +  +D       E     +E  + ++  L+    +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 188  AGDLNKAFEVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
             G  +K   +L ++E  G    PN V Y  +I G  + GD+E A  L   +  L   A+ 
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASS 1190

Query: 246  HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             TY  LI GL   G  K  ++   +M+  G+ P++ TYN +IH     G V      F E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 306  MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
            MR   +  +V+TYN+L+ G CK   ++EA  L   ++ AG++P V+TYN LIDG+C  G+
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 366  TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             ++A  L  ++   G  P+V TY +L++      +  MA +   EM  +G+ P    Y  
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370

Query: 426  LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
             I + +   D+ +AFE+  ++   G S D  TY +LIHGLC  GN+K+A +L   M    
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430

Query: 486  LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
            L+P+ + Y  +I  +C+ G    A ++   M   GL+P+  +++  I   C+ G    A 
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490

Query: 546  VLLNQMLKLGLKPSVSLYNILYRA 569
                +ML+ G++P+   YN+L  A
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHA 1514



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 220/463 (47%), Gaps = 2/463 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            Y +++D+ LK    D+      +M    SG  P   T+N ++  + +    ++       
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181

Query: 167  NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             R   +   +++  LI G    G + K +++  ++E  G  P VV Y ++I G  ++G +
Sbjct: 1182 MRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLV 1241

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            E A++ F ++  +GL+    TY  L+ G  K G  K+    +  ++  G++P++ TYN L
Sbjct: 1242 EAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIL 1301

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
            I  YC  G + E   L +EM  +    NV TY  L+ G      +  A    D+M   G+
Sbjct: 1302 IDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGL 1361

Query: 347  SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             P+   YN  I      G+  +AF L   L   G S   VTYN+LI    K GN K A +
Sbjct: 1362 QPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKE 1421

Query: 407  LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            L  +M   G+ P  +TYT LI +      + +A ++++ M   G  P   T+ V+IH  C
Sbjct: 1422 LQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYC 1481

Query: 467  MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             +GN+  A   F  M E  +EPN++ YN++I   C+ G +  A     EM E+GLV N  
Sbjct: 1482 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKY 1541

Query: 527  SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y+  I   C+ G W +A     +M + G+ P    +  L + 
Sbjct: 1542 TYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 209/386 (54%), Gaps = 7/386 (1%)

Query: 131  QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAG 189
            +M + G+ P   T+N+++  +++S   +   + F+E R    L DV ++  L+ G C+AG
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 1274

Query: 190  DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            +L +A  +   L   G +P V+ Y  LIDG C+ GD+E A++L  ++GE G +    TYT
Sbjct: 1275 NLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 1334

Query: 250  VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +L+ G           EF+++M   G+ P  + YN  I      G ++  F+L + +   
Sbjct: 1335 ILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLE 1394

Query: 310  EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA--GISPNVITYNKLIDGFCDAGETD 367
             ++ + VTYN LI GLCK   +++A+ L  QMKM   G+ P+ ITY  LI   C+ G   
Sbjct: 1395 GISSDTVTYNILIHGLCKTGNLKDAKEL--QMKMVSNGLQPDCITYTCLIHAHCERGLLR 1452

Query: 368  KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            +A ++FN + S+G  PS VT+ V+I A+ + GN   A    R+M E G+ P+E+TY +LI
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 1512

Query: 428  DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
             +  R    + A   +  M + G   + YTY +LI G C  GN ++A + +  M +  + 
Sbjct: 1513 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIH 1572

Query: 488  PNDVVYNMMIFGYCKEGNSYRALRLL 513
            P+ + +  ++ G+  +G+ +  +  L
Sbjct: 1573 PDYLTHKALLKGF--DGHVHHTIEYL 1596



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 3/273 (1%)

Query: 303  FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            F EM    VA +V   N ++  L    R  +   + ++M   GI P+++TYN L+D F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 363  AGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             G  DK   L  ++++ G    P+ VTYNV+I   ++ G+ + A++LV  M       S 
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 1190

Query: 421  VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             TY  LI   +    ++K +++   M+  G  P V TY  +IHGL   G ++ A   F  
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 481  MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            M    L P+ + YN ++ GYCK GN   AL L G++   GL P + +Y+  I   C+ G 
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 541  WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
              EA +L  +M + G  P+V  Y IL +   N+
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 1343


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 229/497 (46%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI+DA  K+R  D+A     QM+D GV P   T+ +++     S  + +    F +  
Sbjct: 302 YNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361

Query: 169 CKVELD-VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  +  + +F   +   C+ G    A E+   +   G  P++V Y+ L+ G    G   
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               LF  + + G+VA  H + +LI    K G+  +    + +MQ  GV P + TY+ LI
Sbjct: 422 DMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLI 481

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG----------------------- 324
             +C  G++++  + F +M    +  N V Y++LI G                       
Sbjct: 482 SAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIP 541

Query: 325 -------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                        LC E RV +A  + + +   G  P ++T+N LIDG+C  G+ +KAF 
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + + + S G  P VVTYN L+  + K+G       L REM  + + P+ VTY+I++D   
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLF 661

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            +     A +M+  M  SG + D+ TY +L+ GLC      EA  LF+ +     + +  
Sbjct: 662 HAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 721

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           + N +I    K      A  L   ++  GLVPN+++Y   I  L ++G   EA+ + + M
Sbjct: 722 ILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSM 781

Query: 552 LKLGLKPSVSLYNILYR 568
            K G  PS  L N + R
Sbjct: 782 EKSGCAPSSRLLNDIIR 798



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 264/570 (46%), Gaps = 84/570 (14%)

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYE------------------SIIDA 115
           I  R +SSS TP S      +LF SSS P+ + +L                    + + A
Sbjct: 24  IPRRQSSSSTTPMSG----RRLFSSSSTPMPRLQLLPRRSSSSTSPTSRCWDPQVAFVAA 79

Query: 116 HLKSRL----SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-----SCSFDKGWLFFSE 166
             + R     +D A   F ++L  G    +   N  L  + +     SCS     +    
Sbjct: 80  IARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALF 139

Query: 167 NR-CKVE-------LDVYSFGILIKGCCEA--GDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           NR C+ E       L V+++GIL+  CC A   DL  AF    +L   G     +   + 
Sbjct: 140 NRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAF--FARLLRAGLRTRTIEANTF 197

Query: 217 IDGCC--KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +   C  K  D E   +L  ++ +LG V    +Y  +I  L  +   ++  +  ++M   
Sbjct: 198 LKCLCHAKRTD-EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKE 256

Query: 275 G--VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           G   SP + ++N +IH +  +G+VS+   L +EM  + V  +VVTYN+++  LCK   + 
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +AE +L QM   G+ P+ +TY  +I G+  +G   ++ ++F ++ S G  P +VT+N  +
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYT---------------------------- 424
            +  K G SK A ++ + M  +G  P  V+Y+                            
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436

Query: 425 -------ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                  ILI +  +   M++A  +++ MQ  G  PDV TY  LI   C  G + +A + 
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLC 536
           F+ M    LEPN VVY+ +I G+C  G+  +A  L+ EM  KG+  PNI  +SS I  LC
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +G+  +A  + N ++ +G +P++  +N L
Sbjct: 557 NEGRVMDAHDVFNLVIHIGDRPTIVTFNSL 586



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 228/500 (45%), Gaps = 39/500 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVR--PRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y ++I +      S +AL    +M   G R  P   +FN+++    K     K     +E
Sbjct: 230 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINE 289

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K VE DV ++  ++   C+A  ++KA  VL Q+ + G  P+ + YT++I G   +G 
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + +  +FRK+   GL+    T+   +  L K+G  KD  E ++ M   G  P L +Y+ 
Sbjct: 350 WKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H Y  EG+ ++   LF  M  + +  N   +N LI    K   + EA  +  +M+  G
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG 469

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+V+TY+ LI  FC  G    A   F+Q+ S G  P+ V Y+ LI  F   G+   A 
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAK 529

Query: 406 DLVREMEERGIT------------------------------------PSEVTYTILIDS 429
           +LV EM  +GI                                     P+ VT+  LID 
Sbjct: 530 ELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDG 589

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           +     MEKAF +   M   G  PDV TY  L+ G C  G + +   LF  M   K++P 
Sbjct: 590 YCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 649

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y++++ G    G +  A ++  EM + G   +I +Y   +  LC++    EA  L +
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 709

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           ++  +  K  +++ N +  A
Sbjct: 710 KLGAMDCKFDITILNTVINA 729



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 193/418 (46%), Gaps = 37/418 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           FH M D G+    + FN L+    K    D+  L F+E + + V  DV ++  LI   C 
Sbjct: 427 FHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L  A E  +Q+  +G  PN V+Y SLI G C +GD+ +AK                 
Sbjct: 487 MGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAK----------------- 529

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
                             E   +M   G+  P++  ++ +IH  CNEG+V +   +F+ +
Sbjct: 530 ------------------ELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            H      +VT+N+LI G C   ++++A  +LD M   GI P+V+TYN L+ G+C +G+ 
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D    LF ++      P+ VTY++++     AG +  A  +  EM + G      TY IL
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +    R+D  ++A  ++  +       D+     +I+ L      +EA+ LF ++  + L
Sbjct: 692 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGL 751

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            PN   Y +MI    KEG+   A  +   M + G  P+    +  I +L Q G   +A
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 92  LTQLFPSSSNP--VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           +  LF S ++   V     +  +I AH K  + D+A+  F +M   GVRP   T+++L+ 
Sbjct: 423 MNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLIS 482

Query: 150 FVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS- 207
              +          FS+     +E +   +  LI G C  GDL KA E+++++   G   
Sbjct: 483 AFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPR 542

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PN+V ++S+I   C  G +  A  +F  +  +G   T  T+  LI G    G  +  F  
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
            + M   G+ P + TYN L+  YC  GK+ +G  LF EM H++V    VTY+ ++ GL  
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             R   A+++  +M  +G + ++ TY  L+ G C    TD+A  LF++L +      +  
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            N +I A  K    + A+DL   +   G+ P+  TY ++I + ++   +E+A  M+S M+
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           KSG +P       +I  L  KG++ +A
Sbjct: 783 KSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 4/378 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I A  +  RL+D A+  F QM+  G+ P +  ++SL+          K     SE 
Sbjct: 477 YSTLISAFCRMGRLAD-AMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 168 RCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             K     ++  F  +I   C  G +  A +V N +  +G  P +V + SLIDG C  G 
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E+A  +   +  +G+     TY  L+ G  K+G   DG   + +M    V P+  TY+ 
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++    + G+ S   K+F EM     A ++ TY  L+ GLC+     EA  L  ++    
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              ++   N +I+        ++A  LF  + ++G  P+V TY V+I    K G+ + A 
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +   ME+ G  PS      +I   ++  D+ KA    S +  +  S +  T  +L+   
Sbjct: 776 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLF 835

Query: 466 CMKGNMKEASKLFNSMWE 483
             KG  +E  K   + ++
Sbjct: 836 SSKGKHREQIKFLPAKYQ 853


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 221/433 (51%), Gaps = 1/433 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++  + K      A+     M   GV     T+N L+  + +S    KG+L   + R
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR 290

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  +  ++  L+ G    G +  A ++LN++   G SPN V + +LIDG    G+ +
Sbjct: 291 KRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFK 350

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   GL+ T+ +Y VL+ GL KN        FY +M+ NGV     TY  +I
Sbjct: 351 EALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E   + +EM    +  ++VTY+ LI G C+  R++ A+ ++ ++   G+S
Sbjct: 411 DGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN I Y+ LI   C  G   +  R++  +   G +P   T+NVL+ +  KAG    A + 
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R M   GI P+ V++  LI+ +  S +  KAF ++  M K G  P  +TYG L+ GLC 
Sbjct: 531 MRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G++  A K   S+       + V+ N +I   CK GN  +A+ L GEM ++ ++P+  +
Sbjct: 591 GGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFT 650

Query: 528 YSSTIGVLCQDGK 540
           Y+S I  LC+ GK
Sbjct: 651 YTSLISGLCRKGK 663



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 263/556 (47%), Gaps = 55/556 (9%)

Query: 19  RMAKLPPLK---AFSLFNWASRQ-GLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLI-- 70
           R A+L P+    A     W  +Q GL   H  Q   I   +L+    +  +  A+ ++  
Sbjct: 41  RQARLRPVHGKLALKFLKWVVKQPGLDTDHIVQLFCITTHILVR---ARMYDPARHILKE 97

Query: 71  LKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           L ++SG+   SSF   +L+         +SNP     +++ +I  +L+  +   +L  F 
Sbjct: 98  LSLMSGK---SSFVFGALMATYRL---CNSNP----SVFDILIRVYLREGMIQDSLEIFR 147

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
            M   G  P   T N++L  ++KSC                ++ V+SF            
Sbjct: 148 LMGLYGFNPSVYTCNAILGSIVKSCE---------------DVSVWSF------------ 180

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
                  L ++ +    P+V  +  LI+  C  G  +++  L +K+ + G   T  TY  
Sbjct: 181 -------LKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNT 233

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++    K G  K   E  + M L GV+  + TYN LIH+ C   + ++G+ L  +MR R 
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRM 293

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  N VTYNTL+ G   E +V  A +LL++M   G+SPN +T+N LIDG    G   +A 
Sbjct: 294 IHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEAL 353

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++F+ +++ G   + V+Y VL+    K     +A      M+  G+    +TYT +ID  
Sbjct: 354 KMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++  +++A  M + M K G  PD+ TY  LI+G C  G +K A ++   ++   L PN 
Sbjct: 414 CKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNG 473

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           ++Y+ +I+  C+ G     +R+   M  +G  P+  +++  +  LC+ GK  EAE  +  
Sbjct: 474 IIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRC 533

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G+ P+   ++ L
Sbjct: 534 MTSDGILPNAVSFDCL 549



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 186/391 (47%), Gaps = 1/391 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F  LI G    G+  +A ++ + +E  G     V Y  L+DG CKN + + A+  + ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+   + TYT +I GL KNG   +      +M  +G+ P + TY+ LI+ +C  G++
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
               ++   +    ++ N + Y+TLI   C+   ++E  R+ + M + G +P+  T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVL 514

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +   C AG+  +A      + S+G  P+ V+++ LI  +  +G    A  +  EM + G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGH 574

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+  TY  L+    +   +  A +    +Q    + D      LI  +C  GN+ +A  
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVS 634

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG-LVPNIASYSSTIGVL 535
           LF  M +  + P+   Y  +I G C++G +  A+    E   +G LVPN   Y+  +  +
Sbjct: 635 LFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGM 694

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + G+W        QM KLGL   V   N +
Sbjct: 695 FKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 212/461 (45%), Gaps = 4/461 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
            ++ +I+ +  S    +A   F +M   G  P   T+ SLL  + K         F  S  
Sbjct: 546  FDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +D      LI   C++G+L+KA  +  ++ +    P+   YTSLI G C+ G   
Sbjct: 606  NVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665

Query: 228  RAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             A +LF K  E    LV  +  YT  + G+FK G  K GF F ++M   G++  + T N 
Sbjct: 666  IA-ILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNA 724

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            +I  Y   GK+ +   L  EM ++    N+ TYN L+ G  K   V  +  L   M ++G
Sbjct: 725  MIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSG 784

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            I P+ +T   +I G C++   +   ++       G      T+N+LI      G    A 
Sbjct: 785  ILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAF 844

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            D+V  M   GI+  + T   ++    R+   +++  +   M K G SP+   Y  L++GL
Sbjct: 845  DMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGL 904

Query: 466  CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            C  G++K A  +   M   K+ P +V  + M+    K G +  A  LL  M +  LVP I
Sbjct: 905  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTI 964

Query: 526  ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AS+++ + + C++G   EA  L   M   GLK  +  YN+L
Sbjct: 965  ASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVL 1005



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 224/525 (42%), Gaps = 64/525 (12%)

Query: 26   LKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTP 85
            LKAFS+F+  ++ G  H P   +     LL  +    H  A    LK +           
Sbjct: 560  LKAFSVFDEMTKVG--HHPTFFT--YGSLLKGLCKGGHLIAAEKFLKSL----------- 604

Query: 86   RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                    Q  P++ + V    +  ++I A  KS   D+A+  F +M+   + P S T+ 
Sbjct: 605  --------QNVPAAVDTV----MCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYT 652

Query: 146  SLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
            SL+  + +        LF  E   +  L  +   +   + G  +AG     F    Q+++
Sbjct: 653  SLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDK 712

Query: 204  MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            +G + +VV   ++IDG  + G IE+   L  ++G         TY +L+ G  K      
Sbjct: 713  LGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVST 772

Query: 264  GFEFYEKMQLNGVSPS-----------------------------------LYTYNCLIH 288
             F  Y  M L+G+ P                                     +T+N LI 
Sbjct: 773  SFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLIS 832

Query: 289  EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            + C  G+++  F + + M    ++ +  T + ++  L +  R QE+  +L +M   GISP
Sbjct: 833  KCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISP 892

Query: 349  NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
                Y  L++G C  G+   AF +  ++ ++   P  V  + ++RA +K G +  AS L+
Sbjct: 893  ESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLL 952

Query: 409  REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            R M +  + P+  ++T L+  F ++ ++ +A E+  +M   G   D+ +Y VLI GLC K
Sbjct: 953  RSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1012

Query: 469  GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            G+M  A +LF  M       N   Y  ++ G   +G  +    ++
Sbjct: 1013 GDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDII 1057



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/673 (21%), Positives = 264/673 (39%), Gaps = 118/673 (17%)

Query: 4   SKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH 63
           ++  +G  L  ++  RM     +   +L N  S +G         +I R LL++M +   
Sbjct: 277 NRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGK-------VLIARQLLNEMLTFGL 329

Query: 64  AAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSD 123
           +        +I G I+  +F     + H+ +    +   +     Y  ++D   K+   D
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFHMME----AKGLIGTEVSYGVLLDGLCKNAEFD 385

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
            A  ++ +M  +GV     T+  ++  + K+   D+  +  +E ++  ++ D+ ++  LI
Sbjct: 386 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  G L  A E++ ++  +G SPN +IY++LI  CC+ G ++    ++  +   G  
Sbjct: 446 NGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNT 505

Query: 243 ATQHTYTVLICGLFKNG-----------LQKDG------------------------FEF 267
               T+ VL+  L K G           +  DG                        F  
Sbjct: 506 PDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565

Query: 268 YEKMQLNGVSPSLYTY-----------------------------------NCLIHEYCN 292
           +++M   G  P+ +TY                                   N LI   C 
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCK 625

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-ISPNVI 351
            G + +   LF EM  R +  +  TY +LI GLC++ +   A     + +  G + PN +
Sbjct: 626 SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKV 685

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y   +DG   AG+    F    Q+   G +  VVT N +I  +S+ G  +   DL+ EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM 745

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +   P+  TY IL+  + +   +  +F +Y  M  SG  PD  T   +I G+C    +
Sbjct: 746 GNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNML 805

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG---------------------NSYRAL 510
           +   K+  +     +E +   +NM+I   C  G                     N+  A+
Sbjct: 806 EIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAI 865

Query: 511 --------------RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
                          +L EM+++G+ P    Y   +  LC+ G    A V+  +M+   +
Sbjct: 866 VSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKI 925

Query: 557 KPSVSLYNILYRA 569
            P     + + RA
Sbjct: 926 CPPNVAESAMVRA 938



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 145/309 (46%), Gaps = 2/309 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y  ++  + K +    +   +  M+ SG+ P   T  S+++ + +S   + G        
Sbjct: 757  YNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFI 816

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C+ VE+D ++F +LI  CC  G++N AF+++N +  +G S +     +++    +N   +
Sbjct: 817  CRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQ 876

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             ++M+  ++ + G+      Y  L+ GL + G  K  F   E+M  + + P     + ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  GK  E   L   M   ++   + ++ TL+   CK   V EA  L   M   G+ 
Sbjct: 937  RALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLK 996

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             ++++YN LI G C  G+   AF LF ++K +G   +V TY  L+      G     +D+
Sbjct: 997  LDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDI 1056

Query: 408  V-REMEERG 415
            + +++  RG
Sbjct: 1057 ILKDLLARG 1065



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 2/191 (1%)

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           +PSV  +++LIR + + G  + + ++ R M   G  PS  T   ++ S V+S +    + 
Sbjct: 122 NPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               M K    PDV T+ +LI+ LC +G+ K++S L   M ++   P  V YN ++  YC
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K+G    A+ LL  MN KG+  ++ +Y+  I  LC+  +  +  +LL  M K  + P+  
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 562 LYNILYRAKNN 572
            YN L    +N
Sbjct: 300 TYNTLLNGFSN 310


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 236/481 (49%), Gaps = 29/481 (6%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP      +  I+ + +K +     +  F+Q+  +G++P      SL I +   C   + 
Sbjct: 66  NPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKP---NIVSLSILINCYCHLGQM 122

Query: 161 WLFFSENRCKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
              FS     +++    +  +   L+KG C    + +A    + +  +GF  N V Y +L
Sbjct: 123 RFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTL 182

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHT-YTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           I+G CK G+   A  + R+I E  LV+T    Y+ +I GL K+ L  D +E Y +M    
Sbjct: 183 INGLCKIGETRAALQMLRQI-EGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKR 241

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           +SP++ T N LI+ YC  G+  E F L  EM  + +  +V T+N L+  LCKE +++EA+
Sbjct: 242 ISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAK 301

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGET--------------------DKAFRLFNQ 375
             +  M   G+ P+V+TY+ L+DG+C   E                     DKA  LF +
Sbjct: 302 SGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYE 361

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           ++    +P  VTYN LI    K+G    A +LV EM + G     +TY  LID+  ++  
Sbjct: 362 MRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHH 421

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++KA  +   ++  G   D+YTY +LI GLC +G +K+A  +F  +           Y +
Sbjct: 422 VDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTI 481

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           MI G C EG    A  LL +M + G VP+  +  + I  L ++ K   AE LL +M+  G
Sbjct: 482 MINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541

Query: 556 L 556
           L
Sbjct: 542 L 542



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 210/423 (49%), Gaps = 29/423 (6%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFFSENRCKV--ELDVYSFG 179
           A   F ++L  G  P + T  +L    +K    +   K  L F ++   +    +  S+G
Sbjct: 125 AFSIFAKILKMGYHPNTITLTTL----VKGFCLNHKVKEALHFHDHVLALGFHFNQVSYG 180

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            LI G C+ G+   A ++L Q+E    S +VV+Y+++IDG CK+  +  A  L+ ++   
Sbjct: 181 TLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITK 240

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            +  T  T   LI G    G  K+ F    +M L  ++P +YT+N L+   C EGK+ E 
Sbjct: 241 RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEA 300

Query: 300 FKLFDEMRHREVACNVVTYNTL--------------------ICGLCKEMRVQEAERLLD 339
                 M    V  +VVTY++L                    I G CK   V +A  L  
Sbjct: 301 KSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFY 360

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M+   I+P+ +TYN LIDG C +G    A+ L ++++ +GQ   ++TYN LI A  K  
Sbjct: 361 EMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNH 420

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
           +   A  LV++++++GI     TY ILID   +   ++ A  ++  +   G++  V+TY 
Sbjct: 421 HVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYT 480

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++I+GLC++G + EA  L + M +    P+ V    +I    +   + RA +LL EM  +
Sbjct: 481 IMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540

Query: 520 GLV 522
           GL+
Sbjct: 541 GLL 543



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 203/413 (49%), Gaps = 22/413 (5%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V  FG ++    +         +  QLE  G  PN+V  + LI+  C  G +  A  +F 
Sbjct: 71  VIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFA 130

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI ++G      T T L+ G   N   K+   F++ +   G   +  +Y  LI+  C  G
Sbjct: 131 KILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIG 190

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +     ++  ++  + V+ +VV Y+T+I GLCK+  V +A  L  +M    ISP V+T N
Sbjct: 191 ETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLN 250

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G+C  G+  +AF L  ++     +P V T+N+L+ A  K G  K A   +  M + 
Sbjct: 251 SLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKE 310

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSL--------------------MQKSGFSPD 454
           G+ P  VTY+ L+D +   +++ KA  +YS+                    M+    +PD
Sbjct: 311 GVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPD 370

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSYRALRLL 513
             TY  LI GLC  G +  A +L + M ++  +P D++ YN +I   CK  +  +A+ L+
Sbjct: 371 TVTYNSLIDGLCKSGRISYAWELVDEMRDSG-QPADIITYNSLIDALCKNHHVDKAIALV 429

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++ ++G+  ++ +Y+  I  LC+ G+  +A+V+   +L  G   +V  Y I+
Sbjct: 430 KKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIM 482



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 127/264 (48%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F  M     A +V+ +  ++  L K         L  Q++  GI PN+++ + LI+ +C 
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+   AF +F ++   G  P+ +T   L++ F      K A      +   G   ++V+
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  LI+   +  +   A +M   ++    S DV  Y  +I GLC    + +A +L++ M 
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
             ++ P  V  N +I+GYC  G    A  LL EM  K + P++ +++  +  LC++GK  
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 298

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA+  +  M+K G+ P V  Y+ L
Sbjct: 299 EAKSGIAVMMKEGVMPDVVTYSSL 322



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+IDA  K+   D+A+    ++ D G++    T+N L+  + K        + F +  
Sbjct: 409 YNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLL 468

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   L V+++ I+I G C  G LN+A  +L+++E+ G  P+ V   ++I    +N   E
Sbjct: 469 IKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNE 528

Query: 228 RAKMLFRKIGELGLV 242
           RA+ L R++   GL+
Sbjct: 529 RAEKLLREMIARGLL 543


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 230/493 (46%), Gaps = 23/493 (4%)

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           HL+ L  +   P   S  Y S +  + ++ L   A   F  M   G    + T+ +LL  
Sbjct: 94  HLSSLLRAGFAP--DSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHG 151

Query: 151 VIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
           +  +    +    F+    + C  +  VY+   ++ G C AG   +A  +L+     GF 
Sbjct: 152 LCGAGMVREAMSVFAGMQADGCAPDPHVYA--TMVHGLCGAGRTREAETLLSDAMAEGFE 209

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNVV+Y +LIDG C  GD+E A  +F ++   G      TYT LI G  K+         
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           + +M   G+ P++ TY  LI   C++G++   ++L   M +  +  N  T + LI  LCK
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             RV EA+ LL  +   GI  N I Y  LIDG C AG    A RL   L S G  P   T
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y+ LI    +      A  ++ +M E+G+ PS VTYTI+ID  VR    + + ++   M 
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            +G  PDV+TY + +   C +G M++A  +   M +  + PN V YN +I GY   G + 
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK-----------WPEAEV-----LLNQM 551
           +A      M   G  PN  SY+  + +L +              W  AE+     LL +M
Sbjct: 510 QAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEM 569

Query: 552 LKLGLKPSVSLYN 564
           +KL L   + +YN
Sbjct: 570 VKLQLPSEIDIYN 582



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 182/358 (50%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N+  YT+LI+  C  GD+  +K     +   G     H YT  + G  + GL       +
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
             M L G   + +TY  L+H  C  G V E   +F  M+    A +   Y T++ GLC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R +EAE LL      G  PNV+ YN LIDG+C+ G+ + A  +F ++  NG SP+V TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             LI  F K+     A  L   M + G+ P+ VTYT LI        ++ A+ +   M+ 
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           SG  P+ +T  VLI  LC    + EA  L  S+ +  ++ N++VY  +I G CK G    
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A RL+  +  +G VP+  +YSS I  LC+  +  EA ++L+ M++ G++PS   Y I+
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTII 428



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 202/394 (51%), Gaps = 2/394 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C AGDL  +   L+ L   GF+P+   YTS + G C+ G +  A  LF  +
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G V T  TYT L+ GL   G+ ++    +  MQ +G +P  + Y  ++H  C  G+ 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  +        NVV YN LI G C    ++ A  + ++M + G SPNV TY +L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC + + D+A  LF+++   G  P+VVTY  LI+     G    A  L++ ME  G+
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 417 TPSEVTYTILIDSFVRSDDM-EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            P+E T ++LID+  + + + E    + SL+QK G   +   Y  LI GLC  G    A 
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQK-GIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +L  ++      P+   Y+ +I G C++     A+ +L +M EKG+ P+  +Y+  I  L
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++     ++ +L++M+  G+KP V  Y I  R+
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRS 466



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 216/475 (45%), Gaps = 19/475 (4%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           R Y  +I    KSR  D+A+  F +M+D+G+ P   T+ +L+         D  + L  S
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                +  + ++  +LI   C+   + +A  +L  L + G   N ++YTSLIDG CK G 
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  L + +   G V   HTY+ LI GL +     +     + M   GV PS  TY  
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I E   E       K+ D+M    +  +V TY   +   C E R+++AE ++  M   G
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS---- 401
           + PN++TYN LI G+ + G T +AF  F  + +NG  P+  +Y VL+R   K  +S    
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547

Query: 402 ------------KMASDLVREMEERGITPSEV-TYTILIDSFVRSDDMEKAFEMYSLMQK 448
                       K    L+ EM +  + PSE+  Y   + S  R D +++A  +   MQ 
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQL-PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQS 606

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           +  +P    Y  +I   C    + EA    +SM ++   P    Y  +I   C+EG+   
Sbjct: 607 ANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQT 666

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           A ++ G+M  K       ++   I  L Q G   E   LL+ M +   +PS +LY
Sbjct: 667 AKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 4/252 (1%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N  +  L +   + + E    +M     + N+ TY  LI+ +C AG+   + R  + L  
Sbjct: 45  NAFLMALARHRMLADMESFASRMP----ARNLRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P    Y   +  + +AG    A  L   M  RG   +  TYT L+     +  + +
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A  +++ MQ  G +PD + Y  ++HGLC  G  +EA  L +       EPN VVYN +I 
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC  G+   A+ +   M+  G  PN+ +Y+  I   C+  K   A +L ++M+  GL P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 559 SVSLYNILYRAK 570
           +V  Y  L + +
Sbjct: 281 NVVTYTALIQGQ 292



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 112/251 (44%)

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R  A N+ TY TLI   C    +  ++R L  +  AG +P+   Y   + G+C AG    
Sbjct: 66  RMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAH 125

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A RLF  +   G   +  TY  L+     AG  + A  +   M+  G  P    Y  ++ 
Sbjct: 126 ACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVH 185

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
               +    +A  + S     GF P+V  Y  LI G C  G+++ A  +F  M      P
Sbjct: 186 GLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSP 245

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N   Y  +I G+CK     RA+ L   M + GLVPN+ +Y++ I   C DG+   A  LL
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 549 NQMLKLGLKPS 559
             M   GL P+
Sbjct: 306 QSMENSGLVPN 316



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 150/353 (42%), Gaps = 17/353 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y S+ID   + +   +A+     M++ GV+P   T+  ++  +++    D    
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              +     ++ DV+++ I ++  C  G +  A  ++  + + G  PN+V Y +LI G  
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK----NGLQKDGFEFY--------- 268
             G   +A   F+ +   G    + +YTVL+  L K    N +  +    +         
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563

Query: 269 ---EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              E+M    +   +  YNC +   C   ++ E   L  EM+   +  +   Y ++I   
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACC 623

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C+   + EA   +D M  +G  P + +Y  +I   C+ G    A ++F  + S   +   
Sbjct: 624 CRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEE 683

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           + + +LI    + G     S L+  MEE+   PS+  Y  L      ++D+++
Sbjct: 684 IAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%)

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT LI+++  + D+  +    S + ++GF+PD + Y   + G C  G +  A +LF  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                      Y  ++ G C  G    A+ +   M   G  P+   Y++ +  LC  G+ 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            EAE LL+  +  G +P+V +YN L     N+
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNV 225



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/349 (20%), Positives = 143/349 (40%), Gaps = 40/349 (11%)

Query: 38  QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL---CHLTQ 94
           +G+Q +P + +II+  L+ ++ +     ++ ++ K+I+  I    FT    +   CH  +
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGAD---GSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472

Query: 95  LFPSS------------SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           +  +              N VT    Y ++I  +    L+ QA   F  M+ +G +P   
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVT----YNALICGYANLGLTSQAFSTFKHMVANGCKPNEE 528

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           ++  LL  +IK  S        S N     + ++             ++     +L ++ 
Sbjct: 529 SYTVLLRLLIKKES--------SNNIPANSVSIWKIA----------EMKYLHGLLEEMV 570

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           ++     + IY   +   C+   ++ AK+L  ++    L  ++  YT +I    +  +  
Sbjct: 571 KLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLT 630

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +   F + M  +G  P L +Y  +I   C EG +    ++F +M  +E     + +  LI
Sbjct: 631 EALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILI 690

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
            GL ++  V E   LL  M+     P+   Y +L     DA +  +  R
Sbjct: 691 DGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++ A  K+   D A   F +M + G  P + T+ +++  + K+   D         R
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL--AGR 239

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            K  + VY+   LI G C+ G +  A ++L ++ + G  PNVV Y+ +I+  C +G++E 
Sbjct: 240 FKPSVPVYN--ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  LF ++   G  A  HT+T LI G F  G   +  + ++ M  +G  P++  YN LIH
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C+ G + E  ++ D+M+      NV TY+ LI G  K   +  A    ++M   G  P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV+TY  ++D  C     D+A  L  ++   G +P+ +T+N  I+     G  + A  L+
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M+  G  P+  TY  L+D+  R +  E+AF ++  ++     P++ TY  +++G    
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE-KGLVPNIAS 527
           G M EA +LF         P+ + YN MI  YCK+G    A +L+  ++  K   P+I +
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           Y+S I   C      EA   L++ +  G+ P+ + +N L R
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 225/463 (48%), Gaps = 6/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
           L+  II+ + +   ++QAL  F+++ + G +P    +N LL  ++    F     L+ + 
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  +V+++ IL+K  C+   ++ A ++  ++   G  P+ V YT+++   CK G I
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ L  +        +   Y  LI G+ K G  +   +   +M  NGV P++ +Y+C+
Sbjct: 231 DDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C  G V   F LF +M  R    N+ T+  LI G     ++ EA  L   M   G 
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+ YN LI G C  G  ++A ++ +Q++ +G  P+V TY++LI  F+K+G+   AS+
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
               M   G  P+ VTYT ++D   ++   ++A  +   M   G +P+  T+   I GLC
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++ A KL   M      PN   YN ++    +      A  L  E+  + L PN+ 
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ +    + G   EA  L  + L  G  P    YN +  A
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 190/373 (50%), Gaps = 5/373 (1%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           +L Q++  G +    ++  +I+G  + G  E+A  +F +IGE G   T   Y  L+  L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                +     Y  M+ +G+ P+++TYN L+   C   +V    KLF EM ++    + V
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY T++  LCK  ++ +A  L  + K     P+V  YN LIDG C  G  + A +L  ++
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             NG  P+VV+Y+ +I +   +GN ++A  L  +M  RG   +  T+T LI        +
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +A +++ LM + G  P+V  Y  LIHGLC  G+++EA ++ + M  +   PN   Y+++
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+ K G+   A      M   G  PN+ +Y+  + VLC++  + +A  L+ +M   G 
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450

Query: 557 KPSVSLYNILYRA 569
            P+   +N   + 
Sbjct: 451 TPNTMTFNTFIKG 463



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 210/415 (50%), Gaps = 2/415 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID   K    + A+    +M+D+GV P   +++ ++  +  S + +  +  F++ 
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +  + ++++F  LIKGC   G L +A ++   + + G  PNVV Y +LI G C NG +
Sbjct: 306 FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSL 365

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  +  ++   G +    TY++LI G  K+G      E + +M  +G  P++ TY C+
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C      +   L ++M       N +T+NT I GLC   RV+ A +LL++M+  G 
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN+ TYN+L+D      + ++AF LF ++++    P++VTYN ++  FS+AG    A  
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGL 465
           L  +   RG  P  +TY  +I ++ +   ++ A ++   +     + PD+ TY  LI G 
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGA 605

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           C   N++EA    +      + PN   +N ++  +         + +L ++  KG
Sbjct: 606 CNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 5/362 (1%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
            F      Y  +I+   +  +++  + + +++   G+   +  +  +I G  + G  +  
Sbjct: 69  AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + ++   G  P++  YN L+    +E K      L+  M+   +  NV TYN L+  
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK  RV  A +L  +M   G  P+ +TY  ++   C AG+ D A  L  + K     PS
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PS 243

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V  YN LI    K G  ++A  L+ EM + G+ P+ V+Y+ +I+S   S ++E AF +++
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G   +++T+  LI G  M+G + EA  L+  M +   EPN V YN +I G C  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL++  +M   G +PN+ +YS  I    + G    A    N+M+  G +P+V  Y 
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 565 IL 566
            +
Sbjct: 424 CM 425



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 5/253 (1%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY  +I  L +E  +   + +L QMKM GI+     +  +I+G+   G  ++A ++F ++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G  P+V  YN L+ A       +M + L   M++ G+ P+  TY IL+ +  ++D +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A +++  M   G  PD  TY  ++  LC  G + +A +L       + +P+  VYN +
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNAL 250

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G CKEG    A++LLGEM + G+ PN+ SYS  I  LC  G    A  L  QM   G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 557 KPSVSLYNILYRA 569
             ++  +  L + 
Sbjct: 311 DANIHTFTPLIKG 323



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 5/293 (1%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           N    +  TY  +I     E ++     +  +M+   + C    +  +I G  +    ++
Sbjct: 68  NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A ++  ++   G  P V  YN L+D      +      L+  +K +G  P+V TYN+L++
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  K      A  L  EM  +G  P  VTYT ++ S  ++  ++ A E+        F P
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKP 242

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            V  Y  LI G+C +G ++ A KL   M +  ++PN V Y+ +I   C  GN   A  L 
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +M  +G   NI +++  I      GK  EA  L   M++ G +P+V  YN L
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 5/189 (2%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           SN    +  TY V+I    +     M   ++++M+  GI   E  +  +I+ + R    E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A +M+  + + G  P V  Y  L+  L  +   +  + L+ +M +  L PN   YN+++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              CK      A +L  EM+ KG  P+  +Y++ +  LC+ GK  +A  L  +      K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FK 241

Query: 558 PSVSLYNIL 566
           PSV +YN L
Sbjct: 242 PSVPVYNAL 250



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 57/126 (45%)

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           ++   + F     TY V+I  L  +  M     +   M    +   + ++  +I GY + 
Sbjct: 63  AIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRV 122

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G++ +AL++   + E G  P +  Y+  +  L  + K+     L   M K GL P+V  Y
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 564 NILYRA 569
           NIL +A
Sbjct: 183 NILLKA 188


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 193/389 (49%), Gaps = 1/389 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  D  SF  L+ GCC  G   +A  +L  +   GF  +    T ++   C+ G      
Sbjct: 177 VRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVT 236

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LFR++ E+G       Y+  I GL + G  K  F   E+M   G+ P++YT+  LI   
Sbjct: 237 DLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 291 CNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           C  G +   F+LF ++ +      NV TY  +I G CKE ++  AE LL +M   G++PN
Sbjct: 297 CKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             TY  LI G C  G  D+AF L N++K  G  P++ TYN +I  F K G  + A  ++R
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
               +G+   +VTYTILI    +   +  A +++  M +    PD++TY  +I   C + 
Sbjct: 417 MATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQR 476

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M+++ +LF+      L P    Y  MI GYC+ G    AL++   M + G +P+  +Y 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYG 536

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           + I  LC++ +  EA  L   ML   L P
Sbjct: 537 ALISSLCKESRLEEARALFETMLDKHLVP 565



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 172/347 (49%), Gaps = 1/347 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++ ++   I G CE G + +AF VL ++   G  PNV  +TSLIDG CK G +ERA  LF
Sbjct: 250 NMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLF 309

Query: 234 RK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            K +         HTYTV+I G  K G          +M   G++P+  TY  LIH +C 
Sbjct: 310 LKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCK 369

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G     F+L ++M+      N+ TYN +I G CK+ ++QEA ++L      G+  + +T
Sbjct: 370 GGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVT 429

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI   C  G    A  LF Q+      P + TY  +I  + +    + +  L  +  
Sbjct: 430 YTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCL 489

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G+ P++ TYT +I  + R   +  A +++  M + G  PD  TYG LI  LC +  ++
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLE 549

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           EA  LF +M +  L P DV    + + YC+      A+  L  ++++
Sbjct: 550 EARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKR 596



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 191/384 (49%), Gaps = 8/384 (2%)

Query: 187 EAGDLNKAFEVLNQLEEMGF-----SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           EAG L +A ++L +L   G      + N V+   L    C     E    + R  G  G+
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAG--GV 177

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                ++  L+ G  + G  ++       M   G      T   ++  +C +G+      
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF  M       N+V Y+  I GLC+   V++A  +L++M   G+ PNV T+  LIDG C
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 362 DAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             G  ++AFRLF +L KS+   P+V TY V+I  + K G    A  L+  M E+G+ P+ 
Sbjct: 298 KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TYT LI    +    ++AFE+ + M+  GF P++YTY  +I G C KG ++EA K+   
Sbjct: 358 NTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRM 417

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                L  + V Y ++I  +CK+G+   AL L  +M EK   P+I +Y++ I + CQ  +
Sbjct: 418 ATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQ 477

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYN 564
             +++ L ++ L +GL P+   Y 
Sbjct: 478 MEQSQQLFDKCLSIGLVPTKQTYT 501



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 10/348 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I  + K     +A     +M++ G+ P +NT+ +L+    K  SFD+ +     N+
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELM--NK 382

Query: 169 CKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            K+E    ++Y++  +I G C+ G + +A++VL      G   + V YT LI   CK G 
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGH 442

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I  A  LF+++ E       HTYT +I    +    +   + ++K    G+ P+  TY  
Sbjct: 443 ITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I  YC  GK++   K+F+ M       + +TY  LI  LCKE R++EA  L + M    
Sbjct: 503 MIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKH 562

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P  +T   L   +C   +   A    ++L    Q+    T + L+R  S  GN   AS
Sbjct: 563 LVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAH---TADALVRKLSTVGNLDAAS 619

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--SGF 451
             ++ + ++       TYT  I+S   S+    A E+   + K  SGF
Sbjct: 620 LFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKRISGF 667


>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
 gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
          Length = 866

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 208/405 (51%), Gaps = 6/405 (1%)

Query: 168 RC----KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCK 222
           RC    K +L +  F ++ K   + GD  ++  +   ++ ++   PN  IYT +I    +
Sbjct: 96  RCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGR 155

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E+   +F ++G  G+  +  +YT LI    +NG  +   E  E+M+   VSPS+ T
Sbjct: 156 EGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILT 215

Query: 283 YNCLIHEYCNEGKVSEGF-KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           YN +I+     G   EG   LF EMRH  +  ++VTYNTL+C         EAE +   M
Sbjct: 216 YNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTM 275

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ P++ TY  L+D F      DK   L  ++ S G  P + +YNVL+ A+++ GN 
Sbjct: 276 NEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNI 335

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A+ + R M+E G  P+  TY+IL+  + +    ++  E++  M+ S   PD  TY  L
Sbjct: 336 EDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTL 395

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I      G  KE   LF+ M E  +EPN   Y  +IF   K G    A ++L  M+EKG+
Sbjct: 396 IDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGM 455

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +P+  +Y+  I    Q   + EA V LN M ++G KP++  YN L
Sbjct: 456 IPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTL 500



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 212/468 (45%), Gaps = 11/468 (2%)

Query: 109 YESIIDAHLKSRLSDQALF-YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SE 166
           Y ++I++  +  L  + L   F +M   G++P   T+N+LL         D+  + F + 
Sbjct: 216 YNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTM 275

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   V  D+ ++  L+    +   L+K  E+L ++   G  P +  Y  L++   + G+I
Sbjct: 276 NEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNI 335

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  +FR + E G V    TY++L+    K+G   +  E + +M+++   P   TYN L
Sbjct: 336 EDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTL 395

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +   G   E   LF +M    V  N+ TY  LI    K     +A+++L  M   G+
Sbjct: 396 IDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGM 455

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  +I+ +  A   ++A    N +   G  P++ TYN LI  F++ G  K    
Sbjct: 456 IPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEA 515

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ +M + G+     ++  +I+ F +    E+A + Y  M+KS   PD  T   ++   C
Sbjct: 516 ILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYC 575

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + G + E+ + F  +  + + PN + Y MM+  Y K      A  LL EM    L    +
Sbjct: 576 IAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM----LTNRAS 631

Query: 527 SYSSTIGVLCQ-----DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +    IG + +     D  W   E + +++   G    +  YN L  A
Sbjct: 632 NIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEA 679



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 6/323 (1%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD- 158
           SN    +  Y ++ID   +     + +  FH M +  V P   T+  L+    K    D 
Sbjct: 383 SNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDD 442

Query: 159 --KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
             K  L  SE         Y+   +I+   +A    +A   LN + EMG  P +  Y +L
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTG--VIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTL 500

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I    + G  +  + +  K+G+ G+   + ++  +I G  + G  ++  + Y +M+ + +
Sbjct: 501 IYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRL 560

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P   T   ++  YC  G V E  + F E++   +  NV+ Y  ++    K  R  EA  
Sbjct: 561 VPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYE 620

Query: 337 LLDQMKMAGISPNVITYNKLIDG-FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           LLD+M     S       ++I G F D         +F++L S G    +  YN L+ A 
Sbjct: 621 LLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEAL 680

Query: 396 SKAGNSKMASDLVREMEERGITP 418
              G  + A  ++ E  +RG  P
Sbjct: 681 WWLGQKERAVRVLGEATKRGHFP 703


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 232/505 (45%), Gaps = 42/505 (8%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           PSS        ++ +I+    ++R+  Q +     +   G  P    FNS+L  ++K   
Sbjct: 2   PSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE-D 60

Query: 157 FDKGWLFFSENRC--KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            D    F+ +      V  D Y+FGIL+KG C    +  AF++L  ++  G +PN VIY 
Sbjct: 61  IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYN 120

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           ++I   CKNG + RA+ L  ++ E     +  T+ VLI    +           EK    
Sbjct: 121 TMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSM 176

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P + T   ++   C  G+V+EG ++ + +       +VV YNTLI G C   + +  
Sbjct: 177 GFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVG 236

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            R+L  M++ G  PNV TYN L  G+CD+G  D A  LFN +K++G + + +TY+ LIR 
Sbjct: 237 HRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRG 296

Query: 395 FSKAGNSKMASDLVREMEE-RG----------------------------------ITPS 419
               G  +    ++  MEE RG                                  + P 
Sbjct: 297 LCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPR 356

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V  ++ I  F     +  A  +Y  M K G  P V  Y  LIHG C  GN++EA +L N
Sbjct: 357 AVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELIN 416

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    P    +N +I  +C +G    AL+L+ +M  +G +P++ SYS  +  LC  G
Sbjct: 417 EMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKG 476

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYN 564
            + +A  L  QM++  + P  S +N
Sbjct: 477 DFQKAVRLFLQMVEKDILPDYSTWN 501



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 8/435 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVY 176
           L +R+ D A      M   G  P +  +N+++  + K+    +     +E    VE    
Sbjct: 93  LTNRIGD-AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNE---MVEPSDV 148

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F +LI   C+  +L +A  +L +   MGF P+VV  T ++   CK G +     +  ++
Sbjct: 149 TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV 208

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             +G V     Y  LI G    G  K G    + M++ G  P++ TYN L   YC+ G +
Sbjct: 209 ESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGML 268

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK--MAGISPNVITYN 354
                LF++M+   +  N +TY+TLI GLC   R+++  ++L+ M+    G    +  YN
Sbjct: 269 DSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYN 328

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +I G     + ++A     +++     P  V  ++ I  F   G+   A  +  +M + 
Sbjct: 329 SIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKE 386

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  PS + Y  LI  F +  ++ +AFE+ + M   G+ P   T+  LI   C +G +  A
Sbjct: 387 GGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSA 446

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            KL   M      P+   Y+ M+   C +G+  +A+RL  +M EK ++P+ ++++S +  
Sbjct: 447 LKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLC 506

Query: 535 LCQDGKWPEAEVLLN 549
           L Q+  W E + L +
Sbjct: 507 LTQETVWLEGDNLFH 521



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 60/133 (45%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C+ G++ +AFE++N++ + G+ P    + +LI   C  G +  A  L   +   G
Sbjct: 398 LIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRG 457

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
            +    +Y+ ++  L   G  +     + +M    + P   T+N ++     E    EG 
Sbjct: 458 CLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGD 517

Query: 301 KLFDEMRHREVAC 313
            LF    +RE  C
Sbjct: 518 NLFHLTAYRERLC 530


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 243/527 (46%), Gaps = 71/527 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L+ + I+A  K    ++A+  F +M ++GV P   TFN+++  +     +D+ ++F  + 
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID-------- 218
             + +E  + ++ IL+KG   A  +  A+ VL ++ + GF PNV++Y +LID        
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381

Query: 219 ---------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                      G CKNG  + A+ L +++  +G    Q ++T +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441

Query: 252 IC-----------------------------------GLFKNGLQKDGFEFYEKMQLNGV 276
           IC                                   GL K+G      E + +    G 
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                T N L+H  C  GK+ E F++  E+  R    + V+YNTLI G C + ++ EA  
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            LD+M   G+ P+  TY+ LI G  +  + ++A + ++  K NG  P V TY+V+I    
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KA  ++   +   EM  + + P+ V Y  LI ++ RS  +  A E+   M+  G SP+  
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI G+ +   ++EA  LF  M    LEPN   Y  +I GY K G   +   LL EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + K + PN  +Y+  IG   +DG   EA  LLN+M + G+ P    Y
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 220/471 (46%), Gaps = 43/471 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFF 164
           Y  ++    +++    A F   +M   G  P    +N+L+   I++ S +K      L  
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF------------------ 206
           S+    + L   ++  LIKG C+ G  + A  +L ++  +GF                  
Sbjct: 393 SKG---LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449

Query: 207 -----------------SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
                            SP   + T+LI G CK+G   +A  L+ +    G V    T  
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ GL + G   + F   +++   G      +YN LI   C + K+ E F   DEM  R
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +  TY+ LICGL    +V+EA +  D  K  G+ P+V TY+ +IDG C A  T++ 
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
              F+++ S    P+ V YN LIRA+ ++G   MA +L  +M+ +GI+P+  TYT LI  
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                 +E+A  ++  M+  G  P+V+ Y  LI G    G M +   L   M    + PN
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDG 539
            + Y +MI GY ++GN   A RLL EM EKG+VP+  +Y   I G L Q G
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 274/624 (43%), Gaps = 82/624 (13%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTP-QSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
           +K+ P  A   F  AS         +S  +++ LLL    ++  +AA+ +++++I+G + 
Sbjct: 102 SKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLD---ANLLSAARVVLIRLINGNVP 158

Query: 80  SSSFTPRSLLCHLTQLFPSSS---NPVTKSRLYESIIDAHLKSRLSDQ---ALFYFHQML 133
                 R     +     S S   +   + ++ + +I+ +      D    AL  F  + 
Sbjct: 159 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 218

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
           + G+ P   T N LL  ++++  F K    F +  CK V  DVY F   I   C+ G + 
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 277

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A ++ +++EE G +PNVV + ++IDG    G  + A M   K+ E G+  T  TY++L+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL +     D +   ++M   G  P++  YN LI  +   G +++  ++ D M  + ++
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--------------------------- 345
               TYNTLI G CK  +   AERLL +M   G                           
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457

Query: 346 --------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
                   +SP       LI G C  G+  KA  L+ Q  + G      T N L+    +
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517

Query: 398 AGNSKMASDLVRE-----------------------------------MEERGITPSEVT 422
           AG    A  + +E                                   M +RG+ P   T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ILI      + +E+A + +   +++G  PDVYTY V+I G C     +E  + F+ M 
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++PN VVYN +I  YC+ G    AL L  +M  KG+ PN A+Y+S I  +    +  
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA++L  +M   GL+P+V  Y  L
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTAL 721



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 180/355 (50%), Gaps = 1/355 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D AL +  +ML   + P      +L+  + K     K   L+F        +D  +   L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G CEAG L++AF +  ++   G   + V Y +LI GCC    ++ A M   ++ + GL
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +TY++LICGLF     ++  +F++  + NG+ P +YTY+ +I   C   +  EG +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            FDEM  + V  N V YN LI   C+  R+  A  L + MK  GISPN  TY  LI G  
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                ++A  LF +++  G  P+V  Y  LI  + K G       L+REM  + + P+++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TYT++I  + R  ++ +A  + + M++ G  PD  TY   I+G   +G + EA K
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 191/422 (45%), Gaps = 9/422 (2%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y ++I  + K+  +D A     +ML  G      +F S++  +     FD    F  
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459

Query: 166 ENRCKVELDVYSFG-----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           E    + L   S G      LI G C+ G  +KA E+  Q    GF  +     +L+ G 
Sbjct: 460 E----MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ G ++ A  + ++I   G V  + +Y  LI G        + F F ++M   G+ P  
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY+ LI    N  KV E  + +D+ +   +  +V TY+ +I G CK  R +E +   D+
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M    + PN + YN LI  +C +G    A  L   +K  G SP+  TY  LI+  S    
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L  EM   G+ P+   YT LID + +   M K   +   M      P+  TY V
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G    GN+ EAS+L N M E  + P+ + Y   I+GY K+G    A +   E N   
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 815

Query: 521 LV 522
           ++
Sbjct: 816 II 817



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 37/224 (16%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N    + +Y  +I A+ +S     AL     M   G+ P S T+ S            
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS------------ 685

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                                 LIKG      + +A  +  ++   G  PNV  YT+LID
Sbjct: 686 ----------------------LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G  K G + + + L R++    +   + TYTV+I G  ++G   +      +M+  G+ P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              TY   I+ Y  +G V E FK  DE  +   A  +  +N LI
Sbjct: 784 DSITYKEFIYGYLKQGGVLEAFKGSDEENY---AAIIEGWNKLI 824


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 243/527 (46%), Gaps = 71/527 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L+ + I+A  K    ++A+  F +M ++GV P   TFN+++  +     +D+ ++F  + 
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID-------- 218
             + +E  + ++ IL+KG   A  +  A+ VL ++ + GF PNV++Y +LID        
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 370

Query: 219 ---------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                      G CKNG  + A+ L +++  +G    Q ++T +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 430

Query: 252 IC-----------------------------------GLFKNGLQKDGFEFYEKMQLNGV 276
           IC                                   GL K+G      E + +    G 
Sbjct: 431 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 490

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                T N L+H  C  GK+ E F++  E+  R    + V+YNTLI G C + ++ EA  
Sbjct: 491 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 550

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            LD+M   G+ P+  TY+ LI G  +  + ++A + ++  K NG  P V TY+V+I    
Sbjct: 551 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 610

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KA  ++   +   EM  + + P+ V Y  LI ++ RS  +  A E+   M+  G SP+  
Sbjct: 611 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI G+ +   ++EA  LF  M    LEPN   Y  +I GY K G   +   LL EM
Sbjct: 671 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 730

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + K + PN  +Y+  IG   +DG   EA  LLN+M + G+ P    Y
Sbjct: 731 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 220/471 (46%), Gaps = 43/471 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFF 164
           Y  ++    +++    A F   +M   G  P    +N+L+   I++ S +K      L  
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 381

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF------------------ 206
           S+    + L   ++  LIKG C+ G  + A  +L ++  +GF                  
Sbjct: 382 SKG---LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 438

Query: 207 -----------------SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
                            SP   + T+LI G CK+G   +A  L+ +    G V    T  
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ GL + G   + F   +++   G      +YN LI   C + K+ E F   DEM  R
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  +  TY+ LICGL    +V+EA +  D  K  G+ P+V TY+ +IDG C A  T++ 
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 618

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
              F+++ S    P+ V YN LIRA+ ++G   MA +L  +M+ +GI+P+  TYT LI  
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
                 +E+A  ++  M+  G  P+V+ Y  LI G    G M +   L   M    + PN
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDG 539
            + Y +MI GY ++GN   A RLL EM EKG+VP+  +Y   I G L Q G
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 789



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 274/624 (43%), Gaps = 82/624 (13%)

Query: 21  AKLPPLKAFSLFNWASRQGLQHTP-QSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
           +K+ P  A   F  AS         +S  +++ LLL    ++  +AA+ +++++I+G + 
Sbjct: 91  SKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLD---ANLLSAARVVLIRLINGNVP 147

Query: 80  SSSFTPRSLLCHLTQLFPSSS---NPVTKSRLYESIIDAHLKSRLSDQ---ALFYFHQML 133
                 R     +     S S   +   + ++ + +I+ +      D    AL  F  + 
Sbjct: 148 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 207

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
           + G+ P   T N LL  ++++  F K    F +  CK V  DVY F   I   C+ G + 
Sbjct: 208 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 266

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A ++ +++EE G +PNVV + ++IDG    G  + A M   K+ E G+  T  TY++L+
Sbjct: 267 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 326

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL +     D +   ++M   G  P++  YN LI  +   G +++  ++ D M  + ++
Sbjct: 327 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 386

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--------------------------- 345
               TYNTLI G CK  +   AERLL +M   G                           
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 446

Query: 346 --------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
                   +SP       LI G C  G+  KA  L+ Q  + G      T N L+    +
Sbjct: 447 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 506

Query: 398 AGNSKMASDLVRE-----------------------------------MEERGITPSEVT 422
           AG    A  + +E                                   M +RG+ P   T
Sbjct: 507 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 566

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ILI      + +E+A + +   +++G  PDVYTY V+I G C     +E  + F+ M 
Sbjct: 567 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 626

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++PN VVYN +I  YC+ G    AL L  +M  KG+ PN A+Y+S I  +    +  
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA++L  +M   GL+P+V  Y  L
Sbjct: 687 EAKLLFEEMRMEGLEPNVFHYTAL 710



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 180/355 (50%), Gaps = 1/355 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
           D AL +  +ML   + P      +L+  + K     K   L+F        +D  +   L
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G CEAG L++AF +  ++   G   + V Y +LI GCC    ++ A M   ++ + GL
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
               +TY++LICGLF     ++  +F++  + NG+ P +YTY+ +I   C   +  EG +
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            FDEM  + V  N V YN LI   C+  R+  A  L + MK  GISPN  TY  LI G  
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                ++A  LF +++  G  P+V  Y  LI  + K G       L+REM  + + P+++
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 740

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TYT++I  + R  ++ +A  + + M++ G  PD  TY   I+G   +G + EA K
Sbjct: 741 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 191/422 (45%), Gaps = 9/422 (2%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y ++I  + K+  +D A     +ML  G      +F S++  +     FD    F  
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448

Query: 166 ENRCKVELDVYSFG-----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           E    + L   S G      LI G C+ G  +KA E+  Q    GF  +     +L+ G 
Sbjct: 449 E----MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ G ++ A  + ++I   G V  + +Y  LI G        + F F ++M   G+ P  
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 564

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY+ LI    N  KV E  + +D+ +   +  +V TY+ +I G CK  R +E +   D+
Sbjct: 565 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 624

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M    + PN + YN LI  +C +G    A  L   +K  G SP+  TY  LI+  S    
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L  EM   G+ P+   YT LID + +   M K   +   M      P+  TY V
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G    GN+ EAS+L N M E  + P+ + Y   I+GY K+G    A +   E N   
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 804

Query: 521 LV 522
           ++
Sbjct: 805 II 806



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 37/224 (16%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N    + +Y  +I A+ +S     AL     M   G+ P S T+ S            
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS------------ 674

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                                 LIKG      + +A  +  ++   G  PNV  YT+LID
Sbjct: 675 ----------------------LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 712

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G  K G + + + L R++    +   + TYTV+I G  ++G   +      +M+  G+ P
Sbjct: 713 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 772

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              TY   I+ Y  +G V E FK  DE  +   A  +  +N LI
Sbjct: 773 DSITYKEFIYGYLKQGGVLEAFKGSDEENY---AAIIEGWNKLI 813


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 198/386 (51%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           VE D Y++  LI+G C  G  + A  VL  +   G  P+VV YT L++  CK    ++A 
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++ + G      TY V++ G+ + G  +D  EF + +   G  P+  +YN ++   
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
               +  +  KL +EM H+    NVVT+N LI  LC+   V+ A  +L+QM   G +PN 
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L+  FC   +  KA      + S G  P +V+YN L+ A  + G   +A +L+ +
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++G +P  ++Y  +ID   ++   ++A E+   M   G  PD+ TY  +  GLC +  
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++EA + F  + +  + P   +YN ++ G CK   ++ A+ L   M   G +PN ++Y+ 
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGL 556
            +  L  +G   EA  L  Q+   G+
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 197/386 (51%), Gaps = 8/386 (2%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LIK  C +G    A  VL         P+V++Y +++ G C  G ++ A+   R + ++ 
Sbjct: 110 LIKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAAR---RLVADMP 161

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    +TY  LI GL   G   +     E M   G  P + TY  L+   C      +  
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           KL DEM  +  A ++VTYN ++ G+C+E RV++A   L  +   G  PN ++YN ++ G 
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             A   + A +L  ++   G  P+VVT+N+LI    + G  + A +++ +M + G TP+ 
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           ++Y  L+ +F +   + KA E   LM   G  PD+ +Y  L+  LC  G +  A +L + 
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + +    P  + YN +I G  K G +  AL LL EM  KGL P+I +YS+    LC++ +
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EA     ++  +G++P+ +LYN +
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAI 487



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 13/395 (3%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           Y +  L  G+  R  T N+L +       F +G L           DV ++ IL++  C+
Sbjct: 167 YTYNTLIRGLCGRGRTSNALAVL---EDMFRRGCLP----------DVVTYTILLEATCK 213

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
                +A ++L+++ + G +P++V Y  +++G C+ G +E A    + +   G      +
Sbjct: 214 RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVS 273

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y +++ GLF     +D  +  E+M   G  P++ T+N LI   C  G V    ++ ++M 
Sbjct: 274 YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP 333

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 N ++YN L+   CK+ ++ +A   ++ M   G  P++++YN L+   C  GE D
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  L +QLK  G SP +++YN +I   +KAG +K A +L+ EM  +G+ P  +TY+ + 
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R D +E+A   +  +Q  G  P    Y  ++ GLC +     A  LF  M  +   
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           PN+  Y +++ G   EG    A  L  ++  +G+V
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV  +  ++ G C AG L+ A  ++    +M   P+   Y +LI G C  G    A  + 
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLV---ADMPVEPDAYTYNTLIRGLCGRGRTSNALAVL 189

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G +    TYT+L+    K    K   +  ++M   G +P + TYN +++  C E
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+V +  +    +       N V+YN ++ GL    R ++AE+L+++M   G  PNV+T+
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  + A  +  Q+   G +P+ ++YN L+ AF K      A + V  M  
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  P  V+Y  L+ +  R+ +++ A E+   ++  G SP + +Y  +I GL   G  KE
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L + M    L+P+ + Y+ +  G C+E     A+R   ++ + G+ P  A Y++ + 
Sbjct: 430 ALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILL 489

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +   A  L   M+  G  P+ S Y IL
Sbjct: 490 GLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 41/430 (9%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R L++ M     A     +++ + GR  +S+      L  L  +F     P   +  Y  
Sbjct: 154 RRLVADMPVEPDAYTYNTLIRGLCGRGRTSNA-----LAVLEDMFRRGCLPDVVT--YTI 206

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +++A  K     QA+    +M D G  P                                
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAP-------------------------------- 234

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D+ ++ +++ G C+ G +  A E L  L   G  PN V Y  ++ G       E A+ 
Sbjct: 235 --DIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEK 292

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++   G      T+ +LI  L + GL +   E  E+M   G +P+  +YN L+H +C
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            + K+ +  +  + M  R    ++V+YNTL+  LC+   V  A  LL Q+K  G SP +I
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI 412

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +IDG   AG+T +A  L +++ S G  P ++TY+ +     +    + A     ++
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           ++ GI P+   Y  ++    +  +   A ++++ M  SG  P+  TY +L+ GL  +G +
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLV 532

Query: 472 KEASKLFNSM 481
           KEA +LF  +
Sbjct: 533 KEARELFAQL 542



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 10/317 (3%)

Query: 255 LFKNGLQKDGFEFYEKMQ-LNGVSPS-LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           L + G   D     + +  LN  SP+ +     LI + C  G+ ++  ++          
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AASG 131

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+ YN ++ G C   ++  A RL+  M    + P+  TYN LI G C  G T  A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              +   G  P VVTY +L+ A  K    K A  L+ EM ++G  P  VTY ++++   +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +E A E    +   G  P+  +Y +++ GL      ++A KL   M      PN V 
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +NM+I   C+ G    A+ +L +M + G  PN  SY+  +   C+  K  +A   +  M+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 553 KLGLKPSVSLYNILYRA 569
             G  P +  YN L  A
Sbjct: 369 SRGCYPDIVSYNTLLTA 385



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 34/203 (16%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++ A  ++   D A+   HQ+ D G  P       +LI                   
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSP-------VLI------------------- 412

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                   S+  +I G  +AG   +A E+L+++   G  P+++ Y+++  G C+   IE 
Sbjct: 413 --------SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A   F K+ ++G+  T   Y  ++ GL K     +  + +  M  +G  P+  TY  L+ 
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVE 524

Query: 289 EYCNEGKVSEGFKLFDEMRHREV 311
               EG V E  +LF ++  R V
Sbjct: 525 GLAYEGLVKEARELFAQLCSRGV 547


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 204/385 (52%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
            LD  S+G LI G C+ G+   A E+L +++      +VV+Y+++ID  CK+ ++  A  
Sbjct: 172 HLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFD 231

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+ ++    + +   TY+ LI G    G  KD    + KM    ++P +YT+N L+  +C
Sbjct: 232 LYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 291

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EG+V E       M  + +  ++VTYN+L+ G C    V  A+ +L+ M   G++  V 
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +YN +I+GFC     D+A +LF ++      P+V+TYN LI    K+G    A +L+  M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +RG  P  +TY+ ++D+  ++  ++KA  +   ++  G  P++YTY +LI GLC  G +
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           ++A  +F  +           Y +MI G+C  G    AL LL +M +   +P+  +Y   
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  L    +  +AE LL +M+  GL
Sbjct: 532 ICSLFDKDENDKAEKLLREMITRGL 556



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 235/496 (47%), Gaps = 13/496 (2%)

Query: 79  TSSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
           TS++F   + +     LF      NP      +  I+ + +KS+     L  F +M   G
Sbjct: 41  TSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRG 100

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSFGILIKGCCEAGD 190
           ++P    FN L+     +C    G + F+ +      +   E D  +    IKG C  G 
Sbjct: 101 IKPNFVNFNILI-----NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +++A    ++L  +GF  + V Y +LI+G CK G+   A  L R++    +      Y+ 
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  + K+    D F+ Y +M    +S ++ TY+ LI  +C  GK+ +   LF++M    
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +V T+N L+   CKE RV+EA+  L  M   GI P+++TYN L+DG+C   E + A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            + N +   G + +V +YN++I  F K      A  L +EM  + I P+ +TY  LID  
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +S  +  A E+  LM   G  PD+ TY  ++  LC    + +A  L   + +  + PN 
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             Y ++I G CK G    A  +  ++  KG    + +Y+  I   C  G + EA  LL++
Sbjct: 456 YTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515

Query: 551 MLKLGLKPSVSLYNIL 566
           M      P    Y I+
Sbjct: 516 MKDNSCIPDAITYEII 531



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 185/360 (51%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+LDV  +  +I   C+  ++N AF++ +++     S N+V Y++LI G C  G ++ A 
Sbjct: 206 VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI 265

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF K+    +    +T+ +L+    K G  K+       M   G+ P + TYN L+  Y
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY 325

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +V+    + + M HR V   V +YN +I G CK   V +A +L  +M    I PNV
Sbjct: 326 CLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ITYN LIDG C +G    A  L + +   GQ P ++TY+ ++ A  K      A  L+ +
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           ++++GI P+  TYTILID   +   +E A  ++  +   G++  V TY V+I G C  G 
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             EA  L + M +    P+ + Y ++I     +  + +A +LL EM  +GL+ +   Y S
Sbjct: 506 FDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 208/467 (44%), Gaps = 46/467 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y +IID+  K +  + A   + +M+   +     T+++L+  F I     D   LF   
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  DVY+F IL+   C+ G + +A   L  + + G  P++V Y SL+DG C   ++
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             AK +   +   G+ AT  +Y ++I G  K  +     + +++M    + P++ TYN L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++S   +L D M  R    +++TY++++  LCK   V +A  LL ++K  GI
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN+ TY  LIDG C  G  + A  +F  L   G + +V TY V+I+ F   G    A  
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG------- 459
           L+ +M++    P  +TY I+I S    D+ +KA ++   M   G       YG       
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFM 571

Query: 460 ------------------------------VLIHGLCMKGNMKEASKLFNSM-------W 482
                                         +    +  K NM++      S+       W
Sbjct: 572 AAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDW 631

Query: 483 ETKLEPNDV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             +    DV  Y +MI G+C  G    +L LL +M   G +P+  +Y
Sbjct: 632 SKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 179/398 (44%), Gaps = 13/398 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           +  ++DA  K     +A      M+  G++P   T+NSL+    ++   +  K  L    
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R  V   V S+ I+I G C+   +++A ++  ++      PNV+ Y SLIDG CK+G I
Sbjct: 343 HR-GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L   + + G      TY+ ++  L KN L         K++  G+ P++YTY  L
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G++ +   +F+++  +     V TY  +I G C      EA  LL +MK    
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ ITY  +I    D  E DKA +L  ++ + G   S + Y     +F  A    + +D
Sbjct: 522 IPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNND 581

Query: 407 LVR--EMEERGITPSEVTYTILIDSFVRSDDM-EKAFEMYSLM-------QKSGFSPDVY 456
            ++    +E G     +   I  D  +   +M +K  E  S++        K G+  DV 
Sbjct: 582 SLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVN 641

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           TY V+I G C  G   E+  L + M      P+ V Y+
Sbjct: 642 TYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 231/468 (49%), Gaps = 7/468 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFF 164
           Y  +ID  LK +    A+  + ++L DS V P   T N ++  + K    D   K W   
Sbjct: 222 YNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRM 281

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            +N  + E D+Y++  LI G C+ G+++KA  V N+L E     +VV Y +++ G C+ G
Sbjct: 282 KQN--EREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCG 339

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ +  L+R + +   V    +Y +LI GL +NG   +    +  M   G +    TY 
Sbjct: 340 KIKESLELWRIMEQRNSVNIV-SYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYG 398

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             IH  C  G V++   +  E+  +    +V  Y ++I  LCK+ R++EA  L+ +M   
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKH 458

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+  N    N LI G         A  L   +  NG  P+VV+YN+LI    +AG    A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEA 518

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           S  V+EM E G+ P   TY+IL+    R   +E A E++    +SG  PDV  + +LIHG
Sbjct: 519 SAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHG 578

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC  G + +A  +  +M       N V YN ++ GY K  +S RA  + G M + GL P+
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPD 638

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           I SY++ +  LC   +   A    +     G+ P+V  +NIL RA  N
Sbjct: 639 IISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 273/563 (48%), Gaps = 31/563 (5%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTL-----------IL 71
           P  AF+LF+ A+R  G  H+      ILR L  ++M +H     + +            L
Sbjct: 23  PRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVAL 82

Query: 72  KIISGRITSSSFTPRSL--LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYF 129
            +I      +S   R+L     + ++F       + + L  + ++A  K  +  ++LF +
Sbjct: 83  SVIK-TYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEA--KQWVKVESLFAY 139

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-----WLFFSENRCKVELDVYSFGILIKG 184
            +   +GV P   T+N L+    K   F+K      W++    +   + DV+S+  +I  
Sbjct: 140 FET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMW----KEGFKPDVFSYSTVIND 193

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV-A 243
             + G L+ A E+ +++ E   +P+V  Y  LIDG  K  D + A  L+ K+ E   V  
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+ ++I GL K G   D  + +++M+ N     LYTY+ LIH  C+EG V +   +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +E+  R+   +VVTYNT++ G C+  +++E+  L   M+    S N+++YN LI G  + 
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLEN 372

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D+A  ++  + + G +    TY + I      G    A  +++E+E +G       Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAY 432

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +ID   +   +E+A  +   M K G   + +    LI GL     + +AS L   M +
Sbjct: 433 ASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGK 492

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
               P  V YN++I G C+ G    A   + EM E GL P++ +YS  +G LC+D K   
Sbjct: 493 NGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIEL 552

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A  L +Q L+ GL+P V ++NIL
Sbjct: 553 ALELWHQFLQSGLEPDVMMHNIL 575



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 240/561 (42%), Gaps = 103/561 (18%)

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
           S +P+    H+ +L  S  NP     L++S   A      +  A+ Y H +L      R 
Sbjct: 7   SLSPK----HVLKLLKSEKNPRAAFALFDS---ATRHPGYAHSAVVY-HHILRRLSEARM 58

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
            T    ++ +I+S              CK + DV    I   G     D  +A +V  ++
Sbjct: 59  VTHVGRIVELIRS------------QECKCDEDVALSVIKTYGKNSMPD--RALDVFKRM 104

Query: 202 EEM-GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
            E+ G  P +  Y +L++   +     + + LF      G+     TY VLI    K   
Sbjct: 105 REIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI----KMSC 160

Query: 261 QKDGFE----FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +K  FE    F   M   G  P +++Y+ +I++    GK+ +  +LFDEM  R VA +V 
Sbjct: 161 KKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVT 220

Query: 317 TYNTLICGLCKEM------------------------------------RVQEAERLLDQ 340
            YN LI G  KE                                     RV +  ++ D+
Sbjct: 221 CYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDR 280

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           MK      ++ TY+ LI G CD G  DKA  +FN+L        VVTYN ++  F + G 
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK 340

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            K + +L R ME+R  + + V+Y ILI   + +  +++A  ++ LM   G++ D  TYG+
Sbjct: 341 IKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGI 399

Query: 461 LIHGLCMKG-----------------------------------NMKEASKLFNSMWETK 485
            IHGLC+ G                                    ++EAS L   M +  
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHG 459

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +E N  V N +I G  ++     A  L+  M + G +P + SY+  I  LC+ GK+ EA 
Sbjct: 460 VELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEAS 519

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
             + +ML+ GLKP +  Y+IL
Sbjct: 520 AFVKEMLENGLKPDLKTYSIL 540



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 34/186 (18%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           + Y  ++    + R  + AL  +HQ L SG+ P                           
Sbjct: 535 KTYSILLGGLCRDRKIELALELWHQFLQSGLEP--------------------------- 567

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                  DV    ILI G C  G L+ A  V+  +E    + N+V Y +L++G  K  D 
Sbjct: 568 -------DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDS 620

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA +++  + ++GL     +Y  ++ GL          EF++  + +G+ P++YT+N L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNIL 680

Query: 287 IHEYCN 292
           +    N
Sbjct: 681 VRAVVN 686


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 241/486 (49%), Gaps = 5/486 (1%)

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIID----AHLKSRLSDQALFYFHQMLDSGVRPRS 141
           ++L C ++       N   + +  E + D     ++ + + ++    F  M+ +G++   
Sbjct: 121 KNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDD 180

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            +    L+ + +S        FF +    KV++ VYS  I+I G C+ G + +A +++ +
Sbjct: 181 RSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLE 240

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           +   G  PNVV Y +L++   K  D E    + R +    +V    TYT+LI     +G 
Sbjct: 241 MTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGK 300

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             +  + +EKM   GV   ++ +  +I   C  G +   F LFDE+  R +  N  TY  
Sbjct: 301 IAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGA 360

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI G C   ++  AE L+++M+  G+  N++ +N LI+G+C  G  D+A R+ + ++  G
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG 420

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
               + TYN +     K    + A   +  M E+G+ P+ V++TI+ID   +  ++ +A 
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            ++  M+K G  P+V TY  LI G   KG +KEA +L + M    +  +   Y  ++ G 
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C  G    AL LL E+  KGL  +I +Y++ I  L ++G+  EA  L ++M+  GL P  
Sbjct: 541 CVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDD 600

Query: 561 SLYNIL 566
            +Y  L
Sbjct: 601 RVYTSL 606



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 206/389 (52%), Gaps = 5/389 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRC 169
           +ID   K    ++A     +M   G++P   T+N+L+   IK   F+     L   E   
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMD- 279

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV  +  ++ +LI+    +G + +A +V  ++ E G   ++ ++TS+I   CK G+++RA
Sbjct: 280 KVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRA 339

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-FYEKMQLNGVSPSLYTYNCLIH 288
             LF ++ E GLVA  HTY  LI G   +G Q D  E    +MQ  G+  +L  +N LI+
Sbjct: 340 FALFDELNERGLVANAHTYGALIHGTCNSG-QLDAAEMLVNEMQSQGLDMNLVIFNTLIN 398

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC +G + E  ++ D M  +    ++ TYNT+  GLCK  R +EA+R L  M   G+ P
Sbjct: 399 GYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDP 458

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N +++  +ID  C  G   +A R+F  +K  G+ P+VVTYN LI  +SK G  K A  L 
Sbjct: 459 NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EME  G+T    TYT L+        +E+A  + + + + G +  + TY  +I GL  +
Sbjct: 519 DEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKE 578

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           G  +EA +L++ M    L P+D VY  ++
Sbjct: 579 GRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 148/306 (48%), Gaps = 36/306 (11%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F +ML+ GV    + F S++ +  K  +  + +  F E N   +  + +++G LI G C 
Sbjct: 308 FEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCN 367

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           +G L+ A  ++N+++  G   N+VI+ +LI+G CK G I+ A  +   + + G      T
Sbjct: 368 SGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFT 427

Query: 248 YTVLICGLFK----------------NGLQKDGFEF-------------------YEKMQ 272
           Y  +  GL K                 G+  +   F                   ++ M+
Sbjct: 428 YNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMK 487

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G  P++ TYN LI  Y  +GK+ E ++L DEM    +  ++ TY TL+ G C   +V+
Sbjct: 488 KKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVE 547

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA  LL+++   G++ +++TY  +I G    G +++AFRL++++ + G +P    Y  L+
Sbjct: 548 EALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607

Query: 393 RAFSKA 398
               K 
Sbjct: 608 ANLHKT 613


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 219/463 (47%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN--TFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+ LK    D+A     +M   G     N  TFN ++ F+ +    +        
Sbjct: 240 YNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDS 299

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI    E G + KA  +  ++E  G  P VV Y ++I G  K    
Sbjct: 300 MRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQA 359

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++ F ++  +GL+    TY  L+    K G  K+       ++  G++P++ TYN L
Sbjct: 360 EAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 419

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G ++E  +L +EM  +    +V TY  L+ G  K   +  A    D+M   G+
Sbjct: 420 IDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGL 479

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I        T  AF+L   +   G  P  VTYNV+I    K GN K A  
Sbjct: 480 QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKR 539

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+ P  +TYT LI +      + +A ++ + M   G  P V TY +L+H  C
Sbjct: 540 LKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCC 599

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M +  +EPN++ YN++I   C  G +  A R   EM E+GL PN  
Sbjct: 600 RRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKY 659

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C++G W +A  L  +M + G+ P    +N L++ 
Sbjct: 660 TYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 210/403 (52%), Gaps = 2/403 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A L+     +A     +M + G+ P   T+N+++  ++K    +   + F+E R
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               L DV ++  L+   C+AG+L +A  +L  L   G +P V+ Y +LIDG C+ GD+ 
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLA 430

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  ++ E G      TYT+L+ G  K        EF+++M   G+ P  + YN  I
Sbjct: 431 EARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                       F+L + M  + +  + VTYN +I GLCK   +++A+RL  +M   G+ 
Sbjct: 491 CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQ 550

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY  LI   C+ G   +A +L N + S+G  PSVVTY +L+    + GN   A   
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGW 610

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R+M + GI P+E+TY +LI +   +     AF  +  M + G +P+ YTY +LI G C 
Sbjct: 611 FRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCR 670

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           +GN  +A +L+  M +  + P+   +N +  G+  EG+ Y A+
Sbjct: 671 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAI 712



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 4/437 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           GV P     N +L  +  +  +D     + E  + +VE  + ++  L+    + G  ++A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 195 FEVLNQLEEMG--FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
             +L ++E  G  FS N V +  +I    + G +E A  L   +  L   A+  TY  LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLI 315

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G  +       +M+  G+ P++ TYN +IH      +       F EMR   + 
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V+TYN+L+   CK   ++EA  LL  ++ AG++P V+TYN LIDG+C  G+  +A RL
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++   G  P V TY +L+    K  N  MA +   EM  +G+ P    Y   I + + 
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                 AF++  +M   G  PD  TY V+I GLC  GN+K+A +L   M    L+P+ + 
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  +I  +C+ G    A +LL  M   GL P++ +Y+  +   C+ G    A     +ML
Sbjct: 556 YTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKML 615

Query: 553 KLGLKPSVSLYNILYRA 569
            +G++P+   YN+L  A
Sbjct: 616 DVGIEPNEITYNVLIHA 632



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           VA +V   N ++  L    R  +   +  +M    + P ++TYN L+D F   G  D+A 
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 371 RLFNQLKSNGQSPSV--VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
            L  ++++ G   S+  VT+NV+I   ++ G+ + A  LV  M       S  TY  LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLIT 316

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL-FNSMWETKLE 487
           + +    + KA  +   M+  G  P V TY  +IHGL +K    EA+++ F  M    L 
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGL-LKCEQAEAAQVKFAEMRAMGLL 375

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + YN ++  YCK GN   AL LLG++   GL P + +Y++ I   C+ G   EA  L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNNI 573
             +M++ G  P V  Y IL      +
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKV 461


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 229/441 (51%), Gaps = 2/441 (0%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSF 178
           +L D    +FH M+     P    F+ LL  + K   +D   +L+       +  ++ + 
Sbjct: 61  KLDDSLDLFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
            IL+   C    L+ A   L ++ ++G  P++V + SL++G C+   +  A  +F ++  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           +G       Y  +I GL K+    +  +   +M+ +G+ P + TYN LI   C+ G+ S+
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             ++   M  RE+  +V T+N LI    KE RV EAE   ++M    + P+++TY+ LI 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G C     D+A  +F  + S G  P VVTY++LI  + K+   +    L  EM +RG+  
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + VTYTILI  + R+  +  A E++  M   G  P++ TY VL+HGLC  G +++A  + 
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  ++ + V YN++I G CK G    A  +   +N +GL+P+I +Y++ +  L + 
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479

Query: 539 GKWPEAEVLLNQMLKLGLKPS 559
           G   EA+ L  +M + G+ P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 224/440 (50%), Gaps = 8/440 (1%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
            L  H+ Q       P+     +  ++ A  K +  D  ++ + QM   G+ P +    +
Sbjct: 67  DLFFHMVQ-----CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCN 120

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKV--ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +L+     CS     L F     K+  E  + +FG L+ G C    +  A  + +Q+  M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G+ PNVVIY ++IDG CK+  ++ A  L  ++ + G+     TY  LI GL  +G   D 
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                 M    + P ++T+N LI     EG+VSE  + ++EM  R +  ++VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LC   R+ EAE +   M   G  P+V+TY+ LI+G+C + + +   +LF ++   G   +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            VTY +LI+ + +AG   +A ++ R M   G+ P+ +TY +L+     +  +EKA  + +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            MQK+G   D+ TY ++I G+C  G + +A  ++ S+    L P+   Y  M+ G  K+G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480

Query: 505 NSYRALRLLGEMNEKGLVPN 524
               A  L  +M E G++PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 179/362 (49%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P++  ++ L+    K    +    L+ ++  LG+     T  +L+    +         F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             KM   G  PS+ T+  L++ +C   +V +   +FD+M       NVV YNT+I GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             +V  A  LL++M+  GI P+V+TYN LI G C +G    A R+ + +      P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           +N LI A  K G    A +   EM  R + P  VTY++LI        +++A EM+  M 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G  PDV TY +LI+G C    ++   KLF  M +  +  N V Y ++I GYC+ G   
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A  +   M   G+ PNI +Y+  +  LC +GK  +A V+L  M K G+   +  YNI+ 
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 568 RA 569
           R 
Sbjct: 439 RG 440



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 189/367 (51%), Gaps = 1/367 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           AL +  +M+  G  P   TF SLL  F      +D  ++F        + +V  +  +I 
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C++  ++ A ++LN++E+ G  P+VV Y SLI G C +G    A  +   + +  +  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+  LI    K G   +  EFYE+M    + P + TY+ LI+  C   ++ E  ++F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M  +    +VVTY+ LI G CK  +V+   +L  +M   G+  N +TY  LI G+C A
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ + A  +F ++   G  P+++TYNVL+      G  + A  ++ +M++ G+    VTY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            I+I    ++ ++  A+++Y  +   G  PD++TY  ++ GL  KG  +EA  LF  M E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494

Query: 484 TKLEPND 490
             + PN+
Sbjct: 495 DGILPNE 501



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 129/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ +   LF  M       ++  ++ L+  + K  +      L +QM+M GI  N+ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L++ FC   +   A     ++   G  PS+VT+  L+  F +      A  +  +M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y  +ID   +S  ++ A ++ + M+K G  PDV TY  LI GLC  G   +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           +++ + M + ++ P+   +N +I    KEG    A     EM  + L P+I +YS  I  
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC   +  EAE +   M+  G  P V  Y+IL
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 117/238 (49%)

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           M++ ++  L   M      P++  +++L+       + D    L+ Q++  G   ++ T 
Sbjct: 60  MKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N+L+  F +     +A   + +M + G  PS VT+  L++ F R D +  A  M+  M  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G+ P+V  Y  +I GLC    +  A  L N M +  + P+ V YN +I G C  G    
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A R++  M ++ + P++ ++++ I    ++G+  EAE    +M++  L P +  Y++L
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D +  LF  +      PS+  ++ L+ A SK     +   L  +M+  GI  +  T  IL
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ++ F R   +  A      M K G  P + T+G L++G C    + +A  +F+ M     
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN V+YN +I G CK      AL LL  M + G+ P++ +Y+S I  LC  G+W +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           +++ M K  + P V  +N L  A
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDA 265


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 216/447 (48%), Gaps = 4/447 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRC 169
           ++ A ++ + + +A   F   L     P S T+++L+    K+  F + +    E   R 
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V  +   +  +IKG C+ G ++ A      ++    +P+V+ YT L+D  CK+  I  A
Sbjct: 64  IVPHNAV-YNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDA 121

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            ++   + E G      TY  LI G  K G   +    + +M  N  SP ++TYN LI  
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC + +  +G KL  EM       N +TYNTL+  L K  +  +A  L   M      P+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             T+N +ID FC  G+ D A+ LF  +   G  P + TYN++I    +A     A  L+ 
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M E G  P  VTY  ++    ++  +++A+E+Y +++  G+  DV T   LI GLC   
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + +A KL   M      P+ V Y ++I G+CK     ++L    EM +KG VP + +YS
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGL 556
             I  LC+  +  +  +LL  ML+ G+
Sbjct: 422 IVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 216/423 (51%), Gaps = 2/423 (0%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N LL   ++     + +  F  + C +   D  ++  LI G C+A D  +A+ +L+++E+
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+  +Y ++I G C NG ++ A + +R + +     +  TYT+L+  L K+    D
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                E M   G +P++ TYN LI+ +C  G + E   LF++M     + +V TYN LI 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G CK+ R Q+  +LL +M   G  PN ITYN L+D    +G+   AF L   +      P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S  T+N++I  F K G   +A +L + M +RG  P   TY I+I    R++ ++ A ++ 
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M ++G  PDV TY  ++ GLC    + EA +++  +       + V  + +I G CK 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                A +LL EM   G  P++ +Y+  I   C+  +  ++    ++ML  G  P+V  Y
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 564 NIL 566
           +I+
Sbjct: 421 SIV 423



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 198/413 (47%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K+R   QA     +M   G+ P +  +N+++  +  +   D   + + + +
Sbjct: 36  YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 95

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                 V ++ IL+   C++  ++ A  +L  + E G +PNVV Y +LI+G CK G+++ 
Sbjct: 96  RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 155

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A +LF ++ E        TY +LI G  K    +DG +  ++M   G  P+  TYN L+ 
Sbjct: 156 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 215

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                GK  + F L   M  R+   +  T+N +I   CK  ++  A  L   M   G  P
Sbjct: 216 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 275

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ TYN +I G C A   D A +L  ++   G  P VVTYN ++    KA     A ++ 
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             +   G     VT + LID   +S  ++ A ++   M+++G +PDV  Y +LIHG C  
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
             + ++   F+ M +    P  + Y+++I   CK         LL  M E+G+
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 202/393 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +  ++  +I G  + GD+NKA ++ N++ + G SP++  Y  +++  CK   +++A+ + 
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++ + G++    TY  LI G    G  K+     +KM   G+ P + T N L+   C  
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKH 334

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+ +   +FD M  +    ++ +Y  ++ G   +  + +   L + M   GI+P+   +
Sbjct: 335 GKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIF 394

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI  +   G  D+A  +FN+++  G  P VVTY+ +I A  + G    A +   +M +
Sbjct: 395 NVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMID 454

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ PS  TY  LI  F    D+ KA ++   M   G  PD+  +  +I+ LC  G + +
Sbjct: 455 QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMD 514

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F+      L PN +VYN ++ GYC  G    ALR+   M   G+ PN+  Y + + 
Sbjct: 515 AQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVN 574

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C+ G+  E   L  ++L  G+KPS +LYNI+
Sbjct: 575 GYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 228/459 (49%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K    ++A   F++M+  G+ P  +T+N ++  + K+ + DK      +  
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  D +++  LI G    G   +A  V  ++   G  P+VV   SL+   CK+G I+
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  +   G      +Y +++ G    G   D  E +  M  +G++P  + +N LI
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G +     +F+EMR + V  +VVTY+T+I  LC+  ++ +A    +QM   G++
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ TY+ LI GFC  G+  KA  L  Q+ + G  P +  +N +I    K G    A ++
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNI 518

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                  G+ P+ + Y  L+D +     ME A  ++ +M  +G  P+V  YG L++G C 
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E   LF  +    ++P+  +YN+++ G  + G +  A     EM E G+  +  +
Sbjct: 579 VGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYT 638

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  +G L ++    EA +L  ++  + +K  ++  NI+
Sbjct: 639 YSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIM 677



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y  +++A  K+R  D+A     QM+D GV P + T+NSL+                    
Sbjct: 254 YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMT 313

Query: 149 -------IFVIKS-----CSF----DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
                  +  + S     C      D   +F S      + D++S+ I++ G    G L 
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
              E+ N +   G +P+  I+  LI    K G ++RA ++F ++ E G+     TY+ +I
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVI 433

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D  E + +M   GV+PS+ TY+ LI  +C  G + +   L  +M ++ + 
Sbjct: 434 AALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMR 493

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++  +N +I  LCK  RV +A+ + D     G+ PNV+ YN L+DG+C  G+ + A R+
Sbjct: 494 PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRV 553

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ + S G  P+VV Y  L+  + K G       L RE+  +GI PS   Y I++    +
Sbjct: 554 FDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQ 613

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +     A   +  M +SG + D YTY +++ GL       EA  LF  +    ++ +   
Sbjct: 614 AGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITT 673

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N+MI G  +      A  L   ++  GLVP++ +YS  +  L ++G   EA+ + + M 
Sbjct: 674 LNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733

Query: 553 KLGL-KPSVSLYNILYR 568
             G  +P+  L N + R
Sbjct: 734 NAGCEQPNSQLLNHVVR 750



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 179/391 (45%), Gaps = 43/391 (10%)

Query: 221 CKNGDIERAKMLFRKI----GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           C++G    A  LF ++    G   L  T HTY +L+    +    K    F+ ++   G+
Sbjct: 81  CRDGP-ALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGL 139

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFK-LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                  + L+   C   + +E    L   M H     +V +Y  ++  LC + +  +A+
Sbjct: 140 GIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199

Query: 336 RLLDQMKMAGIS--PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            LL  M   G    PN + YN +IDGF   G+ +KA  LFN++   G SP + TYN ++ 
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  KA     A  ++R+M ++G+ P   TY  LI  +  +   ++A  +   M   G  P
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSM------------------WETK---------- 485
           DV T   L+  LC  G +K+A  +F+SM                  + TK          
Sbjct: 320 DVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF 379

Query: 486 -------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
                  + P+  ++N++I  Y K G   RA  +  EM E+G+ P++ +YS+ I  LC+ 
Sbjct: 380 NLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GK  +A    NQM+  G+ PS+S Y+ L + 
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQG 470



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 204/450 (45%), Gaps = 37/450 (8%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
           I S +I  + +  +  L  LT+LF    S      S ++  +I A+ K  + D+A   F+
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           +M + GV P                                  DV ++  +I   C  G 
Sbjct: 416 EMREQGVEP----------------------------------DVVTYSTVIAALCRIGK 441

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A E  NQ+ + G +P++  Y  LI G C +GD+ +AK L  ++   G+      +  
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNF 501

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L K G   D    ++     G+ P++  YN L+  YC  GK+    ++FD M    
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  NVV Y TL+ G CK  R+ E   L  ++   GI P+   YN ++ G   AG T  A 
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
             F+++  +G +    TY++++    K   S  A  L +E+    +     T  I+I   
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGM 681

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE-PN 489
            +   +E+A ++++ + +SG  P V TY +++  L  +G ++EA  +F+SM     E PN
Sbjct: 682 FQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPN 741

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
             + N ++    ++    RA   L +++E+
Sbjct: 742 SQLLNHVVRELLEKREIVRAGTYLSKIDER 771


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 173/598 (28%), Positives = 263/598 (43%), Gaps = 57/598 (9%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI 73
           L L+ R A  P + A  LF   S       P+S S + RL+        H AA  L L +
Sbjct: 11  LALLRRNAASPAV-ALRLFLHLSSAACPPPPRSTSFLARLV------AEHPAADAL-LPL 62

Query: 74  ISGRITSSSFTPRSLLCHLT---------------QLFPSSSNPVTKSRLYESIIDAHLK 118
           +   I S       LL  L+                L   +S P   + +Y  +I A L+
Sbjct: 63  LHRHILSFPDPSPHLLALLSCSDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAALR 122

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSF 178
               D     +  +L SG +P   T N LL  +  +   +     F     + E   +SF
Sbjct: 123 ESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNE---FSF 179

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           GIL +G C AG    A +VL+ +  M    N+V+  +++ G CK G +E A+ L  ++  
Sbjct: 180 GILARGYCRAGRSIDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRV 235

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVS-PSLYTYNCLIHEYCNEG 294
            GL     T+   I  L K G   D +  ++ MQ +   G+  P   T++ ++  +C+ G
Sbjct: 236 QGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAG 295

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            V E   L D MR       V +YN  + GL +  RV EA+ LL +M   GI PN  TYN
Sbjct: 296 FVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYN 355

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            ++ G C  G+   A R+ N ++S   SP VVTY  L+ A+   GN   A+ ++ EM ++
Sbjct: 356 IIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQK 415

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+  TY +L+ S  R+    +A  +   M + G+S D     ++I GLC    +  A
Sbjct: 416 GCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVA 475

Query: 475 SKLFNSMWE-----------------------TKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             + + MWE                        +  P+ + Y+++I   CKEG    A +
Sbjct: 476 MDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKK 535

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L EM  K + P+   Y + I   C+ GK   A  +L  M K G  PS   YN+L R 
Sbjct: 536 KLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG 593



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 219/471 (46%), Gaps = 28/471 (5%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +++    K  L ++A     +M   G+ P   TFN+ +  + K+      +  F + +  
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 171 VE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +      D  +F +++ G C+AG +++A  +++ +   GF   V  Y   + G  +NG 
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A+ L R++   G+    +TY +++ GL K G   D       ++   +SP + TY  
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H YC++G ++   ++ DEM  +  A N  TYN L+  L +  R  EAERLL++M   G
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS----------------------- 382
            S +    N +IDG C     D A  + + +   G                         
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCL 511

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  +TY++LI A  K G    A   + EM  + I+P  V Y   I  + +      A ++
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M+K G +P   TY +LI G   K   +E  KL + M E  + PN + YN +I  +C+
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQ 631

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           +G   +A+ LL EM +  LVPNI S+   I   C+   +P A+++ +  L+
Sbjct: 632 QGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALR 682



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 201/454 (44%), Gaps = 25/454 (5%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A      M   G   R  ++N  L  ++++    +      E   + ++ + Y++ I+
Sbjct: 298 DEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNII 357

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           + G C+ G    A  V N +     SP+VV YTSL+   C  G+I  A  +  ++ + G 
Sbjct: 358 VSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGC 417

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY VL+  L++ G   +     E+M   G S      N +I   C   ++     
Sbjct: 418 APNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMD 477

Query: 302 LFDEMRH-----------------------REVACNVVTYNTLICGLCKEMRVQEAERLL 338
           + D M                         +    + +TY+ LI  LCKE R  EA++ L
Sbjct: 478 IVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKL 537

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M +  ISP+ + Y+  I G+C  G+T  A ++   ++  G +PS  TYN+LIR F + 
Sbjct: 538 LEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
             S+    L+ EM+E+GI+P+ +TY  LI SF +   + KA  +   M ++   P++ ++
Sbjct: 598 HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSF 657

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LI   C   +   A  +F++   T  +  +V+Y +M       G    A  +L    E
Sbjct: 658 DLLIKAYCKITDFPSAQMVFDAALRTCGQ-KEVLYCLMCTELTTYGKWIEAKNILEMALE 716

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
             +      Y   I  LC+ G+   A  LL  ++
Sbjct: 717 MRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLI 750



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 37/278 (13%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++ ILI   C+ G  ++A + L ++     SP+ VIY + I G CK+G    A  + 
Sbjct: 513 DQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + + G   +  TY +LI G  +    ++  +   +M+  G+SP++ TYN LI  +C +
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQ 632

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLI------------------------------C 323
           G V++   L DEM   E+  N+ +++ LI                              C
Sbjct: 633 GMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYC 692

Query: 324 GLCKEMRVQ----EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +C E+       EA+ +L+      +S     Y ++I G C+ GE D A  L   L + 
Sbjct: 693 LMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAK 752

Query: 380 GQSPSVVTYNVLIRAFSKAGNSK---MASDLVREMEER 414
                   +  +I A    G  +   M S  + EM +R
Sbjct: 753 RHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADR 790


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 224/452 (49%), Gaps = 38/452 (8%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEA 188
             ++++GV+  S  F  L   + +   F +    F+    + V     ++ +++ G C A
Sbjct: 8   RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G  N+A E++ +L  + ++P + IY  +I G C+   +  A  +  K+ E  +V    TY
Sbjct: 68  GMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTY 126

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T+L+ GL ++   K   E +++M+ NG  P+  TY  LI      G++ E  ++  E R 
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            E+  +V+T  T++ GLCK  R+ +A + +++M+  G+ PN +TY+ L+ GF   GE D+
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246

Query: 369 AFRLFNQ------------------------------------LKSNGQSPSVVTYNVLI 392
             R F +                                    L+ +G  P VVTY++LI
Sbjct: 247 VIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F++AG    + +L+ +M   G+ P  VTY+ LI+   +    + AF +  LM+ +G  
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP 366

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY  ++ GLC  G M E  +++  M +++  P+ V Y++++ G  K G    A++L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKL 426

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              +      P+ A+YS  I  LC+ GK  EA
Sbjct: 427 FELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 217/441 (49%), Gaps = 14/441 (3%)

Query: 77  RITSSSFT-------PRSLLCHLTQLFP--SSSNPVTKSRLYESIIDAHLKSRLSDQALF 127
           ++ S +FT        RS    + +LF   +S   V     Y+ ++D    + +++QAL 
Sbjct: 16  KVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALE 75

Query: 128 YFHQMLDSGV-RPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGC 185
              ++  SGV  P    +N ++  + ++      +    +     +  +V+++ IL+ G 
Sbjct: 76  LVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGL 133

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C +     A EV  +++  G  PN + Y +LI    + G+I+ A  +  +   L L    
Sbjct: 134 CRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDV 193

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T T ++ GL K     D  +F E+M+  GV P+  TY+ L+H +   G++    + F+E
Sbjct: 194 ITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE 253

Query: 306 MRHREV-ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            + R+  +     Y   +  LCK   +  A + +++++ +G+ P+V+TY+ LI+ F  AG
Sbjct: 254 EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAG 313

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D +  L   ++ NG  P VVTY+ LI    K    + A  L+  ME  G  P+ VTY 
Sbjct: 314 QFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYN 373

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            ++D   +S  M++   +Y +M KS  SPDV TY ++++GL   G +  A KLF  +  +
Sbjct: 374 SVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSS 433

Query: 485 KLEPNDVVYNMMIFGYCKEGN 505
           +  P+   Y+M+I   C+ G 
Sbjct: 434 REGPDAAAYSMVITSLCRAGK 454



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 183/345 (53%), Gaps = 10/345 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   +S  +  A   F +M  +G +P   T+ +L+  + ++   D+      E R
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQR 185

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             ++  DV +   ++ G C+A  L+ A + + ++ +MG  PN V Y++L+ G  ++G+++
Sbjct: 186 SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELD 245

Query: 228 RAKMLF-----RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           R    F     RK G L   A    Y   +  L K G      +  E+++ +GV P + T
Sbjct: 246 RVIRFFEEEKARKGGSLEAAA----YPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ LI+ +   G+     +L ++MR   V  +VVTY+TLI  LCKE + Q+A RLL+ M+
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELME 361

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            AG  PNV+TYN ++DG C +G+ D+  R++  +  +  SP VVTY++++   SKAG   
Sbjct: 362 AAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLD 421

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            A  L   ++     P    Y+++I S  R+  +E+A  MY  M+
Sbjct: 422 SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 176/373 (47%), Gaps = 39/373 (10%)

Query: 229 AKMLFRKIGELG---------LVAT--------------------------QHTYTVLIC 253
           AK+L R + E G         L+AT                          + TY +++ 
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 254 GLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           GL   G+     E     +L+GV +P+L+ YN +I   C   +V + +K+ ++M    + 
Sbjct: 63  GLCGAGMANQALELVR--ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV TY  L+ GLC+  + + A  +  +MK  G  PN ITY  LI     AGE D+A R+
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             + +S      V+T   ++    KA     A   + EM + G+ P+EVTY+ L+  F +
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 433 SDDMEKAFEMYSLMQ-KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             ++++    +   + + G S +   Y   +  LC  G +  A K    + ++ + P+ V
Sbjct: 241 HGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVV 300

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+M+I  + + G    +L LL +M   G+ P++ +YS+ I VLC++ K+ +A  LL  M
Sbjct: 301 TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELM 360

Query: 552 LKLGLKPSVSLYN 564
              G  P+V  YN
Sbjct: 361 EAAGSPPNVVTYN 373



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 38/309 (12%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I+    K+   D AL +  +M   GVRP   T+++L+    +    D+   FF E + +
Sbjct: 198 TIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKAR 257

Query: 171 V--ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
               L+  ++   +   C+AG L++A + + +L + G  P+VV Y+ LI+   + G  + 
Sbjct: 258 KGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDA 317

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           +  L   +   G+     TY+ LI  L K    +D F   E M+  G  P++ TYN ++ 
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  GK+ E  ++++ M     + +VVTY+ ++ GL K   +  A +L + +K +   P
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437

Query: 349 NVITYN------------------------------------KLIDGFCDAGETDKAFRL 372
           +   Y+                                     L+   CDA  TD A R+
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRI 497

Query: 373 FNQLKSNGQ 381
                  G 
Sbjct: 498 VEVASERGH 506


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 284/626 (45%), Gaps = 110/626 (17%)

Query: 44  PQSISIILRLLLSKMSSHSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNP 102
           PQ I  + +LLLS+    +H +  +L+  +   G + ++    RSL       FP    P
Sbjct: 63  PQ-IDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSL----RDRFPHDPPP 117

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           ++    Y  +    LK    D  ++ +  M  + V+P++ TFN L+  + +    +    
Sbjct: 118 IS---FYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENARE 174

Query: 163 FF---SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            F   SE  CK   + +S GIL++G C AG  +   ++L+++   G  PN V Y ++I  
Sbjct: 175 VFDKMSEKGCKP--NEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GV 276
            C  G    A+ L  K+ E+GL     T+   I  L K+G   +    +  MQ++   G+
Sbjct: 233 LCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292

Query: 277 -SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE------------------------- 310
             P+  TYN ++  +C+EG   E   +FD M++ E                         
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 311 ---------VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
                    +  N+ +YN L+ GLCK     +A  +L  M+ +G++P+ +TY+ L+ G+C
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  +  ++   G  P++ T N+L+ +  K G +  A DL++ M ERG     V
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNV 472

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFS-----------------------PDVYTY 458
           T   +I+   ++ +++KA E+ S M   G +                       PD  TY
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG---NSYRALR---- 511
             +I GLC  G + EA K    M   KL P+ ++++  I+ YCK+G   +++R L+    
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592

Query: 512 ----------------------------LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
                                       L+ EM E+G+ PN+ +Y++ I  L + GK  +
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKD 652

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  LL++ML+ G+ P++  + IL  A
Sbjct: 653 ATCLLDEMLQKGISPNIYTFRILIGA 678



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 220/519 (42%), Gaps = 65/519 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI-KSCSFDKGWLFFSENRCK 170
           ++  + ++ L    +    +M  SG  P    +N+++  +  +  + +   L        
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGF-SPNVVIYTSLIDGCCKNGDI 226
           +  D+ +F   I   C++G + +A  +   +   EEMG   PN V Y  +++G C  G  
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313

Query: 227 ERAKMLFR-------------KIGELGLVATQ---------------------HTYTVLI 252
           E A+ +F               I  LGLV +                      ++Y +L+
Sbjct: 314 EEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G+  D       M+ +GV+P   TY+ L+H YC  GK+ E   +  EM      
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N+ T N L+  L KE R  EAE LL  M   G   + +T N +I+G C AG  DKA  +
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493

Query: 373 FN---------------------QLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +                      +++NG+   P  +TY  +I    K G    A   + 
Sbjct: 494 VSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLL 553

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  + ++P  + +   I ++ +   +  AF +   M+K G +  + TY  LI GL  + 
Sbjct: 554 EMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSEN 613

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + E   L + M E  + PN   YN +I    + G    A  LL EM +KG+ PNI ++ 
Sbjct: 614 QIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFR 673

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKL-GLKPSVSLYNILY 567
             IG   +   +  A+ L    L L G K   SLY+ ++
Sbjct: 674 ILIGAFFKACDFGAAQELFEIALSLCGHKE--SLYSFMF 710



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 224/495 (45%), Gaps = 65/495 (13%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           ++N  ++ +++S    +  L  +E   K ++ ++YS+ IL+ G C+ G  + A  +L  +
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            E G +P+ V Y++L+ G C+ G I  A  + R++ ++G     +T  +L+  L+K G  
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-------- 313
            +  +  + M   G      T N +I+  C  G + +  ++   M  R  A         
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 314 ---------------NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
                          + +TY T+I GLCK  RV EA++ L +M    +SP+ + ++  I 
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 359 GFCDAGETDKAFR-----------------------------------LFNQLKSNGQSP 383
            +C  G+   AFR                                   L +++K  G  P
Sbjct: 573 NYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFP 632

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +V TYN +I   S+ G  K A+ L+ EM ++GI+P+  T+ ILI +F ++ D   A E++
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692

Query: 444 SL-MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + +   G    +Y++  + + L   G   +A +LF +  +  L   + +Y  +I   CK
Sbjct: 693 EIALSLCGHKESLYSF--MFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           +G    A  +L +M +K    + AS+   I  L + G    A+    +M+++  +   + 
Sbjct: 751 DGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNE 810

Query: 563 Y---NILYRAKNNIE 574
           +   NI  R  NN E
Sbjct: 811 HENKNIRGRLNNNDE 825



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 188/411 (45%), Gaps = 25/411 (6%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M +SGV P + T+++LL  +  +    +  ++     +     ++Y+  IL+    + G 
Sbjct: 392 MRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGR 451

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-----KMLFRKIGELGLVATQ 245
            ++A ++L  + E G+  + V   ++I+G CK G++++A      M  R    LG +   
Sbjct: 452 ASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNS 511

Query: 246 H------------------TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                              TY  +I GL K G   +  +   +M    +SP    ++  I
Sbjct: 512 FIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC +GK+S  F++  EM  +    ++ TYN+LI GL  E ++ E   L+D+MK  GI 
Sbjct: 572 YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIF 631

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV TYN +I    + G+   A  L +++   G SP++ T+ +LI AF KA +   A +L
Sbjct: 632 PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQEL 691

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E+        E  Y+ + +  +   +  KA E++        +   + Y  LI  LC 
Sbjct: 692 F-EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            G + +AS + + M + +   +   +  +I    K G+ + A      M E
Sbjct: 751 DGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 206/421 (48%), Gaps = 19/421 (4%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           PRS TF+ L +      +   G L  +   C   +  ++  +++ G C++G ++ A  +L
Sbjct: 95  PRSLTFSLLSLRRAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLL 154

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           + +   G S N + Y SL+D   +  D  R + +   +   G+ AT  TYT+L+  L   
Sbjct: 155 DDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTA 214

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
                    + +M+ N V   +Y Y  +I+ YC  G +    K+ DE     V  N  TY
Sbjct: 215 RDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTY 274

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL------ 372
             LI G CK  +++ AE LL  M+  G+  N I +N +IDG+C  G  D A ++      
Sbjct: 275 GVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEK 334

Query: 373 ---------FNQLKSN----GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
                    +N L       G  P+ VTY  LI    K G+   A  L REM E+G TPS
Sbjct: 335 IGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPS 394

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +TY+++I  + +   + +A      M+K GF PDVYTY  L+HG C+ G +  A KLF 
Sbjct: 395 VLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFE 454

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +   EPN V Y  +I G  KEG S  A +L  +M + GL+P+ + YS+ +G L  D 
Sbjct: 455 EMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 514

Query: 540 K 540
           +
Sbjct: 515 R 515



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 19/267 (7%)

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           + ++ GLCK  RV +A RLLD M   G+S N + YN L+D +    +  +   +   +++
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G   +V TY +L+ + S A +      L  EM+   +      YT +I+++ R+ +M +
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++      +G  P+  TYGVLI G C  G M+ A  L   M    +  N +++N MI 
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314

Query: 499 GYCKEGNSYRALRLLGEMNE-------------------KGLVPNIASYSSTIGVLCQDG 539
           GYC++G    AL++   M +                    G+VPN  +Y++ I + C+DG
Sbjct: 315 GYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDG 374

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              EA  L  +M + G  PSV  Y+++
Sbjct: 375 DMVEARRLFREMAEKGATPSVLTYSVM 401



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%)

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +   V++ GLC  G + +A +L + M    +  N + YN ++  Y ++ +  R   +L  
Sbjct: 132 FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           M  +G+   + +Y+  +  L       + E L N+M    +   V LY  +  A
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 245


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 209/427 (48%), Gaps = 1/427 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + T N+L+  +       +   F  +   +   L   S+GILI G C+ G
Sbjct: 118 KILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG 177

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A  +L ++E     PNVVIY+ +ID  CK+  ++ A  L+ ++   G+     TY+
Sbjct: 178 ETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYS 237

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G    G      +   +M L  ++P +YTY  L+   C EGKV E   +   M   
Sbjct: 238 ILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKA 297

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  +VV Y+TL+ G C    V  A+R+   M   G++P+V  Y+ +I+G C     D+A
Sbjct: 298 CVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEA 357

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             LF ++      P  VTY  LI    K+G      DL  EM +RG  P  +TY  LID+
Sbjct: 358 LNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDA 417

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++  +++A  +++ M+     P+VYT+ +L+ GLC  G +K A + F  +       N
Sbjct: 418 LCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLN 477

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y +MI G CKEG    AL L   M + G + +  ++   I       +  +AE L+ 
Sbjct: 478 VRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVR 537

Query: 550 QMLKLGL 556
           +M+  GL
Sbjct: 538 EMIARGL 544



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 232/473 (49%), Gaps = 7/473 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           +P   +  +  I+ + +  +    A+  + QM  S V P   T N   I +   C F + 
Sbjct: 53  HPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN---IIINCFCHFGQV 109

Query: 161 WLFFSENRCKVEL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            L FS     ++L    +  +   L+KG C  G + +A    +++   GF  + + Y  L
Sbjct: 110 VLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGIL 169

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I+G CK G+   A  L R+I    +      Y+++I  L K+ L  + ++ Y +M   G+
Sbjct: 170 INGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGI 229

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           SP + TY+ L+  +C  G+++    L +EM    +  ++ TY  L+  LCKE +V+EAE 
Sbjct: 230 SPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAEN 289

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +L  M  A ++ +V+ Y+ L+DG+C   E + A R+F  +   G +P V  Y+++I    
Sbjct: 290 VLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLC 349

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K      A +L  E+ ++ + P  VTYT LID   +S  +   ++++  M   G  PDV 
Sbjct: 350 KIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVI 409

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI  LC  G++  A  LFN M +  + PN   + +++ G CK G    AL    ++
Sbjct: 410 TYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDL 469

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             KG   N+ +Y+  I  LC++G   EA  L ++M   G       + I+ RA
Sbjct: 470 LTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRA 522



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 130/264 (49%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F+ M H     +   +N ++  L    R   A  L  QM+++ + P+  T N +I+ FC 
Sbjct: 46  FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH 105

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+   AF   +++   G  P+ +T N L++     G  K A     ++  +G   S ++
Sbjct: 106 FGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGIS 165

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y ILI+   +  +   A  +   +++    P+V  Y ++I  LC    + EA  L+  M 
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              + P+ V Y++++ G+C  G   RA+ LL EM  + + P+I +Y+  +  LC++GK  
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EAE +L  M+K  +   V +Y+ L
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTL 309



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 94/201 (46%)

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A   FN +     +P    +N ++ +         A  L ++ME   + P   T  I
Sbjct: 39  ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I+ F     +  AF   S + K G+ P+  T   L+ GLC++G +KEA +  + +    
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              + + Y ++I G CK G +  A+RLL  +    + PN+  YS  I  LC+D    EA 
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L  +M+  G+ P V  Y+IL
Sbjct: 219 DLYTEMVGKGISPDVVTYSIL 239


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 223/452 (49%), Gaps = 38/452 (8%)

Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEA 188
             ++++G +  S  F  L   + +   F +    F+    + V     ++ +++ G C A
Sbjct: 8   RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G  N+A E++ +L  + ++P V IY  +I G C+   +  A  +  K+ E  +V    TY
Sbjct: 68  GMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTY 126

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T+L+ GL ++   K   E +++M+ NG  P+  TY  LI      G++ E  ++  E R 
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            E+  +V+T  T++ GLCK  R+ +A + +++M+  G+ PN +TY+ L+ GF   GE D+
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246

Query: 369 AFRLFNQ------------------------------------LKSNGQSPSVVTYNVLI 392
             R F +                                    L+ +G  P VVTY++LI
Sbjct: 247 VIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             F++AG    + +L+ +M   G+ P  VTY+ LI+   +    + AF +  LM+ +G  
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP 366

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V TY  ++ GLC  G M E  +++  M +++  P+ V Y++++ G  K G    A++L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKL 426

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              +      P+ A+YS  I  LC+ GK  EA
Sbjct: 427 FELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 217/442 (49%), Gaps = 14/442 (3%)

Query: 76  GRITSSSFT-------PRSLLCHLTQLFP--SSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
            ++ S +FT        RS    + +LF   +S   V     Y+ ++D    + +++QAL
Sbjct: 15  AKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQAL 74

Query: 127 FYFHQMLDSGV-RPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKG 184
               ++  SGV  P    +N ++  + ++      +    +     +  +V+++ IL+ G
Sbjct: 75  ELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNG 132

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C +     A EV  +++  G  PN + Y +LI    + G+I+ A  +  +   L L   
Sbjct: 133 LCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             T T ++ GL K     D  +F E+M+  GV P+  TY+ L+H +   G++    + F+
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 305 EMRHREV-ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           E + R+  +     Y   +  LCK   +  A + +++++ +G+ P+V+TY+ LI+ F  A
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D +  L   ++ NG  P VVTY+ LI    K    + A  L+  ME  G  P+ VTY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             ++D   +S  M++   +Y +M KS  SPDV TY ++++GL   G +  A KLF  +  
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 484 TKLEPNDVVYNMMIFGYCKEGN 505
           ++  P+   Y+M+I   C+ G 
Sbjct: 433 SREGPDAAAYSMVITSLCRAGK 454



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 183/345 (53%), Gaps = 10/345 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++   +S  +  A   F +M  +G +P   T+ +L+  + ++   D+      E R
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQR 185

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             ++  DV +   ++ G C+A  L+ A + + ++ +MG  PN V Y++L+ G  ++G+++
Sbjct: 186 SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELD 245

Query: 228 RAKMLF-----RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           R    F     RK G L   A    Y   +  L K G      +  E+++ +GV P + T
Sbjct: 246 RVIRFFEEEKARKGGSLEAAA----YPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ LI+ +   G+     +L ++MR   V  +VVTY+TLI  LCKE + Q+A RLL+ M+
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELME 361

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            AG  PNV+TYN ++DG C +G+ D+  R++  +  +  SP VVTY++++   SKAG   
Sbjct: 362 AAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLD 421

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            A  L   ++     P    Y+++I S  R+  +E+A  MY  M+
Sbjct: 422 SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 39/373 (10%)

Query: 229 AKMLFRKIGELG---------LVAT--------------------------QHTYTVLIC 253
           AK+L R + E G         L+AT                          + TY +++ 
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 254 GLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           GL   G+     E     +L+GV +P+++ YN +I   C   +V + +K+ ++M    + 
Sbjct: 63  GLCGAGMANQALELVR--ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV TY  L+ GLC+  + + A  +  +MK  G  PN ITY  LI     AGE D+A R+
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             + +S      V+T   ++    KA     A   + EM + G+ P+EVTY+ L+  F +
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 433 SDDMEKAFEMYSLMQ-KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
             ++++    +   + + G S +   Y   +  LC  G +  A K    + ++ + P+ V
Sbjct: 241 HGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVV 300

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+M+I  + + G    +L LL +M   G+ P++ +YS+ I VLC++ K+ +A  LL  M
Sbjct: 301 TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELM 360

Query: 552 LKLGLKPSVSLYN 564
              G  P+V  YN
Sbjct: 361 EAAGSPPNVVTYN 373



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 38/309 (12%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I+    K+   D AL +  +M   GVRP   T+++L+    +    D+   FF E + +
Sbjct: 198 TIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKAR 257

Query: 171 V--ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
               L+  ++   +   C+AG L++A + + +L + G  P+VV Y+ LI+   + G  + 
Sbjct: 258 KGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDA 317

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           +  L   +   G+     TY+ LI  L K    +D F   E M+  G  P++ TYN ++ 
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  GK+ E  ++++ M     + +VVTY+ ++ GL K   +  A +L + +K +   P
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437

Query: 349 NVITYN------------------------------------KLIDGFCDAGETDKAFRL 372
           +   Y+                                     L+   CDA  TD A R+
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRI 497

Query: 373 FNQLKSNGQ 381
               +  G 
Sbjct: 498 VEVARERGH 506


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 284/626 (45%), Gaps = 110/626 (17%)

Query: 44  PQSISIILRLLLSKMSSHSHAAAQTLILKIIS-GRITSSSFTPRSLLCHLTQLFPSSSNP 102
           PQ I  + +LLLS+    +H +  +L+  +   G + ++    RSL       FP    P
Sbjct: 63  PQ-IDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSL----RDRFPHDPPP 117

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           ++    Y  +    LK    D  ++ +  M  + V+P++ TFN L+  + +    +    
Sbjct: 118 IS---FYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENARE 174

Query: 163 FF---SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            F   SE  CK   + +S GIL++G C AG  +   ++L+++   G  PN V Y ++I  
Sbjct: 175 VFDKMSEKGCKP--NEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GV 276
            C  G    A+ L  K+ E+GL     T+   I  L K+G   +    +  MQ++   G+
Sbjct: 233 LCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292

Query: 277 -SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE------------------------- 310
             P+  TYN ++  +C+EG   E   +FD M++ E                         
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 311 ---------VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
                    +  N+ +YN L+ GLCK     +A  +L  M+ +G++P+ +TY+ L+ G+C
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  +  ++   G  P++ T N+L+ +  K G +  A DL++ M ERG     V
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNV 472

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFS-----------------------PDVYTY 458
           T   +I+   ++ +++KA E+ S M   G +                       PD  TY
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG---NSYRALR---- 511
             +I GLC  G + EA K    M   KL P+ ++++  I+ YCK+G   +++R L+    
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592

Query: 512 ----------------------------LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
                                       L+ EM E+G+ PN+ +Y++ I  L + GK  +
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKD 652

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  LL++ML+ G+ P++  + IL  A
Sbjct: 653 ATCLLDEMLQKGISPNIYTFRILIGA 678



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 220/519 (42%), Gaps = 65/519 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI-KSCSFDKGWLFFSENRCK 170
           ++  + ++ L    +    +M  SG  P    +N+++  +  +  + +   L        
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQL---EEMGF-SPNVVIYTSLIDGCCKNGDI 226
           +  D+ +F   I   C++G + +A  +   +   EEMG   PN V Y  +++G C  G  
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313

Query: 227 ERAKMLFR-------------KIGELGLVATQ---------------------HTYTVLI 252
           E A+ +F               I  LGLV +                      ++Y +L+
Sbjct: 314 EEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K G+  D       M+ +GV+P   TY+ L+H YC  GK+ E   +  EM      
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N+ T N L+  L KE R  EAE LL  M   G   + +T N +I+G C AG  DKA  +
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493

Query: 373 FN---------------------QLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +                      +++NG+   P  +TY  +I    K G    A   + 
Sbjct: 494 VSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLL 553

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  + ++P  + +   I ++ +   +  AF +   M+K G +  + TY  LI GL  + 
Sbjct: 554 EMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSEN 613

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + E   L + M E  + PN   YN +I    + G    A  LL EM +KG+ PNI ++ 
Sbjct: 614 QIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFR 673

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKL-GLKPSVSLYNILY 567
             IG   +   +  A+ L    L L G K   SLY+ ++
Sbjct: 674 ILIGAFFKACDFGAAQELFEIALSLCGHKE--SLYSFMF 710



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 224/495 (45%), Gaps = 65/495 (13%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           ++N  ++ +++S    +  L  +E   K ++ ++YS+ IL+ G C+ G  + A  +L  +
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            E G +P+ V Y++L+ G C+ G I  A  + R++ ++G     +T  +L+  L+K G  
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-------- 313
            +  +  + M   G      T N +I+  C  G + +  ++   M  R  A         
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 314 ---------------NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
                          + +TY T+I GLCK  RV EA++ L +M    +SP+ + ++  I 
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 359 GFCDAGETDKAFR-----------------------------------LFNQLKSNGQSP 383
            +C  G+   AFR                                   L +++K  G  P
Sbjct: 573 NYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFP 632

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +V TYN +I   S+ G  K A+ L+ EM ++GI+P+  T+ ILI +F ++ D   A E++
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692

Query: 444 SL-MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + +   G    +Y++  + + L   G   +A +LF +  +  L   + +Y  +I   CK
Sbjct: 693 EIALSLCGHKESLYSF--MFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
           +G    A  +L +M +K    + AS+   I  L + G    A+    +M+++  +   + 
Sbjct: 751 DGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNE 810

Query: 563 Y---NILYRAKNNIE 574
           +   NI  R  NN E
Sbjct: 811 HENKNIRGRLNNNDE 825



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 188/411 (45%), Gaps = 25/411 (6%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M +SGV P + T+++LL  +  +    +  ++     +     ++Y+  IL+    + G 
Sbjct: 392 MRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGR 451

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-----KMLFRKIGELGLVATQ 245
            ++A ++L  + E G+  + V   ++I+G CK G++++A      M  R    LG +   
Sbjct: 452 ASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNS 511

Query: 246 H------------------TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                              TY  +I GL K G   +  +   +M    +SP    ++  I
Sbjct: 512 FIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC +GK+S  F++  EM  +    ++ TYN+LI GL  E ++ E   L+D+MK  GI 
Sbjct: 572 YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIF 631

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV TYN +I    + G+   A  L +++   G SP++ T+ +LI AF KA +   A +L
Sbjct: 632 PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQEL 691

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E+        E  Y+ + +  +   +  KA E++        +   + Y  LI  LC 
Sbjct: 692 F-EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            G + +AS + + M + +   +   +  +I    K G+ + A      M E
Sbjct: 751 DGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/591 (27%), Positives = 257/591 (43%), Gaps = 49/591 (8%)

Query: 28  AFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK------IISGRITS 80
           A S F WA  Q G QH   + + ++ LL+++ +     A    +LK        S  I  
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII--DAHLKSRLSDQALFYFHQMLDSGVR 138
            SF            F        K  L+  +I  D   K+ + ++A   FH+M+  G  
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 139 PRSNTFNSLLI-FVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           P     ++ ++  ++K+    +    F +  +C    D  ++  +I G  +AG   +A +
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           VL+ +      P  V Y  L++  CK G +ERA+ LFR +   G       YT LI G  
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K+G  K+    +++M   G  P + T+  +I   C  G   +  K F+EM       NVV
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY T+I GL K  RV  A R++  M   G  P+ +TY  L+DGFC  G  D+A +L ++L
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGN-----------SKMASD------------------- 406
                SP++  Y+ L+      G+           SK A++                   
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 407 ------LVREMEERGITPSEVTYTILIDSFVRSDD--MEKAFEMYSLMQKSGFSPDVYTY 458
                 + + M   G  P   TY ILI+   RS +  +E+AF +   ++K G+ PD  TY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L  GLC  G +  A K+           + V Y  +  G C +G   RA+ L  EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G  P+ A+Y   I  L +  K  +A    ++M+  G KP+V+ Y  L +A
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 219/468 (46%), Gaps = 9/468 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y S+I    KS    +A   F +M+++G RP   T   ++  + KS +F++    F 
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 166 EN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E  R   + +V ++  +I+G  + G +  AF ++  +   G  P+ V Y  L+DG CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG-LQKDGFEFYE--KMQLNGVSPSLY 281
            ++ A  L  ++ +         Y+ L+ GL   G ++K   + +E  K     + P L 
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC 509

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK--EMRVQEAERLLD 339
               +I   C  G++ E  ++F  M       +  TYN LI GLC+  E RV+ A  LL 
Sbjct: 510 CS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            ++  G  P+ +TY  L  G C  GE D+A ++  +  S G +  VV Y  L       G
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  L +EM  +G  P    Y  +I+  ++   +E A + +  M   G  P V TY 
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 460 VLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            L+  LC  GN+ EA   F SM    +L  + ++Y+ +I G+CK      AL+L  +M  
Sbjct: 688 ALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G VP   + +S    L + GK  +A+ LL +M   G  P  + +  +
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G    ++TYNCL++    E   S+ + + +EM    +A N  ++N LI    +  R  +A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIR 393
               + MK     P++ T+  L+D  C AG  +KAF +F+++ + G   P    +  ++R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              KA   K A ++  +ME+ G  P  + Y  +ID   ++   ++A ++   M      P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
              TYG+L++ LC  G ++ A +LF  M  +   PN V+Y  +I G+ K G    A  L 
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            EM E G  P++ +++  I  LC+ G + +A     +M++ G KP+V  Y  + +  + I
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 181/405 (44%), Gaps = 16/405 (3%)

Query: 68  TLILKIIS--GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           T I++ +S  GR+ ++    + ++ H    FP S         Y  ++D   K    D+A
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAH--GCFPDSVT-------YICLLDGFCKLGRLDEA 454

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-FFSENRCKVE-LDVYSFGILIK 183
                ++      P    ++SL+  +    S +K     F +++   E LD      +I 
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV 514

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD--IERAKMLFRKIGELGL 241
           G C+ G L++A  +  ++   G  P+   Y  LI+G C++ +  +ERA  L   + ++G 
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGY 574

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    TYT L  GL K G      +  E+    G +  +  Y  L    C +G+V     
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  +  A +   Y  +I GL K  ++++A +  D+M   G  P V TY  L+   C
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 362 DAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            AG  D+AF  F  + + G+   SV+ Y+ LI  F KA     A  L  +M  RG  P+ 
Sbjct: 695 HAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           VT   L D  VRS   EKA E+   M   G  P   T+  ++ GL
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 151/335 (45%), Gaps = 37/335 (11%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           SII    K+   D+A   F +M+  G +P + T+N                         
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN------------------------- 545

Query: 171 VELDVYSFGILIKGCCEAGD--LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                    ILI G C + +  + +AF +L+ LE++G+ P+ V YT L  G CK G+++R
Sbjct: 546 ---------ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +  +    G  A    YT L  GL   G        +++M   G +P    Y C+I+
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG-IS 347
                 K+ +  K FDEM  +     V TY  L+  LC    V EA    + M   G + 
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELV 716

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +V+ Y+ LI GFC A + D A +LF  + S G  P+ VT   L     ++G ++ A +L
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           ++EM   G  P   T+T ++D   +SD+  K  ++
Sbjct: 777 LQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 261/573 (45%), Gaps = 105/573 (18%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
           FPS S  +    LY  ++ + L+        + +  ML + V P++ TFN L+  + +S 
Sbjct: 108 FPSLSPSLP---LYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESR 164

Query: 156 SFDKGWLFF----SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN------------ 199
           +FD     F     +  C  E   ++ GIL++G C AG + +A E++N            
Sbjct: 165 AFDHALQLFEKMPQKGCCPNE---FTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVV 221

Query: 200 ----------------------QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI- 236
                                 ++ E+G  P+VV + S I   C+ G +  A  +FR + 
Sbjct: 222 YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQ 281

Query: 237 --GELGLVATQH-TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
              ELGL      T+ +++ G  K+G+  D     E M+  G   SL  YN  +      
Sbjct: 282 MDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRN 341

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E   + DEM  + +  N  TYN ++ GLC+   + +A  L+D M   G+ P+ + Y
Sbjct: 342 GELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAY 401

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + L+ G+C  G+  +A  + +++  NG  P+  T N L+ +  K G +  A +++++M E
Sbjct: 402 STLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNE 461

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS--------------------- 452
           +   P  VT  I+++   R+ +++KA E+ S M  +G +                     
Sbjct: 462 KCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNC 521

Query: 453 -PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PD  TY  LI+GLC  G ++EA K F  M    L P+ V Y+  I+ +CK+G    A R
Sbjct: 522 LPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFR 581

Query: 512 LL-----------------------------------GEMNEKGLVPNIASYSSTIGVLC 536
           +L                                    EM EKG+ P+I +Y++ I  LC
Sbjct: 582 VLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLC 641

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + GK  +A  LL++ML  G+ P+VS + IL +A
Sbjct: 642 EGGKAKDAISLLHEMLDKGISPNVSSFKILIKA 674



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 223/473 (47%), Gaps = 31/473 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++    +  ++++A     +M + GV P   TFNS +  + ++    +    F + 
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 168 RCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           +   EL     +V +F +++KG C+ G +  A  ++  ++++G   ++  Y   + G  +
Sbjct: 281 QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLR 340

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           NG++  A+++  ++   G+    +TY +++ GL +N +  D     + M  NGV P    
Sbjct: 341 NGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVA 400

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ L+H YC+ GKV E   +  EM       N  T NTL+  L KE R  EAE +L +M 
Sbjct: 401 YSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMN 460

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-------------------- 382
                P+ +T N +++G C  GE DKA  + +++ +NG +                    
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 383 --PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P  +TY  LI    K G  + A     EM  + + P  VTY   I SF +   +  AF
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M+++G S  + TY  LI GL     + E   L + M E  + P+   YN +I   
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCL 640

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA----EVLLN 549
           C+ G +  A+ LL EM +KG+ PN++S+   I    +   +  A    EV LN
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALN 693



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 213/458 (46%), Gaps = 26/458 (5%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILI 182
           +A     +M+  G+ P + T+N ++  + ++    D   L     R  V  D  ++  L+
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  G + +A  VL+++   G  PN     +L+    K G    A+ + +K+ E    
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQ 465

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS----------------------PSL 280
               T  +++ GL +NG      E   +M  NG +                      P  
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI+  C  G++ E  K F EM  + +  + VTY+T I   CK+ ++  A R+L  
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKD 585

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G S  + TYN LI G     +  + + L +++K  G SP + TYN +I    + G 
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL-MQKSGFSPDVYTYG 459
           +K A  L+ EM ++GI+P+  ++ ILI +F +S D + A E++ + +   G    +Y+  
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYS-- 703

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++ + L   G + EA +LF    +  L   + +Y  +I   C++     A  LL ++ +K
Sbjct: 704 LMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDK 763

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           G   + AS+   I  L + G   +A+ L  +M++L L+
Sbjct: 764 GYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELE 801



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 7/212 (3%)

Query: 364 GETDKAFRLFNQLKSN--GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           G  D A   F  L++     SPS+  YN+L+R+  +       S L  +M    + P   
Sbjct: 92  GHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTY 151

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T+ +LI S   S   + A +++  M + G  P+ +T G+L+ GLC  G +K+A +L N+ 
Sbjct: 152 TFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNN 211

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
              ++  N VVYN ++  +C+E  +  A RL+  MNE G++P++ +++S I  LC+ GK 
Sbjct: 212 NSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKV 270

Query: 542 PEAEVLLNQM---LKLGL-KPSVSLYNILYRA 569
            EA  +   M    +LGL +P+V  +N++ + 
Sbjct: 271 MEASRIFRDMQMDAELGLPRPNVVTFNLMLKG 302



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 12/283 (4%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           SN +     Y ++I+   K    ++A   F +ML   +RP S T+++ +    K      
Sbjct: 519 SNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISS 578

Query: 160 GWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVL---NQLEEMGFSPNVVIY 213
            +    +   N C   L  Y+  IL       G  N+ FE+    ++++E G SP++  Y
Sbjct: 579 AFRVLKDMERNGCSKTLQTYNALIL-----GLGSNNQIFEIYGLKDEMKEKGISPDICTY 633

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
            ++I   C+ G  + A  L  ++ + G+     ++ +LI    K+   K   E +E + L
Sbjct: 634 NNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE-VAL 692

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           N        Y+ + +E    G++SE  +LF+    R +      Y  LI  LC++ R+ +
Sbjct: 693 NICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLAD 752

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           A  LL ++   G   +  ++  +IDG    G   +A  L  ++
Sbjct: 753 ANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 2/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y SII + +K    +++     +M+ +G  P    FN ++    +S + +K    +    
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + D  S+ ILI G  + G L+++ ++L+++   G +P++  Y+SL+    K   ++
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++   G    +  +  LI GL + G  KD  E +++M  +G  P++  YN L+
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C+ G++ +   LF EM+    + +VVTYNTL+  +CK  RV+E  +L + M+ AG  
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNVIT++ LI G C  GE +KA  +F  +   G  P+  TY  LI    +A     A +L
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ-KSGFSPDVYTYGVLIHGLC 466
             +M +  I P  V Y  LI  + +   M++A ++Y  M   +G  P + T+  LI G C
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +  A++L   M    L  +   Y ++I G  +      AL +  +M EK  + +  
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S  S +G LC+ G   +A  +     K G  P+   + IL
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 206/422 (48%), Gaps = 2/422 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M D  +     T++S++  ++K    ++ +    E        DV++F  +++G   + +
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + KA EV   + E G+ P+ V Y  LI G  K G ++ +  +  ++   G   +   Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+  L K          +++M   G  P    +  LI   C  GKV +  + F +M    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              NV  YN L+ GLC   ++++A  L  +MK    SP+V+TYN L+D  C A   ++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +LF  +++ G  P+V+T++ LI    + G  + A ++   M E G  P++ TYT LI   
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM-WETKLEPN 489
            R++ + +A E++  M ++   PD   Y  LI G C +G+M EA KL+  M     L+P 
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V +N +I G+CK G   RA  L+ EM  KGL  +  +Y   I  L +  K  EA  +  
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 550 QM 551
           QM
Sbjct: 421 QM 422



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 196/393 (49%), Gaps = 2/393 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D++L    +M+  G  P    ++SL+  + K+   D     F E  R     D   F  L
Sbjct: 97  DESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYEL 156

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+AG +  A E   Q+ + G  PNV +Y  L+ G C +G +E+A  LF ++     
Sbjct: 157 ILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSC 216

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY  L+  + K    ++G + +E M+  G  P++ T++ LIH  C  G++ +  +
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F  M       N  TY TLI GLC+  +V +A  L ++M  A I P+ + YN LI G+C
Sbjct: 277 VFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 336

Query: 362 DAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             G  D+A +L+ ++    G  P++VT+N LI  F K G    A++LV EM  +G+    
Sbjct: 337 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS 396

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY ILI    R+  +++A E+Y  M++  F  D  +    + GLC  GN+ +A  +F +
Sbjct: 397 CTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEA 456

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
             ++   PN   + ++     K G    A +L+
Sbjct: 457 TRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 194/397 (48%), Gaps = 36/397 (9%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  +V+++  +IK   +     ++++VL ++   G +P+V  +  ++ G  ++ ++E+A+
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
                                              E Y+ M  +G  P   +Y+ LIH  
Sbjct: 66  -----------------------------------EVYQHMVESGYKPDNVSYHILIHGL 90

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              GK+ E  K+  EM  R    ++  Y++L+  L K  RV  A  L D+M   G  P+ 
Sbjct: 91  AKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDR 150

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + + +LI G C AG+   A   F Q+  +G  P+V  YNVL+     +G  + A+ L  E
Sbjct: 151 LMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAE 210

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+    +P  VTY  L+D+  ++  +E+  +++  M+ +G+ P+V T+  LIHGLC  G 
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++A ++F SM E   +PN   Y  +I G C+     +A  L  +M +  + P+  +Y+S
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 531 TIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
            I   C+ G   EAE L  +M    GL+P++  +N L
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 187/374 (50%), Gaps = 6/374 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S++ A  K+R  D A   F +M+  G  P    F  L++ + ++         F +  
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C+  + VY+  +L+ G C +G L +A  +  +++    SP+VV Y +L+D  CK   
Sbjct: 178 KHGCQPNVPVYN--VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E    LF  +   G V    T++ LI GL + G  +   E +  M   G  P+ YTY  
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM-A 344
           LI   C   KV +  +LF++M    +  + V YN+LI G CK   + EAE+L  +M   A
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ P ++T+N LIDGFC  G+  +A  L  ++ + G +    TY +LI   S+A     A
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            ++ ++M E+      V+    +    ++ ++++A+ ++   +KSG  P+  T+ +L   
Sbjct: 416 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 475

Query: 465 LCMKGNMKEASKLF 478
           L   G +++A KL 
Sbjct: 476 LIKLGRVEDAQKLM 489



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 2/297 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGIL 181
           +QA   F +M      P   T+N+LL  V K+   ++G   F   R    + +V +F  L
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL 261

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C  G+L KA EV   + E G  PN   YT+LI G C+   + +A+ LF K+ +  +
Sbjct: 262 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 Y  LI G  K G   +  + Y +M    G+ P++ T+N LI  +C  GK+    
Sbjct: 322 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L  EM  + +A +  TY  LI GL +  ++ EA  +  QM+      + ++    + G 
Sbjct: 382 ELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 441

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           C  G  D+A+ +F   + +G  P+  T+ +L  +  K G  + A  L+   + R IT
Sbjct: 442 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 111/229 (48%)

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+   I+ NV TY+ +I       + ++++++  ++ + G +P V  +N +++ F+++ N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A ++ + M E G  P  V+Y ILI    +   ++++ ++ S M   G +P +  Y  
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+  L     +  AS LF+ M      P+ +++  +I G C+ G    A     +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             PN+  Y+  +  LC  G+  +A  L  +M      P V  YN L  A
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDA 229


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 265/556 (47%), Gaps = 18/556 (3%)

Query: 25  PLKAFSLFNWASRQGLQ-HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +A  LF  A+RQ    HT +S + +L L    M +H        +  ++  +I  ++ 
Sbjct: 88  PAEALELFTAAARQPTAVHTTESCNYMLEL----MRAHGRVGDMAQVFDLMQKQIVKANV 143

Query: 84  -TPRSLLCHLTQLFPSSSNPVT-----------KSRLYESIIDAHLKSRLSDQALFYFHQ 131
            T  ++   +       S PV                Y  +I   +KS    +A+  +  
Sbjct: 144 GTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKA 203

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M++ G+ P   T++ L++   K    D   WL        V+ +VYS+ I I+   +A  
Sbjct: 204 MVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAAR 263

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            ++A+++L ++E+ G  P+VV +T +I   C  G +  AK +F K+        + TY  
Sbjct: 264 FDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYIT 323

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+     +G  +   E +  M  +G + ++ +Y  ++   C  G++ E   +FDEM+ + 
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKG 383

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           ++    +YN+LI G  K      A  L + M   G SPN  T+   I+ +  +G++ KA 
Sbjct: 384 ISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + +  +KS G  P V   N ++ + +++G   MA  +  E+++ G++P  +TYT++I   
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCC 503

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   ++A   +S M ++G  PDV     LI  L   G   EA KLF+ + E K+EP +
Sbjct: 504 SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTN 563

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++ G  +EG     + LL EM      PN+ +Y++ +  L ++G+   A  +L  
Sbjct: 564 GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYS 623

Query: 551 MLKLGLKPSVSLYNIL 566
           M + G  P +S YN +
Sbjct: 624 MTEKGCTPDLSSYNTV 639



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 1/462 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++D   K+   + A+   + M + G  P  +++N+++  +IK   F++ +  F + +
Sbjct: 601  YNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK 660

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   ++    + G + +A   + + + +   + +   + SL++G      +E
Sbjct: 661  KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVE 720

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++      I   G++        LI  L K+    +  + + K +  GVS    +YN LI
Sbjct: 721  KSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLI 780

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +E  +     LF EM+      +  TYN ++  + K MR++E  R+  +M   G  
Sbjct: 781  RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYE 840

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               +TYN +I G   +   ++A  L+  L S G SP+  TY  L+    KAG    A +L
Sbjct: 841  STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENL 900

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              EM E G  P+   Y IL++    + + E   +++  M + G +PD+ +Y VLI  LC 
Sbjct: 901  FNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCT 960

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G + +    F  + E  LEP+ ++YN++I G  K      A+ L  EM +KG+VPN+ +
Sbjct: 961  AGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYT 1020

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1021 YNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRG 1062



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++     GD+ + F+++   ++     NV  + ++  G    G +  A +    + E G
Sbjct: 117 LMRAHGRVGDMAQVFDLM---QKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAG 173

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    +TY  LI  L K+G   +  E Y+ M  +G+SPS+ TY+ L+  +  +  V    
Sbjct: 174 MSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVL 233

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L +EM  R V  NV +Y   I  L +  R  EA ++L +M+ +G  P+V+T+  +I   
Sbjct: 234 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVL 293

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K++ Q P  VTY  L+     +G+S+   ++   M   G   + 
Sbjct: 294 CDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNI 353

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+YT ++D+  +   +++A  ++  M++ G SP+ Y+Y  LI G         A +LFN 
Sbjct: 354 VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNH 413

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      PN   + + I  Y K G S +A++    M  KG+VP++A+ ++ +  L + G+
Sbjct: 414 MNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGR 473

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ +  ++  +G+ P    Y ++ +
Sbjct: 474 LGMAKRVFYELKDMGVSPDTITYTMMIK 501



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 188/383 (49%), Gaps = 12/383 (3%)

Query: 105  KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
            K+  Y S+I   +   L D A   F +M   G  P   T+N +L  + KS   ++     
Sbjct: 772  KTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQ 831

Query: 165  SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            +E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K 
Sbjct: 832  AEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKA 891

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G +  A+ LF ++ E G       Y +L+ G    G  ++  + +EKM   G++P + +Y
Sbjct: 892  GKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSY 951

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              LI   C  G++++G   F ++    +  +++ YN LI GL K  R++EA  L ++MK 
Sbjct: 952  TVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKK 1011

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG---N 400
             GI PN+ TYN LI     AG+  +A +++ +L   G  P+V TYN LIR +S +G   N
Sbjct: 1012 KGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDN 1071

Query: 401  SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            +  A D V      G++      T LI   V  + +  A  +++ M++ G  PD +TY +
Sbjct: 1072 AYAAYDCV----AVGVS----LKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNL 1123

Query: 461  LIHGLCMKGNMKEASKLFNSMWE 483
            ++  +     ++E  K+   + E
Sbjct: 1124 ILDAIGKSMRIEEMLKVQEEIAE 1146



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 35/274 (12%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSF 157
            S  P T    Y  ++D  LK+     A   F++ML+ G +P    +N LL    I   + 
Sbjct: 875  SPTPCT----YGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTE 930

Query: 158  DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            +   +F       +  D+ S+ +LI   C AG LN       QL E+G  P+++IY  LI
Sbjct: 931  NVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLI 990

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            DG  K+  IE A  LF ++ + G+V   +TY  LI  L K G   +  + YE++ + G  
Sbjct: 991  DGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWK 1050

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFK------------------------------LFDEMR 307
            P+++TYN LI  Y   G     +                               LF EM+
Sbjct: 1051 PNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMK 1110

Query: 308  HREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
             R    +  TYN ++  + K MR++E  ++ +++
Sbjct: 1111 RRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 257/591 (43%), Gaps = 49/591 (8%)

Query: 28  AFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK------IISGRITS 80
           A S F WA  Q G QH   + + ++ LL+++ +     A    +LK        S  I  
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII--DAHLKSRLSDQALFYFHQMLDSGVR 138
            SF            F        K  L+  +I  D   K+ + ++A   FH+M+  G  
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 139 PRSNTFNSLLI-FVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           P     ++ ++  ++K+    +    F +  +C    D  ++  +I G  +AG   +A +
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           VL+ +      P  V Y  L++  CK G +ERA+ LFR +   G       YT LI G  
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K+G  K+    +++M   G  P + T+  +I   C  G   +  K F+EM       NVV
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY T+I GL K  RV  A R++  M   G  P+ +TY  L+DGFC  G  D+A +L ++L
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGN-----------SKMASD------------------- 406
                SP++  Y+ L++     G+           SK A++                   
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521

Query: 407 ------LVREMEERGITPSEVTYTILIDSFVRSDD--MEKAFEMYSLMQKSGFSPDVYTY 458
                 + + M   G  P   TY ILI+   RS +  +E+AF +   ++  G+ PD  TY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L  GLC  G +  A K+           + V Y  +  G C +G   RA+ L  EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G  P+ A+Y   I  L +  K  +A    ++M+  G KP+V+ Y  L +A
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 218/468 (46%), Gaps = 9/468 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y S+I    KS    +A   F +M+++G RP   T   ++  + KS +F++    F 
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 166 EN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E  R   + +V ++  +I+G  + G +  AF ++  +   G  P+ V Y  L+DG CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE-FYE--KMQLNGVSPSLY 281
            ++ A  L  ++ +         Y+ L+ GL   G  ++  +  +E  K     + P L 
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC 509

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK--EMRVQEAERLLD 339
               +I   C  G++ E  ++F  M       +  TYN LI GLC+  E RV+ A  LL 
Sbjct: 510 CS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            ++M G  P+ +TY  L  G C  GE D+A ++  +  S G +  VV Y  L       G
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  L +EM  +G  P    Y  +I+  ++   +E A + +  M   G  P V TY 
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 460 VLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            L+  LC  GN+ EA   F  M    +L  + ++Y+ +I G+CK      AL+L  +M  
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +G VP   + +S    L + GK  +A+ LL +M   G  P  + +  +
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G    ++TYNCL++    E   S+ + + +EM    +A N  ++N LI    +  R  +A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIR 393
               + MK     P++ T+  L+D  C AG  +KAF +F+++ + G   P    +  ++R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              KA   K A ++  +ME+ G  P  + Y  +ID   ++   ++A ++   M      P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
              TYG+L++ LC  G ++ A +LF  M  +   PN V+Y  +I G+ K G    A  L 
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            EM E G  P++ +++  I  LC+ G + +A     +M++ G KP+V  Y  + +  + I
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 16/405 (3%)

Query: 68  TLILKIIS--GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           T I++ +S  GR+ ++    + ++ H    FP S         Y  ++D   K    D+A
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAH--GCFPDSVT-------YICLLDGFCKLGRLDEA 454

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-FFSENRCKVE-LDVYSFGILIK 183
                ++      P    ++SL+  +    S +      F +++   E LD      +I 
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV 514

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD--IERAKMLFRKIGELGL 241
           G C+ G L++A  +  ++   G  P+   Y  LI+G C++ +  +ERA  L   +  +G 
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    TYT L  GL K G      +  E+    G +  +  Y  L    C +G+V     
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF EM  +  A +   Y  +I GL K  ++++A +  D+M   G  P V TY  L+   C
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 362 DAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            AG  D+AF  F  + + G+   SV+ Y+ LI  F KA     A  L  +M  RG  P+ 
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           VT   L D  VRS   EKA E+   M   G  P   T+  ++ GL
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 24/314 (7%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           SII    K+   D+A   F +M+  G +P + T+N L+  + +S           ENR +
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS----------RENRVE 560

Query: 171 VEL-------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                           D  ++  L  G C+ G++++A ++L +    G++ +VV YT+L 
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C  G ++RA  LF+++   G       Y  +I GL K    +D  +F+++M   G  
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAER 336
           P++ TY  L+   C+ G V E F  F+ M  R E+  +V+ Y+ LI G CK ++V  A +
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALK 740

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L + M   G  P  +T   L DG   +G+T+KA  L  ++ + G  P   T+  ++    
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800

Query: 397 KAGNSKMASDLVRE 410
           K+  S     LV+E
Sbjct: 801 KSDESGKLLKLVQE 814


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 264/556 (47%), Gaps = 18/556 (3%)

Query: 25  PLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +A   F  A+R+  + HT  S + +L L    M  H        +  ++  +I  ++ 
Sbjct: 70  PAEALERFRSAARKPRVAHTTASCNYMLEL----MRGHGRVGDMAEVFDVMQRQIVKANV 125

Query: 84  -TPRSLLCHLTQLFPSSSNPVTKSRLYES--IIDAH---------LKSRLSDQALFYFHQ 131
            T  ++   L       S PV    + E+  +++A+         +KS    +AL  +  
Sbjct: 126 GTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRV 185

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M+  GV P   T++ L++   K    +   WL        V+ +VYS+ I I+   +A  
Sbjct: 186 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 245

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            ++A+ +L ++E  G  P+V+ +T LI   C  G I  AK +F K+ +      + TY  
Sbjct: 246 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 305

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+     NG  +   E +  M+ +G + ++  Y  +I   C  G+V E  ++FDEM+ + 
Sbjct: 306 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 365

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +     +YN+LI G  K  R  +A  L   M + G  PN  T+   I+ +  +GE+ KA 
Sbjct: 366 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAI 425

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + +  +KS G  P VV  N ++   +K+G   MA  +  E++  G++P  +TYT++I   
Sbjct: 426 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 485

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   ++A +++  M ++   PDV     LI  L   G   EA ++F  + E  LEP D
Sbjct: 486 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 545

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++ G  +EG     + LL EM      PN+ +Y++ +  LC++G   +A  +L  
Sbjct: 546 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 605

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G  P +S YN +
Sbjct: 606 MTTKGCIPDLSSYNTV 621



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 217/462 (46%), Gaps = 1/462 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +I+D   K+   + AL   + M   G  P  +++N+++  ++K   +++ +  F + +
Sbjct: 583  YNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 642

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   ++    + G + +A  ++ +   + G   +     SL++G  K   IE
Sbjct: 643  KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 702

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++      I   G+         LI  L K     +  E  +K +  GVS     YN LI
Sbjct: 703  KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 762

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +E  +     LF EM+      +  TYN L+  + K MR++E  ++ ++M   G  
Sbjct: 763  CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 822

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               +TYN +I G   +   ++A  L+  L S G SP+  TY  L+    KAG  + A +L
Sbjct: 823  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 882

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              EM E G   +   Y IL++    + + EK   ++  M   G +PD+ +Y ++I  LC 
Sbjct: 883  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 942

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G + +    F  + E  LEP+ + YN++I G  K      A+ L  EM +KG+VPN+ +
Sbjct: 943  AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1002

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1003 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1044



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 231/498 (46%), Gaps = 42/498 (8%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  ++ A  K R  +  L+   +M   GV+P   ++   +  + ++  FD+ + 
Sbjct: 192 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 251

Query: 163 FFS--ENR-CKVELDVYSFGILIKGCCEAGDLNKA------------------------- 194
             +  EN  CK   DV +  +LI+  C+AG ++ A                         
Sbjct: 252 ILAKMENEGCKP--DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 309

Query: 195 ----------FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                      E+ N ++  G++ NVV YT++ID  C+ G +  A  +F ++ + G+V  
Sbjct: 310 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 369

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q++Y  LI G  K     D  E ++ M ++G  P+ YT+   I+ Y   G+  +  + ++
Sbjct: 370 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 429

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  G+SP+ ITY  +I     A 
Sbjct: 430 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 489

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A ++F  +  N   P V+  N LI    KAG    A  +  +++E  + P++ TY 
Sbjct: 490 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 549

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L+    R   +++   +   M  S + P++ TY  ++  LC  G + +A  +  SM   
Sbjct: 550 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 609

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+   YN +I+G  KE     A  +  +M +K L+P+ A+  + +    + G   EA
Sbjct: 610 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEA 668

Query: 545 -EVLLNQMLKLGLKPSVS 561
             ++ +  L+ G K   S
Sbjct: 669 LHIIKDYFLQPGSKTDRS 686



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++G    GD+ + F+V+   +      NV  + ++  G    G +  A +    + E G
Sbjct: 99  LMRGHGRVGDMAEVFDVM---QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 155

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V   +TY  L+  L K+G  ++  E Y  M ++GV PS+ TY+ L+  +     V    
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM    V  NV +Y   I  L +  R  EA R+L +M+  G  P+VIT+  LI   
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K + Q P  VTY  L+  F   G+S+   ++   M+  G   + 
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V YT +ID+  +   + +A EM+  M++ G  P+ Y+Y  LI G        +A +LF  
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M     +PN   + + I  Y K G S +A++    M  KG+VP++ + ++ +  L + G+
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ + +++  +G+ P    Y ++ +
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIK 483



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 203/421 (48%), Gaps = 4/421 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--N 167
            +I+ + +K  L  +AL       L  G +   ++ +SL+  ++K    +K  + F+E   
Sbjct: 654  TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS-IEFAEIIA 712

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + LD +    LIK  C+     +A E++ + +  G S    +Y SLI G      I+
Sbjct: 713  SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 772

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A+ LF ++ ELG    + TY +L+  + K+   ++  +  E+M   G   +  TYN +I
Sbjct: 773  IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 832

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                   ++ +   L+  +  +  +    TY  L+ GL K  R+++AE L ++M   G  
Sbjct: 833  SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 892

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             N   YN L++G   AG T+K   LF  +   G +P + +Y ++I    KAG        
Sbjct: 893  ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTY 952

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             R++ E G+ P  +TY +LID   +S  +E+A  +++ MQK G  P++YTY  LI  L  
Sbjct: 953  FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1012

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G   EA K++  +     +PN   YN +I GY   G++  A    G M   G +PN ++
Sbjct: 1013 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1072

Query: 528  Y 528
            Y
Sbjct: 1073 Y 1073



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 224/517 (43%), Gaps = 57/517 (11%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           P +  P  + R  E +I A   +    +AL  F     +  +PR       +     SC+
Sbjct: 45  PRAPPPCDERRAAEDVIHALRSADGPAEALERFRS---AARKPR-------VAHTTASCN 94

Query: 157 F------------DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +            D   +F    R  V+ +V +F  +  G    G L  A   L  ++E 
Sbjct: 95  YMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA 154

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G   N   Y  L+    K+G    A  ++R +   G+V +  TY+VL+    K    +  
Sbjct: 155 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 214

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                +M+ +GV P++Y+Y   I       +  E +++  +M +     +V+T+  LI  
Sbjct: 215 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 274

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LC   R+ +A+ +  +MK +   P+ +TY  L+D F D G++     ++N +K++G + +
Sbjct: 275 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 334

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM-- 442
           VV Y  +I A  + G    A ++  EM+++GI P + +Y  LI  F+++D    A E+  
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394

Query: 443 ---------------------------------YSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                                            Y LM+  G  PDV     ++ GL   G
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A ++F+ +    + P+ + Y MMI    K      A+++  +M E   VP++ + +
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S I  L + G+  EA  +  Q+ ++ L+P+   YN L
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 551



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 162/323 (50%), Gaps = 1/323 (0%)

Query: 105  KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
            K+ LY S+I   +   L D A   F +M + G  P   T+N LL  + KS   ++     
Sbjct: 754  KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 813

Query: 165  SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K 
Sbjct: 814  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 873

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G IE A+ LF ++ E G  A    Y +L+ G    G  +     ++ M   G++P + +Y
Sbjct: 874  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 933

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              +I   C  G++++G   F ++    +  +++TYN LI GL K  R++EA  L ++M+ 
Sbjct: 934  TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 993

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             GI PN+ TYN LI     AG+  +A +++ +L + G  P+V TYN LIR +S +G++  
Sbjct: 994  KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1053

Query: 404  ASDLVREMEERGITPSEVTYTIL 426
            A      M   G  P+  TY  L
Sbjct: 1054 AYAAYGRMIVGGCLPNSSTYMQL 1076


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 194/392 (49%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V  + +LI G C  GD+ +   +L ++E  GF P +V Y SLI+   K GD+E+   LF 
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ + GL      Y  +I  L K           ++M  +G  P + T+N LI   C+EG
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 358

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            V +      E   RE+  N ++Y  LI G C    +  A  LL +M   G +P+V+T+ 
Sbjct: 359 HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFG 418

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G   AG+  +A  +  ++      P V  YNVLI    K      A +++ EM E+
Sbjct: 419 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEK 478

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            + P E  Y  LID F+RS+++  A +++  M+  G  PD+ +   +I G C  G M EA
Sbjct: 479 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEA 538

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
               ++M +    P++  Y  +I GY K+GN   ALR L +M ++   PN+ +YSS I  
Sbjct: 539 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 598

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            C+ G    AE L   M    L P+V  Y IL
Sbjct: 599 YCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 204/450 (45%), Gaps = 16/450 (3%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y S+IDA  K   + QA+    QM  SG  P   TFN+L+  +       K   F  E
Sbjct: 310 QIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 369

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R ++  +  S+  LI G C  G+L  A ++L ++   G +P+VV + +LI G    G 
Sbjct: 370 AIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGK 429

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A ++  K+ E  +    + Y VLI GL K  +        E+M    V P  + Y  
Sbjct: 430 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYAT 489

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +     + +  K+F+ M H+ V  ++V+ N +I G C+   + EA   +  M+  G
Sbjct: 490 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 549

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY  +I G+   G  + A R    +      P+VVTY+ LI  + K G++  A 
Sbjct: 550 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAE 609

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   M+   ++P+ VTYTILI S  + D + +A   +  M  +  SP+  T   L++GL
Sbjct: 610 GLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669

Query: 466 ------------CMKGNMKEASKL---FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                       C    +     L   F  +     +P +  YN +IF  C+      AL
Sbjct: 670 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 729

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                M +KG VPN  ++ S +   C  GK
Sbjct: 730 DFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 190/393 (48%), Gaps = 1/393 (0%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            G L+    +AG L KA ++  +L E+ G  P V     L+    +    + A+ L+ ++
Sbjct: 136 LGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 195

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                 A  ++  VL+ GL   G  ++G +  E     G  P +  YN LI  YC  G +
Sbjct: 196 LGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 255

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
             G  L  EM  +     +VTY +LI  L K+  +++   L  +M+  G+SPNV  YN +
Sbjct: 256 GRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSV 315

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           ID  C      +A  +  Q+ ++G  P ++T+N LI      G+ + A   +RE   R +
Sbjct: 316 IDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 375

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P++++YT LI  F    ++  A ++   M   G +PDV T+G LIHGL + G + EA  
Sbjct: 376 NPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALI 435

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +   M E ++ P+  +YN++I G CK+     A  +L EM EK + P+   Y++ I    
Sbjct: 436 VREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 495

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +     +A  +   M   G++P +   N + + 
Sbjct: 496 RSENLGDARKIFEFMEHKGVRPDIVSCNAMIKG 528



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 223/514 (43%), Gaps = 56/514 (10%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
            Y  +ID + +     + L    +M   G  P   T+ SL+  + K    +K G LF   
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  +V  +  +I   C+     +A  +L Q+   G  P+++ + +LI G C  G +
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 360

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A+   R+     L   Q +YT LI G    G      +   +M   G +P + T+  L
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 420

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----- 341
           IH     GKVSE   + ++M  R+V  +V  YN LI GLCK+  +  A+ +L++M     
Sbjct: 421 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 480

Query: 342 ------------------------------KMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                                         +  G+ P++++ N +I G+C  G   +A  
Sbjct: 481 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAIL 540

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
             + ++  G  P   TY  +I  ++K GN   A   + +M +R   P+ VTY+ LI+ + 
Sbjct: 541 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 600

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++ D + A  +++ MQ    SP+V TY +LI  L  K  +  A   F +M      PNDV
Sbjct: 601 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 660

Query: 492 VYNMMIFGY------------CKEGNSYRALRLLGEMNEKGLV-----PNIASYSSTIGV 534
             + ++ G             C     +    LL  +  K LV     P  ++Y++ I  
Sbjct: 661 TLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL--VVFKKLVFDIGDPRNSAYNAIIFS 718

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPS-VSLYNILY 567
           LC+     EA    N+M K G  P+ ++  ++LY
Sbjct: 719 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLY 752



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 1/191 (0%)

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY-TILIDSFVRSDDMEK 438
           G +P+      L+ A++ AG    A+D+   + E+  +  EVT+   L+   V     + 
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++Y  M       D Y+  VL+ GLC++G ++E  KL  + W     P+ V YN++I 
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYC+ G+  R L LLGEM  KG +P + +Y S I  L + G   +   L  +M K GL P
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 559 SVSLYNILYRA 569
           +V +YN +  A
Sbjct: 308 NVQIYNSVIDA 318



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 112/265 (42%), Gaps = 36/265 (13%)

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTYN------- 389
           L  M +AG +P       L+  + DAG   KA  +  +L+   G  P V   N       
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180

Query: 390 ----------------------------VLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                                       VL+R     G  +    L+      G  P  V
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 240

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y +LID + R  DM +   +   M+  GF P + TYG LI+ L  KG++++   LF  M
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  L PN  +YN +I   CK  ++ +A+ +L +M   G  P+I ++++ I  LC +G  
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 360

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
            +AE  L + ++  L P+   Y  L
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPL 385



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 28/281 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID  ++S     A   F  M   GVRP   + N+++    +     +  L  S  
Sbjct: 486 VYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNM 545

Query: 168 RCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           R KV    D +++  +I G  + G+LN A   L  + +    PNVV Y+SLI+G CK GD
Sbjct: 546 R-KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 604

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN- 284
            + A+ LF  +    L     TYT+LI  LFK         ++E M LN  SP+  T + 
Sbjct: 605 TDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 664

Query: 285 ----------CLIHEYCNEGKVSEG-------FK--LFDEMRHREVACNVVTYNTLICGL 325
                     C+I+  C       G       FK  +FD    R  A     YN +I  L
Sbjct: 665 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSA-----YNAIIFSL 719

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           C+   ++EA    ++M   G  PN IT+  L+ GFC  G++
Sbjct: 720 CRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 760


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 281/626 (44%), Gaps = 74/626 (11%)

Query: 3   QSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS 62
           + + GE   L   L S+   L    AF +F   S++G+    ++ +++L  L+     H 
Sbjct: 180 EQRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHK 239

Query: 63  -----HAAAQTLILKIISGRITSSSFT-------PRSLLCHLTQL--FPSSSNPVTKSRL 108
                  A Q +   + +     ++F           L C +  L  FP   N VT    
Sbjct: 240 SYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFP---NVVT---- 292

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   KS   ++AL +  +M+ S V P   T+  L+  ++K   F++       N 
Sbjct: 293 YNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEA------NE 346

Query: 169 CKVELDVYSFGI---------LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
             VE+  YS G          LI G C  GD+ +A  V +++   G  PN V + +L+ G
Sbjct: 347 VLVEM--YSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQG 404

Query: 220 CCKNGDIERAKMLFRKIGELGLVA-----------------------------------T 244
            C++  +E+A+ +   I   GL                                     +
Sbjct: 405 FCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVS 464

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQ-LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               T L+ GL K     +  E + K+  + G++ +  T N L+H  C  G + E F++ 
Sbjct: 465 DSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVL 524

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            +M  + +  + ++YNTLI G CK  +++EA +L ++M      P+  TYN L+ G  D 
Sbjct: 525 KQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADM 584

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+ D   RL ++ K  G  P+V TY +L+  + KA   + A    + ++   +  S V Y
Sbjct: 585 GKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVY 644

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            ILI ++ R  ++ +AF++   M+  G  P   TY  LIHG+C  G + EA ++F  M  
Sbjct: 645 NILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN 704

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L PN   Y  +I G+CK G       +L EM+  G+ PN  +Y+  I   C+ G   E
Sbjct: 705 EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKE 764

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  LLN+M++ G+ P    YN L + 
Sbjct: 765 ARELLNEMIRNGIAPDTVTYNALQKG 790



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 209/435 (48%), Gaps = 6/435 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           ++ ++ID + +     +AL    +M   G++P   TFN+LL    +S   ++     ++ 
Sbjct: 362 VFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYI 421

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK-N 223
             +   V +DV S+  +I    E      A +++ +L       +  + T L+ G CK  
Sbjct: 422 LSSGLSVNMDVCSY--VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCE 479

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G  E  ++ F+     GL A   T   L+ GL + G  ++ FE  ++M   G+     +Y
Sbjct: 480 GHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISY 539

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI   C  GK+ E FKL +EM  +E   +  TYN L+ GL    ++ +  RLL + K 
Sbjct: 540 NTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKE 599

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G  PNV TY  L++G+C A   + A + F  L       S V YN+LI A+ + GN   
Sbjct: 600 YGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTE 659

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   M+ RGI P+  TY+ LI        +++A E++  M+  G  P+V+ Y  LI 
Sbjct: 660 AFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIG 719

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C  G M     +   M    + PN + Y +MI GYCK GN   A  LL EM   G+ P
Sbjct: 720 GHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAP 779

Query: 524 NIASYSSTIGVLCQD 538
           +  +Y++     C++
Sbjct: 780 DTVTYNALQKGYCKE 794



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 253/558 (45%), Gaps = 18/558 (3%)

Query: 25  PLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI----- 78
           P      F +A+R    + T +S  ++LR LL+         A+ L+ ++I G +     
Sbjct: 98  PKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLADSFV---PRARFLLARLIDGHVPTWSS 154

Query: 79  -TSSSFTPR-----SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
            T++SF  R     S +  L Q   S    + +  L   I+ +  K   S  A   F   
Sbjct: 155 KTTTSFHDRLREIASSMLELNQ--GSDEQRLGELDLLLHILCSQFKCLGSRCAFDIFVMF 212

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
              GV P   T N LL  ++K+    K +  F      V  DV++F   I   C+ G + 
Sbjct: 213 SKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVG 272

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A ++  ++E +G  PNVV Y ++IDG  K+G  E A     ++    +  +  TY VLI
Sbjct: 273 DAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLI 332

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K  + ++  E   +M   G +P+   +N LI  YC +G + E  ++ DEM  + + 
Sbjct: 333 SGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMK 392

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N VT+NTL+ G C+  ++++AE++L  +  +G+S N+   + +I    +      A ++
Sbjct: 393 PNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKI 452

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKA-GNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
             +L S     S      L+    K  G+S+      +    +G+  + VT   L+    
Sbjct: 453 VTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLC 512

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
              +ME+ FE+   M + G   D  +Y  LI G C  G ++EA KL   M + + +P+  
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTY 572

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN ++ G    G      RLL E  E G VPN+ +Y+  +   C+  +  +A      +
Sbjct: 573 TYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNL 632

Query: 552 LKLGLKPSVSLYNILYRA 569
               ++ S  +YNIL  A
Sbjct: 633 DYEKVELSSVVYNILIAA 650



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 146/293 (49%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD  S+  LI GCC+ G + +AF++  ++ +  F P+   Y  L+ G    G I+    L
Sbjct: 534 LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRL 593

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             +  E G V   +TY +L+ G  K    +D  +F++ +    V  S   YN LI  YC 
Sbjct: 594 LHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCR 653

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G V+E FKL D M+ R +     TY++LI G+C   RV EA+ + ++M+  G+ PNV  
Sbjct: 654 IGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFC 713

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G C  G+ D    +  ++ SNG  P+ +TY ++I  + K GN K A +L+ EM 
Sbjct: 714 YTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMI 773

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             GI P  VTY  L   + +  ++    +            +  TY  LIH L
Sbjct: 774 RNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKL 826


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 253/530 (47%), Gaps = 61/530 (11%)

Query: 86  RSLLCHLTQLFPSSS--NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           R  L  L++L  SS+  +P T ++    +I+    S     +L +   ++  G  P  ++
Sbjct: 3   REALQFLSRLRKSSNLPDPFTCNKHIHQLIN----SNCGILSLKFLAYLVSRGYTPHRSS 58

Query: 144 FNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           FNS++ FV K      G + F+E+      R   E DV S+  LI G C  GD+  A  V
Sbjct: 59  FNSVVSFVCK-----LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113

Query: 198 LNQLE-EMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV-----ATQHTYT 249
           L  L    GF   P++V + SL +G        + KML      +G++         TY+
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNG------FSKMKMLDEVFVYMGVMLKCCSPNVVTYS 167

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
             I    K+G  +   + +  M+ + +SP++ T+ CLI  YC  G +     L+ EMR  
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            ++ NVVTY  LI G CK+  +Q AE +  +M    + PN + Y  +IDGF   G++D A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            +   ++ + G    +  Y V+I      G  K A+++V +ME+  + P  V +T ++++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYT------------------------------YG 459
           + +S  M+ A  MY  + + GF PDV                                Y 
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYT 407

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           VLI  LC +G+  E  +LF+ + E  L P+  +Y   I G CK+GN   A +L   M ++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GL+ ++ +Y++ I  L   G   EA  + ++ML  G+ P  +++++L RA
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 207/419 (49%), Gaps = 7/419 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-FFSEN 167
           + S+ +   K ++ D+   Y   ML     P   T+++ +    KS         F S  
Sbjct: 132 FNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  +V +F  LI G C+AGDL  A  +  ++  +  S NVV YT+LIDG CK G+++
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA+ ++ ++ E  +      YT +I G F+ G   +  +F  KM   G+   +  Y  +I
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GK+ E  ++ ++M   ++  ++V + T++    K  R++ A  +  ++   G  
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+  + +IDG    G+  +A   F   K+N      V Y VLI A  K G+      L
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERL 425

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             ++ E G+ P +  YT  I    +  ++  AF++ + M + G   D+  Y  LI+GL  
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           KG M EA ++F+ M  + + P+  V++++I  Y KEGN   A  LL +M  +GLV  ++
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 37/273 (13%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V+EA + L +++ +   P+  T NK I    ++     + +    L S G +P   ++N 
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA-FEMYSLMQKS 449
           ++    K G  K A D+V  M   G  P  ++Y  LID   R+ D+  A   + SL    
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 450 GF------------------------------------SPDVYTYGVLIHGLCMKGNMKE 473
           GF                                    SP+V TY   I   C  G ++ 
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A K F+SM    L PN V +  +I GYCK G+   A+ L  EM    +  N+ +Y++ I 
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C+ G+   AE + ++M++  ++P+  +Y  +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/217 (18%), Positives = 92/217 (42%), Gaps = 31/217 (14%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S+ V    ++ ++++A+ KS     A+  +H++++ G  P     ++++  + K+    +
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391

Query: 160 GWLFFSENR-------------CK----VEL--------------DVYSFGILIKGCCEA 188
             ++F   +             CK    +E+              D + +   I G C+ 
Sbjct: 392 AIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+L  AF++  ++ + G   +++ YT+LI G    G +  A+ +F ++   G+      +
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +LI    K G      +    MQ  G+  ++   +C
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 255/540 (47%), Gaps = 32/540 (5%)

Query: 28  AFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           A + F WA RQ    H P    ++   LL  +S          +L++++ R      +P 
Sbjct: 179 ALNFFYWADRQWRYSHHP----LVYYTLLDVLSKTKLCQGARRVLRLMTRR--GIELSPE 232

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           +  C +          V+ SR            +L + AL     M  +GV P  +  N+
Sbjct: 233 AFGCVM----------VSYSR----------AGKLRN-ALRVLTLMQKAGVEPNLSICNT 271

Query: 147 LLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
            +  ++K C  +K   F    +   ++ D+ ++  LIKG C+   +  A E++  L   G
Sbjct: 272 TIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKG 331

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDG 264
             P+ V Y +++   CK   IE+ K L  K + +  L+  Q TY  LI  L K+G   D 
Sbjct: 332 CPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDA 391

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
             F ++ +  G       Y+ ++H +C +G++ E   L  +M  R    +VVTY  ++ G
Sbjct: 392 LAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDG 451

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C+  R+ EA+++L QM   G  PN ++Y  L++G C +G++ +A  + N  + +  +P+
Sbjct: 452 FCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 511

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +TY V++  F + G    A DL REM E+G  P+ V   +LI S  ++  + +A +   
Sbjct: 512 AITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 571

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                G + +V  +  +IHG C  G+M+ A  +   M+ +   P+ V Y  +     K+G
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  L+ +M  KGL P   ++ S I   CQ G+  +   LL++M+K   KP  ++YN
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK--RKPFRTIYN 689



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 220/464 (47%), Gaps = 5/464 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKS 154
            PS   P  K   Y +++    K +  +Q      +M+ DS + P   T+N+L+  + K 
Sbjct: 327 LPSKGCPPDKVSYY-TVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKH 385

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              D    F  E   K   +D   +  ++   C+ G +++A  ++  +     +P+VV Y
Sbjct: 386 GHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTY 445

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T+++DG C+ G I+ AK + +++ + G      +YT L+ GL  +G   +  E     + 
Sbjct: 446 TAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE 505

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +  +P+  TY  ++H +  EGK+SE   L  EM  +      V  N LI  LC+  +V E
Sbjct: 506 HWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE 565

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A++ L++    G + NV+ +  +I GFC  G+ + A  +   +  + + P  VTY  L  
Sbjct: 566 AKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFD 625

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  K G    A++L+ +M  +G+ P+ VT+  +I  + +   ++    +   M K    P
Sbjct: 626 ALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KP 683

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
               Y  +I  LC  GN++EA KL   +  T  + +    ++++    K+G +  A ++ 
Sbjct: 684 FRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVA 743

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            +M  + L P++         L  DG   EA+ L+ + ++ G++
Sbjct: 744 CQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 224/521 (42%), Gaps = 16/521 (3%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSL--LCHLTQLFPSSSNPVTKSRLYE-------SII 113
           H +       I S  I  S F    +  +C L  L  S+ NP  + RL         S++
Sbjct: 108 HGSNDKQTQNIASIEIDDSEFRHPVVREVCRLITL-SSAWNPNFEGRLRHLLRSLKPSLV 166

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSN--TFNSLLIFVIKS--CSFDKGWLFFSENRC 169
            A L+S+  ++    F    D   R   +   + +LL  + K+  C   +  L     R 
Sbjct: 167 CAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRR- 225

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +EL   +FG ++     AG L  A  VL  +++ G  PN+ I  + I    K   +E+A
Sbjct: 226 GIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA 285

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
                ++   G+     TY  LI G       +D  E    +   G  P   +Y  ++  
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345

Query: 290 YCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            C E K+ +   L ++M +   +  + VTYNTLI  L K     +A   L + +  G   
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           + + Y+ ++  FC  G  D+A  L   + S   +P VVTY  ++  F + G    A  ++
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           ++M + G  P+ V+YT L++    S    +A EM ++ ++  ++P+  TYGV++HG   +
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  L   M E    P  V  N++I   C+      A + L E   KG   N+ ++
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++ I   CQ G    A  +L  M      P    Y  L+ A
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDA 626


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 5/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSE 166
           Y  ++D   ++R  D  L  F  +L +G++    T ++LL  +  +   ++    L    
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNG 224
           +      +V+S+ I++KG C+     +A ++   + + G   SPNVV Y ++I G  K G
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +  +A  LF ++   G+     TY ++I  L K            +M  NG  P   TYN
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           C+IH Y   G++ E  K+F +M+ R +  N+V  N+ +  LCK  R +EA  + D M   
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++++Y  L+ G+   G       LFN +KSNG +     +N+LI A++K G    A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             +  EM+++G++P  VTY+ +I +F R   +  A E ++ M   G  P+   Y  +I G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 465 LCMKGNMKEASKLFNSMWETKL-EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            CM G + +A +L + M    +  P+ V +N +I   CK+G    A  +   + + G  P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ +++S I   C  GK  +A  +L+ M  +G++  +  Y+ L
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 225/468 (48%), Gaps = 2/468 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K   + +A   FH+M   GV+P   T+N ++  + K+ + DK  L   +  
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + D  ++  +I G    G L +A ++  +++  G  PN+VI  S +   CK+G  +
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSK 387

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   G      +Y  L+ G    G   D    +  M+ NG++     +N LI
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y   G V +   +F EM+ + V+ +VVTY+T+I    +  R+ +A    +QM   GI 
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASD 406
           PN   Y+ +I GFC  G   KA  L +++ + G   P +V +N +I +  K G    A D
Sbjct: 508 PNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHD 567

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   + + G  P  +T+T LID +     M+KAF++   M+  G   D+ TY  L+ G  
Sbjct: 568 IFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYF 627

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + +   LF  M    ++PN V Y +M+ G  + G +  A +   EM E G    ++
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            Y   +G LC++    EA +L  ++  + +K S+++ N +  A   ++
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 206/422 (48%), Gaps = 2/422 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F+ M  +G+      FN L+    K    D   L F+E + + V  DV ++  +I     
Sbjct: 428 FNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR 487

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L  A E  NQ+   G  PN  +Y S+I G C +G + +AK L  ++   G+      
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +   +I  L K+G   D  + ++ +   G  P + T+  LI  YC  GK+ + FK+ D M
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               V  ++VTY+TL+ G  K  R+ +   L  +M+  G+ PN +TY  ++ G   AG T
Sbjct: 608 EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A + F+++  +G + +V  Y +++    +   +  A  L +++    +  S      +
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I++  +    E+A E+++ +  SG  P+  TYGV+I  L   G +++A+ +F+SM ++ +
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P   + N +I    ++G   +A   L +++ K ++   ++ S  + +  + GK+ E   
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMK 847

Query: 547 LL 548
           LL
Sbjct: 848 LL 849



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 198/409 (48%), Gaps = 2/409 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R++  +I A+ K  + D A+  F +M   GV P   T+++++    +          F++
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQ 500

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNG 224
              + ++ +   +  +I+G C  G L KA E+++++   G   P++V + S+I+  CK+G
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  A  +F  + ++G      T+T LI G    G     F+  + M++ GV   + TY+
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+  Y   G++++G  LF EM+ + V  N VTY  ++ GL +  R   A +   +M  +
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +  V  Y  ++ G C     D+A  LF +L +     S+   N +I A  K    + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L   +   G+ P+E TY ++I + ++   +E A  M+S M+KSG  P       +I  
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           L  KG + +A    + +   ++       ++M+  + ++G  +  ++LL
Sbjct: 801 LLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 202/432 (46%), Gaps = 2/432 (0%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGI 180
           S +A   F  M   G +P   ++ +LL        F D   LF S     +  D   F I
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI    + G ++ A  +  ++++ G SP+VV Y+++I    + G +  A   F ++   G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEG 299
           +      Y  +I G   +G      E   +M   G+  P +  +N +I+  C +G+V + 
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             +FD +       +V+T+ +LI G C   ++ +A ++LD M++ G+  +++TY+ L+DG
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +   G  +    LF +++  G  P+ VTY +++    +AG +  A     EM E G T +
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              Y I++    R++  ++A  ++  +        +     +I+ +      +EA +LF 
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           ++  + L PN+  Y +MI    K+G    A  +   M + G+VP     +  I +L + G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 540 KWPEAEVLLNQM 551
           +  +A   L+++
Sbjct: 806 EIAKAGNYLSKV 817



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 164/360 (45%), Gaps = 40/360 (11%)

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           T HTY++L+    +      G   +  +   G+     T + L+   C   +  E   + 
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 304 DEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--ISPNVITYNKLIDG 359
              R  E+ C  NV +Y+ ++ GLC     Q A  L   M   G   SPNV+ YN +I G
Sbjct: 216 LH-RMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA--------------------- 398
           F   GET KA  LF+++   G  P VVTYN++I A  KA                     
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 399 --------------GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
                         G  K A+ + R+M+ RG+ P+ V     + S  +    ++A E++ 
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G  PD+ +Y  L+HG   +G   +   LFNSM    +  +  V+N++I  Y K G
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A+ +  EM ++G+ P++ +YS+ I    + G+  +A    NQM+  G++P+ ++Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 233/469 (49%), Gaps = 9/469 (1%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKSCSFDK 159
           N V   R +  +  A+ K+ L ++A+  FH+M+D     RS  +FNS+L  +I    + +
Sbjct: 107 NRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHR 166

Query: 160 GWLFF-----SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           G  F+     S     +  +  SF ++IK  C+ G +++A EV   + E    P+   Y 
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYC 226

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +L+DG CK   I+ A +L  ++   G   +   Y VLI GL K G      +  + M L 
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+  TYN LIH  C +GK+ +   L + M   +   N VTY TLI GL K+ R  + 
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDG 346

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            RLL  M+  G   N   Y+ LI G    G+ ++A  L+ ++   G  P++V Y+ +I  
Sbjct: 347 ARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDG 406

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             + G    A +++  M   G  P+  TY+ L+  F ++   E+A +++  M ++G S +
Sbjct: 407 LCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRN 466

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
            + Y VLI GLC  G +KEA  +++ M    ++P+ V Y+ MI G C  G+   AL+L  
Sbjct: 467 EFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYH 526

Query: 515 EM---NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           EM    E    P++ +Y+  +  LC       A  LLN ML  G  P V
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDV 575



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 178/384 (46%), Gaps = 42/384 (10%)

Query: 227 ERAKMLF-RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE-----KMQLNGVSPSL 280
           E+A  LF R + E     +  ++  ++  +   GL   G EFY+      M +N +SP+ 
Sbjct: 129 EKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNG 187

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            ++N +I   C  G V    ++F  M  ++   +  TY TL+ GLCKE R+ EA  LLD+
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G SP+ + YN LIDG C  G+  +  +L + +   G  P+ VTYN LI      G 
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGK 307

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L+  M      P++VTY  LI+  V+         +   M++ G+  + + Y V
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSV 367

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GL  +G  +EA  L+  M E    PN VVY+ +I G C+EG    A  +L  M   G
Sbjct: 368 LISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG 427

Query: 521 LVPNIASYSS-----------------------------------TIGVLCQDGKWPEAE 545
            +PN+ +YSS                                    I  LC  G+  EA 
Sbjct: 428 CLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAM 487

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
           ++ ++ML +G+KP    Y+ + + 
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSMIKG 511



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 176/361 (48%), Gaps = 5/361 (1%)

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           +S+I+     GD    + L  +I     V  + ++ V+     K  L +   + + +M  
Sbjct: 81  SSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVD 140

Query: 274 N-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV----VTYNTLICGLCKE 328
                 S+ ++N +++   NEG    G + +D + +  +  N+    +++N +I  LCK 
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             V  A  +   M      P+  TY  L+DG C     D+A  L ++++S G SPS V Y
Sbjct: 201 GFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           NVLI    K G+    + LV  M  +G  P+EVTY  LI        ++KA  +   M  
Sbjct: 261 NVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           S   P+  TYG LI+GL  +    + ++L  SM E     N  +Y+++I G  KEG +  
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEE 380

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A+ L  +M EKG  PNI  YS+ I  LC++GK  EA+ +LN M+  G  P+V  Y+ L +
Sbjct: 381 AMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMK 440

Query: 569 A 569
            
Sbjct: 441 G 441



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 195/437 (44%), Gaps = 31/437 (7%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCH---LTQLFPSSSNPVTKSRLY 109
           LLL +M S   + +  +   +I G       +  + L     L   FP   N VT + L 
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFP---NEVTYNTLI 299

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSENR 168
             +    LK +L D+A+    +M+ S   P   T+ +L+  ++K   + D   L  S   
Sbjct: 300 HGLC---LKGKL-DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEE 355

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
               L+ + + +LI G  + G   +A  +  ++ E G  PN+V+Y+++IDG C+ G    
Sbjct: 356 RGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNE 415

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           AK +   +   G +   +TY+ L+ G FK GL ++  + + +M   G S + + Y+ LI 
Sbjct: 416 AKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLID 475

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM---KMAG 345
             C  G+V E   ++ +M    +  + V Y+++I GLC    +  A +L  +M   +   
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPK 535

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+V+TYN L+DG C   +  +A  L N +   G  P V+T N  +   S+  +S    
Sbjct: 536 SQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDS--CE 593

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +    +EE            L+   ++   +  A ++  +M     +P   T+ +++  +
Sbjct: 594 EGRSFLEE------------LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEI 641

Query: 466 CMKGNMKEASKLFNSMW 482
           C    +  A    N  W
Sbjct: 642 CKPKKINAA---INKCW 655


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 275/579 (47%), Gaps = 19/579 (3%)

Query: 4   SKQGEGQ---ALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           +K G G+   +L   ++SR   +  +   +L +W  +QG       +   LR  LS   S
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG---KTDEVKDTLRFALSDNLS 376

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
            +      LI  +        +     +L  + +    S N VT    + S+I+  +K  
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEA---EQVLLEMEEK-SISPNVVT----FSSVINGFVKRG 428

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           L D+A  Y   M + G+ P   T+ +L+    K    D     + +  C+ V+++ +   
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G  + G + +A  +       G S + V YT+LIDG  K GD+  A    +++ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            ++     Y V I  L   G  K+   F  +M+  G+ P   TYN +I  +C +G+ ++ 
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL  EM+   +  N++TYNTL+ GL     V++A+ LL++M  AG SP+ +T+ +++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
              +   D    +   + + G    +  YN L++     G ++ A+ ++ EM   GI P 
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +T+  LI    +S  ++ AF  Y+ M     SP++ T+  L+ GL   G + EA  +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M ++ LEPN++ Y+++  G+ K+ N   A+RL  EM  KG VP +++Y++ I    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILY----RAKNNIE 574
              +A+ L   M K G+ P+   Y+IL     R +N  E
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTE 887



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 200/396 (50%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           + +DV  +  L+ G C AG ++ A  VL+ ++E G  PNV  YT  I   C+   +E A 
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L+  +   G++    T + L+ GL ++G   + +  + +M   G +P+  TY  LI   
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G+  E   L  EM  R V  ++VTY  L+  L K+ +  E +  L       +SPN 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TY  LID  C A   D+A ++  +++    SP+VVT++ +I  F K G    A++  R 
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+ERGI P+ VTY  LID F +    + A E+Y  M   G   + +    L++GL   G 
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           ++EA  LF     + L  + V Y  +I G  K G+   A +   E+ ++ ++P+   Y+ 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  LC  GK+ EA+  L +M  +GLKP  S YN +
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 160/360 (44%), Gaps = 6/360 (1%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P  V Y  L+       D   A  +  ++ + G+     T   L+ GL +NG  +     
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNG--QVDAAA 155

Query: 268 YEKMQLNGVSPSLYTYNCL-IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
               +  G++P + +   L + +    G       + D M  + +  +VV YNTL+ G C
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  +V  A  +LD MK AG+ PNV TY   I  +C     ++AF L+  +  NG    VV
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T + L+    + G    A  L REM++ G  P+ VTY  LIDS  ++   ++   +   M
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G   D+ TY  L+  L  +G   E            L PN V Y ++I   CK  N 
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A ++L EM EK + PN+ ++SS I    + G   +A      M + G+ P+V  Y  L
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 142/296 (47%), Gaps = 12/296 (4%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   YN L+    +         +  EM  R V  + VT NTL+ GLC+  +V  A  L
Sbjct: 101 PTTVAYNILLAALSDHAHAP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 338 LDQMKMAGISPNVITYNKL----IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
               +  GI+P + +   L    I GF   G+T  A  + +++ + G    VV YN L+ 
Sbjct: 158 --ADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            F +AG    A  ++  M+E G+ P+  TYT  I  + R+  +E+AF++Y  M ++G   
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           DV T   L+ GLC  G   EA  LF  M +    PN V Y  +I    K G     L LL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           GEM  +G+V ++ +Y++ +  L + GK  E +  L   L   L P+   Y +L  A
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 271/567 (47%), Gaps = 15/567 (2%)

Query: 4   SKQGEGQ---ALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           +K G G+   +L   ++SR   +  +   +L +W  +QG       +   LR  LS   S
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG---KTDEVKDTLRFALSDNLS 376

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
            +      LI  +        +     +L  + +    S N VT    + S+I+  +K  
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEA---EQVLLEMEEK-SISPNVVT----FSSVINGFVKRG 428

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           L D+A  Y   M + G+ P   T+ +L+    K    D     + +  C+ V+++ +   
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G  + G + +A  +       G S + V YT+LIDG  K GD+  A    +++ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            ++     Y V I  L   G  K+   F  +M+  G+ P   TYN +I  +C +G+ ++ 
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL  EM+   +  N++TYNTL+ GL     V++A+ LL++M  AG SP+ +T+ +++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
              +   D    +   + + G    +  YN L++     G ++ A+ ++ EM   GI P 
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +T+  LI    +S  ++ AF  Y+ M     SP++ T+  L+ GL   G + EA  +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M ++ LEPN++ Y+++  G+ K+ N   A+RL  EM  KG VP +++Y++ I    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +A+ L   M K G+ P+   Y+IL
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDIL 875



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 234/519 (45%), Gaps = 49/519 (9%)

Query: 90  CHLTQLFPS-----SSNPVTKSRLYESIIDAHLKSRLSDQALF--YFHQMLDSGVRPRSN 142
           C L  L P+     SS P T +  Y  ++ A     LSD A       +M   GV     
Sbjct: 84  CRLRLLRPAIALLRSSRPTTVA--YNILLAA-----LSDHAHAPAVLAEMCKRGVPFDGV 136

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N+LL  + ++   D              LDV  +  LI G C  GD   A  V +++ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G   +VV Y +L+ G C+ G ++ A+ +   + E G+     TYT  I    +    +
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + F+ YE M  NGV   + T + L+   C +G+ SE + LF EM     A N VTY TLI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 323 CGLCKEMRVQEAERLLDQMKMAGI-----------------------------------S 347
             L K  R +E   LL +M   G+                                   S
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY  LID  C A   D+A ++  +++    SP+VVT++ +I  F K G    A++ 
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M+ERGI P+ VTY  LID F +    + A E+Y  M   G   + +    L++GL  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA  LF     + L  + V Y  +I G  K G+   A +   E+ ++ ++P+   
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I  LC  GK+ EA+  L +M  +GLKP  S YN +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   YN L+    +         +  EM  R V  + VT NTL+ GLC+  +V  A  L
Sbjct: 101 PTTVAYNILLAALSDHAHAP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 338 LDQMKMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            D  +  GI   +VI +N LI G+C  G+T  A  + +++ + G    VV YN L+  F 
Sbjct: 158 AD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           +AG    A  ++  M+E G+ P+  TYT  I  + R+  +E+AF++Y  M ++G   DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T   L+ GLC  G   EA  LF  M +    PN V Y  +I    K G     L LLGEM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +G+V ++ +Y++ +  L + GK  E +  L   L   L P+   Y +L  A
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 25/271 (9%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           A+ L+ +++S   + SS T R +L              ++SR  + I+D H         
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVL-----------QACSQSRRLDVILDIH--------- 682

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKG 184
                 M+++G+      +N+LL  +       K  +   E     +  D  +F  LI G
Sbjct: 683 ----EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG 738

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C++  L+ AF    Q+     SPN+  + +L+ G    G I  A  +  ++ + GL   
Sbjct: 739 HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN 798

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY +L  G  K   + +    Y +M   G  P + TYN LI ++   G +++  +LF 
Sbjct: 799 NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           +M+ R V     TY+ L+ G     R Q+++
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWYDLAREQKSQ 889



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 36/297 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I +H +   + +AL   H+M  S ++P   T+N+L+  +  + + +K     +E  
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 167 ---------------------NRCKVELDVYS-------------FGILIKGCCEAGDLN 192
                                 R  V LD++              +  L++  C  G   
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           KA  VL ++   G +P+ + + +LI G CK+  ++ A   + ++    +     T+  L+
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL   G   +      +M+ +G+ P+  TY+ L   +  +    E  +L+ EM  +   
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
             V TYN LI    K   + +A+ L   M+  G+ P   TY+ L+ G+ D     K+
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 242/527 (45%), Gaps = 71/527 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L+ + I+A  K    ++A+  F +M ++GV P   T+N+++  +  S  +D+ ++F  + 
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID-------- 218
             + VE  + ++ IL+KG  +A  +  A+ VL ++ E GF PNV++Y +LID        
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSL 373

Query: 219 ---------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                      G CK+G  + A+ L +++  +G    Q ++T +
Sbjct: 374 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSV 433

Query: 252 IC-----------------------------------GLFKNGLQKDGFEFYEKMQLNGV 276
           IC                                   GL K+G      E + K    G 
Sbjct: 434 ICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF 493

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                T N L+H  C  GK+ EGF++  E+  R    + V+YNTLI G C   ++ EA  
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            +D+M   G+ P+  TY+ LI G  +  + ++A + +   K NG  P V TY+V+I    
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCC 613

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           KA  ++    L  EM    + P+ V Y  LI ++ RS  +  A E+   M+  G SP+  
Sbjct: 614 KAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI G+ +   ++EA  L   M    LEPN   Y  +I GY K G   +   LL EM
Sbjct: 674 TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 733

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + K + PN  +Y+  IG   +DG   EA  LL++M + G+ P    Y
Sbjct: 734 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 226/503 (44%), Gaps = 72/503 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID    S   D+A  +  +M++ GV P   T++ L+  + K+      +    E  
Sbjct: 290 YNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT 349

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    +V  +  LI    EAG LNKA E+ + +   G S     Y +LI G CK+G  +
Sbjct: 350 EKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQAD 409

Query: 228 RAKMLFRKIGELGLVATQHTYTVLIC---------------------------------- 253
            A+ L +++  +G    Q ++T +IC                                  
Sbjct: 410 IAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLI 469

Query: 254 -GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            GL K+G      E + K    G      T N L+H  C  GK+ EGF++  E+  R   
Sbjct: 470 SGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFV 529

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQM------------------------------- 341
            + V+YNTLI G C   ++ EA   +D+M                               
Sbjct: 530 MDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQF 589

Query: 342 ----KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
               K  G+ P+V TY+ +IDG C A  T++  +LF+++ SN   P+ V YN LI A+ +
Sbjct: 590 WGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCR 649

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +G   MA +L  +M+ +GI+P+  TYT LI        +E+A  +   M+  G  P+V+ 
Sbjct: 650 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFH 709

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G    G M +   L   M    + PN + Y +MI GY ++GN   A RLL EM 
Sbjct: 710 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR 769

Query: 518 EKGLVPNIASYSSTI-GVLCQDG 539
           EKG+VP+  +Y   I G L Q G
Sbjct: 770 EKGIVPDSITYKEFIYGYLKQGG 792



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 226/512 (44%), Gaps = 70/512 (13%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           AL  F  + + G+ P   T N LL  ++++  F K    F      V  DVY F   I  
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINA 261

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+ G + +A E+ +++EE G  PNVV Y ++IDG   +G  + A M   K+ E G+  T
Sbjct: 262 FCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPT 321

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY++L+ GL K     D +   ++M   G  P++  YN LI      G +++  ++ D
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKD 381

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG------------------- 345
            M  + ++    TYNTLI G CK  +   AERLL +M   G                   
Sbjct: 382 LMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHH 441

Query: 346 ----------------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
                           +SP       LI G C  G+  KA  L+ +  + G      T N
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEV---------------------------- 421
            L+    +AG  +    + +E+  RG     V                            
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561

Query: 422 -------TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                  TY+ILI   +  + +E+A + +   +++G  PDVYTY V+I G C     +E 
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            KLF+ M    L+PN VVYN +I  YC+ G    AL L  +M  KG+ PN A+Y+S I  
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +    +  EA++LL +M   GL+P+V  Y  L
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTAL 713



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 9/422 (2%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S  Y ++I  + KS  +D A     +ML  G      +F S++  +     FD    F  
Sbjct: 392 SSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVG 451

Query: 166 ENRCKVELDVYSFG-----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           E    + L   S G      LI G C+ G  +KA E+  +    GF  +     +L+ G 
Sbjct: 452 E----MLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ G +E    + ++I   G V  + +Y  LI G   N    + F F ++M   G+ P  
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY+ LI    N  KV E  + + + +   +  +V TY+ +I G CK  R +E ++L D+
Sbjct: 568 YTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDE 627

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M    + PN + YN LI  +C +G    A  L   +K  G SP+  TY  LI+  S    
Sbjct: 628 MMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 687

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  L+ EM   G+ P+   YT LID + +   M K   +   M      P+  TY V
Sbjct: 688 VEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 747

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G    GN+ EAS+L + M E  + P+ + Y   I+GY K+G   +A +   E N   
Sbjct: 748 MIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDEENYAA 807

Query: 521 LV 522
           ++
Sbjct: 808 II 809


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 275/579 (47%), Gaps = 19/579 (3%)

Query: 4   SKQGEGQ---ALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           +K G G+   +L   ++SR   +  +   +L +W  +QG       +   LR  LS   S
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG---KTDEVKDTLRFALSDNLS 376

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
            +      LI  +        +     +L  + +    S N VT    + S+I+  +K  
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEA---EQVLLEMEEK-SISPNVVT----FSSVINGFVKRG 428

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           L D+A  Y   M + G+ P   T+ +L+    K    D     + +  C+ V+++ +   
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G  + G + +A  +       G S + V YT+LIDG  K GD+  A    +++ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            ++     Y V I  L   G  K+   F  +M+  G+ P   TYN +I  +C +G+ ++ 
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL  EM+   +  N++TYNTL+ GL     V++A+ LL++M  AG SP+ +T+ +++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
              +   D    +   + + G    +  YN L++     G ++ A+ ++ EM   GI P 
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +T+  LI    +S  ++ AF  Y+ M     SP++ T+  L+ GL   G + EA  +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M ++ LEPN++ Y+++  G+ K+ N   A+RL  EM  KG VP +++Y++ I    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILY----RAKNNIE 574
              +A+ L   M K G+ P+   Y+IL     R +N  E
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTE 887



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 234/519 (45%), Gaps = 49/519 (9%)

Query: 90  CHLTQLFPS-----SSNPVTKSRLYESIIDAHLKSRLSDQA--LFYFHQMLDSGVRPRSN 142
           C L  L P+     SS P T +  Y  ++ A     LSD A       +M   GV     
Sbjct: 84  CRLRLLRPAIALLRSSRPTTVA--YNILLAA-----LSDHAHAPAVLAEMCKRGVPFDGV 136

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N+LL  + ++   D              LDV  +  LI G C  GD   A  V +++ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G   +VV Y +L+ G C+ G ++ A+ +   + E G+     TYT  I    +    +
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + F+ YE M  NGV   + T + L+   C +G+ SE + LF EM     A N VTY TLI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 323 CGLCKEMRVQEAERLLDQMKMAGI-----------------------------------S 347
             L K  R +E   LL +M   G+                                   S
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TY  LID  C A   D+A ++  +++    SP+VVT++ +I  F K G    A++ 
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M+ERGI P+ VTY  LID F +    + A E+Y  M   G   + +    L++GL  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA  LF     + L  + V Y  +I G  K G+   A +   E+ ++ ++P+   
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I  LC  GK+ EA+  L +M  +GLKP  S YN +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   YN L+    +         +  EM  R V  + VT NTL+ GLC+  +V  A  L
Sbjct: 101 PTTVAYNILLAALSDHAHAP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 338 LDQMKMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            D  +  GI   +VI +N LI G+C  G+T  A  + +++ + G    VV YN L+  F 
Sbjct: 158 AD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           +AG    A  ++  M+E G+ P+  TYT  I  + R+  +E+AF++Y  M ++G   DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T   L+ GLC  G   EA  LF  M +    PN V Y  +I    K G     L LLGEM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +G+V ++ +Y++ +  L + GK  E +  L   L   L P+   Y +L  A
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 275/579 (47%), Gaps = 19/579 (3%)

Query: 4   SKQGEGQ---ALTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSS 60
           +K G G+   +L   ++SR   +  +   +L +W  +QG       +   LR  LS   S
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG---KTDEVKDTLRFALSDNLS 376

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
            +      LI  +        +     +L  + +    S N VT    + S+I+  +K  
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEA---EQVLLEMEEK-SISPNVVT----FSSVINGFVKRG 428

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           L D+A  Y   M + G+ P   T+ +L+    K    D     + +  C+ VE++ +   
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G  + G + +A  +       G S + V YT+LIDG  K GD+  A    +++ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            ++     Y V I  L   G  K+      +M+  G+ P   TYN +I  +C +G+ ++ 
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL  EM+   +  N++TYNTL+ GL     V++A+ LL++M  AG SP+ +T+ +++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
              +   D    +   + + G    +  YN L++     G ++ A+ ++ EM   GI P 
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +T+  LI    +S  ++ AF  Y+ M     SP++ T+  L+ GL   G + EA  +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M ++ LEPN++ Y++++ G+ K+ N   A+RL  EM  KG VP +++Y++ I    + G
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILY----RAKNNIE 574
              +A+ L   M K G+ P+   Y+IL     R +N  E
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTE 887



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 233/519 (44%), Gaps = 49/519 (9%)

Query: 90  CHLTQLFPS-----SSNPVTKSRLYESIIDAHLKSRLSDQA--LFYFHQMLDSGVRPRSN 142
           C L  L P+     SS P T +  Y  ++ A     LSD A       +M   GV     
Sbjct: 84  CRLRLLRPAIALLRSSRPTTVA--YNILLAA-----LSDHAHAPAVLAEMCKRGVPFDGV 136

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           T N+LL  + ++   D              LDV  +  LI G C  GD   A  V +++ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G   +VV Y +L+ G C+ G ++ A+ +   + E G+     TYT  I    +    +
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + F+ YE M  NGV   + T + L+   C +G+ SE + LF EM       N VTY TLI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLI 316

Query: 323 CGLCKEMRVQEAERLLDQMKMAGI-----------------------------------S 347
             L K  R +E   LL +M   G+                                   S
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N +TY  LID  C A   D+A ++  +++    SP+VVT++ +I  F K G    A++ 
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M+ERGI P+ VTY  LID F +    + A E+Y  M   G   + +    L++GL  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++EA  LF     + L  + V Y  +I G  K G+   A +   E+ ++ ++P+   
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I  LC  GK+ EA+ +L +M  +GLKP  S YN +
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTM 595



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 10/291 (3%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   YN L+    +         +  EM  R V  + VT NTL+ GLC+  +V  A  L
Sbjct: 101 PTTVAYNILLAALSDHAHAP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 338 LDQMKMAGISP-NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            D  +  GI   +VI +N LI G+C  G+T  A  + +++ + G    VV YN L+  F 
Sbjct: 158 AD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           +AG    A  ++  M+E G+ P+  TYT  I  + R+  +E+AF++Y  M ++G   DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T   L+ GLC  G   EA  LF  M +    PN V Y  +I    K G     L LLGEM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
             +G+V ++ +Y++ +  L + GK  E    +   L+  L  ++SL  + Y
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDE----VKDTLRFALSDNLSLNGVTY 382


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 257/571 (45%), Gaps = 101/571 (17%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           P++  PV    LY  ++++ L+    D   + +  M+ +GV P + T N L+  +  S  
Sbjct: 110 PANPPPVY---LYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGR 166

Query: 157 FDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           F+     F +   K    + +SFGIL++G C AG   +A E+L+ +   G  PN VIY +
Sbjct: 167 FEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNT 226

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN- 274
           LI   C+ G  E A+ L  ++ E GL     T+   I  L   G   +    +  MQ++ 
Sbjct: 227 LISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDE 286

Query: 275 --GVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             G+  P++ T+N ++  +C EG + E   L + M+       + +YN  + GL +  ++
Sbjct: 287 ELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKL 346

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA+  L +M   GI PN+ ++N ++DG C  G    A  +   + S+G  P  VTY+ L
Sbjct: 347 LEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTL 406

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPS-------------------------------- 419
           +      G    A++++ EM  RG +P+                                
Sbjct: 407 LHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSY 466

Query: 420 ---EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS-----------------------P 453
               VT  I+ID   +S  +++A E+   M   G +                       P
Sbjct: 467 DLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLP 526

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG---NSYRAL 510
           D+ TY ++I+GLC  G + EA K F  M    L P+ ++Y+  I  +CK G   +++R L
Sbjct: 527 DLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVL 586

Query: 511 R--------------------------------LLGEMNEKGLVPNIASYSSTIGVLCQD 538
           +                                LL +M EKG+ PNI +Y++ I  LC+ 
Sbjct: 587 KDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEG 646

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+  +A  LL++ML+ G+ P++S + +L +A
Sbjct: 647 GRIKDATSLLDEMLQKGISPNISSFRLLIKA 677



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 216/457 (47%), Gaps = 27/457 (5%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILI 182
           +A     +M+D G+ P   +FN+++  + K+       +         +  D  ++  L+
Sbjct: 348 EAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            GCC  G + KA  +L+++   G SPN      L+    K G I  A+ L +K+ E    
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-----------------------PS 279
               T  ++I GL K+G   +  E  E M ++G +                       P 
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPD 527

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           L TY+ +I+  C  G++ E  K F EM  + +  + + Y+T I   CK  ++  A R+L 
Sbjct: 528 LITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLK 587

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M+  G + ++ TYN LI G     +  + + L + +K  G +P++ TYN +I    + G
Sbjct: 588 DMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGG 647

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL-MQKSGFSPDVYTY 458
             K A+ L+ EM ++GI+P+  ++ +LI +F ++ D     E++ + +   G    +Y+ 
Sbjct: 648 RIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYS- 706

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            ++ + L + G + EA +LF++  +   +  +  YN +I   CK+     A  +L +M +
Sbjct: 707 -LMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMID 765

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           KG   + AS+   I  L + GK  +A+ L  +M+ + 
Sbjct: 766 KGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMA 802



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 207/446 (46%), Gaps = 34/446 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           + +++D   K+ L   A      M+ SG+ P + T+++LL     +    K      E  
Sbjct: 368 FNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMM 427

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R     + Y+  IL+    + G + +A ++L ++ E  +  + V    +IDG CK+G ++
Sbjct: 428 RRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLD 487

Query: 228 RAKMLFR--------KIGELG-----LVATQH----------TYTVLICGLFKNGLQKDG 264
            A  +           +G LG     LV +            TY+++I GL K G   + 
Sbjct: 488 EAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEA 547

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + +M    + P    Y+  IH +C  GK+S  F++  +M  R    ++ TYN+LI G
Sbjct: 548 RKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILG 607

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L  + ++ E   LLD MK  GI+PN+ TYN +I   C+ G    A  L +++   G SP+
Sbjct: 608 LGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPN 667

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGIT---PSEVTYTILIDSFVRSDDMEKAFE 441
           + ++ +LI+AF KA +      +V+E+ E  ++     E  Y+++ +  +   ++ +A E
Sbjct: 668 ISSFRLLIKAFCKASD----FGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKE 723

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++       F    + Y  LI  LC    ++ AS + + M +     +   +  +I G  
Sbjct: 724 LFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLG 783

Query: 502 KEGNSYRALRL---LGEMNEKGLVPN 524
           K G  + A  L   + +M  +G+V N
Sbjct: 784 KRGKKHDADELAERMMDMASEGMVEN 809


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 263/568 (46%), Gaps = 51/568 (8%)

Query: 28  AFSLFNWASRQ---GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           AF+L+ +   Q   GL+HT +S+  ++ +L+    ++        +++ I G +      
Sbjct: 107 AFALYFFRLSQCCSGLEHTIRSLCRLIHILVYGKRNYRVMDLILFLVRNIGGAVGEEE-- 164

Query: 85  PRSLLCHLTQLFPSSSNPVTKS--RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
               LC L       +   TK    +Y  ++D ++       AL   H++    + P   
Sbjct: 165 ----LCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMG 220

Query: 143 TFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
             NSLL  +++S   D  W +        + L+     + I+  C  G++   +++L ++
Sbjct: 221 VCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEM 280

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ---------------- 245
           +  G   +V+ YT +ID  CK   ++ A  L  K+   G+                    
Sbjct: 281 KNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRS 340

Query: 246 ----------------HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
                             Y+  +  L K+G   +  + +++M   G+ P  + Y  +I  
Sbjct: 341 DKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGG 400

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  G +++ F+   EM    +  +V TY  LI   CK   +  AE LL +M + G+ P+
Sbjct: 401 YCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPD 460

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+T+N LIDGF   G   KAF L + ++S G SP  VTYN LI +    G    A D++ 
Sbjct: 461 VVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILH 520

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E+  RG++P  +T+T +ID F +  + E+AF ++S M +    PDV T   L++G C   
Sbjct: 521 ELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRAR 580

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            M EA+ LF  M +  L+P+ V+YN +I G+C  GN   A  L+  M + G +PNI ++ 
Sbjct: 581 RMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHR 640

Query: 530 STIGVLCQDGKW---PE--AEVLLNQML 552
           +    L  + KW   PE  A + L Q+L
Sbjct: 641 AF--ALGFEKKWVKNPELHASLKLKQIL 666



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 3/253 (1%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            Y+ L+     E +V  A  L+ ++K+  I P++   N L+     + + D A+ +   +
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +S G   +    ++ I ++   GN +    ++ EM+  GI    + YTI+ID+  +   +
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           + A  +   M   G S D  +   +I G C KG   +A  L N      + PN  VY+  
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFF---NVRPNIFVYSSF 362

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   CK+GN   A +   EM+E GL P+   Y+  IG  C+ G   +A   L +MLK G+
Sbjct: 363 MTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGI 422

Query: 557 KPSVSLYNILYRA 569
            PSV+ Y +L  A
Sbjct: 423 TPSVTTYTLLINA 435


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 198/385 (51%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +LD  S+G LI G C+ G+   A +++  LEE    P+VV+Y  +ID  CKN  +  A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+ ++    +     TYT LI G    G   +      +M+L  ++P +YT++ LI    
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK+     +   M    V  +VVTYN+L+ G      V+ A+ + + M  +G++P V 
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y  +IDG C     D+A  LF ++K     P+ +T+N LI    K+G      DLV +M
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +R      +TY+ LID+  ++  +++A  ++  M      PD+YTY +LI GLC  G +
Sbjct: 411 RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRL 470

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           K A ++F  +       +   Y +MI G+CK G    AL LL +M + G +PN  ++   
Sbjct: 471 KIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDII 530

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  L +  +  +AE LL +M+  GL
Sbjct: 531 ICALFEKDENDKAEKLLREMIARGL 555



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 172/345 (49%), Gaps = 1/345 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y  IID+  K++L  +A   + +M    + P   T+ +L+  F I  C  +   L    
Sbjct: 211 MYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEM 270

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  DVY+F ILI    + G +  A  VL  + +    P+VV Y SL+DG     ++
Sbjct: 271 KLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEV 330

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + AK +F  + + G+     +YT++I GL K  +  +    +E+M+   V P+  T+N L
Sbjct: 331 KHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSL 390

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C  G+++  + L D+MR R    +V+TY++LI  LCK   + +A  L  +M    I
Sbjct: 391 IDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEI 450

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P++ TY  LIDG C  G    A  +F  L   G    + TY V+I  F KAG    A  
Sbjct: 451 QPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALA 510

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           L+ +ME+ G  P+ +T+ I+I +    D+ +KA ++   M   G 
Sbjct: 511 LLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 171/362 (47%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D N A  + N++  M   P    + +++    K      A  L + +   G+ +   T  
Sbjct: 49  DHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLN 108

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI      G     F     +   G  P + T   LI   C  G+V +  K  D++   
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           E   + ++Y TLI GLCK    + A +L+  ++   I P+V+ YN +ID  C      +A
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L++++ +    P+VVTY  LI  F   G    A  L+ EM+ + I P   T++ILID+
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   M+ A  + ++M K+   PDV TY  L+ G  +   +K A  +FNSM ++ + P 
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
              Y +MI G CK      A+ L  EM  K ++PN  +++S I  LC+ G+      L++
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 550 QM 551
           +M
Sbjct: 409 KM 410


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 234/470 (49%), Gaps = 8/470 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
            P   +  T + +   + D   + R+ D AL     ML  G +P   T+  LL  V KS 
Sbjct: 135 MPVPPDAYTYTPIIRGLCD---RGRVGD-ALALLDDMLQRGCQPSVVTYTVLLEAVCKSS 190

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            F +      E R K    ++ ++ ++I G C  G ++ A E+LN+L   GF P++V YT
Sbjct: 191 GFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYT 250

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +++ G C     +  K+LF ++ +   V  + T+ +L+    + G+ +   +  ++M  +
Sbjct: 251 TVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQH 310

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G +P+    N +I+  C +G+V + +   + M       + ++Y T++ GLC+  R + A
Sbjct: 311 GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHA 370

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + LL +M      PN +T+N  I   C  G  ++A +L   +   G S  +VTYN L+  
Sbjct: 371 KELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHG 430

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G    A +L   +      P+ +TYT L+     ++ ++ A E+ + M +     +
Sbjct: 431 FCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLN 487

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T+ VL+   C KG ++EA +L N M E    PN + +N ++ G  K+ NS  AL LL 
Sbjct: 488 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 547

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            +  KG+  +  +YSS + VL ++ +  EA  +L+ +  +G++P V +YN
Sbjct: 548 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 193/393 (49%), Gaps = 6/393 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G   +V  Y +L+ G C+ G ++ A+   
Sbjct: 73  DVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAAR--- 129

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I  + +    +TYT +I GL   G   D     + M   G  PS+ TY  L+   C  
Sbjct: 130 RLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKS 189

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               E   + DEMR +    N+VTYN +I G+C+E RV +A+ +L+++   G  P++++Y
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             ++ G C A   D    LF ++      P+ VT+++L+R F + G  + A  ++++M +
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G TP+     I+I++  +   ++ A++  + M   G +PD  +Y  ++ GLC  G  + 
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M      PN+V +N  I   C++G   +A++L+  M E G    I +Y++ + 
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 429

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C  G+   A  L N    L  +P+   Y  L
Sbjct: 430 GFCVQGRVDSALELFNN---LPCEPNTITYTTL 459



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     +R  D     F +M+D    P   TF+ L+ F  +    ++        S
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           ++ C     + +  I+I   C+ G ++ A++ LN +   G +P+ + YT+++ G C+ G 
Sbjct: 309 QHGCTPNTTLCN--IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L  ++        + T+   IC L + GL +   +  E M   G S  + TYN 
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 426

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H +C +G+V    +LF+ +       N +TY TL+ GLC   R+  A  LL  M    
Sbjct: 427 LVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAGMIQKD 483

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              N +T+N L+  FC  G  ++A  L NQ+  +G +P+++T+N L+   +K  NS+ A 
Sbjct: 484 CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEAL 543

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +  +G++   +TY+ ++D   R D  E+A +M   +Q  G  P V  Y  ++  L
Sbjct: 544 ELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFAL 603

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C +    +A   F  M      PN+  Y ++I G   EG    A  +L E+  KG++
Sbjct: 604 CKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 3/377 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DL +A  ++      G +P+V + T LI   C+ G    A  + R     G       Y 
Sbjct: 54  DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G           M    V P  YTY  +I   C+ G+V +   L D+M  R
Sbjct: 114 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +VVTY  L+  +CK     EA  +LD+M+  G +PN++TYN +I+G C  G  D A
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             + N+L S G  P +V+Y  +++    A        L  EM ++   P+EVT+ +L+  
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F R   +E+A ++   M + G +P+     ++I+ +C +G + +A    N+M      P+
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y  ++ G C+ G    A  LL EM  K   PN  ++++ I +LCQ G   +A  L+ 
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 550 QMLKLGLKPSVSLYNIL 566
            M + G    +  YN L
Sbjct: 411 LMPEYGCSVGIVTYNAL 427



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 202/429 (47%), Gaps = 41/429 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +DV+++  L+ G C  G L+ A  +   +  M   P+   YT +I G C  G +  A  L
Sbjct: 107 VDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALAL 163

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
              + + G   +  TYTVL+  + K+    +     ++M+  G +P++ TYN +I+  C 
Sbjct: 164 LDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 223

Query: 293 EGKVSE-----------GFK------------------------LFDEMRHREVACNVVT 317
           EG+V +           GF+                        LF EM  ++   N VT
Sbjct: 224 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 283

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           ++ L+   C+   V+ A ++L QM   G +PN    N +I+  C  G  D A+   N + 
Sbjct: 284 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 343

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G +P  ++Y  ++R   +AG  + A +L+ EM  +   P+EVT+   I    +   +E
Sbjct: 344 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 403

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A ++  LM + G S  + TY  L+HG C++G +  A +LFN++     EPN + Y  ++
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLL 460

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G C       A  LL  M +K    N  +++  +   CQ G   EA  L+NQM++ G  
Sbjct: 461 TGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 520

Query: 558 PSVSLYNIL 566
           P++  +N L
Sbjct: 521 PNLITFNTL 529



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 3/295 (1%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G +P +Y    LI   C  G+ S+  ++           +V  YNTL+ G C+  R+  A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            RL+  M    + P+  TY  +I G CD G    A  L + +   G  PSVVTY VL+ A
Sbjct: 129 RRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K+     A +++ EM  +G TP+ VTY ++I+   R   ++ A E+ + +   GF PD
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           + +Y  ++ GLC      +   LF  M + K  PN+V ++M++  +C+ G   RA+++L 
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +M++ G  PN    +  I  +C+ G+  +A   LN M   G  P    Y  + R 
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 3/238 (1%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           + EA RL++     G +P+V    KLI   C  G T  A R+    +++G    V  YN 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  + + G    A  L+  M    + P   TYT +I        +  A  +   M + G
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             P V TY VL+  +C      EA  + + M      PN V YN++I G C+EG    A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            +L  ++  G  P+I SY++ +  LC   +W + +VL  +M+     P+   +++L R
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 289



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +  DD+ +A  +       G +PDVY    LI  LC +G   +A+++  +  E    P 
Sbjct: 49  LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTA-EASGAPV 107

Query: 490 DV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           DV  YN ++ GYC+ G    A RL+  M    + P+  +Y+  I  LC  G+  +A  LL
Sbjct: 108 DVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALL 164

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           + ML+ G +PSV  Y +L  A
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEA 185


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 264/556 (47%), Gaps = 18/556 (3%)

Query: 25  PLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +A   F  A+R+  + HT  S + +L L    M  H        +  ++  +I  ++ 
Sbjct: 105 PAEALERFRSAARKPRVAHTTASCNYMLEL----MRGHGRVGDMAEVFDVMQRQIVKANV 160

Query: 84  -TPRSLLCHLTQLFPSSSNPVTKSRLYES--IIDAH---------LKSRLSDQALFYFHQ 131
            T  ++   L       S PV    + E+  +++A+         +KS    +AL  +  
Sbjct: 161 GTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRV 220

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M+  GV P   T++ L++   K    +   WL        V+ +VYS+ I I+   +A  
Sbjct: 221 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 280

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            ++A+ +L ++E  G  P+V+ +T LI   C  G I  AK +F K+ +      + TY  
Sbjct: 281 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 340

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+     NG  +   E +  M+ +G + ++  Y  +I   C  G+V E  ++FDEM+ + 
Sbjct: 341 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 400

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +     +YN+LI G  K  R  +A  L   M + G  PN  T+   I+ +  +GE+ KA 
Sbjct: 401 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAI 460

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + +  +KS G  P VV  N ++   +K+G   MA  +  E++  G++P  +TYT++I   
Sbjct: 461 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 520

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   ++A +++  M ++   PDV     LI  L   G   EA ++F  + E  LEP D
Sbjct: 521 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 580

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++ G  +EG     + LL EM      PN+ +Y++ +  LC++G   +A  +L  
Sbjct: 581 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 640

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G  P +S YN +
Sbjct: 641 MTTKGCIPDLSSYNTV 656



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 231/498 (46%), Gaps = 42/498 (8%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  ++ A  K R  +  L+   +M   GV+P   ++   +  + ++  FD+ + 
Sbjct: 227 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 286

Query: 163 FFS--ENR-CKVELDVYSFGILIKGCCEAGDLNKA------------------------- 194
             +  EN  CK   DV +  +LI+  C+AG ++ A                         
Sbjct: 287 ILAKMENEGCKP--DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 344

Query: 195 ----------FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                      E+ N ++  G++ NVV YT++ID  C+ G +  A  +F ++ + G+V  
Sbjct: 345 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 404

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q++Y  LI G  K     D  E ++ M ++G  P+ YT+   I+ Y   G+  +  + ++
Sbjct: 405 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 464

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  G+SP+ ITY  +I     A 
Sbjct: 465 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 524

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A ++F  +  N   P V+  N LI    KAG    A  +  +++E  + P++ TY 
Sbjct: 525 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 584

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L+    R   +++   +   M  S + P++ TY  ++  LC  G + +A  +  SM   
Sbjct: 585 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 644

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+   YN +I+G  KE     A  +  +M +K L+P+ A+  + +    + G   EA
Sbjct: 645 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEA 703

Query: 545 -EVLLNQMLKLGLKPSVS 561
             ++ +  L+ G K   S
Sbjct: 704 LHIIKDYFLQPGSKTDRS 721



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++G    GD+ + F+V+   +      NV  + ++  G    G +  A +    + E G
Sbjct: 134 LMRGHGRVGDMAEVFDVM---QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V   +TY  L+  L K+G  ++  E Y  M ++GV PS+ TY+ L+  +     V    
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM    V  NV +Y   I  L +  R  EA R+L +M+  G  P+VIT+  LI   
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K + Q P  VTY  L+  F   G+S+   ++   M+  G   + 
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V YT +ID+  +   + +A EM+  M++ G  P+ Y+Y  LI G        +A +LF  
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M     +PN   + + I  Y K G S +A++    M  KG+VP++ + ++ +  L + G+
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ + +++  +G+ P    Y ++ +
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIK 518



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 224/517 (43%), Gaps = 57/517 (11%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           P +  P  + R  E +I A   +    +AL  F     +  +PR       +     SC+
Sbjct: 80  PRAPPPCDERRAAEDVIHALRSADGPAEALERFRS---AARKPR-------VAHTTASCN 129

Query: 157 F------------DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +            D   +F    R  V+ +V +F  +  G    G L  A   L  ++E 
Sbjct: 130 YMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA 189

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G   N   Y  L+    K+G    A  ++R +   G+V +  TY+VL+    K    +  
Sbjct: 190 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 249

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                +M+ +GV P++Y+Y   I       +  E +++  +M +     +V+T+  LI  
Sbjct: 250 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 309

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LC   R+ +A+ +  +MK +   P+ +TY  L+D F D G++     ++N +K++G + +
Sbjct: 310 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 369

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM-- 442
           VV Y  +I A  + G    A ++  EM+++GI P + +Y  LI  F+++D    A E+  
Sbjct: 370 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 429

Query: 443 ---------------------------------YSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                                            Y LM+  G  PDV     ++ GL   G
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 489

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A ++F+ +    + P+ + Y MMI    K      A+++  +M E   VP++ + +
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S I  L + G+  EA  +  Q+ ++ L+P+   YN L
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 586



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 38/461 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +I    K+   D+A+  F+ M+++   P     NSL+  + K+   D+ W +F+   
Sbjct: 513 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 572

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E    ++  L+ G    G + +   +L ++    + PN++ Y +++D  CKNG + 
Sbjct: 573 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 632

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +   G +    +Y  +I GL K     + F  + +M+   + P   T   ++
Sbjct: 633 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTIL 691

Query: 288 HEYCNEGKVSEGFKLFDEMRHRE-------------------------------VACNVV 316
             +   G + E   +  +   +                                +A + +
Sbjct: 692 PSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGI 751

Query: 317 TYN-----TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           T +      LI  LCK+ +  EA  L+ + K  G+S     YN LI G  D    D A  
Sbjct: 752 TLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEG 811

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF ++K  G  P   TYN+L+ A  K+   +    +  EM  +G   + VTY  +I   V
Sbjct: 812 LFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLV 871

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +S  +E+A ++Y  +   GFSP   TYG L+ GL   G +++A  LFN M E   + N  
Sbjct: 872 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 931

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +YN+++ G+   GN+ +   L  +M ++G+ P+I SY+  I
Sbjct: 932 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 218/502 (43%), Gaps = 41/502 (8%)

Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KV 171
           I+ + KS  S +A+  +  M   G+ P     N++L  + KS         F E +   V
Sbjct: 447 INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGV 506

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D  ++ ++IK C +A   ++A ++   + E    P+V+   SLID   K G  + A  
Sbjct: 507 SPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWR 566

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F ++ E+ L  T  TY  L+ GL + G  K+     E+M  +   P+L TYN ++   C
Sbjct: 567 IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 626

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G V++   +   M  +    ++ +YNT+I GL KE R  EA  +  QMK   I P+  
Sbjct: 627 KNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYA 685

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQ---------------------LKSNGQSPSVVTYNV 390
           T   ++  F   G   +A  +                        LK  G   S+    +
Sbjct: 686 TLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEI 745

Query: 391 ---------------LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
                          LI+   K   +  A +LV++ +  G++     Y  LI   V  + 
Sbjct: 746 IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 805

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A  +++ M++ G  PD +TY +L+  +     ++E  K+   M     E   V YN 
Sbjct: 806 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 865

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G  K     +A+ L   +  +G  P   +Y   +  L + G+  +AE L N+ML+ G
Sbjct: 866 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 925

Query: 556 LKPSVSLYNIL---YRAKNNIE 574
            K + ++YNIL   +R   N E
Sbjct: 926 CKANCTIYNILLNGHRIAGNTE 947



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 149/356 (41%), Gaps = 36/356 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+D   K+   + AL   + M   G  P  +++N+++  ++K   +++ +  F + +
Sbjct: 618 YNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 677

Query: 169 ----------CKVELDVYSFGI--------------------------LIKGCCEAGDLN 192
                     C +       G+                          L++G  +   + 
Sbjct: 678 KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 737

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           K+ E    +   G + +      LI   CK      A  L +K    G+      Y  LI
Sbjct: 738 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 797

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           CGL    L       + +M+  G  P  +TYN L+       ++ E  K+ +EM  +   
Sbjct: 798 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 857

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
              VTYNT+I GL K  R+++A  L   +   G SP   TY  L+DG   AG  + A  L
Sbjct: 858 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 917

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           FN++   G   +   YN+L+     AGN++    L ++M ++GI P   +YTI+ID
Sbjct: 918 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 1/184 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K+ LY S+I   +   L D A   F +M + G  P   T+N LL  + KS   ++     
Sbjct: 789 KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 848

Query: 165 SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K 
Sbjct: 849 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 908

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G IE A+ LF ++ E G  A    Y +L+ G    G  +     ++ M   G++P + +Y
Sbjct: 909 GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 968

Query: 284 NCLI 287
             +I
Sbjct: 969 TIII 972


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 208/428 (48%), Gaps = 21/428 (4%)

Query: 157 FDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FDK +    E  R     D  ++  +I   C A  + KAF +  +++ +G +P+V  YT 
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LID  CK G IE+A+ LF ++  +G   T  TYT LI    K        + + +M   G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-----------------RHREVACNVVTY 318
             P+  TY  L+   C  G +S+ F+++ ++                 RH  +A NVVTY
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH-TLAPNVVTY 447

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             L+ GLCK  +V  A  LLD M  +G  PN I Y+ LIDGFC AG+ D A  +F Q+  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  PSV TY  LI    K G   +A  ++ +M +   TP+ VTYT +ID   R  + EK
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++ SLM++ G SP+V TY  LI GL   G +  +  LF  M      PN V Y ++I 
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             C  G   +A  LLGEM +      +  Y   I    +   +  +  +L +M   G  P
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 685

Query: 559 SVSLYNIL 566
              +Y +L
Sbjct: 686 IAPVYGML 693



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 216/439 (49%), Gaps = 35/439 (7%)

Query: 157 FDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FD+   F    RC   + +V ++  L+ G  +   L     ++N +   G +PN  ++ S
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQ 272
           L+   C   D   A  L  ++   G       Y + I   CG  K     D  +  EK  
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEK-- 239

Query: 273 LNGVSPSLYTYNCLIHEY---------CNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
              +   +   NC++++          C  GK  + F+L  EM  +    +  TY+ +I 
Sbjct: 240 ---IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC   +V++A  L  +MKM G++P+V TY  LID FC AG  ++A  LF +++S G SP
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI A+ KA     A+D+   M + G  P++VTY  L+D   ++ ++ KAFE+Y
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416

Query: 444 SLM----------------QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + +                 +   +P+V TYG L+ GLC    +  A +L ++M  +  E
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN +VY+ +I G+CK G    A  +  +M + G +P++ +Y+S I  + +DG+   A  +
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+QMLK    P+V  Y  +
Sbjct: 537 LSQMLKDSCTPNVVTYTAM 555



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 225/515 (43%), Gaps = 62/515 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I   +++   D+A+ + H+M  +   P   T+ +LL   +K      GW     N    
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL--GWCKRIINMMMT 170

Query: 172 E---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN----- 223
           E    +   F  L+   C   D   A+++LN++   G  P  V+Y   I   C       
Sbjct: 171 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 230

Query: 224 ------------------------------------GDIERAKMLFRKIGELGLVATQHT 247
                                               G  ++A  L +++   G V    T
Sbjct: 231 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ +I  L      +  F  +++M++ GV+P +YTY  LI  +C  G + +   LF+EMR
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
               +  VVTY  LI    K  +V +A  +  +M  AG  PN +TY  L+DG C AG   
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410

Query: 368 KAFRLFNQLKSNGQS----------------PSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           KAF ++ +L     S                P+VVTY  L+    KA     A +L+  M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P+ + Y  LID F ++  ++ A E++  M K G+ P V+TY  LI  +   G +
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A K+ + M +    PN V Y  MI G C+ G S +AL+LL  M EKG  PN+ +Y++ 
Sbjct: 531 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  L + GK   +  L  QM + G  P+   Y +L
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 223/444 (50%), Gaps = 25/444 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK--------------- 153
           Y ++I A+LK++   QA   FH+M+D+G RP   T+ +L+  + K               
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 154 --SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
             S S D  + F  E+R  +  +V ++G L+ G C+A  ++ A E+L+ +   G  PN +
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           +Y +LIDG CK G I+ A+ +F ++ + G + + HTYT LI  +FK+G      +   +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +  +P++ TY  +I   C  G+  +  KL   M  +  + NVVTY  LI GL K  ++
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             +  L  QM   G SPN +TY  LI+  C AG  DKA  L  ++K       +  Y   
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--S 449
           I+ FSK+  + +   ++ EME  G  P    Y +LID F ++  +E A E++  M +  S
Sbjct: 661 IQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
               D   Y  LI  LC+   ++EA +L++ M      P   V+  +I G  +      A
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778

Query: 510 LRLL-GEMNEKGLVPNIASYSSTI 532
           L+L  G  +E GL   + SY++ I
Sbjct: 779 LQLCYGICHEVGL---LLSYTTQI 799



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 222/509 (43%), Gaps = 87/509 (17%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+A     +M+  G  P ++T++ ++ F+  +   +K +L F E +   V  DVY++ IL
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A  +  ++  +G SP VV YT+LI    K   + +A  +F ++ + G 
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKM----------------QLNGVSPSLYTYNC 285
                TY  L+ GL K G     FE Y K+                  + ++P++ TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   KV    +L D M       N + Y+ LI G CK  ++  A+ +  QM   G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 346 -----------------------------------ISPNVITYNKLIDGFCDAGETDKAF 370
                                               +PNV+TY  +IDG C  GE++KA 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L + ++  G SP+VVTY  LI    KAG   ++ DL  +M  +G +P+ VTY +LI+  
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 431 VRSDDMEKAFEMYSLMQKS--------------GFS-------------------PDVYT 457
             +  ++KA  +   M+++              GFS                   P    
Sbjct: 630 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 689

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWE--TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           YG+LI      G ++ A +L   M E  + ++ ++ +Y  +I   C       A RL  E
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           M  +G VP ++ +   I  L +  KW EA
Sbjct: 750 MTRRGFVPELSVFVCLIKGLVEVKKWDEA 778



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 195/483 (40%), Gaps = 97/483 (20%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLFRK 235
           ++  L++    AG ++  F V  ++ E GF  +           CK G    A  M+ R+
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY------------ 283
             +L  V   H    +I GL +     +   F  +M+ N   P++ TY            
Sbjct: 102 DFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157

Query: 284 -----------------------NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                                  N L+H YCNE   +  +KL + M         V YN 
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 321 L---ICG--------------------------------------LCKEMRVQEAERLLD 339
               ICG                                      LC   +  +A +L+ 
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G  P+  TY+K+I   C A + +KAF LF ++K  G +P V TY +LI +F KAG
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             + A  L  EM   G +P+ VTYT LI +++++  + +A +++  M  +G  P+  TYG
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETK----------------LEPNDVVYNMMIFGYCKE 503
            L+ GLC  GN+ +A +++  +  T                 L PN V Y  ++ G CK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                A  LL  M   G  PN   Y + I   C+ GK   A+ +  QM K G  PSV  Y
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 517

Query: 564 NIL 566
             L
Sbjct: 518 TSL 520



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 9/298 (3%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  PS  TYN L+    + G+V  GF++  EM       +  T       LCKE R  +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
              LD ++      + +    +I G  +A   D+A    ++++ N   P+VVTY  L+  
Sbjct: 95  ---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F K         ++  M   G  P+   +  L+ S+    D   A+++ + M   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 455 VYTYGVLIHGLCMKGNMKE------ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              Y + I  +C +  +        A K++  M       N V         C  G   +
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A +L+ EM  KG VP+ ++YS  I  LC   K  +A +L  +M  +G+ P V  Y IL
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 9/338 (2%)

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G   ++ TY  L+  L   G    GF   ++M  +G     +T  C  H  C EG+ +
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           +     D +   +   + V    +I GL +     EA   L +M+     PNV+TY  L+
Sbjct: 93  DAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GF    +     R+ N + + G +P+   +N L+ ++    +   A  L+  M   G  
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 418 PSEVTYTILIDSFV------RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           P  V Y I I S          D ++ A ++Y  M  +    +          LC  G  
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A +L   M      P+   Y+ +I   C      +A  L  EM   G+ P++ +Y+  
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I   C+ G   +A+ L  +M  +G  P+V  Y  L  A
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 3/209 (1%)

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           D +K  G  P+ +TYN L+     AG+ D  FR+  ++  +G      T      A  K 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A D++   E        V  T +I   + +   ++A      M+ +   P+V TY
Sbjct: 89  GRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G   K  +    ++ N M      PN  ++N ++  YC E +   A +LL  M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            G  P    Y+  IG +C   K P  ++L
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLL 234



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 32/207 (15%)

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +RA  +   S  A D    +++ G  PS+VTY  L+     +  ++  F +   M +SGF
Sbjct: 12  LRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 452 SPDVYTYGVLIHGLCMKGN--------------------------------MKEASKLFN 479
             D +T G   H LC +G                                   EA    +
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLH 131

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M      PN V Y  ++ G+ K+       R++  M  +G  PN + ++S +   C + 
Sbjct: 132 RMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  A  LLN+M   G  P   +YNI 
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIF 218


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 227/456 (49%), Gaps = 1/456 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+   L +   + AL  F +M+ S   P    F  LL  + K   +D     F + +
Sbjct: 51  YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +   + +  I++   C +    +A   L ++ ++GF P++V +TSL++G C    IE
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF +I  +G      TYT LI  L KN       E + +M  NG  P++ TYN L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+  +   L  +M  R +  NV+T+  LI    K  ++ EA+ L + M    + 
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V TY  LI+G C  G  D+A ++F  ++ NG  P+ V Y  LI  F K+   +    +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM ++G+  + +TYT+LI  +      + A E+++ M      PD+ TY VL+ GLC 
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +++A  +F  M + +++ N V Y ++I G CK G    A  L   +  KG+ PN+ +
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           Y++ I   C+ G   EA+ L  +M + G  P+ S+Y
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 176/328 (53%), Gaps = 13/328 (3%)

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           L ++A  + Y V+I               +E+MQ+ G+ P L T N ++H  C   +   
Sbjct: 90  LSVIAKMNRYDVVI-------------SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
                 +M       ++VT+ +L+ G C   R+++A  L DQ+   G  PNV+TY  LI 
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C     + A  LFNQ+ +NG  P+VVTYN L+    + G    A+ L+R+M +R I P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +T+T LID+FV+   + +A E+Y++M +    PDV+TYG LI+GLCM G + EA ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M      PN+V+Y  +I G+CK       +++  EM++KG+V N  +Y+  I   C  
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+   A+ + NQM      P +  YN+L
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVL 404



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 126/272 (46%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           + ++   LF  M H     +++ +  L+  + K  R      L +QM++ GI P + T N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            ++   C + +  +A     ++   G  P +VT+  L+  +      + A  L  ++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ VTYT LI    ++  +  A E+++ M  +G  P+V TY  L+ GLC  G   +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           + L   M + ++EPN + +  +I  + K G    A  L   M +  + P++ +Y S I  
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G   EA  +   M + G  P+  +Y  L
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 20/277 (7%)

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTL-ICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
             + +GF L    RHR    N  T  +L +CG C  +R                     +
Sbjct: 10  ASIVKGFHLHSH-RHRLQISNPRTAASLSLCGFCFWIRAFS------------------S 50

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y K++       + + A  LF ++  +   PS++ +  L+   +K     +   L  +M+
Sbjct: 51  YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             GI P   T  I++     S    +A      M K GF PD+ T+  L++G C    ++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A  LF+ +     +PN V Y  +I   CK  +   A+ L  +M   G  PN+ +Y++ +
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             LC+ G+W +A  LL  M+K  ++P+V  +  L  A
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 1/152 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S    V  +  Y  +I  +      D A   F+QM      P   T+N LL  +  +   
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +K  + F   R + +++++ ++ I+I+G C+ G +  AF++   L   G  PNV+ YT++
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           I G C+ G I  A  LF+K+ E G +  +  Y
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 220/464 (47%), Gaps = 12/464 (2%)

Query: 112 IIDAHLKSRLSDQAL-FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---- 166
           +I A+  S L ++AL  Y+  +      P     NSLL  ++K    +     + E    
Sbjct: 135 VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEI 194

Query: 167 ----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
               +RC   +D YS  I++KG C+ G L +  +++      G  PN++ Y +LIDG CK
Sbjct: 195 DGAGDRC---VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCK 251

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            GD+E A  LF ++   G + T  TY  +I G  K G  K       +M   G++ ++  
Sbjct: 252 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 311

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN +I      G + +  +  + M       ++VTYNTLI G C++ +V EA++LL+Q  
Sbjct: 312 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN  +Y  LI  +C  G  D+A     ++   G  P +VTY  L+     AG   
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           +A  +  +M ERG+ P    Y IL+    +   +  A  + + M      PD + Y  L+
Sbjct: 432 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 491

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G    GN+ EA KLF    E  + P  V YN MI GYCK G    A+  +  M ++ L 
Sbjct: 492 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 551

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P+  +YS+ I    +      A+ +  +M+K+  KP+V  Y  L
Sbjct: 552 PDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 221/472 (46%), Gaps = 15/472 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
            Y ++ID + K    + A   F ++   G  P   T+ +++    K   F     L    
Sbjct: 241 FYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM 300

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   + ++V  +  +I    + G + KA E +  + E G  P++V Y +LI G C++G +
Sbjct: 301 NSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKV 360

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  +    GL+  + +YT LI    K G       +  +M   G  P L TY  L
Sbjct: 361 SEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGAL 420

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H     G+V     + ++M  R V  +   YN L+ GLCK+ ++  A+ LL +M    +
Sbjct: 421 VHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSV 480

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  L+DGF   G  D+A +LF      G +P +V YN +I+ + K G  K A  
Sbjct: 481 LPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMA 540

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            +  M++R + P E TY+ +ID +V+  D++ A +M+  M K    P+V TY  LI+G C
Sbjct: 541 CINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFC 600

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            KG++  + K+F  M    L PN V Y+++I  +CKE     A     EM     VPN  
Sbjct: 601 RKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDV 660

Query: 527 SYSSTIGVLCQDGKWPEAE-----------VLLN---QMLKLGLKPSVSLYN 564
           +++  +    ++G    +E           + LN   +M+  G  P  + YN
Sbjct: 661 TFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYN 712



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 199/428 (46%), Gaps = 35/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           ++  +  LI G C+ GD+  A  +  +L+  GF P V  Y ++I+G CK GD +    L 
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLL 297

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL      Y  +I   +K+G      E  E M   G  P + TYN LI   C +
Sbjct: 298 MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 357

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GKVSE  +L ++   + +  N  +Y  LI   CK+     A   L +M   G  P+++TY
Sbjct: 358 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G   AGE D A  +  ++   G  P    YN+L+    K      A  L+ EM +
Sbjct: 418 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 477

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + + P    Y  L+D F+R+ ++++A +++ L  + G +P +  Y  +I G C  G MK+
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537

Query: 474 -----------------------------------ASKLFNSMWETKLEPNDVVYNMMIF 498
                                              A K+F  M + K +PN V Y  +I 
Sbjct: 538 AMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLIN 597

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+C++G+ +R+L++  EM   GLVPN+ +YS  IG  C++ K  +A     +ML     P
Sbjct: 598 GFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVP 657

Query: 559 SVSLYNIL 566
           +   +N L
Sbjct: 658 NDVTFNYL 665



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 197/398 (49%), Gaps = 5/398 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLN-QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +  I+I+   ++G + KA E+    L+   + P+V+   SL++   K G IE A+ L+ +
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDE 190

Query: 236 IGELGLVATQ----HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           + E+     +    ++  +++ GL K G  ++G +  E     G  P++  YN LI  YC
Sbjct: 191 MLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYC 250

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G +     LF E++ +     V TY  +I G CK+   +  +RLL +M   G++ NV 
Sbjct: 251 KKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQ 310

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            YN +ID     G   KA      +   G  P +VTYN LI    + G    A  L+ + 
Sbjct: 311 VYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA 370

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +G+ P++ +YT LI ++ +    ++A      M + G  PD+ TYG L+HGL + G +
Sbjct: 371 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEV 430

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A  +   M E  + P+  +YN+++ G CK+     A  LL EM ++ ++P+   Y++ 
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +    ++G   EA  L    ++ G+ P +  YN + + 
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 528



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 212/452 (46%), Gaps = 15/452 (3%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y +IIDA  K     +A+     M++ G +P   T+N+L+    +     +      +
Sbjct: 310 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ 369

Query: 167 NRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K  + + +S+  LI   C+ G  ++A   L ++ E G  P++V Y +L+ G    G+
Sbjct: 370 ALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE 429

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +  K+ E G+      Y +L+ GL K            +M    V P  + Y  
Sbjct: 430 VDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT 489

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  +   G + E  KLF+    + +   +V YN +I G CK   +++A   +++MK   
Sbjct: 490 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 549

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++P+  TY+ +IDG+    + D A ++F ++      P+VVTY  LI  F + G+   + 
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSL 609

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG- 464
            + REM+  G+ P+ VTY+ILI SF +   +  A   +  M  +   P+  T+  L++G 
Sbjct: 610 KIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669

Query: 465 -------LCMKGNMKEASK------LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
                  +  KGN  + +K       F  M      P    YN ++   C+ G    AL+
Sbjct: 670 SKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQ 729

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           L  +M  KG +P+  S+ + +  +C +G+  E
Sbjct: 730 LSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 42/316 (13%)

Query: 296 VSEGFKLFDEMRHREVA--CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           V  G K FD +   + +   N   Y++L+  L +     E E +L+ M++  +SP     
Sbjct: 73  VELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM 132

Query: 354 NKLIDGFCDAGETDKAFRLFN-QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           + +I  + D+G  +KA  L+   LK+    P V+  N L+    K G  ++A  L  EM 
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML 192

Query: 413 E---------------------------------------RGITPSEVTYTILIDSFVRS 433
           E                                       +G  P+ + Y  LID + + 
Sbjct: 193 EIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKK 252

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            DME A  ++  ++  GF P V TYG +I+G C KG+ K   +L   M    L  N  VY
Sbjct: 253 GDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 312

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I    K G+  +A+  +  M E G  P+I +Y++ I   C+DGK  EA+ LL Q L 
Sbjct: 313 NTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 372

Query: 554 LGLKPSVSLYNILYRA 569
            GL P+   Y  L  A
Sbjct: 373 KGLMPNKFSYTPLIHA 388


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 234/463 (50%), Gaps = 7/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + +++    K+ + + A     +M D G  P + TF S+L     S    +  L   E  
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF-SILFDGYSSNEKAEAALGVYETA 345

Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V+++ Y+  IL+   C+ G + KA E+L +    G  PN VIY ++IDG C+ GD+
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+M    + + G+      Y  LI    + G  ++  +   KM+L GVSPS+ TYN L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y  + +  + F +  EM       NVV+Y TLI  LCK  ++ EA+ +   M+  G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP V  YN LIDG C  G+ + AFR   ++   G   ++VTYN LI   S  G    A D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ E+  +G+ P   TY  LI  +  + ++++   +Y  M++SG  P + TY +LI  LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLC 644

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            K  ++   +LF  M    L+P+ +VYN ++  Y   G+  +A  L  +M EK +  +  
Sbjct: 645 TKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+S I    + GK  E   L+++M    ++P    YNI+ + 
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 268/556 (48%), Gaps = 21/556 (3%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P + FS F+ +S   L+H    + + + L  SKM S     A  L   + +  I  SS +
Sbjct: 92  PKELFSAFSLSS-PSLKHDFSYLLLSVLLNESKMISE----AADLFFALRNEGIYPSSDS 146

Query: 85  PRSLLCHLTQ-------------LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
              LL HL +             +  S   P     +Y   I A +K     + L  F++
Sbjct: 147 LTLLLDHLVKTKQFRVTINVFLNILESDFRP--SKFMYGKAIQAAVKLSDVGKGLELFNR 204

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGD 190
           M    + P    +N L+  + K    +     F E   +  L  + ++  LI G C+AG+
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
             K+F+V  +++     P+++ + +L+ G  K G +E A+ + +++ +LG V    T+++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L  G   N   +     YE    +GV  + YT + L++  C EGK+ +  ++      + 
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  N V YNT+I G C++  +  A   ++ M+  G+ P+ + YN LI  FC+ GE + A 
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +  N++K  G SPSV TYN+LI  + +        D+++EME+ G  P+ V+Y  LI+  
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   + +A  +   M+  G SP V  Y +LI G C KG +++A +    M +  +E N 
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I G    G    A  LL E++ KGL P++ +Y+S I      G       L  +
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624

Query: 551 MLKLGLKPSVSLYNIL 566
           M + G+KP++  Y++L
Sbjct: 625 MKRSGIKPTLKTYHLL 640



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 223/460 (48%), Gaps = 9/460 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +ID   K +  + A   F +ML   + P   T+N+L+    K+ + +K   F    
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS--FKVRE 273

Query: 168 RCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           R K   +E  + +F  L+KG  +AG +  A  VL +++++GF P+   ++ L DG   N 
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             E A  ++    + G+    +T ++L+  L K G  +   E   +    G+ P+   YN
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I  YC +G +       + M  + +  + + YN LI   C+   ++ AE+ +++MK+ 
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+SP+V TYN LI G+    E DK F +  +++ NG  P+VV+Y  LI    K      A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             + R+ME+RG++P    Y +LID       +E AF     M K G   ++ TY  LI G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           L M G + EA  L   +    L+P+   YN +I GY   GN  R + L  EM   G+ P 
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           + +Y   I  LC        E L  +M    LKP + +YN
Sbjct: 634 LKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYN 669



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 141/307 (45%), Gaps = 5/307 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I+   K     +A      M D GV P+   +N L+         +  + F  E  
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K +EL++ ++  LI G    G L++A ++L ++   G  P+V  Y SLI G    G+++
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           R   L+ ++   G+  T  TY +LI    K G++     F E      + P L  YN ++
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM----SLKPDLLVYNGVL 672

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y   G + + F L  +M  + +  +  TYN+LI G  K  ++ E   L+D+M    + 
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P   TYN ++ G C+  +   A+  + +++  G    V   N L+    +   SK A  +
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIV 792

Query: 408 VREMEER 414
           + EM  R
Sbjct: 793 ISEMNGR 799



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 103/200 (51%)

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  LF  L++ G  PS  +  +L+    K    ++  ++   + E    PS+  Y   I
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            + V+  D+ K  E+++ M+     P V+ Y VLI GLC    M +A +LF+ M   +L 
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ + YN +I GYCK GN  ++ ++   M    + P++ ++++ +  L + G   +AE +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 548 LNQMLKLGLKPSVSLYNILY 567
           L +M  LG  P    ++IL+
Sbjct: 307 LKEMKDLGFVPDAFTFSILF 326



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A+DL   +   GI PS  + T+L+D  V++        ++  + +S F P  + YG  I 
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
                 ++ +  +LFN M   ++ P+  +YN++I G CK      A +L  EM  + L+P
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILYRA 569
           ++ +Y++ I   C+ G  PE    + + +K   ++PS+  +N L + 
Sbjct: 248 SLITYNTLIDGYCKAGN-PEKSFKVRERMKADHIEPSLITFNTLLKG 293


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 265/556 (47%), Gaps = 18/556 (3%)

Query: 25  PLKAFSLFNWASRQGLQ-HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +A  LF  A+RQ  + HT +S + +L L    M +H        +  ++  ++  ++ 
Sbjct: 81  PAEALELFTAAARQPTKVHTTESCNYMLEL----MRAHGRVGDMAQVFDLMQKQVVKTNV 136

Query: 84  -TPRSLLCHLTQLFPSSSNPVT-----------KSRLYESIIDAHLKSRLSDQALFYFHQ 131
            T  ++   +       S PV             +  Y  +I   +KS    +A+  +  
Sbjct: 137 GTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKA 196

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M++ G+ P   T++ L++   K    D   WL        V+ +VYS+ I I+   +A  
Sbjct: 197 MVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAAR 256

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            ++A+ +L ++E+ G  P+VV +T +I   C  G +  AK +F K+        + TY  
Sbjct: 257 FDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYIT 316

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+     +G  +   E +  M  +G + ++ +Y  ++   C  G+V E   +FDEM+ + 
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKG 376

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           ++    +YN+LI G  K      A  L + M   G SPN  T+   I+ +  +G++ KA 
Sbjct: 377 MSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + +  +KS G  P V   N ++ + + +G   MA  +  E++  G++P  +TYT++I   
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCC 496

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   ++A   +S M +SG  PDV     LI  L   G   EA +LF+ + E K+EP +
Sbjct: 497 SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++ G  +EG     ++LL EM      PN+ +Y++ +  L ++G+   A  +L  
Sbjct: 557 GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 551 MLKLGLKPSVSLYNIL 566
           M + G  P +S YN +
Sbjct: 617 MTEKGCAPDLSSYNTV 632



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 224/462 (48%), Gaps = 1/462 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++D   K+   + A+   + M + G  P  +++N+++  +IK    ++ +  F + +
Sbjct: 594  YNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK 653

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   ++    + G + +A   + + + + G + +   + SL++G  K   +E
Sbjct: 654  KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVE 713

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++      I   G++        LI  L K+    +  + + K +  GVS    +YN LI
Sbjct: 714  KSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLI 773

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +E  +     LF EM+      +  TYN ++  + K MRV+E  ++  +M   G  
Sbjct: 774  RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYE 833

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               +TYN +I G   +   ++A  L+  L S G SP+  TY  L+    K+G    A +L
Sbjct: 834  STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENL 893

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              EM E G  P+   Y IL++    + + E   +++  M + G +PD+ +Y +LI  LC 
Sbjct: 894  FNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCT 953

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G + +    F  + E  LEP+ +VYN++I G  K      A+ L  EM +KG++PN+ +
Sbjct: 954  AGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYT 1013

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I  L + GK  EA  +  ++L+ G KPSV  YN L R 
Sbjct: 1014 YNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRG 1055



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 2/423 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGIL 181
           D+A     +M DSG +P   T   ++  +  +    D   +F+       + D  ++  L
Sbjct: 258 DEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITL 317

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +  C ++GD     EV N +   G++ N+V YT+++D  C+ G ++ A  +F ++ E G+
Sbjct: 318 LDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGM 377

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q++Y  LI G  K  +     E +  M   G SP+ YT+   I+ Y   G+  +  +
Sbjct: 378 SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQ 437

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            ++ M+ + +  +V   N ++  L    R+  A+R+  ++K  G+SP+ ITY  +I    
Sbjct: 438 RYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCS 497

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A + D+A   F+ +  +G  P V+  N LI    K G    A  L  +++E  I P+  
Sbjct: 498 KASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNG 557

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY  L+    R   +++  ++   M ++ + P++ TY  ++  L   G +  A  +  SM
Sbjct: 558 TYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSM 617

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            E    P+   YN +++G  KE     A R+  +M +K L P+ A+  + +    ++G  
Sbjct: 618 TEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLM 676

Query: 542 PEA 544
            EA
Sbjct: 677 KEA 679



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 192/388 (49%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++     GD+ + F+++   ++     NV  + ++  G    G +  A +    + E G
Sbjct: 110 LMRAHGRVGDMAQVFDLM---QKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAG 166

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    +TY  LI  L K+G   +  E Y+ M  +G+SPS+ TY+ L+  +  +  V    
Sbjct: 167 MSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVL 226

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L +EM  R V  NV +Y   I  L +  R  EA  +L +M+ +G  P+V+T+  +I   
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVL 286

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K++ Q P  VTY  L+     +G+S+   ++   M   G   + 
Sbjct: 287 CDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNI 346

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+YT ++D+  +   +++A  ++  M++ G SP+ Y+Y  LI G         A +LFN 
Sbjct: 347 VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH 406

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      PN   + + I  Y K G S +A++    M  KG+VP++A+ ++ +  L   G+
Sbjct: 407 MNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGR 466

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ +  ++  +G+ P    Y ++ +
Sbjct: 467 LGMAKRVFYELKAMGVSPDTITYTMMIK 494



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 220/463 (47%), Gaps = 3/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +++DA  +    D+AL  F +M + G+ P   ++NSL+   +K+  FD+    F+  N
Sbjct: 349 YTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMN 408

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C    + Y+  + I    ++G   KA +    ++  G  P+V    +++     +G + 
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLG 468

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++  +G+     TYT++I    K     +   F+  M  +G  P +   N LI
Sbjct: 469 MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLI 528

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 GK +E ++LF +++  ++     TYNTL+ GL +E +V+E  +LL++M      
Sbjct: 529 DTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP 588

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+ITYN ++D     GE + A  +   +   G +P + +YN ++    K    + A  +
Sbjct: 589 PNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRM 648

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFE-MYSLMQKSGFSPDVYTYGVLIHGLC 466
             +M+ + + P   T   ++ SFV++  M++A   +   + K+G + D  ++  L+ G+ 
Sbjct: 649 FCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGIL 707

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            K  ++++ +   ++    +  ND     +I   CK   +  A +L  +    G+     
Sbjct: 708 KKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG 767

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           SY+S I  L  +     AE L  +M +LG  P    YN++  A
Sbjct: 768 SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA 810



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 1/323 (0%)

Query: 105  KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
            K+  Y S+I   +   L D A   F +M   G  P   T+N +L  + KS   ++     
Sbjct: 765  KTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQ 824

Query: 165  SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K+
Sbjct: 825  KEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKS 884

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G +  A+ LF ++ E G       Y +L+ G    G  ++  + +EKM   G++P + +Y
Sbjct: 885  GKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSY 944

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              LI   C  G++++G   F ++    +  +++ YN LI GL K  R++EA  L ++MK 
Sbjct: 945  TILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKK 1004

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             GI PN+ TYN LI     AG+  +A +++ +L   G  PSV TYN LIR +S +G++  
Sbjct: 1005 KGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDN 1064

Query: 404  ASDLVREMEERGITPSEVTYTIL 426
            A     +M   G  P+  TY  L
Sbjct: 1065 AYAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 151/323 (46%)

Query: 171  VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            V L   S+  LI+G  +   ++ A ++  +++ +G  P+   Y  ++D   K+  +E   
Sbjct: 762  VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEML 821

Query: 231  MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             + +++   G  +T  TY  +I GL K+   +   + Y  +   G SP+  TY  L+   
Sbjct: 822  KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 881

Query: 291  CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
               GK+ +   LF+EM       N   YN L+ G       +   +L ++M   GI+P++
Sbjct: 882  LKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDI 941

Query: 351  ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
             +Y  LID  C AG  +     F QL   G  P ++ YN+LI    K+   + A  L  E
Sbjct: 942  KSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNE 1001

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            M+++GI P+  TY  LI    ++    +A +MY  + + G+ P V+TY  LI G  + G+
Sbjct: 1002 MKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGS 1061

Query: 471  MKEASKLFNSMWETKLEPNDVVY 493
               A   +  M     +PN   Y
Sbjct: 1062 TDNAYAAYGQMIVGGCQPNSSTY 1084



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)

Query: 116  HL-KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVEL 173
            HL K + + +A   F++    GV  ++ ++NSL+  ++     D     F+E  R     
Sbjct: 740  HLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGP 799

Query: 174  DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            D +++ +++    ++  + +  +V  ++   G+    V Y ++I G  K+  +E+A  L+
Sbjct: 800  DEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 859

Query: 234  RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
              +   G   T  TY  L+ GL K+G   D    + +M   G  P+   YN L++ +   
Sbjct: 860  YNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA 919

Query: 294  GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            G      +LF++M  + +  ++ +Y  LI  LC   R+ +      Q+   G+ P++I Y
Sbjct: 920  GNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVY 979

Query: 354  NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
            N LIDG   +   ++A  LFN++K  G  P++ TYN LI    KAG +  A+ +  E+  
Sbjct: 980  NLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLR 1039

Query: 414  RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
            +G  PS  TY  LI  +  S   + A+  Y  M   G  P+  TY
Sbjct: 1040 KGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 89   LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
            LC+  QL      P     +Y  +ID   KS   ++A+  F++M   G+ P   T+NSL+
Sbjct: 961  LCYFRQLHELGLEP--DLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLI 1018

Query: 149  IFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
            + + K+    +    + E  R   +  V+++  LI+G   +G  + A+    Q+   G  
Sbjct: 1019 LHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQ 1078

Query: 208  PNVVIYTSL 216
            PN   Y  L
Sbjct: 1079 PNSSTYMQL 1087


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 223/494 (45%), Gaps = 31/494 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+Y  ++DA L+  +    +  +  M  +GV P   T+N L+  + ++   D       E
Sbjct: 123 RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDE 182

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKA------------------------------F 195
            +R     D  S G ++ G C+ G + +A                              F
Sbjct: 183 MSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVF 242

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V+N++ + G  PNVV YT+++D  CK  ++  A  +  ++  +G      T+T L+ G 
Sbjct: 243 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 302

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F++G   D    +  M   G +PS  +YN LI   C  G +      F+ M+   +  N 
Sbjct: 303 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 362

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+TL+ G      +  A  + ++MK +G  PNV+ Y  +ID  C     D+A  L ++
Sbjct: 363 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 422

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  +   P+ VT+N LI      G    A ++   M   G  P++ TY  L+    R  +
Sbjct: 423 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            + AF M   M  +GF   + TY  +I+ LC     K A  L   M    ++P+   +N 
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 542

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  YCKEG    A  LLG+MN      N+ +Y+  I  LC  GK   A V L +ML  G
Sbjct: 543 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602

Query: 556 LKPSVSLYNILYRA 569
           + P+ + +N+L RA
Sbjct: 603 ICPNEATWNVLVRA 616



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 182/380 (47%), Gaps = 6/380 (1%)

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ-H 246
           AGD++     L ++   G +       + I    + G  +RA   F +  +LG       
Sbjct: 64  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 123

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  L+  L +  +       Y+ M+  GV P++YTYN LI   C   +V    K+ DEM
Sbjct: 124 VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 183

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +    + V++ T++ G+CK  RV+EA   L     A   P   +YN ++   C     
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQASYNAVVHALCGEFRM 238

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            + F + N++   G  P+VVTY  ++ AF KA   +MA  ++  M   G TP+ +T+T L
Sbjct: 239 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 298

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +  F     +  A  M+  M   G++P   +Y VLI GLC  G++K A   FNSM    L
Sbjct: 299 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 358

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN   Y+ ++ G+   G+   A+ +  EM   G  PN+  Y++ I VLC+   + +AE 
Sbjct: 359 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 418

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L+++ML     P+   +N L
Sbjct: 419 LIDKMLMDNCPPNTVTFNTL 438



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 220/464 (47%), Gaps = 13/464 (2%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVR-PRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           + I A  ++  +D+AL  F++  D G R P    +N LL  +++          +   R 
Sbjct: 91  AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 150

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             V+ +VY++ +LI+  C+   ++ A ++L+++   G  P+ V + +++ G CK G +E 
Sbjct: 151 AGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEE 210

Query: 229 AKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           A+    +      V  Q +Y  ++   CG F+     + F    +M   G+ P++ TY  
Sbjct: 211 ARGFLAET-----VPVQASYNAVVHALCGEFR---MWEVFSVVNEMVQRGLQPNVVTYTT 262

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++  +C   ++     +   M       NV+T+  L+ G  ++ +V +A  +   M   G
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +P+ I+YN LI G C  G+   A   FN +K N   P+  TY+ L+  FS AG+   A 
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +  EM+  G  P+ V YT +ID   +    ++A  +   M      P+  T+  LI  L
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 442

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G +  A  +F+ M      PND  YN ++ G  +EGN   A  ++ EM   G   ++
Sbjct: 443 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 502

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y++ I  LCQ      A +LL +M+  G++P    +N +  A
Sbjct: 503 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 25/370 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA  K+R    A     +M+  G  P   TF +L+          KG  FF + +
Sbjct: 260 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV----------KG--FFEDGK 307

Query: 169 CKVELDVY-------------SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
               L ++             S+ +LI+G C  GDL  A +  N ++     PN   Y++
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 367

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           L+DG    GD++ A +++ ++   G       YT +I  L K  +        +KM ++ 
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P+  T+N LI   C+ G+V     +F  MR      N  TYN L+ GL +E   ++A 
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            ++ +M   G   +++TYN +I+  C       A  L  ++   G  P   T+N +I A+
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G   +A+ L+ +M       + V YTILI        +  A      M   G  P+ 
Sbjct: 548 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607

Query: 456 YTYGVLIHGL 465
            T+ VL+  +
Sbjct: 608 ATWNVLVRAI 617



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 11/314 (3%)

Query: 263 DGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC---NVVTY 318
           DG ++  ++M+L GV+ +       I  +   G      K F   R  ++ C    V  Y
Sbjct: 68  DGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTF--YRASDLGCRDPGVRVY 125

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  L +E  V     + D M+ AG+ PNV TYN LI   C     D A ++ +++  
Sbjct: 126 NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 185

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P  V++  ++    K G  + A   + E       P + +Y  ++ +      M +
Sbjct: 186 KGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWE 240

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            F + + M + G  P+V TY  ++   C    ++ A  +   M      PN + +  ++ 
Sbjct: 241 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 300

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+ ++G  + AL +   M ++G  P+  SY+  I  LC  G    A    N M +  L P
Sbjct: 301 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 360

Query: 559 SVSLYNILYRAKNN 572
           + + Y+ L    +N
Sbjct: 361 NATTYSTLVDGFSN 374



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 41/226 (18%)

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   S   +   +R  + AG+       ++EM  RG+  +E      I +F R+   ++A
Sbjct: 46  GSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRA 105

Query: 440 FE------------------------------------MYSLMQKSGFSPDVYTYGVLIH 463
            +                                    +Y  M+K+G  P+VYTY +LI 
Sbjct: 106 LKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIR 165

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            LC    +  A K+ + M      P++V +  ++ G CK G    A   L E      VP
Sbjct: 166 ALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VP 220

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ASY++ +  LC + +  E   ++N+M++ GL+P+V  Y  +  A
Sbjct: 221 VQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 1/154 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
            R Y  ++    +      A     +ML++G      T+N+++  + + C      L   
Sbjct: 467 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 526

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
               + ++ D ++F  +I   C+ G ++ A  +L Q+  +    NVV YT LI   C  G
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 586

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            +  A +   K+   G+   + T+ VL+  +F N
Sbjct: 587 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/582 (27%), Positives = 267/582 (45%), Gaps = 60/582 (10%)

Query: 43  TPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS-----------SSFTPRSLLCH 91
            P   S  LRLL   + S +HA+A      ++S R+++           S  + R L+  
Sbjct: 64  APLPASSALRLL-QHILSDTHASASRHAEDLLSPRVSTLLLPSLVADGASLPSARRLISR 122

Query: 92  LTQLFP---------SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
           L    P          S    T   L  + +++     LS  A   F ++   G  P   
Sbjct: 123 LLFFNPLSVAAAAIADSDCTATADLLVRACLNSPAPGSLSCAA-DAFLELSTRGASPSIK 181

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           T N L+  +      D     F E R    V  DVY++ ++IK  C AG+++ AF +L +
Sbjct: 182 TCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAE 241

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           LE  G  P VV Y  L+D  C++G +E A  L  ++ E  L  +  T+ +LI GL +   
Sbjct: 242 LERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQR 301

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
             +     ++M+  G++P+   YN LI  +C EG  SE  +LFDEM  + +   VVTYN 
Sbjct: 302 FGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNL 361

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGIS--------------------------------- 347
           +   LCKE  ++ AE++LD+M +AG++                                 
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVAR 421

Query: 348 ---PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              PN       I   C  G+ ++A  ++  +   G   ++ T N LI    +  N K A
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEA 481

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
           + +++ M + G+    +TY I+I    ++  ME+A ++   M K GF PD++T+   +  
Sbjct: 482 TKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRA 541

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G +++   L + M    L+P+ V Y  +I GYCK  + ++A + L E+ + GL PN
Sbjct: 542 YCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPN 601

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              Y++ IG   ++G   +A  +L+ M   G++P+   YN L
Sbjct: 602 AVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL 643



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 202/437 (46%), Gaps = 12/437 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I  H +     +AL  F +M+  G++    T+N +   + K    +       E 
Sbjct: 323 IYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM 382

Query: 168 -------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                   C +   V ++ +  +G    G L+    ++ ++      PN  + T+ I   
Sbjct: 383 LLAGMTVHCSLFNSVVAWHL--RG---TGRLDVVLRLIREMVARFLKPNDAVMTACIQEL 437

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G  E A  ++  +   GL     T   LI GL +    K+  +  + M  +GV    
Sbjct: 438 CKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDR 497

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TYN +I   C   K+ E  +L D+M  R    ++ T+NT +   C   +V++   LLDQ
Sbjct: 498 ITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQ 557

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           MK  G+ P+++TY  +IDG+C A +  KA +   +L  NG  P+ V YN LI  + + G+
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++  M+  GI P+ +TY  L+     +  +E+A E+++          V  Y +
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI 677

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I G C  G + EA   F  M    + PN + Y  +++ YCK GN   A +L  EM   G
Sbjct: 678 IIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG 737

Query: 521 LVPNIASYSSTIGVLCQ 537
           +VP+  SY++ I   C+
Sbjct: 738 IVPDTVSYNTLISGCCE 754



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 226/532 (42%), Gaps = 76/532 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FS 165
           Y  +I A  ++   D A     ++  SG++P   T+N L+  + +S   ++ +       
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E R +    + +FGILI G        +   VL ++E  G +PN VIY  LI   C+ G 
Sbjct: 279 EGRLRPS--IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGH 336

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-------- 277
              A  LF ++   G+  T  TY ++   L K G  +   +  ++M L G++        
Sbjct: 337 CSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNS 396

Query: 278 ----------------------------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
                                       P+       I E C  GK  E  +++  +  +
Sbjct: 397 VVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGK 456

Query: 310 EVACNVVTYNTLICGL-----------------------------------CKEMRVQEA 334
            +  N+ T N LI GL                                   CK  +++EA
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +L D M   G  P++ T+N  +  +C+ G+ +    L +Q+KS G  P +VTY  +I  
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           + KA +   A+  + E+ + G+ P+ V Y  LI  + R+  +  A  +   M+ +G  P 
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             TY  L++ +C  G ++EA ++F       +E   + Y ++I G+CK G    A+    
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EM+ + + PN  +Y++ +   C+ G   EA  L ++M+  G+ P    YN L
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG----WLFF 164
           Y  +I    K+   ++A+     M+  G +P   TFN+   F+   C+  K      L  
Sbjct: 500 YNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNT---FLRAYCNLGKVEDILHLLD 556

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 ++ D+ ++G +I G C+A D++KA + L +L + G  PN VIY +LI G  +NG
Sbjct: 557 QMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNG 616

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A  +   +   G+  T  TY  L+  +   GL ++  E + +  L  +   +  Y 
Sbjct: 617 SISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYT 676

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I  +C  GK+ E    F EM +R++  N +TY TL+   CK    +EA +L D+M  +
Sbjct: 677 IIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSS 736

Query: 345 GISPNVITYNKLIDGFCDAGETDK 368
           GI P+ ++YN LI G C+    DK
Sbjct: 737 GIVPDTVSYNTLISGCCEVDSLDK 760



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  II    K    D+A+ YF +M    +RP   T+ +L+    K  + ++ +  F E  
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFE 196
              +  D  S+  LI GCCE   L+K  E
Sbjct: 735 SSGIVPDTVSYNTLISGCCEVDSLDKIVE 763


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 273/559 (48%), Gaps = 8/559 (1%)

Query: 12  LTLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
           +T ++  R+   P L+  S   +      QH+  S+   L+  L  +S    A     + 
Sbjct: 54  ITPHVTYRVLSQPILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMK 113

Query: 72  KIISGRITSSSFT-PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
            I++G +T S    P S +  L   F S         L+    D    +RL D+ +  + 
Sbjct: 114 SILNGLVTDSDIECPVSSIVDLVDEFESHFVEKFCDMLFRVCSD----NRLFDETIRVYD 169

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEA 188
            + + G+     +   LL+ + +    D    FF       K E+ V S  ++I   C  
Sbjct: 170 YVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRR 229

Query: 189 GDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           G++ KA E+++++   G   PNV  Y +L++      D +    + + + +  +V +  T
Sbjct: 230 GEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVAT 289

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y++LI     +G  ++  + +E+M+   +   +Y Y+ +I      G +   F LFDEM 
Sbjct: 290 YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R++  N  TY  LI G+CK  +++ AE LL +M+  G+  N++ +N  +DG+C  G+ D
Sbjct: 350 QRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMD 409

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A RL   ++  G +  V TYN+L     K      A  ++  M E+G+ P+ VT+T+ I
Sbjct: 410 EALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFI 469

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + + +  ++ +A  ++  M+K G  P++ TY  LI   C K  +K+A K+ + M    L 
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   Y+ +I G C  G    AL+L  EM  KG+  N+A+Y+S I  L ++G+  EA  L
Sbjct: 530 PDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            ++M+K+GL P   ++  L
Sbjct: 590 YDEMMKIGLIPDDRVFTSL 608



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 204/393 (51%), Gaps = 2/393 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRC 169
           +ID   +    ++A     +M+  G V+P   T+N+LL  +V +        +     + 
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +V   V ++ ILI+    +GD+ +A ++  ++ E     +V +Y+S+I    + G+++RA
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRA 341

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++ +  +V   HTY  LI G+ K G  +       +MQ  GV  +L  +N  +  
Sbjct: 342 FALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDG 401

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  GK+ E  +L   M  + +  +V TYN L  GLCK  R  EA+ +L+ M   G+ PN
Sbjct: 402 YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPN 461

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+T+   I+ +C  G   +A RLF  ++  G+ P+++TYN LI A+ K    K A  +  
Sbjct: 462 VVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKS 521

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +G+ P   TY+ LI        +++A ++++ M+  G + +V TY  +I GL  +G
Sbjct: 522 EMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEG 581

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              EA KL++ M +  L P+D V+  ++  + K
Sbjct: 582 RADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 226/459 (49%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + SI+    K R  D+AL  F  M      P S+T+N ++  +  +   ++ ++   E  
Sbjct: 360 FNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEME 418

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++ +  I++   C+A     A+E+     + G +PN V Y SLIDG  K G+++
Sbjct: 419 HAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVD 478

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  + + G  A    YT LI   F +G ++DG + +++M   G  P L   N  +
Sbjct: 479 DAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYM 538

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G V +G  +F++++      +V +Y+ LI GL K  + +E   +   MK  G +
Sbjct: 539 DCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA 598

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +   YN ++DGFC +G+ DKA+ +  ++K     P+V TY  +I   +K      A  L
Sbjct: 599 LDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYML 658

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E + +GI  + + Y+ LID F +   +++A+ +   M K G +P+VYT+  L+  L  
Sbjct: 659 FEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 718

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA   F SM E K  PN   Y+++I G C+     +A     EM ++GLVPN+ +
Sbjct: 719 AEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVT 778

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I  L + G   +A  L  +    G  P  + +N L
Sbjct: 779 YTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 228/493 (46%), Gaps = 35/493 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A  ++R  ++AL    QM + G       F +L+  + +    +       E +
Sbjct: 185 YTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK 244

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D+  + + I    +AG+++ A++  ++L+  G  P+ V YTS+I   CK G + 
Sbjct: 245 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLS 304

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY------ 281
            A+ LF ++     V   + Y  +I G    G  ++ ++  ++++  G  PS+       
Sbjct: 305 EAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSIL 364

Query: 282 ----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                       TYN +I   C  GKV E + + DEM H  +  
Sbjct: 365 TCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFP 424

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N++T N ++  LCK  + + A  + +     G +PN +TY  LIDG    G  D A+RLF
Sbjct: 425 NLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLF 484

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G + + V Y  LIR F   G  +    + +EM  RG  P        +D   ++
Sbjct: 485 ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D+EK   ++  ++  GF PDV +Y +LIHGL   G  +E S +F++M +     +   Y
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++ G+CK G   +A  +L EM  K + P +A+Y S I  L +  +  EA +L  +   
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664

Query: 554 LGLKPSVSLYNIL 566
            G++ +V +Y+ L
Sbjct: 665 KGIELNVIVYSSL 677



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 215/468 (45%), Gaps = 40/468 (8%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF- 164
           S  Y  IID    +   ++A     +M  +G+ P   T N ++  + K+  F+  +  F 
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 165 --SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID---- 218
             S+  C    +  ++  LI G  + G+++ A+ +   + + G + N V+YTSLI     
Sbjct: 451 TASQRGCNP--NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFM 508

Query: 219 -----------------GC------------C--KNGDIERAKMLFRKIGELGLVATQHT 247
                            GC            C  K GD+E+ + +F  I   G +    +
Sbjct: 509 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 568

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y++LI GL K G  ++    +  M+  G +     YN ++  +C  GK+ + +++ +EM+
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK 628

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V   V TY ++I GL K  R+ EA  L ++ K  GI  NVI Y+ LIDGF   G  D
Sbjct: 629 VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 688

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A+ +  ++   G +P+V T+N L+ A  KA     A    + M+E   +P+  TY+ILI
Sbjct: 689 EAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 748

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   R     KAF  +  MQK G  P+V TY  +I GL   GN+ +A  LF         
Sbjct: 749 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGT 808

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           P+   +N +I G      +  A  +  E   KG   N+ +  S +  L
Sbjct: 809 PDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 195/436 (44%), Gaps = 41/436 (9%)

Query: 172 ELDVYSFGI-------LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E+ V  +G+       L+        L+ A  V+  +  + F P    YT LI    +  
Sbjct: 137 EMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEAR 196

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ERA  L R++ E+G       +T L+  L + G  +      ++++ + + P +  YN
Sbjct: 197 QPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYN 256

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             I  +   G V   +K F E++ + +  + V+Y ++I  LCK  R+ EAE L  QM+  
Sbjct: 257 VCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETE 316

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV------------------ 386
              P    YN +I G+  AG+ + A++L +QLK  G  PSVV                  
Sbjct: 317 RAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEA 376

Query: 387 ----------------TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                           TYN++I     AG  + A  +  EME  G+ P+ +T  I++D  
Sbjct: 377 LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   E A+EM+    + G +P+  TY  LI GL  KGN+ +A +LF +M +T    N 
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           VVY  +I  +   G      ++  EMN +G  P++   ++ +  + + G   +   +   
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 551 MLKLGLKPSVSLYNIL 566
           +   G  P V  Y+IL
Sbjct: 557 IKGYGFLPDVRSYSIL 572



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 3/380 (0%)

Query: 190 DLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           DL    +VL ++  +G+  PN      L+    +   ++ A+ +   +  L        Y
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPAC-ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAY 185

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           TVLI  + +    +   E   +MQ  G    +  +  L+     EG+V     L DE++ 
Sbjct: 186 TVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG 245

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  ++V YN  I    K   V  A +   ++K  G+ P+ ++Y  +I   C AG   +
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  LF Q+++    P    YN +I  +  AG  + A  L+ +++ERG  PS V++  ++ 
Sbjct: 306 AEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILT 365

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +   +++A  ++  M+K    P+  TY ++I  LCM G ++EA  + + M    L P
Sbjct: 366 CLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFP 424

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N +  N+M+   CK      A  +    +++G  PN  +Y S I  L + G   +A  L 
Sbjct: 425 NLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLF 484

Query: 549 NQMLKLGLKPSVSLYNILYR 568
             ML  G   +  +Y  L R
Sbjct: 485 ENMLDTGHNANPVVYTSLIR 504



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 162/333 (48%), Gaps = 1/333 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSE 166
           L  + +D   K+   ++    F  +   G  P   +++ L+  + K+  + +   +F + 
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM 592

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +    LD  ++  ++ G C++G L+KA+EVL +++     P V  Y S+IDG  K   +
Sbjct: 593 KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRL 652

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E+M   G++P++YT+N L
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       +++E    F  M+  + + N  TY+ LI GLC+  +  +A     +M+  G+
Sbjct: 713 MDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+TY  +I G    G    A  LF + K+NG +P   ++N LI   S A  +  A  
Sbjct: 773 VPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYH 832

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           +  E   +G   +      L+D+  +++ +E+A
Sbjct: 833 VFEETRLKGCRINVKACISLLDALNKAECLEQA 865


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 189/389 (48%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + +LI G C  GD+ +   +L ++E  G  P VV Y ++I    +  D+ + + L  ++ 
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E GL      Y  +I  L K            +M  +   P + T+N LI  +C EG V 
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KL  E   RE+  N ++Y  LI G C    V  A  LL +M   G +P+V+T   LI
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G   +G+ D+A  +  ++      P    YNVLI    K      A +L+ EM E+ + 
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P +  YT LID F+RSD +  A +++  M++ G   D+  Y  +I G C  G M EA   
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            +SM +    P++  Y  +I GY K+G+   ALR L +M ++   PNI +Y+S I   C 
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCN 673

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G    AEVL   M   GL P+V  Y +L
Sbjct: 674 IGNTDSAEVLFASMQSEGLFPNVVHYTVL 702



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 209/480 (43%), Gaps = 16/480 (3%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GW 161
           V  +  Y  +ID + +     + L    +M   G+ P   T+ +++ ++ +     K   
Sbjct: 308 VPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIES 367

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L +      +  +V  +  +I   C+    ++A  VLNQ+    F P+VV + +LI   C
Sbjct: 368 LLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFC 427

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + GD+E A  L R+     L   Q +YT LI G    G      +   +M   G +P + 
Sbjct: 428 REGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVV 487

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T   LIH     G+V E   + ++M  R+V  +   YN LI GLCK+  +  A+ LL +M
Sbjct: 488 TLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               + P+   Y  LIDGF  + +   A ++F  ++  G    +V YN +I+ + K+G  
Sbjct: 548 LEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMM 607

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A   +  M + G  P E TYT LID + +  D++ A      M K    P++ TY  L
Sbjct: 608 NEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASL 667

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G C  GN   A  LF SM    L PN V Y ++I    K+  + +A      M     
Sbjct: 668 ICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHC 727

Query: 522 VPNIASYSSTIGVL-----------CQDGKWPEAEVLLNQMLK----LGLKPSVSLYNIL 566
            PN A+    +  L           C D      +  L  + K     GL P +S YN +
Sbjct: 728 SPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAI 787



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 214/457 (46%), Gaps = 19/457 (4%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y ++I A  K R + QAL   +QM+ S   P   TFN+L+    +    ++      E
Sbjct: 382 QIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLRE 441

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R ++E +  S+  LI G C  G++  A ++L ++   G +P+VV   +LI G   +G 
Sbjct: 442 AIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQ 501

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A M+  K+ E  ++   + Y VLI GL K  +         +M    V P  + Y  
Sbjct: 502 VDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTT 561

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +    K+S+  K+F+ M  +    ++V YN +I G CK   + EA   +  M+  G
Sbjct: 562 LIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVG 621

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY  LIDG+   G+   A R    +      P++VTY  LI  +   GN+  A 
Sbjct: 622 CIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAE 681

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   M+  G+ P+ V YT+LI S  + D   +A   +  M  +  SP+  T   L++GL
Sbjct: 682 VLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741

Query: 466 --CMKG-------NMKEASK------LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             C  G       +  +A K      +F  +    L+P    YN +IF  C+     +A+
Sbjct: 742 TNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAM 801

Query: 511 RLLGEMNEKGLVPNIASYSSTI---GVLCQDGKWPEA 544
            L  +M+ KG +P+  ++ S +     + + GKW  A
Sbjct: 802 ELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSA 838



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 176/362 (48%), Gaps = 3/362 (0%)

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           ++ G C  G +E  + L       G V     Y VLI G  + G    G     +M++ G
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + P++ TY  +IH    +  +++   L  EM+ R ++ NV  YNT+I  LCK     +A 
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            +L+QM  +   P+V+T+N LI  FC  G+ ++A +L  +       P+ ++Y  LI  F
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
              G   +ASDL+ EM  RG TP  VT   LI   V S  +++A  +   M +    PD 
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
             Y VLI GLC K  +  A  L   M E K++P+  VY  +I G+ +      A ++   
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL---YRAKNN 572
           M EKG   +I +Y++ I   C+ G   EA + ++ M K+G  P    Y  L   Y  K +
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 573 IE 574
           I+
Sbjct: 642 IK 643



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 163/327 (49%)

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           A  ++  V++ GL   G  ++G    E     G  P    YN LI  YC  G V  G  L
Sbjct: 274 ADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLL 333

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM  + +   VVTY  +I  L ++  + + E LL +MK  G+SPNV  YN +I   C 
Sbjct: 334 LGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK 393

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
                +A  + NQ+ ++   P VVT+N LI AF + G+ + A  L+RE   R + P++++
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT LI  F    ++  A ++   M   G +PDV T G LIHGL + G + EA  +   M 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           E ++ P+  +YN++I G CK+     A  LL EM E+ + P+   Y++ I    +  K  
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A  +   M + G    +  YN + + 
Sbjct: 574 DARKIFEFMEEKGGYRDIVAYNAMIKG 600



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 301 KLFDEM--RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
           +L+ EM  R RE   +  +   ++ GLC E RV+E  RL++     G  P  + YN LID
Sbjct: 260 RLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLID 319

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+C  G+  +   L  +++  G  P+VVTY  +I    +  +      L+ EM+ERG++P
Sbjct: 320 GYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSP 379

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +   Y  +I +  +     +A  + + M  S F PDV T+  LI   C +G+++EA KL 
Sbjct: 380 NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLL 439

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
                 +LEPN + Y  +I G+C  G    A  LL EM  +G  P++ +  + I  L   
Sbjct: 440 REAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVS 499

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+  EA ++  +M +  + P  ++YN+L
Sbjct: 500 GQVDEALMVREKMAERQVMPDANIYNVL 527



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 148/379 (39%), Gaps = 60/379 (15%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGIL 181
           D+AL    +M +  V P +N +N L+  + K            E    KV+ D + +  L
Sbjct: 503 DEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTL 562

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G   +  L+ A ++   +EE G   ++V Y ++I G CK+G +  A M    + ++G 
Sbjct: 563 IDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGC 622

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +  + TYT LI G  K G  K    F   M      P++ TY  LI  YCN G       
Sbjct: 623 IPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEV 682

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM------------------ 343
           LF  M+   +  NVV Y  LI  L K+ +  +A    + M +                  
Sbjct: 683 LFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLT 742

Query: 344 --------------------------------AGISPNVITYNKLIDGFCDAGETDKAFR 371
                                            G+ P +  YN +I   C      KA  
Sbjct: 743 NCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAME 802

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNS-KMASDLVREMEERGITPSEVT--YTILID 428
           L  ++ + G  P  VT+  L+  FS  G S K  S L  E ++      E+   Y  L++
Sbjct: 803 LKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEF---EIICKYMTLLN 859

Query: 429 SFVRS---DDMEKAFEMYS 444
             V S   D++ +  ++Y+
Sbjct: 860 QHVMSPVRDEVSRVLQLYA 878



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 38/267 (14%)

Query: 338 LDQMKMAGISPN-----------------------VITYNKLIDGFCDAGETDK------ 368
           L  M +AG++P                              L     DA   ++      
Sbjct: 191 LRSMSLAGVTPTRGSLGALAAAYADAGMEAKAAEACARARDLHGALPDAPHCNRLLRLLV 250

Query: 369 -------AFRLFNQLKSNGQSPSVVTYN--VLIRAFSKAGNSKMASDLVREMEERGITPS 419
                  A RL+ ++ +  +      Y+  V++R     G  +    L+      G  P 
Sbjct: 251 DRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPG 310

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V Y +LID + R  D+ +   +   M+  G  P V TYG +IH L  K ++ +   L  
Sbjct: 311 AVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLW 370

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M E  L PN  +YN +I+  CK  ++ +AL +L +M      P++ ++++ I   C++G
Sbjct: 371 EMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREG 430

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              EA  LL + ++  L+P+   Y  L
Sbjct: 431 DVEEALKLLREAIRRELEPNQLSYTPL 457


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 225/459 (49%), Gaps = 3/459 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           +++  +A+  F+Q+     +P +  +NS++I +I    ++K    ++E  N      D  
Sbjct: 172 AKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTV 231

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C+ G  + A  +LN+++E G  P   IYT +I    K  ++  A  LF ++
Sbjct: 232 TYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM 291

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             +       TYT LI GL K G   + + FY +MQ     P     N +I+     G++
Sbjct: 292 RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRL 351

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
            +G KLF+EM       NVVTYNT+I  L + + RV E     ++MK +GISP+  TY+ 
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSI 411

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGFC     +KA  L  ++   G  P    Y  LI A  KA    +A +L +E++E  
Sbjct: 412 LIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            + S   Y ++I    ++  ++ A  ++  M K G +P+VY Y  L+ GL     + EA 
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                M E    P+   YN+++ G  K G  +RA+ +L  M    + P+  SY++ +  L
Sbjct: 532 TTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSAL 591

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 592 SHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVD 630



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 21/246 (8%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILR------------LLLSKMSSHSHAAAQTLILKII 74
           + FS F      G+  +P + SI++             +LL +M              +I
Sbjct: 389 EVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLI 448

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
                +  +    L C L Q    +    + +R+Y  +I    K+   D A+  F +M  
Sbjct: 449 DALGKAKRY---DLACELFQELKENCGS-SSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGCCEAGDL 191
            G  P    +N+L+  + ++C  D+         E+ C    D+ S+ I++ G  + G  
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP--DINSYNIILNGLAKTGGP 562

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++A E+L  ++     P+ V Y +++      G  E A  L +++  LG      TY+ +
Sbjct: 563 HRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSI 622

Query: 252 ICGLFK 257
           +  + K
Sbjct: 623 LEAIGK 628


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 46/475 (9%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFGILIK-- 183
           M+  G RP ++ FN +++     C   KG+L  +E+   V      E DVY++ ILI   
Sbjct: 269 MIRDGPRPCNHNFNIMIL-----CFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAY 323

Query: 184 -------------------GC--------------CEAGDLNKAFEVLNQLEEMGFSPNV 210
                              GC              C  G++ +A ++   ++E+G SPNV
Sbjct: 324 RIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
            +Y +L+ G  K  D+ +A ML+ ++ + G+     T+ +L+ G +K G + D +E +  
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
             L+ + P    Y+  +   C  G++ E  +  ++M  + +  +VV +N++I    +   
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
              A +    M M G+ P+  T + ++ G    G   +A  L  ++   G   + V + V
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTV 563

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  + K G++  A  L  EME RGI P  + ++  ID   ++  +E+A+E +S M K G
Sbjct: 564 LLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKG 623

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           F P+ + Y  LIHGLC  G + EA KL   M +  L P+    N++I G+CKEG    A 
Sbjct: 624 FVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAF 683

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
               EM+  G+ P+  +Y++ IG  C+      A+  LN+M   G  P ++ YNI
Sbjct: 684 DAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNI 738



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 215/461 (46%), Gaps = 3/461 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSE 166
           +Y +++  + K+R   QA   + +M D G+ P   TFN L+    K     D   LF   
Sbjct: 385 MYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDW 444

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +   +  D   + + + G C AG L++A + L  + E G  P+VV + S+I    + G  
Sbjct: 445 SLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFE 504

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A   ++ +   GLV +  T + ++ GL K G  ++  +   KM   G+  +   +  L
Sbjct: 505 DNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVL 564

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  Y   G  +    L+ EM  R +  + + ++  I GL K   V+EA     +M   G 
Sbjct: 565 LDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGF 624

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN   YN LI G C+ G+  +A +L  +++  G  P + T N++I  F K G  K A D
Sbjct: 625 VPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFD 684

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              EM   G+TP  VTY  LI  + +  DM  A E  + M  SG+ PD+ TY + I G C
Sbjct: 685 AFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFC 744

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               +  A  + + +    + PN V YN M+   C +    RA+ L  ++ +   VPN+ 
Sbjct: 745 SSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLD-RAMVLTAKLLKMAFVPNVV 803

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           + +  +   C+ G  PE  ++  Q L   L+     Y ++Y
Sbjct: 804 TTNVLLSHFCKQGM-PEKALIWGQKLNKLLRADFIGYWLVY 843



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 200/460 (43%), Gaps = 70/460 (15%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +  IL +     GD    +++L  +   G  P    +  +I   C+ G +  A+ L   +
Sbjct: 245 AISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVM 304

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            +       + Y +LI      G   D   F   M  NG  PSL T++ +I  +CNEG V
Sbjct: 305 PKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNV 364

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  K+F+ ++   ++ NV  YNTL+ G  K   V +A  L ++M+  GI+P+  T+N L
Sbjct: 365 VEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNIL 424

Query: 357 -----------------------------------IDGFCDAGETDKAFRLFNQLKSNGQ 381
                                              + G C AG+ D+A +    +   G 
Sbjct: 425 VAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGM 484

Query: 382 SPSVVTYNVLIRAFSKA-----------------------------------GNSKMASD 406
            PSVV +N +I A+S+A                                   G  + A D
Sbjct: 485 PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARD 544

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ +M ++G+  ++V +T+L+D + +  D   A  ++  M+  G  PD   +   I GL 
Sbjct: 545 LLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLS 604

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++EA + F+ M +    PN+ VYN +I G C  G  + AL+L  EM +KGL+P+I 
Sbjct: 605 KAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIF 664

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +  I   C++G+   A     +M  +G+ P    YN L
Sbjct: 665 TTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTL 704



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 194/386 (50%), Gaps = 18/386 (4%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S S+ V    LY+  +     +   D+A+ +   ML+ G+ P    FNS++    ++   
Sbjct: 445 SLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAG-- 502

Query: 158 DKGWLFFSENRCKVELDVYSFGI---------LIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
                 F +N  K    +  FG+         ++ G  + G L +A ++L ++ + G   
Sbjct: 503 ------FEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPV 556

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N V +T L+DG  K GD   A  L+ ++   G+      ++  I GL K GL ++ +E +
Sbjct: 557 NKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAF 616

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +M   G  P+ + YN LIH  CN GK+ E  KL  EMR + +  ++ T N +I G CKE
Sbjct: 617 SEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE 676

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R++ A     +M   G++P+ +TYN LI G+C   +   A    N++ ++G  P + TY
Sbjct: 677 GRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTY 736

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N+ I+ F  +     A  ++ E+   G+ P+ VTY  ++++ V +D +++A  + + + K
Sbjct: 737 NIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAMVLTAKLLK 795

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEA 474
             F P+V T  VL+   C +G  ++A
Sbjct: 796 MAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 35/292 (11%)

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           H +   +    NTL+ G        E+  +L +M+  G+ P+    + L       G+  
Sbjct: 201 HHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYG 260

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
             ++L   +  +G  P    +N++I  F + G  ++A  L+  M +    P    Y ILI
Sbjct: 261 SVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILI 320

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +++        A     LM K+G  P + T+  +I   C +GN+ EA K+F  + E  L 
Sbjct: 321 NAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLS 380

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG--------------------------- 520
           PN  +YN ++ GY K  +  +A  L  EM +KG                           
Sbjct: 381 PNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYEL 440

Query: 521 --------LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                   LVP+ + Y  ++  LC  G+  EA   L  ML+ G+ PSV  +N
Sbjct: 441 FRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN 492


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 203/388 (52%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++ G    G L++  ++LN +   G SPN  I+        K G I++A  +F K+ + G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L     +Y  LI  L K G   D    + +M   GV+P++  ++ L++  C+  K  +  
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +LF EM +  +  N+V +NT++C LCKE RV E +RL+D ++  G+ P+VI+YN LIDG 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C AG  D+A +L   + S G  P+  +YN L+  + KAG    A  L R+M   GITP  
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  ++    ++    +A E+Y  M  SG    +YTY  +++GLC    + EA K+F S
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           +    L+ N + + +MI    K G    A+ L   +   GLVP++ +Y      L ++G 
Sbjct: 301 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGS 360

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
             E + L + M K G  P+  + N L R
Sbjct: 361 LEEFDSLFSAMEKNGTAPNSQMLNALVR 388



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 188/374 (50%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F I      + G ++KA ++ N++ + G SP+ V Y +LID  CK G ++ A++ F ++ 
Sbjct: 33  FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+      ++ L+ GL      +   E + +M   G+ P++  +N ++   C EG+V 
Sbjct: 93  NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 152

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           EG +L D +    V  +V++YNTLI G C    + EA +LL+ M   G+ PN  +YN L+
Sbjct: 153 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLL 212

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G+C AG  D A+ LF ++ SNG +P VVTYN ++    +      A +L   M   G  
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 272

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
               TY  +++   +S+ +++AF+M+  +   G   ++ T+ ++I  L   G  ++A  L
Sbjct: 273 WGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 332

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F ++    L P+ V Y ++     +EG+      L   M + G  PN    ++ +  L  
Sbjct: 333 FAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 392

Query: 538 DGKWPEAEVLLNQM 551
            G    A   L+++
Sbjct: 393 RGDISRAGAYLSKL 406



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 203/417 (48%), Gaps = 1/417 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M+ +G+ P  + FN       K    DK    F++ R   +  D  S+G LI   C+ G 
Sbjct: 21  MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A    NQ+   G +PN+V+++SL+ G C     E+ + LF ++  +G+      +  
Sbjct: 81  VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++C L K G   +G    + ++  GV P + +YN LI  +C  G + E  KL + M    
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  N  +YNTL+ G CK  R+  A  L  +M   GI+P V+TYN ++ G        +A 
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L+  + ++G    + TYN ++    K+     A  + + +  +G+  + +T+TI+I + 
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           ++    E A ++++ +  +G  PDV TY V+   L  +G+++E   LF++M +    PN 
Sbjct: 321 LKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 380

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            + N ++      G+  RA   L +++E+      ++ S  I +   D     A+ L
Sbjct: 381 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 437



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 197/425 (46%), Gaps = 50/425 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++IDA  K    D A   F+QM++ GV P    F+SL   V   CS DK W     LF
Sbjct: 68  YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSL---VYGLCSIDK-WEKVEELF 123

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  ++  F  ++   C+ G + +   +++ +E MG  P+V+ Y +LIDG C  
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 183

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A  L       G+V+                               G+ P+ ++Y
Sbjct: 184 GTIDEASKLLE-----GMVSV------------------------------GLKPNSFSY 208

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+H YC  G++   + LF +M    +   VVTYNT++ GL +  R  EA+ L   M  
Sbjct: 209 NTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 268

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           +G    + TYN +++G C +   D+AF++F  L S G   +++T+ ++I A  K G  + 
Sbjct: 269 SGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 328

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL   +   G+ P  VTY ++ ++ +    +E+   ++S M+K+G +P+      L+ 
Sbjct: 329 AMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 388

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA------LRLLGEMN 517
            L  +G++  A    + + E          +M+I  +  +   + A       R+L E N
Sbjct: 389 RLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEAN 448

Query: 518 EKGLV 522
              L+
Sbjct: 449 SSALI 453



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 37/339 (10%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  NG+SP+ + +N     Y   G + +   +F++MR   ++ + V+Y  LI  LCK  R
Sbjct: 21  MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +AE   +QM   G++PN++ ++ L+ G C   + +K   LF ++ + G  P++V +N 
Sbjct: 81  VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           ++    K G       LV  +E  G+ P  ++Y  LID    +  +++A ++   M   G
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF------------ 498
             P+ ++Y  L+HG C  G +  A  LF  M    + P  V YN ++             
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260

Query: 499 -----------------------GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                                  G CK      A ++   +  KGL  NI +++  IG L
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            + G+  +A  L   +   GL P V  Y ++  A+N IE
Sbjct: 321 LKGGRKEDAMDLFAAIPANGLVPDVVTYRVV--AENLIE 357


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 236/460 (51%), Gaps = 3/460 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDV 175
           K+++ ++AL  F+Q+     +P SNT+NS+++ +++    +K    ++E  N      D 
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  LI    + G  + A  + ++++E G  P   IYT+++    K G +E+A  L ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E G   T +TYT LI G+ K G  ++ +  +  M   G  P +   N LI+     G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYN 354
           +++  KLF+EM   +   NVVTYNT+I  L + + R  EA    ++MK  G+ P+  TY+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDGFC     +KA  L  ++   G +P    Y  LI A  KA   + A++L +E+ E 
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               S   Y ++I    +   + +A ++++ M+K G +PDVY Y  L+ G+   G   EA
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L  +M E    P+   +N+++ G+ + G    A+ +   M    + P++ SY++ +G 
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           L + G + EA  L+ +M   G +  +  Y+ +  A   I+
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 191/388 (49%), Gaps = 2/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GEL 239
           ++K   +A  +NKA  +  Q++     P    Y S+I    + G  E+   L+ ++  E 
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
             +    TY+ LI    K G        +++M+ NG+ P+   Y  ++  Y   G+V + 
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM+ +  A  V TY  LI G+ K  +V+EA  +   M   G  P+V+  N LI+ 
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA-FSKAGNSKMASDLVREMEERGITP 418
              AG    A +LF +++S   +P+VVTYN +I+A F     +  A     +M+E G+ P
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S  TY+ILID F +++ +EKA  +   M + GF+P    Y  LI+ L      + A++LF
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             + E     +  VY +MI    K G    A+ L  EM + G  P++ +Y++ +  + + 
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRV 524

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G   EA  LL  M + G  P ++ +NI+
Sbjct: 525 GMTDEAHSLLRTMEENGCTPDLNSHNII 552



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 160/329 (48%), Gaps = 2/329 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I    K+   ++A   F  ML  G +P     N+L+  + K+         F E  
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEME 362

Query: 168 RCKVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +   +V ++  +IK   E+    ++AF    +++E G  P+   Y+ LIDG CK   +
Sbjct: 363 SLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRV 422

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A +L  ++ E G       Y  LI  L K    +   E +++++ N    S   Y  +
Sbjct: 423 EKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVM 482

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G++SE   LF+EM+      +V  YN L+ G+ +     EA  LL  M+  G 
Sbjct: 483 IKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGC 542

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++ ++N +++GF   G    A  +F ++K++   P VV+YN ++   S+AG  + A+ 
Sbjct: 543 TPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAK 602

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDD 435
           L++EM  +G     +TY+ ++++  + D+
Sbjct: 603 LMKEMNSKGFEYDLITYSSILEAVGKIDE 631



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 2/287 (0%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LIH     G + E +K   EM            + ++  L K   V +A  +  Q+
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGN 400
           K     P   TYN +I      G  +K   L+N++ + G   P  VTY+ LI AF K G 
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  EM+E G+ P+   YT ++  + +   +EKA  +   M++ G +  VYTY  
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTE 305

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI G+   G ++EA  +F +M +   +P+ V+ N +I    K G    A++L  EM    
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365

Query: 521 LVPNIASYSSTIGVLCQD-GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             PN+ +Y++ I  L +   +  EA +   +M + G+ PS   Y+IL
Sbjct: 366 CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL 412


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 222/462 (48%), Gaps = 8/462 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +  +I  +  +R  ++A     +M  D GV P   T N +L  + KS         F   
Sbjct: 157 WNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV 216

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  + +   +F ILI G  +AG + +A  +  +    G + ++  YT++++   KN  I+
Sbjct: 217 RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQ 276

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  KI   G   T  TY  L+ GL K G  ++  +   K+  NG +P + TY  LI
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 336

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                E +  E +KLF EM  R +A + V Y  LI GL +  ++ +A  +   M   G  
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCV 396

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+T + +IDG   AG    A R+F  +++ G +P+ V Y+ LI    KA     A ++
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 456

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + +M++   TP  +TY ILID   +S D+E A   +  M ++G  PDVYTY +LI GLC 
Sbjct: 457 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCK 516

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN   A  + + M  ++      VY+ ++ G CK G       L  EM   G V N  +
Sbjct: 517 AGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQT 570

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  I  LC+  +  EA  L N + K G+ P    YN +  A
Sbjct: 571 RTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISA 611



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 229/468 (48%), Gaps = 41/468 (8%)

Query: 136 GVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G +   +T N+LL +F       + G L  +E       DV ++ +LI G C A +  +A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 195 FEVLNQLEE-MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL-------------G 240
           F V+ ++EE  G +P++  +  ++ G CK+G +  A   F  +                G
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233

Query: 241 LVATQ---------------------HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
           LV                        HTYT ++  L KN   ++     EK+  NG +P+
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + TYN L++  C  G++ E   L  ++       +VVTY +LI GL KE R  EA +L  
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G++ + + Y  LI G    G+  +A  ++  + S+G  P VVT + +I   SKAG
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  + + ME RG+ P+EV Y+ LI    ++  M+ A EM + M+K+  +PD  TY 
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 473

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +LI GLC  G+++ A   F+ M E   +P+   YN++I G CK GN+  A  +L +M+  
Sbjct: 474 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSS 533

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
             V     YSS +  LC+ GK     +L ++M + G+  S +   +++
Sbjct: 534 RFV-----YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIF 576



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 48/421 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++   K    ++A+    +++D+G  P   T+ SL+  + K     + +  F E  
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + LD   +  LI+G  + G + +A  V   +   G  P+VV  +++IDG  K G I 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F+ +   GL   +  Y+ LI GL K        E   +M+    +P   TYN LI
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G V      FDEM       +V TYN LI GLCK      A  +LD M     S
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----S 531

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +   Y+ L+DG C +G+ +    LF+                                 
Sbjct: 532 SSRFVYSSLVDGLCKSGKLEGGCMLFH--------------------------------- 558

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EME  G+  S+ T T LI    +++ +++A  +++ ++K G  P  Y Y  +I  L  
Sbjct: 559 --EMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIK 614

Query: 468 KGNMKEASKLFNSM--WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            G + E   ++  M  W    +P+ V YN ++ G        RA     EM  +G VP +
Sbjct: 615 SGKVNEGQAVYQEMTRW---WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671

Query: 526 A 526
           +
Sbjct: 672 S 672



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 123/254 (48%), Gaps = 13/254 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y ++I    K+R  D AL    QM  +   P + T+N L+  + KS   +    FF   
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E  CK   DVY++ ILI G C+AG+ + A  VL+ +    F     +Y+SL+DG CK+G
Sbjct: 496 LEAGCKP--DVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSG 548

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E   MLF ++   G VA   T T LI  L K     +    +  ++  G+ P  Y YN
Sbjct: 549 KLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYN 606

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I      GKV+EG  ++ EM  R    + VTYN L+ G+    R+  A     +M   
Sbjct: 607 SIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGR 665

Query: 345 GISPNVITYNKLID 358
           G  P V   +KL D
Sbjct: 666 GYVPPVSILHKLAD 679


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 238/470 (50%), Gaps = 8/470 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
            P + +  T + L   + D   + R++D AL     ML  G +P   T+  LL  + K+ 
Sbjct: 136 MPVAPDAYTYTPLIRVLCD---RGRVAD-ALSLLDDMLRRGCQPNVVTYTVLLEAMCKNS 191

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            F++      E R K    ++ ++ ++I G C  G ++ A ++LN+L   G  P+ V YT
Sbjct: 192 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYT 251

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +L+ G C +   +  + LF ++ E   +  + T+ +LI    + G+ +   +  ++M  +
Sbjct: 252 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
             + +    N +I+  C +G+V + FK  + M       + ++Y T++ GLC+  R  +A
Sbjct: 312 ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDA 371

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + LL +M      PN +T+N  I   C  G  ++A  L  Q++ +G +  VVTYN L+  
Sbjct: 372 KELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG 431

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G+   A +L R M  +   P+ +TYT L+     ++ ++ A E+ + M      P+
Sbjct: 432 FCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+ VL++  C KG + EA +L   M E    PN + YN +  G  K+ +S  AL LL 
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            +  KG+ P++ ++SS IG+L ++ +  EA  + +    +G++P   +YN
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYN 598



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 3/397 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  D Y++  LI+  C+ G +  A  +L+ +   G  PNVV YT L++  CKN   E+A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +  ++   G      TY V+I G+ + G   D  +   ++   G  P   +Y  L+   
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   +  +  +LF EM  +    N VT++ LI   C+   V+ A ++L QM     + N 
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
              N +I+  C  G  D AF+  N + S G +P  ++Y  +++   +A     A +L++E
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M      P+EVT+   I    +   +E+A  +   MQ+ G +  V TY  L++G C++G+
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +  A +LF SM     +PN + Y  ++ G C       A  L+ EM  +   PN+ +++ 
Sbjct: 438 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            +   CQ G   EA  L+ QM++ G  P++  YN L+
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 212/434 (48%), Gaps = 10/434 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L +LF     P T S  Y +++     S+  D     F +M++    P   TF+ L+ F 
Sbjct: 235 LNRLFSYGCQPDTVS--YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292

Query: 152 IKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            +    ++        +E+ C     + +  I+I   C+ G ++ AF+ LN +   G +P
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCN--IVINSICKQGRVDDAFKFLNNMGSYGCNP 350

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           + + YT+++ G C+      AK L +++        + T+   IC L + GL +      
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+MQ +G +  + TYN L++ +C +G +    +LF  M  +    N +TY TL+ GLC  
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNA 467

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R+  A  L+ +M      PNV+T+N L++ FC  G  D+A  L  Q+  +G +P+++TY
Sbjct: 468 ERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITY 527

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N L    +K  +S+ A +L+  +  +G++P  +T++ +I    + D +E+A +M+ L Q 
Sbjct: 528 NTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQD 587

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P    Y  ++ GLC +  +  A      M      PN+  Y ++I G  +EG    
Sbjct: 588 IGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKE 647

Query: 509 ALRLLGEMNEKGLV 522
           A  LL  +  +G+V
Sbjct: 648 AQDLLSMLCSRGVV 661



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 187/401 (46%), Gaps = 6/401 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G   +V  Y +L+ G C+ G ++ A+   
Sbjct: 74  DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR--- 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R IG + +    +TYT LI  L   G   D     + M   G  P++ TY  L+   C  
Sbjct: 131 RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKN 190

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +   + DEMR +    N+VTYN +I G+C+E RV +A  LL+++   G  P+ ++Y
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G C +   D    LF ++      P+ VT+++LIR F + G  + A  ++++M E
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE 310

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
                +     I+I+S  +   ++ AF+  + M   G +PD  +Y  ++ GLC      +
Sbjct: 311 HECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWND 370

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L   M      PN+V +N  I   C++G   +A+ L+ +M E G    + +Y++ + 
Sbjct: 371 AKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVN 430

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             C  G    A  L   M     KP+   Y  L     N E
Sbjct: 431 GFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAE 468



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 3/362 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G +P+V + T LI   C+ G    A  + R     G       Y  L+ G  + G     
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
                 M    V+P  YTY  LI   C+ G+V++   L D+M  R    NVVTY  L+  
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           +CK    ++A  +LD+M+  G +PN++TYN +I+G C  G  D A  L N+L S G  P 
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            V+Y  L++    +       +L  EM E+   P+EVT+ +LI  F R   +E+A ++  
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M +   + +     ++I+ +C +G + +A K  N+M      P+ + Y  ++ G C+  
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  LL EM      PN  ++++ I +LCQ G   +A +L+ QM + G    V  YN
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 565 IL 566
            L
Sbjct: 427 AL 428



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 140/296 (47%), Gaps = 3/296 (1%)

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +G +P +Y    LI   C  G+ S+  ++           +V  YNTL+ G C+   +  
Sbjct: 69  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A RL+  M +A   P+  TY  LI   CD G    A  L + +   G  P+VVTY VL+ 
Sbjct: 129 ARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
           A  K    + A  ++ EM  +G TP+ VTY ++I+   R   ++ A ++ + +   G  P
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQP 245

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D  +Y  L+ GLC      +  +LF  M E    PN+V ++M+I  +C+ G   RA+++L
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +M E     N    +  I  +C+ G+  +A   LN M   G  P    Y  + + 
Sbjct: 306 QQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 6/142 (4%)

Query: 430 FVRSDDMEKAFEMYSL-MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            +  +D+  A  +  L   + G +PDVY    LI  LC +G   +A+++  +  E    P
Sbjct: 49  LIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-EGSGSP 107

Query: 489 NDV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            DV  YN ++ GYC+ G+   A RL+G M    + P+  +Y+  I VLC  G+  +A  L
Sbjct: 108 VDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSL 164

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
           L+ ML+ G +P+V  Y +L  A
Sbjct: 165 LDDMLRRGCQPNVVTYTVLLEA 186



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSEN 167
           Y ++ D   K   S+ AL   H ++  GV P   TF+S++  + K    ++   +F    
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +      +  ++ G C+  +++ A + L  +   G  PN   Y  LI+G  + G ++
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLK 646

Query: 228 RAKMLFRKIGELGLVA 243
            A+ L   +   G+V+
Sbjct: 647 EAQDLLSMLCSRGVVS 662


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 236/500 (47%), Gaps = 60/500 (12%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVEL------ 173
           D+AL +   M   GV P   T+N+L           KG+L     S  R  V+       
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTL----------AKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 174 --DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D+ ++  LI G C+ G++ +A ++  +    GF  NV+ Y  L+   CK G IE A  
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALT 432

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT--------- 282
           LF ++  L L      Y++LI GL K G  +  ++ YE+M+L    P  +          
Sbjct: 433 LFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLF 492

Query: 283 --------------------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                                     YN +I  Y     ++E  +L+ +M  R +  +VV
Sbjct: 493 KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVV 552

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T+NTLI G C+   + EA ++L+ +++ G+ P+V+TY  L++ +C+ G   + F   +++
Sbjct: 553 TFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM 612

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           ++N   P+ VTY VLI+   +      +  L+  M  +G+ P  VTY  +I  F +  ++
Sbjct: 613 EANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEI 672

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            KA ++Y++M      P   TY VLI+ LC+ G++K+  ++  S+ +  +    V Y  +
Sbjct: 673 TKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTI 732

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  +C +G   +AL    +M  KG V +I  YS+ I  LC+ G   EA+     ML  G+
Sbjct: 733 IKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGV 792

Query: 557 KPSV----SLYNILYRAKNN 572
            P      ++ N  ++  NN
Sbjct: 793 TPDPEICKTVLNAFHQQGNN 812



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 270/626 (43%), Gaps = 85/626 (13%)

Query: 16  LISRMAKLPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII 74
           ++ R+  L P  A + F +  +  G +H+  S  ++  +L  K            +  +I
Sbjct: 88  VLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKE-------LDSVI 140

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
              I        S++C L  L     N  +   +++ +  A+ +  +   ALF   +M D
Sbjct: 141 KNLIVDQGLGSASIICDL--LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
              +    T+NSLL  +  +   D  W  ++E +         +  ILI G CE   L  
Sbjct: 199 LNFQASVPTYNSLLHNMRHT---DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLED 255

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A   L+   ++   P++V   +++   CK G I+ A+  F  + + GL+    +Y +L+ 
Sbjct: 256 AISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLH 314

Query: 254 GL-----------FKNGLQKDGFE------------------------FYEKMQLNGVSP 278
           GL           F + ++K G E                          +KM L G++P
Sbjct: 315 GLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNP 374

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            L TY  LI  +C  G + E  KL  E   R    NV+ YN L+  LCK  R++EA  L 
Sbjct: 375 DLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP--------------- 383
           D+M+   + P+ I Y+ LI G C  G   +A++L+ Q++   + P               
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 384 --------------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
                                VV YN++I  + +      A  L  +M ERGITPS VT+
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ F R  D+ +A +M  +++  G  P V TY  L++  C  GNM+E     + M  
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + P  V Y ++I G C++   + +L+LL  M  KGL+P+  +Y++ I   C+  +  +
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  L N ML     P+   Y +L  A
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINA 700



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 204/452 (45%), Gaps = 36/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I  H +    ++AL    + L  G +     +N LL  + K    ++    F E  
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE------------------------- 202
             ++E D   + ILI G C+ G + +A+++  Q+                          
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 203 ----------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                      M    +VV+Y  +IDG  +   I  A  L+ K+ E G+  +  T+  LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  + G   +  +  E ++L G+ PS+ TY  L++ YC  G + E F    EM    V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
              VTY  LI GLC++ ++ E+ +LL+ M   G+ P+ +TYN +I  FC   E  KA +L
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           +N +  +   P+ VTY VLI A    G+ K    +V  +E+R IT  +VTY  +I +   
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + KA   ++ M   GF   +  Y  +I+ LC +G + EA   F  M    + P+  +
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEI 798

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
              ++  + ++GN+      L  + + G + +
Sbjct: 799 CKTVLNAFHQQGNNSSVFEFLAMVVKSGFISH 830


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 223/494 (45%), Gaps = 31/494 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+Y  ++DA L+  +    +  +  M  +GV P   T+N L+  + ++   D       E
Sbjct: 70  RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDE 129

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKA------------------------------F 195
            +R     D  S G ++ G C+ G + +A                              F
Sbjct: 130 MSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVF 189

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V+N++ + G  PNVV YT+++D  CK  ++  A  +  ++  +G      T+T L+ G 
Sbjct: 190 SVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGF 249

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F++G   D    +  M   G +PS  +YN LI   C  G +      F+ M+   +  N 
Sbjct: 250 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNA 309

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+TL+ G      +  A  + ++MK +G  PNV+ Y  +ID  C     D+A  L ++
Sbjct: 310 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 369

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  +   P+ VT+N LI      G    A ++   M   G  P++ TY  L+    R  +
Sbjct: 370 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            + AF M   M  +GF   + TY  +I+ LC     K A  L   M    ++P+   +N 
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 489

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  YCKEG    A  LLG+MN      N+ +Y+  I  LC  GK   A V L +ML  G
Sbjct: 490 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549

Query: 556 LKPSVSLYNILYRA 569
           + P+ + +N+L RA
Sbjct: 550 ICPNEATWNVLVRA 563



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 182/380 (47%), Gaps = 6/380 (1%)

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV-ATQH 246
           AGD++     L ++   G +       + I    + G  +RA   F +  +LG       
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  L+  L +  +       Y+ M+  GV P++YTYN LI   C   +V    K+ DEM
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +    + V++ T++ G+CK  RV+EA   L     A   P   +YN ++   C     
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQASYNAVVHALCGEFRM 185

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            + F + N++   G  P+VVTY  ++ AF KA   +MA  ++  M   G TP+ +T+T L
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +  F     +  A  M+  M   G++P   +Y VLI GLC  G++K A   FNSM    L
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 305

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            PN   Y+ ++ G+   G+   A+ +  EM   G  PN+  Y++ I VLC+   + +AE 
Sbjct: 306 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAES 365

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L+++ML     P+   +N L
Sbjct: 366 LIDKMLMDNCPPNTVTFNTL 385



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 220/464 (47%), Gaps = 13/464 (2%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVR-PRSNTFNSLLIFVIKSCSFDKGWLFFSENR- 168
           + I A  ++  +D+AL  F++  D G R P    +N LL  +++          +   R 
Sbjct: 38  AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 97

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             V+ +VY++ +LI+  C+   ++ A ++L+++   G  P+ V + +++ G CK G +E 
Sbjct: 98  AGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEE 157

Query: 229 AKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           A+    +      V  Q +Y  ++   CG F+     + F    +M   G+ P++ TY  
Sbjct: 158 ARGFLAET-----VPVQASYNAVVHALCGEFR---MWEVFSVVNEMVQRGLQPNVVTYTT 209

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++  +C   ++     +   M       NV+T+  L+ G  ++ +V +A  +   M   G
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +P+ I+YN LI G C  G+   A   FN +K N   P+  TY+ L+  FS AG+   A 
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +  EM+  G  P+ V YT +ID   +    ++A  +   M      P+  T+  LI  L
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 389

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G +  A  +F+ M      PND  YN ++ G  +EGN   A  ++ EM   G   ++
Sbjct: 390 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 449

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +Y++ I  LCQ      A +LL +M+  G++P    +N +  A
Sbjct: 450 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 25/370 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+DA  K+R    A     +M+  G  P   TF +L+          KG  FF + +
Sbjct: 207 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV----------KG--FFEDGK 254

Query: 169 CKVELDVY-------------SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
               L ++             S+ +LI+G C  GDL  A +  N ++     PN   Y++
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 314

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           L+DG    GD++ A +++ ++   G       YT +I  L K  +        +KM ++ 
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P+  T+N LI   C+ G+V     +F  MR      N  TYN L+ GL +E   ++A 
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 434

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            ++ +M   G   +++TYN +I+  C       A  L  ++   G  P   T+N +I A+
Sbjct: 435 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 494

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G   +A+ L+ +M       + V YTILI        +  A      M   G  P+ 
Sbjct: 495 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 554

Query: 456 YTYGVLIHGL 465
            T+ VL+  +
Sbjct: 555 ATWNVLVRAI 564



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 11/314 (3%)

Query: 263 DGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC---NVVTY 318
           DG ++  ++M+L GV+ +       I  +   G      K F   R  ++ C    V  Y
Sbjct: 15  DGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTF--YRASDLGCRDPGVRVY 72

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+  L +E  V     + D M+ AG+ PNV TYN LI   C     D A ++ +++  
Sbjct: 73  NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 132

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P  V++  ++    K G  + A   + E       P + +Y  ++ +      M +
Sbjct: 133 KGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWE 187

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            F + + M + G  P+V TY  ++   C    ++ A  +   M      PN + +  ++ 
Sbjct: 188 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 247

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+ ++G  + AL +   M ++G  P+  SY+  I  LC  G    A    N M +  L P
Sbjct: 248 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 307

Query: 559 SVSLYNILYRAKNN 572
           + + Y+ L    +N
Sbjct: 308 NATTYSTLVDGFSN 321



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 41/212 (19%)

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE------------ 441
               AG+       ++EM  RG+  +E      I +F R+   ++A +            
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 442 ------------------------MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
                                   +Y  M+K+G  P+VYTY +LI  LC    +  A K+
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            + M      P++V +  ++ G CK G    A   L E      VP  ASY++ +  LC 
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCG 181

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +  E   ++N+M++ GL+P+V  Y  +  A
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 1/154 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
            R Y  ++    +      A     +ML++G      T+N+++  + + C      L   
Sbjct: 414 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 473

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
               + ++ D ++F  +I   C+ G ++ A  +L Q+  +    NVV YT LI   C  G
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            +  A +   K+   G+   + T+ VL+  +F N
Sbjct: 534 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 236/460 (51%), Gaps = 3/460 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDV 175
           K+++ ++AL  F+Q+     +P SNT+NS+++ +++    +K    ++E  N      D 
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  LI    + G  + A  + ++++E G  P   IYT+++    K G +E+A  L ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E G   T +TYT LI G+ K G  ++ +  +  M   G  P +   N LI+     G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYN 354
           +++  KLF+EM   +   NVVTYNT+I  L + + R  EA    ++MK  G+ P+  TY+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDGFC     +KA  L  ++   G +P    Y  LI A  KA   + A++L +E+ E 
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               S   Y ++I    +   + +A ++++ M+K G +PDVY Y  L+ G+   G   EA
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L  +M E    P+   +N+++ G+ + G    A+ +   M    + P++ SY++ +G 
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           L + G + EA  L+ +M   G +  +  Y+ +  A   I+
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 191/388 (49%), Gaps = 2/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GEL 239
           ++K   +A  +NKA  +  Q++     P    Y S+I    + G  E+   L+ ++  E 
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
             +    TY+ LI    K G        +++M+ NG+ P+   Y  ++  Y   G+V + 
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM+ +  A  V TY  LI G+ K  +V+EA  +   M   G  P+V+  N LI+ 
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA-FSKAGNSKMASDLVREMEERGITP 418
              AG    A +LF +++S   +P+VVTYN +I+A F     +  A     +M+E G+ P
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S  TY+ILID F +++ +EKA  +   M + GF+P    Y  LI+ L      + A++LF
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             + E     +  VY +MI    K G    A+ L  EM + G  P++ +Y++ +  + + 
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRV 524

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G   EA  LL  M + G  P ++ +NI+
Sbjct: 525 GMTDEAHSLLRTMEENGCTPDLNSHNII 552



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 163/331 (49%), Gaps = 6/331 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I    K+   ++A   F  ML  G +P     N+L+  + K+         F E  
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEME 362

Query: 168 RCKVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +   +V ++  +IK   E+    ++AF    +++E G  P+   Y+ LIDG CK   +
Sbjct: 363 SLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRV 422

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A +L  ++ E G       Y  LI  L K    +   E +++++ N    S   Y  +
Sbjct: 423 EKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVM 482

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           I      G++SE   LF+EM  +++ CN  V  YN L+ G+ +     EA  LL  M+  
Sbjct: 483 IKHLGKCGRLSEAVDLFNEM--KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P++ ++N +++GF   G    A  +F ++K++   P VV+YN ++   S+AG  + A
Sbjct: 541 GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEA 600

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + L++EM  +G     +TY+ ++++  + D+
Sbjct: 601 AKLMKEMNSKGFEYDLITYSSILEAVGKIDE 631



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 2/287 (0%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LIH     G + E +K   EM            + ++  L K   V +A  +  Q+
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGN 400
           K     P   TYN +I      G  +K   L+N++ + G   P  VTY+ LI AF K G 
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  EM+E G+ P+   YT ++  + +   +EKA  +   M++ G +  VYTY  
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTE 305

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI G+   G ++EA  +F +M +   +P+ V+ N +I    K G    A++L  EM    
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365

Query: 521 LVPNIASYSSTIGVLCQD-GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             PN+ +Y++ I  L +   +  EA +   +M + G+ PS   Y+IL
Sbjct: 366 CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL 412


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 153/570 (26%), Positives = 266/570 (46%), Gaps = 22/570 (3%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
            ++++   A   P +A  LF   +RQ  + HT +S + +L L    M +H        + 
Sbjct: 69  VVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLEL----MRAHGRVGDVAQVF 124

Query: 72  KIISGRITSSSFTP--------------RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHL 117
            ++  +I  ++                 RS    L  +    +  V  +  Y  +I   +
Sbjct: 125 DLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM--KEAGIVLNAYTYNGLIYFLV 182

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           KS    +A+  +  M   GV P   T++ L++   K    +       E   + V  +VY
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+ I I+   +AG L +A+ +L ++EE G  P+VV  T LI   C  G +  AK +F K+
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                   + TY  L+     +G  +   E +  ++ +G + ++ +Y   +   C  G+V
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   +FDEM+ + +     +YN+LI G  K  R   A  L + M + G +PN  T+   
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+    +GE+ KA + +  +KS G  P VV  N ++   +K G   MA  +  E++  GI
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P  +TYT++I    ++ + ++A ++++ M ++  +PDV     LI  L   G   EA K
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  + E  LEP D  YN ++ G  +EG     ++LL  MN     PNI +Y++ +  LC
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++G+   A  +L  M   G  P +S YN +
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTV 632



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 223/465 (47%), Gaps = 7/465 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++D   K+   + AL   + M  +G  P  +++N+++  ++K    D+ +  F + +
Sbjct: 594  YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK 653

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI----YTSLIDGCCKNG 224
              +  D  +   ++     +G +    E L+ + E    P+  +      SL++G  K  
Sbjct: 654  KVLAPDYATVCTILPSFVRSGLMK---EALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
              E++      I   GL+      + +I    K+       E  +K +  GVS    +YN
Sbjct: 711  GTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYN 770

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             LI    +E  +    +LF EM+      +  TY+ ++  + K MR+++  ++ ++M   
Sbjct: 771  ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            G     +TYN +I G   +   D+A  L+ QL S G SP+  TY  L+    K GN + A
Sbjct: 831  GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890

Query: 405  SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
              L  EM E G  P+   Y IL++ +  + D EK  E++  M + G +PD+ +Y V+I  
Sbjct: 891  EALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDT 950

Query: 465  LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            LC  G + +    F  + +  LEP+ + YN++I G  K G    AL L  +M +KG+ PN
Sbjct: 951  LCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010

Query: 525  IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + +Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRG 1055



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 209/424 (49%), Gaps = 4/424 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS--FDKGWLFFSENRCKVELDVYSFGI 180
           ++A     +M + G +P   T N++LI ++       D   +F+       + D  ++  
Sbjct: 258 EEAYRILRKMEEEGCKPDVVT-NTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+  C ++GD     E+ N L+  G++ NVV YT+ +D  C+ G ++ A  +F ++ + G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++  Q++Y  LI G  K        E +  M ++G +P+ YT+   I+ +   G+  +  
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K ++ M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  GISP+ ITY  +I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             A   D+A ++F ++  N  +P V+  N LI    KAG    A  +  E++E  + P++
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  L+    R   +++  ++   M  + F P++ TY  ++  LC  G +  A  +  S
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      P+   YN +++G  KEG    A  +  +M +K L P+ A+  + +    + G 
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 541 WPEA 544
             EA
Sbjct: 676 MKEA 679



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++     GD+ + F+++   +      NV  + ++       G +  A +    + E G
Sbjct: 110 LMRAHGRVGDVAQVFDLM---QRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V   +TY  LI  L K+G  ++  + Y+ M  +GV P++ TY+ L+  +          
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM  R V  NV +Y   I  L +  R++EA R+L +M+  G  P+V+T   LI   
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K++ Q P  VTY  L+     +G+S+  S++   ++  G   + 
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+YT  +D+  +   +++A +++  M++ G  P  Y+Y  LI G         A +LFN 
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      PN   + + I  + K G S +AL+    M  KG+VP++ + ++ +  L + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ + +++  +G+ P    Y ++ +
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIK 494



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 221/465 (47%), Gaps = 7/465 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y + +DA  +    D+AL  F +M   G+ P+  ++NSL+   +K+  F++    F+  N
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 + Y+  + I    ++G+  KA +    ++  G  P+VV   +++ G  K G + 
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++  +G+     TYT++I    K     +  + + +M  N  +P +   N LI
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+ +E +K+F E++   +     TYNTL+ GL +E +V+E  +LL+ M      
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP 588

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+ITYN ++D  C  GE + A  +   +  NG  P + +YN ++    K G    A  +
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWM 648

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM---YSLMQKSGFSPDVYTYGVLIHG 464
             +M+ + + P   T   ++ SFVRS  M++A      Y L   S    D  +   L+ G
Sbjct: 649 FCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV--DRSSVHSLMEG 705

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +  +   +++ +   ++  + L  +D+  + +I  +CK   +  A  L+ +    G+   
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLK 765

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             SY++ I  L  +     AE L ++M +LG  P    Y+++  A
Sbjct: 766 TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 151/323 (46%)

Query: 171  VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            V L   S+  LI G  +   ++ A E+ ++++ +G  P+   Y  ++D   K+  IE   
Sbjct: 762  VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821

Query: 231  MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             +  ++   G  +T  TY  +I GL K+ +  +    Y ++   G SP+  TY  L+   
Sbjct: 822  KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881

Query: 291  CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              +G + +   LFDEM       N   YN L+ G       ++   L + M   G++P++
Sbjct: 882  LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941

Query: 351  ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
             +Y  +ID  C  G  +     F QL   G  P ++TYN+LI    K+G  + A  L  +
Sbjct: 942  KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            ME++GI P+  TY  LI    ++    +A +MY  +   G+ P+V+TY  LI G  + G+
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061

Query: 471  MKEASKLFNSMWETKLEPNDVVY 493
             + A   +  M      PN   Y
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 1/324 (0%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
            GV  ++ ++N+L+  ++     D     FSE  R   + D +++ +++    ++  +   
Sbjct: 761  GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             ++  ++   G+    V Y ++I G  K+  ++ A  L+ ++   G   T  TY  L+ G
Sbjct: 821  LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 255  LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
            L K+G  +D    +++M   G  P+   YN L++ Y   G   +  +LF+ M  + +  +
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 315  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            + +Y  +I  LC + R+ +      Q+   G+ P++ITYN LI G   +G  ++A  L+N
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 375  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
             ++  G +P++ TYN LI    KAG +  A  +  E+  +G  P+  TY  LI  +  S 
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 435  DMEKAFEMYSLMQKSGFSPDVYTY 458
              E AF  Y  M   G  P+  TY
Sbjct: 1061 SPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
            Y +II   +KS++ D+A+  ++Q++  G  P   T+  LL  ++K  + +     F E  
Sbjct: 839  YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             C  E +   + IL+ G   AGD  K  E+   + E G +P++  YT +ID  C +G + 
Sbjct: 899  ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                 F+++ ++GL     TY +LI GL K+G  ++    Y  M+  G++P+LYTYN LI
Sbjct: 959  DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  GK +E  K+++E+  +    NV TYN LI G       + A     +M + G  
Sbjct: 1019 LYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCR 1078

Query: 348  PNVITYNKL 356
            PN  TY +L
Sbjct: 1079 PNSSTYMQL 1087


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 153/570 (26%), Positives = 266/570 (46%), Gaps = 22/570 (3%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLIL 71
            ++++   A   P +A  LF   +RQ  + HT +S + +L L    M +H        + 
Sbjct: 69  VVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLEL----MRAHGRVGDVAQVF 124

Query: 72  KIISGRITSSSFTP--------------RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHL 117
            ++  +I  ++                 RS    L  +    +  V  +  Y  +I   +
Sbjct: 125 DLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM--KEAGIVLNAYTYNGLIYFLV 182

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           KS    +A+  +  M   GV P   T++ L++   K    +       E   + V  +VY
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+ I I+   +AG L +A+ +L ++EE G  P+VV  T LI   C  G +  AK +F K+
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                   + TY  L+     +G  +   E +  ++ +G + ++ +Y   +   C  G+V
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   +FDEM+ + +     +YN+LI G  K  R   A  L + M + G +PN  T+   
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+    +GE+ KA + +  +KS G  P VV  N ++   +K G   MA  +  E++  GI
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P  +TYT++I    ++ + ++A ++++ M ++  +PDV     LI  L   G   EA K
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  + E  LEP D  YN ++ G  +EG     ++LL  MN     PNI +Y++ +  LC
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++G+   A  +L  M   G  P +S YN +
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTV 632



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 224/465 (48%), Gaps = 7/465 (1%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +++D   K+   + AL   + M  +G  P  +++N+++  ++K    D+ +  F + +
Sbjct: 594  YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK 653

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI----YTSLIDGCCKNG 224
              +  D  +   ++     +G +    E L+ + E    P+  +      SL++G  K  
Sbjct: 654  KVLAPDYATVCTILPSFVRSGLMK---EALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710

Query: 225  DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
              E++      I   GL+      + +I  L K+       E  +K +  GVS    +YN
Sbjct: 711  GTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYN 770

Query: 285  CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             LI    +E  +    +LF EM+      +  TY+ ++  + K MR+++  ++ ++M   
Sbjct: 771  ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830

Query: 345  GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            G     +TYN +I G   +   D+A  L+ QL S G SP+  TY  L+    K GN + A
Sbjct: 831  GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890

Query: 405  SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
              L  EM E G  P+   Y IL++ +  + D EK  E++  M + G +PD+ +Y V+I  
Sbjct: 891  EALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDT 950

Query: 465  LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            LC  G + +    F  + +  LEP+ + YN++I G  K G    AL L  +M +KG+ PN
Sbjct: 951  LCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010

Query: 525  IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + +Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRG 1055



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 208/424 (49%), Gaps = 4/424 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS--FDKGWLFFSENRCKVELDVYSFGI 180
           ++A     +M + G +P   T N++LI ++       D   +F+       + D  ++  
Sbjct: 258 EEAYRILRKMEEEGCKPDVVT-NTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+  C ++GD     E+ N L+  G++ NVV YT+ +D  C+ G ++ A  +F ++ + G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           ++  Q++Y  LI G  K        E +  M ++G +P+ YT+   I+ +   G+  +  
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K ++ M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  GISP+ ITY  +I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             A   D+A ++F ++  N  +P V+  N LI    KAG    A  +  E++E  + P++
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  L+    R   +++  ++   M  + F P++ TY  ++  LC  G +  A  +  S
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      P+   YN +++G  KE     A  +  +M +K L P+ A+  + +    + G 
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 541 WPEA 544
             EA
Sbjct: 676 MKEA 679



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++     GD+ + F+++   +      NV  + ++       G +  A +    + E G
Sbjct: 110 LMRAHGRVGDVAQVFDLM---QRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V   +TY  LI  L K+G  ++  + Y+ M  +GV P++ TY+ L+  +          
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM  R V  NV +Y   I  L +  R++EA R+L +M+  G  P+V+T   LI   
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K++ Q P  VTY  L+     +G+S+  S++   ++  G   + 
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V+YT  +D+  +   +++A +++  M++ G  P  Y+Y  LI G         A +LFN 
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      PN   + + I  + K G S +AL+    M  KG+VP++ + ++ +  L + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ + +++  +G+ P    Y ++ +
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIK 494



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 219/465 (47%), Gaps = 7/465 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y + +DA  +    D+AL  F +M   G+ P+  ++NSL+   +K+  F++    F+  N
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 + Y+  + I    ++G+  KA +    ++  G  P+VV   +++ G  K G + 
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++  +G+     TYT++I    K     +  + + +M  N  +P +   N LI
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+ +E +K+F E++   +     TYNTL+ GL +E +V+E  +LL+ M      
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP 588

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN+ITYN ++D  C  GE + A  +   +  NG  P + +YN ++    K      A  +
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWM 648

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM---YSLMQKSGFSPDVYTYGVLIHG 464
             +M+ + + P   T   ++ SFVRS  M++A      Y L   S    D  +   L+ G
Sbjct: 649 FCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKV--DRSSVHSLMEG 705

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +  +   +++ +   ++  + L  +D+  + +I   CK   +  A  L+ +    G+   
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLK 765

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             SY++ I  L  +     AE L ++M +LG  P    Y+++  A
Sbjct: 766 TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 151/323 (46%)

Query: 171  VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            V L   S+  LI G  +   ++ A E+ ++++ +G  P+   Y  ++D   K+  IE   
Sbjct: 762  VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821

Query: 231  MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
             +  ++   G  +T  TY  +I GL K+ +  +    Y ++   G SP+  TY  L+   
Sbjct: 822  KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881

Query: 291  CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              +G + +   LFDEM       N   YN L+ G       ++   L + M   G++P++
Sbjct: 882  LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941

Query: 351  ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
             +Y  +ID  C  G  +     F QL   G  P ++TYN+LI    K+G  + A  L  +
Sbjct: 942  KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001

Query: 411  MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
            ME++GI P+  TY  LI    ++    +A +MY  +   G+ P+V+TY  LI G  + G+
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061

Query: 471  MKEASKLFNSMWETKLEPNDVVY 493
             + A   +  M      PN   Y
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 1/324 (0%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
            GV  ++ ++N+L+  ++     D     FSE  R   + D +++ +++    ++  +   
Sbjct: 761  GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             ++  ++   G+    V Y ++I G  K+  ++ A  L+ ++   G   T  TY  L+ G
Sbjct: 821  LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 255  LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
            L K+G  +D    +++M   G  P+   YN L++ Y   G   +  +LF+ M  + +  +
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 315  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            + +Y  +I  LC + R+ +      Q+   G+ P++ITYN LI G   +G  ++A  L+N
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 375  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
             ++  G +P++ TYN LI    KAG +  A  +  E+  +G  P+  TY  LI  +  S 
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 435  DMEKAFEMYSLMQKSGFSPDVYTY 458
              E AF  Y  M   G  P+  TY
Sbjct: 1061 SPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
            Y +II   +KS++ D+A+  ++Q++  G  P   T+  LL  ++K  + +     F E  
Sbjct: 839  YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             C  E +   + IL+ G   AGD  K  E+   + E G +P++  YT +ID  C +G + 
Sbjct: 899  ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                 F+++ ++GL     TY +LI GL K+G  ++    Y  M+  G++P+LYTYN LI
Sbjct: 959  DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  GK +E  K+++E+  +    NV TYN LI G       + A     +M + G  
Sbjct: 1019 LYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCR 1078

Query: 348  PNVITYNKL 356
            PN  TY +L
Sbjct: 1079 PNSSTYMQL 1087


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 204/394 (51%), Gaps = 2/394 (0%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + ++GILI   C+AG +++A  +L +++  G   ++++YTSLI G C  G+++R K LF 
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFD 271

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ E G      TY  LI G  K G  K+  E +E M   GV P++YTY  LI   C  G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVG 331

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K  E  +L + M  ++   NVVTYN +I  LCK+  V +A  +++ MK     P+ ITYN
Sbjct: 332 KTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYN 391

Query: 355 KLIDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            L+ G C  G+ D+A +L   +   S+   P V+++N LI    K      A D+   + 
Sbjct: 392 SLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           E+      VT  IL++S ++S D+ KA E++  +  S   P+  TY  +I G C  G + 
Sbjct: 452 EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A  L   M  ++L P+   YN ++   CK+G   +A RL  EM      P++ S++  I
Sbjct: 512 VAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMI 571

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               + G    AE LL  M   GL P +  Y+ L
Sbjct: 572 DGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 2/294 (0%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G + ++Y YN L+   C   +  +   L  EMR   +  +VV+YNT+I G C+   +++A
Sbjct: 137 GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +L ++M+ +G S +++T+  LID FC AG+ D+A  L  ++K  G    ++ Y  LIR 
Sbjct: 197 LQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRG 256

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G       L  E+ ERG +P  +TY  LI  F +   +++A E++  M + G  P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPN 316

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           VYTY  LI GLC  G  KEA +L N M +   EPN V YN++I   CK+     AL ++ 
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVE 376

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG--LKPSVSLYNIL 566
            M ++   P+  +Y+S +G LC  G   EA  LL  MLK      P V  +N L
Sbjct: 377 LMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNAL 430



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 208/422 (49%), Gaps = 37/422 (8%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           A+  F Q +DSG    S   N+L+  +++S + +  + F+   R  +E D +   + + G
Sbjct: 57  AVSVFQQAVDSG-GSLSFAGNNLMATLVRSRNHEVAFSFY---RKMLETDTFINFVSLSG 112

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                      E   Q+ + GF+  V+                 A ML R     G    
Sbjct: 113 ---------LLECFVQMRKTGFAHGVL-----------------ALMLKR-----GFAFN 141

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
            + Y +L+ GL +N           +M+ N + P + +YN +I  +C   ++ +  +L +
Sbjct: 142 VYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM+    + ++VT+  LI   CK  ++ EA  LL +MK  G+  ++I Y  LI GFCD G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           E D+   LF+++   G SP  +TYN LIR F K G  K AS++   M ERG+ P+  TYT
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYT 321

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID        ++A ++ +LM +    P+V TY ++I+ LC    + +A ++   M + 
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKR 381

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM--NEKGLVPNIASYSSTIGVLCQDGKWP 542
           +  P+++ YN ++ G C +G+   A +LL  M  +     P++ S+++ I  LC+  +  
Sbjct: 382 RTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLH 441

Query: 543 EA 544
           +A
Sbjct: 442 QA 443



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%)

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
            F FY KM       +  + + L+  +    K      +   M  R  A NV  YN L+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLC+ +   +A  LL +M+   + P+V++YN +I GFC+  E +KA +L N+++ +G S 
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S+VT+ +LI AF KAG    A  L++EM+ +G+    + YT LI  F    ++++   ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             + + G SP   TY  LI G C  G +KEAS++F  M E  + PN   Y  +I G C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G +  AL+LL  M +K   PN+ +Y+  I  LC+D    +A  ++  M K   +P    Y
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITY 390

Query: 564 NIL 566
           N L
Sbjct: 391 NSL 393



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 194/421 (46%), Gaps = 13/421 (3%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE----- 166
           +IDA  K+   D+A+    +M   G+      + SL+         D+G   F E     
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C +     ++  LI+G C+ G L +A E+   + E G  PNV  YT LIDG C  G 
Sbjct: 278 DSPCAI-----TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGK 332

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A  L   + +        TY ++I  L K+ L  D  E  E M+     P   TYN 
Sbjct: 333 TKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNS 392

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           L+   C +G + E  KL   M         +V+++N LI GLCK  R+ +A  + D +  
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVE 452

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
              + +++T N L++    +G+ +KA  L+ Q+ ++   P+  TY  +I  F K G   +
Sbjct: 453 KLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNV 512

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+ +M    + PS   Y  L+ S  +   +++A+ ++  MQ+    PDV ++ ++I 
Sbjct: 513 AKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMID 572

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G    G++K A  L   M    L P+   Y+ +I  + K G    A+    +M + G  P
Sbjct: 573 GSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632

Query: 524 N 524
           +
Sbjct: 633 D 633



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 167/323 (51%), Gaps = 6/323 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG----WLFF 164
           Y  II+   K  L   AL     M     RP + T+NSLL  +      D+     +L  
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            ++    + DV SF  LI G C+   L++A ++ + L E   + ++V    L++   K+G
Sbjct: 415 KDSS-YTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D+ +A  L+++I    +V    TYT +I G  K G+         KM+L+ + PS++ YN
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           CL+   C +G + + ++LF+EM+  +   +V+++N +I G  K   ++ AE LL  M  A
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+SP++ TY+KLI+ F   G  D+A   F+++  +G  P     + +++     G +   
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKL 653

Query: 405 SDLVREMEERGIT-PSEVTYTIL 426
           ++ V+++ ++ +    E+T T++
Sbjct: 654 TEFVKKLVDKDVVLDKELTCTVM 676



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 95/201 (47%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF  + ++       + V+ + L+  F +   +  A  ++  M +RG   +   Y IL+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R+ +  KA  +   M+++   PDV +Y  +I G C    +++A +L N M  +    
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V + ++I  +CK G    A+ LL EM  KGL  ++  Y+S I   C  G+    + L 
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           +++L+ G  P    YN L R 
Sbjct: 271 DEVLERGDSPCAITYNTLIRG 291



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S+S  V  S  Y ++ID   K+ + + A     +M  S + P    +N LL  + K  + 
Sbjct: 486 SNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTL 545

Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D+ W  F E  R     DV SF I+I G  +AGD+  A  +L  +   G SP++  Y+ L
Sbjct: 546 DQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           I+   K G ++ A   F K+ + G     H
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPDAH 635



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 36/201 (17%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +F Q   +G S S    N L+    ++ N ++A    R+M E     + V+ + L++
Sbjct: 57  AVSVFQQAVDSGGSLSFAGNN-LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            FV+      A  + +LM K GF+ +VY Y +L+                          
Sbjct: 116 CFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK------------------------- 150

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
                     G C+     +A+ LL EM +  L+P++ SY++ I   C+  +  +A  L 
Sbjct: 151 ----------GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           N+M   G   S+  + IL  A
Sbjct: 201 NEMQGSGCSWSLVTWGILIDA 221


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 208/428 (48%), Gaps = 21/428 (4%)

Query: 157 FDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FDK +    E  R     D  ++  +I   C A  + KAF +  +++ +G +P+V  YT 
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LID  CK G IE+A+ LF ++  +G   T  TYT LI    K        + + +M   G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-----------------RHREVACNVVTY 318
             P+  TY  L+   C  G +S+ F+++ ++                 RH  +A NVVTY
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH-TLAPNVVTY 447

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             L+ GLCK  +V  A  LLD M  +G  PN I Y+ LIDGFC AG+ D A  +F Q+  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  PSV TY  LI    K G   +A  ++ +M +   TP+ VTYT +ID   R  + EK
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++ SLM++ G SP+V TY  LI GL   G +  +  LF  M      PN V Y ++I 
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             C  G   +A  LLGEM +      +  Y   I    +   +  +  +L +M   G  P
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 685

Query: 559 SVSLYNIL 566
              +Y +L
Sbjct: 686 IAPVYGML 693



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 216/439 (49%), Gaps = 35/439 (7%)

Query: 157 FDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FD+   F    RC   + +V ++  L+ G  +   L     ++N +   G +PN  ++ S
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQ 272
           L+   C   D   A  L  ++   G       Y + I   CG  K     D  +  EK  
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEK-- 239

Query: 273 LNGVSPSLYTYNCLIHEY---------CNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
              +   +   NC++++          C  GK  + F+L  EM  +    +  TY+ +I 
Sbjct: 240 ---IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC   +V++A  L  +MKM G++P+V TY  LID FC AG  ++A  LF +++S G SP
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI A+ KA     A+D+   M + G  P++VTY  L+D   ++ ++ KAFE+Y
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416

Query: 444 SLM----------------QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + +                 +   +P+V TYG L+ GLC    +  A +L ++M  +  E
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN +VY+ +I G+CK G    A  +  +M + G +P++ +Y+S I  + +DG+   A  +
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+QMLK    P+V  Y  +
Sbjct: 537 LSQMLKDSCTPNVVTYTAM 555



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 225/515 (43%), Gaps = 62/515 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I   +++   D+A+ + H+M  +   P   T+ +LL   +K      GW     N    
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL--GWCKRIINMMMT 170

Query: 172 E---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN----- 223
           E    +   F  L+   C   D   A+++LN++   G  P  V+Y   I   C       
Sbjct: 171 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 230

Query: 224 ------------------------------------GDIERAKMLFRKIGELGLVATQHT 247
                                               G  ++A  L +++   G V    T
Sbjct: 231 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ +I  L      +  F  +++M++ GV+P +YTY  LI  +C  G + +   LF+EMR
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
               +  VVTY  LI    K  +V +A  +  +M  AG  PN +TY  L+DG C AG   
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410

Query: 368 KAFRLFNQLKSNGQS----------------PSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           KAF ++ +L     S                P+VVTY  L+    KA     A +L+  M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P+ + Y  LID F ++  ++ A E++  M K G+ P V+TY  LI  +   G +
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A K+ + M +    PN V Y  MI G C+ G S +AL+LL  M EKG  PN+ +Y++ 
Sbjct: 531 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  L + GK   +  L  QM + G  P+   Y +L
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 21/432 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK--------------- 153
           Y ++I A+LK++   QA   FH+M+D+G RP   T+ +L+  + K               
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420

Query: 154 --SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
             S S D  + F  E+R  +  +V ++G L+ G C+A  ++ A E+L+ +   G  PN +
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           +Y +LIDG CK G I+ A+ +F ++ + G + + HTYT LI  +FK+G      +   +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +  +P++ TY  +I   C  G+  +  KL   M  +  + NVVTY  LI GL K  ++
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             +  L  QM   G SPN +TY  LI+  C AG  DKA  L  ++K       +  Y   
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--S 449
           I+ FSK+  + +   ++ EME  G  P    Y +LID F ++  +E A E++  M +  S
Sbjct: 661 IQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
               D   Y  LI  LC+   ++EA +L++ M      P   V+  +I G  +      A
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778

Query: 510 LRLLGEMNEKGL 521
           L+L   +  +G+
Sbjct: 779 LQLCYGICHEGV 790



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 222/509 (43%), Gaps = 87/509 (17%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+A     +M+  G  P ++T++ ++ F+  +   +K +L F E +   V  DVY++ IL
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A  +  ++  +G SP VV YT+LI    K   + +A  +F ++ + G 
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKM----------------QLNGVSPSLYTYNC 285
                TY  L+ GL K G     FE Y K+                  + ++P++ TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   KV    +L D M       N + Y+ LI G CK  ++  A+ +  QM   G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 346 -----------------------------------ISPNVITYNKLIDGFCDAGETDKAF 370
                                               +PNV+TY  +IDG C  GE++KA 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L + ++  G SP+VVTY  LI    KAG   ++ DL  +M  +G +P+ VTY +LI+  
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 431 VRSDDMEKAFEMYSLMQKS--------------GFS-------------------PDVYT 457
             +  ++KA  +   M+++              GFS                   P    
Sbjct: 630 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 689

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWE--TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           YG+LI      G ++ A +L   M E  + ++ ++ +Y  +I   C       A RL  E
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           M  +G VP ++ +   I  L +  KW EA
Sbjct: 750 MTRRGFVPELSVFVCLIKGLVEVKKWDEA 778



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 195/483 (40%), Gaps = 97/483 (20%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLFRK 235
           ++  L++    AG ++  F V  ++ E GF  +           CK G    A  M+ R+
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY------------ 283
             +L  V   H    +I GL +     +   F  +M+ N   P++ TY            
Sbjct: 102 DFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157

Query: 284 -----------------------NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
                                  N L+H YCNE   +  +KL + M         V YN 
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 321 L---ICG--------------------------------------LCKEMRVQEAERLLD 339
               ICG                                      LC   +  +A +L+ 
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G  P+  TY+K+I   C A + +KAF LF ++K  G +P V TY +LI +F KAG
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             + A  L  EM   G +P+ VTYT LI +++++  + +A +++  M  +G  P+  TYG
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETK----------------LEPNDVVYNMMIFGYCKE 503
            L+ GLC  GN+ +A +++  +  T                 L PN V Y  ++ G CK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
                A  LL  M   G  PN   Y + I   C+ GK   A+ +  QM K G  PSV  Y
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 517

Query: 564 NIL 566
             L
Sbjct: 518 TSL 520



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 9/298 (3%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  PS  TYN L+    + G+V  GF++  EM       +  T       LCKE R  +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
              LD ++      + +    +I G  +A   D+A    ++++ N   P+VVTY  L+  
Sbjct: 95  ---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F K         ++  M   G  P+   +  L+ S+    D   A+++ + M   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 455 VYTYGVLIHGLCMKGNMKE------ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              Y + I  +C +  +        A K++  M       N V         C  G   +
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A +L+ EM  KG VP+ ++YS  I  LC   K  +A +L  +M  +G+ P V  Y IL
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 9/338 (2%)

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           + G   ++ TY  L+  L   G    GF   ++M  +G     +T  C  H  C EG+ +
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           +     D +   +   + V    +I GL +     EA   L +M+     PNV+TY  L+
Sbjct: 93  DAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GF    +     R+ N + + G +P+   +N L+ ++    +   A  L+  M   G  
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 418 PSEVTYTILIDSFV------RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           P  V Y I I S          D ++ A ++Y  M  +    +          LC  G  
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A +L   M      P+   Y+ +I   C      +A  L  EM   G+ P++ +Y+  
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I   C+ G   +A+ L  +M  +G  P+V  Y  L  A
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 3/209 (1%)

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           D +K  G  P+ +TYN L+     AG+ D  FR+  ++  +G      T      A  K 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A D++   E        V  T +I   + +   ++A      M+ +   P+V TY
Sbjct: 89  GRWADALDMI---EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G   K  +    ++ N M      PN  ++N ++  YC E +   A +LL  M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            G  P    Y+  IG +C   K P  ++L
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLL 234



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 32/207 (15%)

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +RA  +   S  A D    +++ G  PS+VTY  L+     +  ++  F +   M +SGF
Sbjct: 12  LRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 452 SPDVYTYGVLIHGLCMKGN--------------------------------MKEASKLFN 479
             D +T G   H LC +G                                   EA    +
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLH 131

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M      PN V Y  ++ G+ K+       R++  M  +G  PN + ++S +   C + 
Sbjct: 132 RMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  A  LLN+M   G  P   +YNI 
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIF 218



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 15/219 (6%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++ID   K+   D +L  F QM   G  P   T+  L+  +  +   D
Sbjct: 581 SPNVVT----YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF----EVLNQLEEMGFSPNVVIYT 214
           K  L   E +       Y    L    C     +K+F     +L ++E  G  P   +Y 
Sbjct: 637 KARLLLGEMK-----QTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 691

Query: 215 SLIDGCCKNGDIERAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
            LID   K G +E A  L +++ E+   +      Y  LI  L      ++ F  Y +M 
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
             G  P L  + CLI       K  E  +L   + H  V
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 218/468 (46%), Gaps = 38/468 (8%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE-LDVYSFGILIKGCCEAGDLNKA 194
            G  P     N LL  +++   +D     + E   K    D YS  +L++G C    + + 
Sbjct: 938  GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 997

Query: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +++      G  P+VV Y  LIDG C+ GD+ R  +L  ++   G + T  TY  LI  
Sbjct: 998  LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINW 1057

Query: 255  LFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K G L+K G  F E M+  G SP++  YN +I   CN    ++   +  +M       
Sbjct: 1058 LGKKGDLEKIGSLFLE-MRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDP 1116

Query: 314  NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
            +++T+NTLI GLC E  V++AE  L +     ++PN ++Y  LI GFC  GE   A  L 
Sbjct: 1117 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1176

Query: 374  NQLKSNGQSPSVVT-----------------------------------YNVLIRAFSKA 398
             ++   G +P VVT                                   YNVLI    K 
Sbjct: 1177 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKK 1236

Query: 399  GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                 A +++ EM E+ + P E  Y  LID F+RS+++  A +++  M+  G  PD+ + 
Sbjct: 1237 RMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSC 1296

Query: 459  GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
              +I G C  G M EA    ++M +    P++  Y  +I GY K+GN   ALR L +M +
Sbjct: 1297 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 1356

Query: 519  KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   PN+ +YSS I   C+ G    AE L   M    L P+V  Y IL
Sbjct: 1357 RKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 1404



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 204/450 (45%), Gaps = 16/450 (3%)

Query: 107  RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++Y S+IDA    R + QA+    QM  SG  P   TFN+L+  +       K   F  E
Sbjct: 1084 QIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 1143

Query: 167  N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              R ++  +  S+  LI G C  G+L  A ++L ++   G +P+VV + +LI G    G 
Sbjct: 1144 AIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGK 1203

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +  A ++  K+ E  +    + Y VLI GL K  +        E+M    V P  + Y  
Sbjct: 1204 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYAT 1263

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            LI  +     + +  K+F+ M H+ V  ++V+ N +I G C+   + EA   +  M+  G
Sbjct: 1264 LIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1323

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              P+  TY  +I G+   G  + A R    +      P+VVTY+ LI  + K G++  A 
Sbjct: 1324 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAE 1383

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             L   M+   ++P+ VTYTILI S  + D + +A   +  M  +  SP+  T   L++GL
Sbjct: 1384 GLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443

Query: 466  ------------CMKGNMKEASKL---FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                        C    +     L   F  +     +P +  YN +IF  C+      AL
Sbjct: 1444 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1503

Query: 511  RLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                 M +KG VPN  ++ S +   C  GK
Sbjct: 1504 DFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 187/393 (47%), Gaps = 1/393 (0%)

Query: 178  FGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
             G L+    +AG L KA E+  ++ E+ G  P V     L+    +    + A+ L+ ++
Sbjct: 910  LGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 969

Query: 237  GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                  A  ++  VL+ GL      ++G +  E     G  P +  YN LI  YC  G +
Sbjct: 970  LGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 1029

Query: 297  SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              G  L  EM        +VTY +LI  L K+  +++   L  +M+  G SPNV  YN +
Sbjct: 1030 GRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSV 1089

Query: 357  IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
            ID  C+     +A  +  Q+ ++G  P ++T+N LI      G+ + A   +RE   R +
Sbjct: 1090 IDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 1149

Query: 417  TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             P++++YT LI  F    ++  A ++   M   G +PDV T+G LIHGL + G + EA  
Sbjct: 1150 NPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALI 1209

Query: 477  LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            +   M E ++ P+  +YN++I G CK+     A  +L EM EK + P+   Y++ I    
Sbjct: 1210 VREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 1269

Query: 537  QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +     +A  +   M   G+ P +   N + + 
Sbjct: 1270 RSENLGDARKIFEFMEHKGVCPDIVSCNAMIKG 1302



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 223/514 (43%), Gaps = 56/514 (10%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
             Y  +ID + +     + L    +M  +G  P   T+ SL+ ++ K    +K G LF   
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074

Query: 167  NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +     +V  +  +I   C      +A  +L Q+   G  P+++ + +LI G C  G +
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             +A+   R+     L   Q +YT LI G    G      +   +M   G +P + T+  L
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----- 341
            IH     GKVSE   + ++M  R+V  +V  YN LI GLCK+  +  A+ +L++M     
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254

Query: 342  ------------------------------KMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                                          +  G+ P++++ N +I G+C  G   +A  
Sbjct: 1255 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAIL 1314

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
              + ++  G  P   TY  +I  ++K GN   A   + +M +R   P+ VTY+ LI+ + 
Sbjct: 1315 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            ++ D + A  +++ MQ    SP+V TY +LI  L  K  +  A   F +M      PNDV
Sbjct: 1375 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1434

Query: 492  VYNMMIFGY------------CKEGNSYRALRLLGEMNEKGLV-----PNIASYSSTIGV 534
              + ++ G             C     +    LL  +  K LV     P  ++Y++ I  
Sbjct: 1435 TLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL--VVFKKLVFDIGDPRNSAYNAIIFS 1492

Query: 535  LCQDGKWPEAEVLLNQMLKLGLKPS-VSLYNILY 567
            LC+     EA    N+M K G  P+ ++  ++LY
Sbjct: 1493 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLY 1526



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 1/194 (0%)

Query: 380  GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY-TILIDSFVRSDDMEK 438
            G +P+      L+ A++ AG    A+++   + E+  +  EVT+   L+   V     + 
Sbjct: 902  GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961

Query: 439  AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            A ++Y  M       D Y+  VL+ GLC++  ++E  KL  + W     P+ V YN++I 
Sbjct: 962  ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1021

Query: 499  GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            GYC+ G+  R L LLGEM   G +P + +Y S I  L + G   +   L  +M K G  P
Sbjct: 1022 GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1081

Query: 559  SVSLYNILYRAKNN 572
            +V +YN +  A  N
Sbjct: 1082 NVQIYNSVIDALCN 1095



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 28/281 (9%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y ++ID  ++S     A   F  M   GV P   + N+++    +     +  L  S  
Sbjct: 1260 VYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1319

Query: 168  RCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            R KV    D +++  +I G  + G+LN A   L  + +    PNVV Y+SLI+G CK GD
Sbjct: 1320 R-KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1378

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN- 284
             + A+ LF  +    L     TYT+LI  LFK         ++E M LN  SP+  T + 
Sbjct: 1379 TDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 1438

Query: 285  ----------CLIHEYCNEGKVSEG-------FK--LFDEMRHREVACNVVTYNTLICGL 325
                      C+I+  C       G       FK  +FD    R  A     YN +I  L
Sbjct: 1439 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSA-----YNAIIFSL 1493

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            C+   ++EA    ++M   G  PN IT+  L+ GFC  G++
Sbjct: 1494 CRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1534



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 36/265 (13%)

Query: 338  LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFS 396
            L  M +AG +P       L+  + DAG   KA  +  +++   G  P V   N L++   
Sbjct: 895  LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954

Query: 397  KAGNSKMASDLVREM---------------------EER--------------GITPSEV 421
            +      A  L  EM                     E R              G  P  V
Sbjct: 955  EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1014

Query: 422  TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
             Y +LID + R  DM +   +   M+ +GF P + TYG LI+ L  KG++++   LF  M
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             +    PN  +YN +I   C   ++ +A+ +L +M   G  P+I ++++ I  LC +G  
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134

Query: 542  PEAEVLLNQMLKLGLKPSVSLYNIL 566
             +AE  L + ++  L P+   Y  L
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPL 1159


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 263/583 (45%), Gaps = 65/583 (11%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A++ F WA ++ G QH   + +++L   + K   H  A            R+     
Sbjct: 56  PDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFV-KAKRHEEA-----------HRLLKEEL 103

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
            P   LC     FP+         +Y ++I+   K+   DQA     +M + GV+     
Sbjct: 104 EP---LC-----FPNEI-------MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLL 148

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
            ++L+  + +    D+    F     +   +V ++  ++ G C+A  +++A E+ + +E+
Sbjct: 149 HSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208

Query: 204 M-----GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                 G  P+V+ Y+++ID  CK   +++A   F+++  +G      TY+ LI GL K 
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 268

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
               +  E    M+  G   ++  +N ++H      +  +  + F+ +       NVVTY
Sbjct: 269 DRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N  + GLCK  RV EA R+L +M  + ++P+VITY+ +IDGFC AG  DKA  +F ++  
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 388

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
           +   P  VT+  L+  FS+   S+ A  +  +M   G  P   TY +L+D    +D +E 
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+Y  M++    PD  TY  LI  LC    + EA +  + M    + PN  + + ++ 
Sbjct: 449 ALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 508

Query: 499 GYCKEGNSYRALRLLGEMNE--------------------------------KGLVPNIA 526
             CK+G    A  +L  + E                                 G V + A
Sbjct: 509 VLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAA 568

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +YS  +  +C+ GK  EA  ++ QM+  G++P    Y  + R+
Sbjct: 569 TYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 200/470 (42%), Gaps = 70/470 (14%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL---------------LIFVIK 153
           Y ++IDA  K++  D+A  YF +M   G  P   T++SL               L+  +K
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMK 282

Query: 154 SCSFDKGWLFFS------------ENRCKV---------ELDVYSFGILIKGCCEAGDLN 192
              F    + F+            E  C+          + +V ++ + + G C+AG ++
Sbjct: 283 EKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVD 342

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A+ +L ++ E   +P+V+ Y+S+IDG CK G +++A  +F ++     +    T+  L+
Sbjct: 343 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLL 402

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  ++   ++ F  +E M   G  P L TYN L+   C    V    +++ +M+ ++  
Sbjct: 403 HGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQ 462

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +  TY  LI  LC+  RV EA+  LD M+   + PN    + L++  C  GE D+A  +
Sbjct: 463 PDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV 522

Query: 373 FNQ--------------------------------LKSNGQSPSVVTYNVLIRAFSKAGN 400
            +                                 L+S G      TY++ +    KAG 
Sbjct: 523 LDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGK 582

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +++ +M  +G+ P E TY  ++ S    D +E A   +  M   G +P + TY +
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTL 642

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           LI   C      EA ++F +M      P      M     C     Y+ L
Sbjct: 643 LIGEACSADMADEAFRIFEAMVAAGFTPQ--AQTMRTLSSCLRDAGYQDL 690



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 167/367 (45%), Gaps = 16/367 (4%)

Query: 45  QSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVT 104
           ++  I+L ++ SK++      +  +     +GR+  +      ++ H  +  P   +PVT
Sbjct: 343 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH--ECIP---HPVT 397

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LF 163
              L     + H KSR   +A      M+++G  P   T+N L+  V  + S +    ++
Sbjct: 398 FMTLLHGFSE-HKKSR---EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 453

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               R K + D  ++  LI+  C A  +++A E L+ +E     PN  I  +L++  CK 
Sbjct: 454 HKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 513

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+++ A  +   + E+G      T+ +L+  L+   L+K      + ++  G      TY
Sbjct: 514 GEVDEACSVLDNVVEVGCQPLGETFKILVEELY---LRKKWEAASKLLRSPGFVADAATY 570

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           +  + E C  GK  E  ++ ++M  + V  +  TY  ++  LC   RV+ A    ++M  
Sbjct: 571 SLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMAS 630

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G +P ++TY  LI   C A   D+AFR+F  + + G +P   T   L      AG   +
Sbjct: 631 RGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDL 690

Query: 404 ASDLVRE 410
              LVR+
Sbjct: 691 ---LVRQ 694


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 228/503 (45%), Gaps = 23/503 (4%)

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           HL+ L  +   P   S  Y S +  + ++ L   A   F  M   G      T+ +LL  
Sbjct: 96  HLSSLLRAGLAP--DSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQG 153

Query: 151 VIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
           +  +    +    F+    + C  +  VYS  I++ G C AG   +A  +L      GF 
Sbjct: 154 LCGAGMVREAMAVFAGMWPDGCAPDSHVYS--IMVHGLCGAGRAGEAVALLTDAMGKGFV 211

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PNV +Y +LIDG C  GD+E A  +F+ +   G +    TYT LICG  K+G  +     
Sbjct: 212 PNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVL 271

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           Y +M   G++P++ TY  LI   C+EG +   F+L   M    +A N  T   LI  LCK
Sbjct: 272 YSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             R++EA++ L  +   GI  N + Y  +ID  C +G+ D A  L  ++ + G  P    
Sbjct: 332 HGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y+ LI    +      A  L+ +M E G+  + V +TILID  +R    +    +   M 
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMA 451

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
            +G  PDV TY V I   C  G M++A  +   M +  + PN   YN +I GY   G   
Sbjct: 452 AAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVS 511

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE----------------AEVLLNQM 551
           +A   L  M + G  PN  SY+  +G+L +   + +                 E LL ++
Sbjct: 512 QAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEV 571

Query: 552 LKLGLKPSVSLYNILYRAKNNIE 574
           +KL    +  +Y+   R  + ++
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVD 594



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 216/516 (41%), Gaps = 52/516 (10%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    +Y ++ID +  +   + A+  F  M   G  P   T+  L+    KS   ++  +
Sbjct: 211 VPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV 270

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            +S      +  +V ++  LI+G C  G L  AF +L+ +E  G +PN      LID  C
Sbjct: 271 LYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K+G IE A+     + + G+   Q  YT +I  L K+G         +K+   G  P  +
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y+ LI   C E K+ E   L ++M    V  N V +  LI    +E R    + + D+M
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRM 450

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             AG+ P+V+TY   I  +C  G  + A  +  Q+  +G  P++ TYN LI+ ++  G  
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510

Query: 402 KMASDLVREMEERGITPSEVTYTILI---------------------------------- 427
             A   ++ M + G  P++ +YT+L+                                  
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEE 570

Query: 428 -------------DSFVRS----DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
                        D F+R     D +E+A      MQ +  +P    Y  +I        
Sbjct: 571 VIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKL 630

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +KEA +  +SM +    P    Y  +I   C+EG+ + A  + G++  K    +  ++  
Sbjct: 631 LKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  L Q G   +   LL+ M +   +P  ++Y+ L
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 205/479 (42%), Gaps = 52/479 (10%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFS 165
           R Y  +I    KS   ++A+  + +M+++G+ P   T+ +L+         +  + L  S
Sbjct: 250 RTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHS 309

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C +  + ++  +LI   C+ G + +A + L  L + G   N VIYTS+ID  CK+G 
Sbjct: 310 MEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A  L +KI   G V   H Y+ LI GL +     +       M  +GV  +   +  
Sbjct: 370 FDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTI 429

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI ++  E +      + D M    V  +VVTY   I   C++ R+++AE ++ QM   G
Sbjct: 430 LIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHG 489

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL-------------- 391
           + PN+ TYN LI G+ + G   +AF     +  NG  P+  +Y VL              
Sbjct: 490 VRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLV 549

Query: 392 -------------------------------------IRAFSKAGNSKMASDLVREMEER 414
                                                IR  SK    + A   +  M+  
Sbjct: 550 ADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSA 609

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            +TPSE  YT +I+   R   +++A      M K  + P + +Y  +I  LC +G+   A
Sbjct: 610 NLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTA 669

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
             +F  +   +   +++ + ++I G  ++GN+    RLL  M E+   P  A YS   G
Sbjct: 670 KSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTG 728


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 225/477 (47%), Gaps = 19/477 (3%)

Query: 99  SSNPVTKSRLYESIIDA--HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           SS P      Y  ++ A  H       +A     +M   GV+P + T+ + L  + ++  
Sbjct: 202 SSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 157 FDKGWLFFS-----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
               W F        N C    + Y F  +I+G C  G + +A EV + +++ G  P+  
Sbjct: 262 VASAWNFLQMLCQRGNPC----NTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTH 317

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y+ L+DG CK GD+     L  ++   G+  T  +Y+ L+ GL + G  +  FE + ++
Sbjct: 318 SYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRL 377

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           +  G       Y+ +++  C    +     L+++M H     +   Y +LI   C+   +
Sbjct: 378 EEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNL 437

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            +A  + + M  +G+SPNV+T   L+DGF      D+AF   ++++  G  P++  Y V+
Sbjct: 438 TDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVI 497

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I    K   S     +  +M +RG  P  V Y+I+IDSFV++  + +AF ++  M   G 
Sbjct: 498 INGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGT 557

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P+V+TY  LI+GLC    + E   LF  M    L P+ ++Y  +I  YCK  N   AL 
Sbjct: 558 KPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALE 617

Query: 512 LLGEMNEKGLVPNIASYSSTIG----VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   M + GL  +   Y+  IG    VL  DG    A+ L+ +M   GL PSV  Y 
Sbjct: 618 IFRGMGKLGLSADAFLYTCLIGGFSKVLAMDG----AQCLMEEMTNKGLTPSVVTYT 670



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 202/441 (45%), Gaps = 3/441 (0%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+     NP   +  + ++I    +     +A+  F  M   G+ P +++++ L+  + K
Sbjct: 270 QMLCQRGNP-CNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCK 328

Query: 154 SCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
                 G+ L     R  +   + S+  L+ G C AG +  AFE+  +LEE GF  + ++
Sbjct: 329 QGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIV 388

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y+ +++GCC++ +IE    L+  +     V   + YT LI    ++    D    +E M 
Sbjct: 389 YSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELML 448

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +GVSP++ T   L+  +  E  + E F    ++R   +  N+  Y  +I GLCK  +  
Sbjct: 449 DSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSD 508

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
               +   M   G  P+ + Y+ +ID F  A +  +AFRLF+++   G  P+V TY  LI
Sbjct: 509 HVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLI 568

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                         L + M   G+TP  + YT LI  + +  +M+ A E++  M K G S
Sbjct: 569 NGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLS 628

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D + Y  LI G      M  A  L   M    L P+ V Y  +I GY K G+  +A   
Sbjct: 629 ADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMT 688

Query: 513 LGEMNEKGLVPNIASYSSTIG 533
              M + G+ P+ A  S  +G
Sbjct: 689 YNSMLQAGITPD-AKLSCILG 708



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 215/452 (47%), Gaps = 10/452 (2%)

Query: 122 SDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYS 177
           S + LF    ML S   G       + +++   ++   F+   L ++E  +  VEL + +
Sbjct: 119 SGRELFELAPMLVSSLGGSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCN 178

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  L+K   E   +  A  + + ++  G SPNV  Y+ L+     +GD       F  + 
Sbjct: 179 F--LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSA-YTHGDRLYLAEAFELLS 235

Query: 238 EL---GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           E+   G+     TY   + GL +       + F + +   G   + Y +N +I  +C EG
Sbjct: 236 EMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREG 295

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +V E  ++FD M+   +  +  +Y+ L+ GLCK+  V     LL +M   GI+P +++Y+
Sbjct: 296 QVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYS 355

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+ G C AG+ + AF LF +L+  G     + Y++++    +  N ++  DL  +M   
Sbjct: 356 SLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHH 415

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
              P    YT LI +F R  ++  A  ++ LM  SG SP+V T  +L+ G   +  + EA
Sbjct: 416 NFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEA 475

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
               + + +  + PN  +Y ++I G CK   S     +  +M ++G VP+   YS  I  
Sbjct: 476 FLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDS 535

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +  K PEA  L ++ML  G KP+V  Y  L
Sbjct: 536 FVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL 567



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 47/203 (23%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK--- 159
           V  + +Y  IID+ +K+    +A   FH+MLD G +P   T+ SL   +   C  D+   
Sbjct: 523 VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL---INGLCHDDRLPE 579

Query: 160 --------GWLFFSENR----------CK------------------VELDVYSFGILIK 183
                    W   + +R          CK                  +  D + +  LI 
Sbjct: 580 VVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIG 639

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G  +   ++ A  ++ ++   G +P+VV YT+LI G  K GD  +A M +  + + G+  
Sbjct: 640 GFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITP 699

Query: 244 TQHTYTVLICGLFKNGLQKDGFE 266
                 +L       G   DGFE
Sbjct: 700 DAKLSCIL-----GFGNDADGFE 717


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/397 (34%), Positives = 194/397 (48%), Gaps = 2/397 (0%)

Query: 164 FSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F E R + V  D  S+ ++    C  G ++     L  +   GF  +    T +I   C+
Sbjct: 219 FDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCE 278

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G   R    F K  ELGL      +T LI GL K G  K  FE  E+M   G  P++YT
Sbjct: 279 KGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYT 338

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +  LI   C +G   + F+LF ++ R  +   NV TY ++I G CKE ++  AE LL +M
Sbjct: 339 HTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRM 398

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K  G+ PN  TY  LIDG   AG  +KA+ L + +   G S ++ TYN  I +  K G  
Sbjct: 399 KEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF 458

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+++    G+    VTYTILI    R  D  +A   +S M K+G  PD++TY  L
Sbjct: 459 LEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTL 518

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I     +  M+E+ KLF       L P    Y  MI GYC++ N   AL+    M++ G 
Sbjct: 519 IAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGC 578

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            P+  +Y + I  LC++ K  EA  L   M+  GL P
Sbjct: 579 TPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 201/393 (51%), Gaps = 4/393 (1%)

Query: 161 WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           W F       ++ ++ +F  LI G C+ G + +AFE+L ++ + G+ PNV  +T+LIDG 
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 221 CKNGDIERAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
           CK G  E+A  LF K +         HTYT +I G  K            +M+  G+ P+
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             TY CLI  +   G   + ++L D M     + N+ TYN  I  LCK+ R  EA +LL 
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +    G+  + +TY  LI   C   +T +A   F+++   G  P + TYN LI AFS+  
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             + +  L  E    G+ P++ TYT +I  + R  ++  A + ++ M   G +PD  TYG
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYG 586

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            LI GLC +  + EA +L+ +M +  L P +V    + + YCK+ +S  A+ +L  +++K
Sbjct: 587 ALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKK 646

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
             +  +   ++ I  LC + K   A +  +++L
Sbjct: 647 LWIRTV---NTLIRKLCSERKVGMAVLFFHKLL 676



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 1/385 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++   E G   +A  ++ ++E  G    V     +     + G +  A+ +F ++   G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +     +Y ++     + G   D   + + M   G      T   +I  +C +G  S  F
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
             FD+     +  N++ + +LI GLCK   +++A  +L++M   G  PNV T+  LIDG 
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 361 CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           C  G T+KAFRLF +L +S+   P+V TY  +I  + K      A  L+  M+E+G+ P+
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TYT LID   ++ + EKA+E+  LM K GFS +++TY   I  LC KG   EA KL  
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             +   L+ + V Y ++I   C+  ++  AL    +M + G+ P++ +Y++ I    +  
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  E+E L  + + LGL P+   Y 
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYT 551



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 1/347 (0%)

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G  + A  +  ++   GLV T  T   +     + GL       +++M++ GV P   +Y
Sbjct: 175 GKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSY 234

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +   YC  G++S+  +   +M  R    +  T   +I   C++          D+   
Sbjct: 235 KLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVE 294

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ PN+I +  LI+G C  G   +AF +  ++   G  P+V T+  LI    K G ++ 
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEK 354

Query: 404 ASDL-VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           A  L ++ +      P+  TYT +I  + + D + +A  + S M++ G  P+  TY  LI
Sbjct: 355 AFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLI 414

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G    GN ++A +L + M +     N   YN  I   CK+G    A +LL +    GL 
Sbjct: 415 DGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  +Y+  I  LC+     EA V  ++M K G++P +  YN L  A
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAA 521



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 4/306 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  ++ Y  +ID H K+   ++A      M   G      T+N+ +  + K   F +   
Sbjct: 404 VPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACK 463

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              +  R  ++ D  ++ ILI   C   D  +A    +++ + G  P++  Y +LI    
Sbjct: 464 LLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFS 523

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +   +E ++ LF +   LGLV T+ TYT +ICG  ++       +F+ +M  +G +P   
Sbjct: 524 RQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSL 583

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI   C E K+ E  +L++ M  + ++   VT  TL    CK+     A  +L+++
Sbjct: 584 TYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERL 643

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                   + T N LI   C   +   A   F++L    Q+   VT      A  ++   
Sbjct: 644 DK---KLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKY 700

Query: 402 KMASDL 407
            + SDL
Sbjct: 701 ALVSDL 706


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 237/493 (48%), Gaps = 35/493 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A  ++R  ++AL    QM + G     + F +L+  + +            E +
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 241

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D+  + + I    +AG+++ A++  ++L+  G  P+ V YTS+I   CK G + 
Sbjct: 242 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 301

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY------ 281
            A+ LF ++     V   + Y  +I G    G  +D ++  E+++  G  PS+       
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361

Query: 282 ----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                       TYN +I   C  G+V E +++ DEM H  +  
Sbjct: 362 TCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N++T N ++  LCK  +++EA ++ +     G +P+ +TY  LIDG    G+ D+A+RLF
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 481

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++   G + + V Y  LIR F   G  +    + +E+  RG  P        +D   ++
Sbjct: 482 EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA 541

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++EK   ++  ++  GF PDV +Y +LIHGL   G  +E S +F++M +     +   Y
Sbjct: 542 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 601

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++ G+CK G  ++A  +L EM EK + P +A+Y + +  L +  +  EA +L  +   
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 661

Query: 554 LGLKPSVSLYNIL 566
            G++ +V LY+ L
Sbjct: 662 KGIELNVVLYSSL 674



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 230/465 (49%), Gaps = 2/465 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + SI+    K R  D+AL  F +++     P S+T+N ++  +      ++ +    E  
Sbjct: 357 FNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 415

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++ +  I++   C+A  L +A+++     + G +P+ V Y SLIDG  K G ++
Sbjct: 416 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 475

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ + G  A    YT LI   F +G ++DG + ++++   G  P L   N  +
Sbjct: 476 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM 535

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+V +G  +F+++R      +V +Y+ LI GL K  + +E   +   MK  G +
Sbjct: 536 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +   YN ++DGFC +G+  KA+ +  ++K     P+V TY  ++   +K      A  L
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E + +GI  + V Y+ LID F +   +++A+ +   M K G +P+VYT+  L+  L  
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 715

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA   F SM E K  PN   Y+++I G C+     +A     +M ++GLVPN+ +
Sbjct: 716 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 775

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           Y++ I  L + G   +A  L  +    G  P  + +N L    +N
Sbjct: 776 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 820



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 215/466 (46%), Gaps = 36/466 (7%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFF 164
           S  Y  IID        ++A     +M  + + P   T N ++  + K+   ++ + +F 
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID------ 218
           S ++     D  ++  LI G  + G +++A+ +  ++ + G + N V+YTSLI       
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507

Query: 219 ---------------GC------------C--KNGDIERAKMLFRKIGELGLVATQHTYT 249
                          GC            C  K G++E+ +M+F  I   G +    +Y+
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI GL K G  ++    +  M+  G +     YN ++  +C  GKV + +++ +EM+ +
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V   V TY  ++ GL K  R+ EA  L ++ K  GI  NV+ Y+ LIDGF   G  D+A
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           + +  ++   G +P+V T+N L+ A  KA     A    + M+E    P+  TY+ILI+ 
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 747

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             R     KAF  +  MQK G  P+V TY  +I GL   GN+ +A  LF         P+
Sbjct: 748 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 807

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
              +N +I G      +  A ++  E   +G   NI S  S +  L
Sbjct: 808 AASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDAL 853



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 8/400 (2%)

Query: 172 ELDVYSFGILIKGCCE-------AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E+ V  +G+  + C         A  L+ A   +  +  + F P    YT LI    +  
Sbjct: 134 EMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEAR 193

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ERA  L R++ E+G     H +T L+  L + G   D     ++++ + + P +  YN
Sbjct: 194 RPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 253

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             I  +   G V   +K F E++ + +  + V+Y ++I  LCK  R+ EAE L  QM+  
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P    YN +I G+  AG  + A++L  +L+  G  PSVV++N ++    K      A
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 373

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  E+ ++   P+  TY I+ID       +E+A+ +   M+ +   P++ T  +++  
Sbjct: 374 LSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 432

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    ++EA K+F S  +    P+ V Y  +I G  K+G    A RL  +M + G   N
Sbjct: 433 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 492

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              Y+S I      G+  +   +  ++++ G KP ++L N
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 532



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 40/377 (10%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++NPV    +Y S+I         +     F +++  G +P     N+ +  V K+   +
Sbjct: 490 NANPV----VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 545

Query: 159 KGWLFFSENRCKVEL-DVYSFGILIKGC-------------------------------- 185
           KG + F + R    L DV S+ ILI G                                 
Sbjct: 546 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 605

Query: 186 ---CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C++G ++KA+E+L +++E    P V  Y +++DG  K   ++ A MLF +    G+ 
Sbjct: 606 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 665

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                Y+ LI G  K G   + +   E+M   G++P++YT+N L+       +++E    
Sbjct: 666 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 725

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F  M+  +   N  TY+ LI GLC+  +  +A      M+  G+ PNV+TY  +I G   
Sbjct: 726 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 785

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A+ LF + K+NG  P   ++N LI   S A  +  A  +  E   RG   +  +
Sbjct: 786 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKS 845

Query: 423 YTILIDSFVRSDDMEKA 439
              L+D+  +S+ +E+A
Sbjct: 846 CISLLDALNKSECLEQA 862



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L   L +  R+ +A   +  M+     P    Y  LI    +A   ++A  L  Q++  G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
               V  +  L+RA ++ G    A  LV E++   + P  V Y + ID F ++ +++ A+
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           + +  ++  G  PD  +Y  +I  LC  G + EA +LF  M   +  P    YN MI GY
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G    A +LL  + E+G +P++ S++S +  L +  K  EA  L  +++K   +P+ 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 388

Query: 561 SLYNIL 566
           S YNI+
Sbjct: 389 STYNII 394


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 225/459 (49%), Gaps = 5/459 (1%)

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVE 172
           DA L +  S   L  F +M   GV P     N +L  +  +  +D       E  +  +E
Sbjct: 143 DATLDT-CSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIE 201

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAK 230
             + ++  L+    + G  +K   +L ++E  G    PN V Y  +I G  + GD+E A 
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 261

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L   +  L   A+  TY  LI GL   G  K  ++   +M+  G+ P++ TYN +IH  
Sbjct: 262 ELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 320

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G V      F EMR   +  +V+TYN+L+ G CK   ++EA  L   ++ AG++P V
Sbjct: 321 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTV 380

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN  IDG+C  G+ ++A  L  ++   G  P+V TY +L++      +  MA +   E
Sbjct: 381 LTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDE 440

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  +G+ P    Y   I + +   D+ +A E+  ++   G S D  TY +LIHGLC  GN
Sbjct: 441 MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGN 500

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +K+A +L   M    L+P+ + Y  +I  +C+ G    A ++   M   GL+P+  +++ 
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 560

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I   C+ G    A     +ML+ G++P+   YN+L  A
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 599



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 218/463 (47%), Gaps = 2/463 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+ LK    D+      +M    SG  P   T+N ++  + +    ++       
Sbjct: 207 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 266

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI G    G + K +++  ++E  G  P VV Y ++I G  ++G +
Sbjct: 267 MRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLV 326

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A++ F ++  +GL+    TY  L+ G  K G  K+    +  ++  G++P++ TYN  
Sbjct: 327 EAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIR 386

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G + E   L +EM  +    NV TY  L+ G      +  A    D+M   G+
Sbjct: 387 IDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGL 446

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G+  +A  L   L   G S   VTYN+LI    K GN K A +
Sbjct: 447 QPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKE 506

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L  +M   G+ P  +TYT LI +      + +A ++++ M   G  P   T+ V+IH  C
Sbjct: 507 LQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYC 566

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M E  +EPN++ YN++I   C+ G +  A     EM E+GLV N  
Sbjct: 567 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKY 626

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I   C+ G W +A     +M + G+ P    +  L + 
Sbjct: 627 TYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 207/386 (53%), Gaps = 7/386 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAG 189
           +M + G+ P   T+N+++  +++S   +   + F+E R    L DV ++  L+ G C+AG
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 359

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L +A  +   L   G +P V+ Y   IDG C+ GD+E A++L  ++GE G +    TYT
Sbjct: 360 NLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 419

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+ G           EF+++M   G+ P  + YN  I      G ++   +L + +   
Sbjct: 420 ILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLE 479

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA--GISPNVITYNKLIDGFCDAGETD 367
            ++ + VTYN LI GLCK   +++A+ L  QMKM   G+ P+ ITY  LI   C+ G   
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKEL--QMKMVSNGLQPDCITYTCLIHAHCERGLLR 537

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A ++FN + S+G  PS VT+ V+I A+ + GN   A    R+M E G+ P+E+TY +LI
Sbjct: 538 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 597

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            +  R    + A   +  M + G   + YTY +LI G C  GN ++A + +  M +  + 
Sbjct: 598 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIH 657

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLL 513
           P+ + +  ++ G+  +G+ +  +  L
Sbjct: 658 PDYLTHKALVKGF--DGHVHHTIEYL 681



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 3/273 (1%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM    VA +V   N ++  L    R  +   + ++M   GI P+++TYN L+D F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 363 AGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            G  DK   L  ++++ G    P+ VTYNV+I   ++ G+ + A++LV  M       S 
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 275

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  LI   +    ++K +++   M+  G  P V TY  +IHGL   G ++ A   F  
Sbjct: 276 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L P+ + YN ++ GYCK GN   AL L G++   GL P + +Y+  I   C+ G 
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             EA +L  +M + G  P+V  Y IL +   N+
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 428


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 115/324 (35%), Positives = 183/324 (56%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G+ P+V  YT++I+G CK G+   A  LF+K+GE G      TY+ +I  L K+    + 
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + +  M+  G+SP+++TYN LI   CN  +  E   + +EM    +  N+VT++ LI  
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            CKE  V EA  +L  M   G+ PNV+TY+ L++G+    E  +A +LF+ + + G  P 
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V +YN+LI  + KA     A  L  EM  +G+TP  V+Y  LID   +   + +A +++ 
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M  +G  PD+ TY +L+ G C +G + +A +LF +M  T L+PN V+YN++I   CK  
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304

Query: 505 NSYRALRLLGEMNEKGLVPNIASY 528
           N   A +L  E+  +GL PN+  +
Sbjct: 305 NLKEARKLFSELFVQGLQPNMKHW 328



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 169/316 (53%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+++  +I G C+ G+   A  +  ++ E G  P+VV Y+++ID  CK+  +  A  +F
Sbjct: 9   DVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 68

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G+     TY  LI GL      ++      +M    + P++ T++ LI+ +C E
Sbjct: 69  SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 128

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G V E   +   M    V  NVVTY++L+ G   +  V EA +L D M   G  P+V +Y
Sbjct: 129 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+G+C A    +A +LFN++   G +P +V+YN LI    + G  + A DL + M  
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 248

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P   TY+IL+D F +   + KAF ++  MQ +   P++  Y +LI  +C   N+KE
Sbjct: 249 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 308

Query: 474 ASKLFNSMWETKLEPN 489
           A KLF+ ++   L+PN
Sbjct: 309 ARKLFSELFVQGLQPN 324



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 171/321 (53%)

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           HTYT +I GL K G        ++KM   G  P + TY+ +I   C + +V+E   +F  
Sbjct: 11  HTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 70

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M+ + ++ N+ TYN+LI GLC   R +EA  +L++M    I PN++T++ LI+ FC  G 
Sbjct: 71  MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 130

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  +   +   G  P+VVTY+ L+  +S       A  L   M  +G  P   +Y I
Sbjct: 131 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNI 190

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI+ + ++  + +A ++++ M   G +PD+ +Y  LI GLC  G ++EA  LF +M    
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P+   Y++++ G+CK+G   +A RL   M    L PN+  Y+  I  +C+     EA 
Sbjct: 251 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 310

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            L +++   GL+P++  + + 
Sbjct: 311 KLFSELFVQGLQPNMKHWKLF 331



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 162/299 (54%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G  P ++TY  +I+  C  G+      LF +M       +VVTY+T+I  LCK+ R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V EA  +   MK  GISPN+ TYN LI G C+     +A  + N++ S    P++VT+++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  F K GN   A  +++ M E G+ P+ VTY+ L++ +    ++ +A +++ +M   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PDV++Y +LI+G C    + EA +LFN M    L P+ V YN +I G C+ G    A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L   M   G +P++ +YS  +   C+ G   +A  L   M    LKP++ +YNIL  A
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 171/325 (52%), Gaps = 1/325 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M+  G +P  +T+ +++  + K   +     LF        + DV ++  +I   C+   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +N+A ++ + ++  G SPN+  Y SLI G C       A  +  ++  L ++    T+++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI    K G   +     + M   GV P++ TY+ L++ Y  + +V E  KLFD M  + 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +V +YN LI G CK  R+ EA++L ++M   G++P++++YN LIDG C  G   +A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF  + +NG  P + TY++L+  F K G    A  L R M+   + P+ V Y ILID+ 
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDV 455
            +S ++++A +++S +   G  P++
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 40/314 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID+  K R  ++AL  F  M   G+ P   T+NS                      
Sbjct: 48  YSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS---------------------- 85

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                       LI+G C      +A  +LN++  +   PN+V ++ LI+  CK G++  
Sbjct: 86  ------------LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFE 133

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE---FYEKMQLNGVSPSLYTYNC 285
           A+ + + + E+G+     TY+ L+ G     LQ + FE    ++ M   G  P +++YN 
Sbjct: 134 ARGVLKTMTEMGVEPNVVTYSSLMNGY---SLQAEVFEARKLFDVMITKGCKPDVFSYNI 190

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+ YC   ++ E  +LF+EM H+ +  ++V+YNTLI GLC+  R++EA  L   M   G
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P++ TY+ L+DGFC  G   KAFRLF  ++S    P++V YN+LI A  K+ N K A 
Sbjct: 251 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 310

Query: 406 DLVREMEERGITPS 419
            L  E+  +G+ P+
Sbjct: 311 KLFSELFVQGLQPN 324


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 240/491 (48%), Gaps = 32/491 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           L+ ++I+ + +  L++QAL  F+++ + G +P    +N LL  ++    F      +S  
Sbjct: 116 LFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNM 175

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--------------------- 205
            R   E +VY++ IL+K  C+   ++ A ++L ++   G                     
Sbjct: 176 KRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV 235

Query: 206 ---------FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
                    F PNV +Y +LI+G C+   ++   +L  ++ E G+     TY+ +I  L 
Sbjct: 236 EEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
             G  +     + KM + G SP++YT+  L+  Y   G+V E   +++ M       NVV
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            YNTLI GLC   ++ EA  +  +M+  G SPNV TY  LIDGF  AG+   A  ++N++
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            +NG  P+VV Y  ++    ++     A  L+ +M      P+ VT+   I     S  +
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           E A  ++  M++ G SP++ TY  ++ GL  +  +KEA +L   M E  +E N V YN +
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG- 555
             G+C  G    AL+LLG+M   G+ P+  +Y++     C  GK   A  LL+++   G 
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595

Query: 556 LKPSVSLYNIL 566
             P V+ Y  L
Sbjct: 596 WVPEVAAYTSL 606



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 30/395 (7%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
            F    + Y  +I+   +  D++  + L +++   G+  ++  +  +I    + GL +  
Sbjct: 74  AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQA 133

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + +++  G  P++  YN L+    +E +      ++  M+      NV TYN L+  
Sbjct: 134 LKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKA 193

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVIT------------------------------YN 354
           LCK  RV  A +LL +M   G  P+V++                              YN
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYN 253

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI+GFC   +  + F L  Q+   G  P+V+TY+ +I + S  GN ++A  +  +M  R
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVR 313

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G +P+  T+T L+  +     + +A  +++ M + GF P+V  Y  LIHGLC  G M EA
Sbjct: 314 GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             + + M      PN   Y  +I G+ K G+   A  +  +M   G +PN+  Y+S + V
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNV 433

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC+   + +A  L+ +M      P+   +N   + 
Sbjct: 434 LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 41/383 (10%)

Query: 225 DIERAKMLFRKIGE-LGLVATQHTYTVLICGLFKNGLQKDGFEFY-EKMQLNGVSPSLYT 282
           DI  A   FR I        TQ TY ++I  L +     DG ++  ++M+L G+S S   
Sbjct: 58  DIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRE-CDVDGVQYLLQQMKLEGISCSEDL 116

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +  +I+ Y   G   +  K+F   R RE  C   V  YN L+  +  E R Q  E +   
Sbjct: 117 FINVINTYRRVGLAEQALKMF--YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSN 174

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           MK  G  PNV TYN L+   C     D A +L  ++ + G  P VV+Y  +I + SK G 
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 401 SKMASDL-----------------------VRE-------MEERGITPSEVTYTILIDSF 430
            + A +L                       V+E       M E+GI P+ +TY+ +I S 
Sbjct: 235 VEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
               ++E A  +++ M   G SP+VYT+  L+ G  M+G + EA  ++N M E   EPN 
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V YN +I G C  G    A+ +  +M   G  PN+++Y + I    + G    A  + N+
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414

Query: 551 MLKLGLKPSVSLY----NILYRA 569
           M+  G  P+V +Y    N+L R+
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRS 437



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 6/256 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y ++ID   K+     A   +++M+ +G  P    + S++  + +S  F + W      S
Sbjct: 392 YGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMS 451

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C    +  +F   IKG C +G +  A  +  Q+E+ G SPN+  Y  ++DG  K   
Sbjct: 452 TDNCPP--NTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I+ A  L  ++ E G+     TY  +  G    G  ++  +   KM + GV P   TYN 
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           L + YC +GKV    +L D++    +    V  Y +L+ G+C ++ V+EA   LD+M   
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629

Query: 345 GISPNVITYNKLIDGF 360
           GI  N  T+N L+ G 
Sbjct: 630 GICLNAATWNALVRGL 645



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           T  +L  ++ RS    KAF+   L           TY ++I  L  + ++     L   M
Sbjct: 57  TDIVLASNYFRSIANSKAFQHTQL-----------TYQIMIEKLGRECDVDGVQYLLQQM 105

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               +  ++ ++  +I  Y + G + +AL++   + E G  P +  Y+  +  +  + ++
Sbjct: 106 KLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRF 165

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
              E + + M + G +P+V  YNIL +A  KNN
Sbjct: 166 QMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 210/415 (50%), Gaps = 37/415 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ ++  LI+G C  G + ++    ++L   G   + V Y +LI+G CK G    A  L 
Sbjct: 118 DIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177

Query: 234 RKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           RKI GE+        Y  +I GL K+ L +D F+ Y +M    V P++ TY  LI+ +C 
Sbjct: 178 RKIEGEICRPDVV-MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCI 236

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G++ + F L +EM  + V  NV T+NTL+ GLCKE +++EA+ L+  M   G+ P+V T
Sbjct: 237 VGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT 296

Query: 353 YNKLIDGF----------------------CDAGE-------------TDKAFRLFNQLK 377
           YN L+DG+                      CD                 D+A  LF  ++
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR 356

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           +    P VV Y+ LI    K+G    A   V EM +RG  P+ +TYT LID+  +S  ++
Sbjct: 357 NENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVD 416

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           KA  +   ++  G   ++YTY +L+ GLC  G + +A K+F  +       + V Y++MI
Sbjct: 417 KAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMI 476

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            G CKE     AL LL +M +KG VP+  +Y + I    +     +AE LL +M+
Sbjct: 477 NGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 200/392 (51%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  FG ++    +         +  ++E  G   N +    LI+  C    I  A  +F 
Sbjct: 49  IIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFA 108

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LG      TYT LI GL  NG  K+   F++++   G+     +Y  LI+  C  G
Sbjct: 109 KILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIG 168

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +     +L  ++       +VV YNT+I GLCK+  V++A  L  +M    + PNV+TY 
Sbjct: 169 QTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYT 228

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC  G+ DKAF L N++     +P+V T+N L+    K G  + A  LV  M + 
Sbjct: 229 SLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKE 288

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P   TY  L+D +    +  KA  ++++M + G + DV++Y V+I GL     + EA
Sbjct: 289 GVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEA 348

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M    + P+ V Y+ +I G CK G    AL+ + EM+++G  PN+ +Y+S I  
Sbjct: 349 MDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDA 408

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+  +  +A  LL ++   G++ ++  YNIL
Sbjct: 409 LCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 440



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 196/390 (50%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +  ILI   C    +N AF V  ++ ++G+ P+++ YT+LI G C NG ++ +     ++
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     +Y  LI GL K G          K++     P +  YN +I   C +  V
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            + F L+ EM  + V  NVVTY +LI G C   ++ +A  LL++M +  ++PNV T+N L
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +DG C  G+  +A  L   +   G  P V TYN L+  +     +  A ++   M + G+
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           T    +Y+++I    +   +++A +++  M+     PDV  Y  LI GLC  G +  A K
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
             + M +    PN + Y  +I   CK     +A+ LL ++ ++G+  N+ +Y+  +  LC
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +DG+  +A+ +   +L  G    V  Y+I+
Sbjct: 446 KDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 155/595 (26%), Positives = 276/595 (46%), Gaps = 57/595 (9%)

Query: 23  LPPLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           L P  AFS FN  +    + HT ++ + +L +L      H       ++  ++  +I   
Sbjct: 102 LDPTDAFSYFNSVAEMPFVVHTTETCNHMLEIL----RIHRRVGDMVVVFNLMQNQIIKR 157

Query: 82  SFTPRSLLCHLTQLFPSSS---NPVTKSRL-----------YESIIDAHLKSRLSDQALF 127
                + L     LF        P    ++           Y  +I   L+S L  +AL 
Sbjct: 158 DLN--TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALE 215

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCC 186
            + +M+  G++P   TF++L++   K    +       E     ++ ++Y++ I I+   
Sbjct: 216 MYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLG 275

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
            AG +++A  ++ ++E+ G  P+VV YT LID  C  G ++ A  LF K+        + 
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY  ++      G      EF+ +M+ +G +P + T+  L++  C  G + E F L D M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           R + V  N+ TYNTLI GL +  R+ +A  L + M+  G+ P   TY   ID +  +G +
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 367 DKAFR-----------------------------------LFNQLKSNGQSPSVVTYNVL 391
           DKA                                     +FN+LKSNG +P  VTYN++
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           ++ +SKAG    A +L+ +M E    P  +    LI++  ++  +++A++M+  ++    
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           +P V TY  LI GL  +G ++ A +LF SM      PN + +N ++   CK      AL+
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +L +M     +P++ ++++ I  L  + +  +A  L +QM K+     V+L  +L
Sbjct: 636 MLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLL 690



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 198/383 (51%), Gaps = 5/383 (1%)

Query: 187 EAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
             GD+   F ++ NQ+ +   +  ++I+  L       G + +    F K+ E G     
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLF----IRGGLRQTPFAFGKMREAGFHLNA 194

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           ++Y  LI  L ++GL ++  E Y +M L G+ PSL T++ L+              L +E
Sbjct: 195 YSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEE 254

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    +  N+ TY   I  L +  R+ EA R++ +M+  G  P+V+TY  LID  C AG+
Sbjct: 255 MESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK 314

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D A  LF ++K++   P  VTY  ++  FS  G+     +   EME  G  P  +T+TI
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+++  ++ ++++AF +  +M+K G  P+++TY  LI GL     + +A  LFN+M    
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           + P    Y + I  Y K G S +AL    +M  +G+ PNI + ++++  L + G+  EA+
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 546 VLLNQMLKLGLKPSVSLYNILYR 568
           V+ N++   GL P    YN++ +
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMK 517



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 244/533 (45%), Gaps = 58/533 (10%)

Query: 72   KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
            K+I  R+ S+   P S+                    Y  ++  + K+   D+A+     
Sbjct: 494  KVIFNRLKSNGLAPDSVT-------------------YNMMMKCYSKAGQVDEAIELLSD 534

Query: 132  MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGD 190
            M ++   P     NSL+  + K+   D+ W  F   +  K+   V ++  LI G  + G 
Sbjct: 535  MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594

Query: 191  LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            + +A E+   +   G  PN + + +++D  CKN +++ A  +  K+  +  +    T+  
Sbjct: 595  VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654

Query: 251  LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR- 309
            +I GL       D    + +M+   ++P   T   L+      G + + FK+ ++  HR 
Sbjct: 655  IIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713

Query: 310  ----------EVACNVVTY----------NTLICG---------------LCKEMRVQEA 334
                      ++   ++T           + L+CG               LCK  +   A
Sbjct: 714  GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773

Query: 335  ERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
            + +  +  K  G+ P + +YN LI+GF      + A+ LF ++K+ G +P V TYN+L+ 
Sbjct: 774  QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833

Query: 394  AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            A  K+G      +L  +M      P+ +T+ I+I + V+S+ ++KA +++  +    FSP
Sbjct: 834  AHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSP 893

Query: 454  DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
               TYG L+ GL   G ++EA +LF  M +    PN+ +YN++I G+ K G+   A  L 
Sbjct: 894  TPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELF 953

Query: 514  GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              M  +G+ P++ SY+S +G LC+ G+  +A     ++ + GL      YN++
Sbjct: 954  KRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 223/499 (44%), Gaps = 39/499 (7%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
            Y ++I    K     +A+  F  M  +G  P + TFN++L  + K+   D    + +   
Sbjct: 582  YNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                  DV +F  +I G      ++ A  + +Q+++M  +P+ V   +L+ G  KNG +E
Sbjct: 642  TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLME 700

Query: 228  RA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN------------ 274
             A K+    +  LG+   +  +  L+ G+      +    F +++               
Sbjct: 701  DAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPI 760

Query: 275  ------------------------GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
                                    GV P+L +YN LI  +         + LF EM++  
Sbjct: 761  IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820

Query: 311  VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
             A +V TYN L+    K  ++ E   L +QM  +   PN IT+N +I     +   DKA 
Sbjct: 821  CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 371  RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
             LF  L S   SP+  TY  L+    K+G  + A +L  EM + G  P+   Y ILI+ F
Sbjct: 881  DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940

Query: 431  VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             ++ D+  A E++  M + G  PD+ +Y  L+  LC  G + +A   F  + +T L  + 
Sbjct: 941  GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000

Query: 491  VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
            + YN+MI G  +      AL L  EM  +G+ P++ +Y+S I  L   G   +A  L  +
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060

Query: 551  MLKLGLKPSVSLYNILYRA 569
            +  +GL+P+V  YN L R 
Sbjct: 1061 LQFIGLEPNVFTYNALIRG 1079



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 207/496 (41%), Gaps = 78/496 (15%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
            + +I+D   K+   D AL   ++M      P   TFN+++   VI+    D  WLF    
Sbjct: 617  FNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK 676

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ---------------------LEEMGF 206
            +  +  D  +   L+ G  + G +  AF++                        L + G 
Sbjct: 677  K-MLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGT 735

Query: 207  SPNVVIYTSLIDG-CCKNGDI---------------ERAKMLFRKIGELGLVATQHTYTV 250
               ++    L+ G  CK+G +                   +  R   ELG+  T  +Y  
Sbjct: 736  EKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNF 795

Query: 251  LICGLFKNGLQKD--GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            LI G    G+  D   +  + +M+  G +P ++TYN L+  +   GK++E F+L+++M  
Sbjct: 796  LIEGFL--GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMIC 853

Query: 309  REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
                 N +T+N +I  L K   + +A  L   +     SP   TY  L+DG   +G  ++
Sbjct: 854  SSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913

Query: 369  AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS--------- 419
            A  LF ++   G  P+   YN+LI  F K G+   A +L + M   GI P          
Sbjct: 914  AKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVG 973

Query: 420  --------------------------EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
                                       + Y ++ID   RS  +E+A  +Y  MQ  G +P
Sbjct: 974  CLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033

Query: 454  DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
            D++TY  LI  L + G +++A KL+  +    LEPN   YN +I GY   GNS  A  + 
Sbjct: 1034 DLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVY 1093

Query: 514  GEMNEKGLVPNIASYS 529
              M   G  PN  +++
Sbjct: 1094 KRMMVGGCSPNTGTFA 1109



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 162/319 (50%), Gaps = 1/319 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y  +I+  L     + A   F +M ++G  P   T+N LL    KS   ++ +  + +  
Sbjct: 793  YNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI 852

Query: 169  CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C   + +  +  I+I    ++  L+KA ++   L    FSP    Y  L+DG  K+G +E
Sbjct: 853  CSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLE 912

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             AK LF ++ + G       Y +LI G  K G      E +++M   G+ P L +Y  L+
Sbjct: 913  EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLV 972

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               C  G+V +    F++++   +  + + YN +I GL +  R++EA  L D+M+  GI+
Sbjct: 973  GCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            P++ TYN LI     AG  ++A +L+ +L+  G  P+V TYN LIR +S +GNS  A  +
Sbjct: 1033 PDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092

Query: 408  VREMEERGITPSEVTYTIL 426
             + M   G +P+  T+  L
Sbjct: 1093 YKRMMVGGCSPNTGTFAQL 1111



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 216/493 (43%), Gaps = 39/493 (7%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCK 170
           +++A  K+   D+A      M   GV P  +T+N+L+  +++    D    LF +     
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V    Y++ + I    ++G  +KA E   +++  G +PN+V   + +    + G +  AK
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           ++F ++   GL     TY +++    K G   +  E    M  N   P +   N LI+  
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G+V E +K+F  ++  ++A  VVTYNTLI GL KE +VQ A  L   M   G  PN 
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           IT+N ++D  C   E D A ++  ++ +    P V+T+N +I           A  L  +
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFE---------------------MYSLMQKS 449
           M++  +TP  VT   L+   V++  ME AF+                     M  ++ ++
Sbjct: 675 MKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQA 733

Query: 450 GFSPDVYTYGVLIHG-LCMKGNM-----------KEA----SKLFNSMWETKLEPNDVVY 493
           G    +     L+ G +C  G++           K+A    S       E  ++P    Y
Sbjct: 734 GTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESY 793

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I G+    N   A  L  EM   G  P++ +Y+  +    + GK  E   L  QM+ 
Sbjct: 794 NFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMIC 853

Query: 554 LGLKPSVSLYNIL 566
              KP+   +NI+
Sbjct: 854 SSCKPNTITHNII 866



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 173/347 (49%), Gaps = 3/347 (0%)

Query: 116  HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELD 174
            H ++ ++      F + L  GV+P   ++N L+   +   + +  W  F+E +      D
Sbjct: 767  HKQALVAQSVFIRFTKEL--GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPD 824

Query: 175  VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            V+++ +L+    ++G +N+ FE+  Q+      PN + +  +I    K+  +++A  LF 
Sbjct: 825  VFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884

Query: 235  KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
             +       T  TY  L+ GL K+G  ++  E +E+M   G  P+   YN LI+ +   G
Sbjct: 885  DLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTG 944

Query: 295  KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
             V+   +LF  M    +  ++ +Y +L+  LC+  RV +A    +++K  G+  + I YN
Sbjct: 945  DVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYN 1004

Query: 355  KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             +IDG   +   ++A  L+++++S G +P + TYN LI     AG  + A  L  E++  
Sbjct: 1005 LMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064

Query: 415  GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            G+ P+  TY  LI  +  S + + A+ +Y  M   G SP+  T+  L
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 226/463 (48%), Gaps = 7/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S I++  K+   + A+    +M   G+ P   +++S +    +   +++    F + 
Sbjct: 140 IYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDM 199

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R   V  DV ++G  I  C   G   +A  +L ++  +G +PNV+ Y+S+I  C K G  
Sbjct: 200 RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW 259

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L R++  + L     TY   I    K G  K+  +   +M   G+ P + +Y+ +
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319

Query: 287 IHEYCNEG-KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           I + C++G +  E   +  EM    ++ N ++YN+ I    K  + +EA+ LL +M  AG
Sbjct: 320 I-DACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAG 378

Query: 346 ISPNVITYNKLIDGFCDAGETDK-AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           ++  VI YN  I   C  GE  K A  L  ++ + G   +V +Y+  I A  K      A
Sbjct: 379 VTQRVIGYNSAI-AACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKA 437

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L+REM   G+ P+EV Y   ID+  R D  E+A ++   M   G SPDV++Y   I  
Sbjct: 438 KELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAA 497

Query: 465 LCMKGN-MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            C KG+  KEA  +   M    L P+ + YN  I    K G    A+ LLGEM   GL P
Sbjct: 498 -CAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTP 556

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           NI SYSS I    + G+W E   LL +M   G+ P V  Y+ L
Sbjct: 557 NIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHAL 599



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 216/463 (46%), Gaps = 13/463 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++IDA  K      A+F+  +M   G+ P + ++ +     I +C+    W     L 
Sbjct: 71  YSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGA----AINACARGGRWKIALDLL 126

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  V  +V  +   I  C +AG    A  ++ ++  +G +P+V+ Y+S I  C + 
Sbjct: 127 REMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRG 186

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G  E A  LF  +   G+     TY   I      G  K+      K+   G++P++ +Y
Sbjct: 187 GRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISY 246

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + +I     EG+      L  EM+   +A N++TYN  I    K  R +EA  LL +M  
Sbjct: 247 SSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPT 306

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ P+V++Y+ +ID         +A  +  ++ + G SP+ ++YN  I A +K G  K 
Sbjct: 307 VGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKE 366

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+REM   G+T   + Y   I +  + +  ++A  +   M   G    V++Y   I 
Sbjct: 367 AKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAID 426

Query: 464 GLCMKGNMK-EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR-ALRLLGEMNEKGL 521
             C KGN+  +A +L   M    L PN+V YN  I   C  G+ +  A+ LL EM   GL
Sbjct: 427 A-CGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDA-CGRGDQWEEAVDLLREMPTVGL 484

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            P++ SYSS I    +  +W EA  +L +M   GL P +  YN
Sbjct: 485 SPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYN 527



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 190/393 (48%), Gaps = 2/393 (0%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +D  S+ + I  C   G   +A  +L ++   G +P++  Y+++ID C K G  + A   
Sbjct: 31  IDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFF 90

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             ++   G+     +Y   I    + G  K   +   +M    V+P++  YN  I+    
Sbjct: 91  LMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAK 150

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G+      L  EM    +A +V++Y++ I    +  R +EA  L + M+ +G++P+VIT
Sbjct: 151 AGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVIT 210

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y   I    + G   +A  L  ++ + G +P+V++Y+ +I A +K G  K+A DL+REM+
Sbjct: 211 YGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMK 270

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN-M 471
              + P+ +TY   ID+  +    ++A ++   M   G  PDV +Y  +I   C KG+  
Sbjct: 271 AMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDA-CSKGDRW 329

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
           KEA  +   M    L PN + YN  I    K G    A  LL EM   G+   +  Y+S 
Sbjct: 330 KEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSA 389

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           I    +  +W EA  LL +M  +GL  +V  Y+
Sbjct: 390 IAACAKGEQWKEALALLREMPTVGLHTTVFSYS 422



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 1/344 (0%)

Query: 222 KNGDIERAKMLFRKIGEL-GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           ++GD  +A      + +L G +  Q +Y + I    + G  +       +M   G +P L
Sbjct: 9   RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDL 68

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             Y+ +I      G+         EM  + +A +  +Y   I    +  R + A  LL +
Sbjct: 69  SAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLRE 128

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M    ++PNVI YN  I+    AG+ + A  L  ++ + G +P V++Y+  I A  + G 
Sbjct: 129 MLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGR 188

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A +L  +M   G+ P  +TY   I +       ++A  +   +   G +P+V +Y  
Sbjct: 189 WEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSS 248

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I     +G  K A  L   M   +L PN + YN  I    K G    A+ LL EM   G
Sbjct: 249 VITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVG 308

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           L P++ SYSS I    +  +W EA  +L +M  +GL P+   YN
Sbjct: 309 LPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYN 352



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 11/332 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y + IDA  K     +A+    +M   G+ P   +++S    VI +CS    W     + 
Sbjct: 281 YNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSS----VIDACSKGDRWKEAIDIL 336

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                  +  +  S+   I  C + G   +A  +L ++   G +  V+ Y S I  C K 
Sbjct: 337 REMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKG 396

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
              + A  L R++  +GL  T  +Y+  I    K  L     E   +M   G++P+   Y
Sbjct: 397 EQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCY 456

Query: 284 NCLIHEYCNEG-KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           N  I + C  G +  E   L  EM    ++ +V +Y++ I    K  + +EA  +L +M 
Sbjct: 457 NSAI-DACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMS 515

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            AG++P++I YN  ID     G    A  L  ++++ G +P++++Y+  I A  + G  K
Sbjct: 516 AAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWK 575

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSD 434
               L+ EM   G+ P  +TY  L+ +  + D
Sbjct: 576 EGIALLEEMRGSGVVPDVITYHALMVTCAKYD 607



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 1/239 (0%)

Query: 332 QEAERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++A R +D MK + G   +  +Y   I      G+ ++A RL  ++ + G +P +  Y+ 
Sbjct: 14  RKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSA 73

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I A +K G  KMA   + EM  +GI P   +Y   I++  R    + A ++   M    
Sbjct: 74  VIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARD 133

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +P+V  Y   I+     G  + A  L   M    L P+ + Y+  I    + G    AL
Sbjct: 134 VTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEAL 193

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  +M   G+ P++ +Y S I      G+W EA  LL ++  +GL P+V  Y+ +  A
Sbjct: 194 ELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITA 252


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 169/618 (27%), Positives = 269/618 (43%), Gaps = 82/618 (13%)

Query: 20  MAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLLSK--MSSHSHAAAQTLILK---- 72
           M ++ P  AF  FNW  RQ  ++ + Q+ + +L +L     MS     A +++ L     
Sbjct: 130 MIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINLGMHEI 189

Query: 73  ---IISGRI----------------TSSSFTPRSLLCHLTQL----FPSSSNPVTKSRLY 109
              +I G                  T  S   + LL     +     PS  N     R+ 
Sbjct: 190 DDLLIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVL 249

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFFSE 166
                    SR+ ++A   +  M+  G+ P   TFN++L    K+      DK WL    
Sbjct: 250 RD-------SRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWL--EM 300

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +E    ++ ILI G  ++G + +A      ++  GF      +  LI+G CK G  
Sbjct: 301 KRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLF 360

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  +  ++   G+  T  TY + I  L + G   D  E    M     +P + +YN L
Sbjct: 361 DEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTL 416

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H Y    K  E   LFD+++   +  ++VTYNTLI GLC+   ++ A+RL ++M    I
Sbjct: 417 MHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLI 476

Query: 347 SPNVITYNKLIDGFCDAG-----------------------------------ETDKAFR 371
            P+VITY  L+ GF   G                                   +++KAFR
Sbjct: 477 YPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFR 536

Query: 372 LFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           L  ++   +  +P +  YNV I    K GN + A +  R++   G+ P  VTYT +I  +
Sbjct: 537 LHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGY 596

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           +     + A ++Y  M     SP V TY VLIHG    G +++A +    M +  + PN 
Sbjct: 597 LEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNV 656

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + +N ++ G CK GN   A R L +M E+G+ PN  SY+  I   C   KW E   L  +
Sbjct: 657 MTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKE 716

Query: 551 MLKLGLKPSVSLYNILYR 568
           ML   ++P    +  L++
Sbjct: 717 MLDKEIEPDGYTHRALFK 734



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 169/337 (50%), Gaps = 2/337 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAG 189
           ++L S   P   ++N+L+   IK   F +  L F + +   +   + ++  LI G CE+G
Sbjct: 400 ELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESG 459

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +L  A  +  ++      P+V+ YT+L+ G  KNG++  A  ++ ++   G+    + YT
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519

Query: 250 VLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
               G  + G  +  F  +E+M   +  +P L  YN  I   C  G + +  +   ++  
Sbjct: 520 TRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  + VTY T+I G  ++ R + A  L D+M    +SP+VITY  LI G   AG  ++
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF+   ++K  G  P+V+T+N L+    KAGN   A   + +MEE GI+P++ +YTILI 
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS 699

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
                D  E+  ++Y  M      PD YT+  L   L
Sbjct: 700 KHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 176/369 (47%), Gaps = 11/369 (2%)

Query: 52  RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
           R LLS M++    +  TL+     G I    F   SLL     L   + NP   +  Y +
Sbjct: 399 RELLSSMAAPDVVSYNTLM----HGYIKMRKFVEASLL--FDDLKAGNINPSIVT--YNT 450

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           +ID   +S   + A     +M    + P   T+ +LL   +K+ +       + E  R  
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++ D Y++     G    GD  KAF +  ++  E   +P++ IY   IDG CK G++E+A
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA 570

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
               RKI  +GLV    TYT +I G  + G  K   + Y++M    +SPS+ TY  LIH 
Sbjct: 571 IEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHG 630

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +   G++ + F+   EM+ R V  NV+T+N L+ G+CK   + EA R L +M+  GISPN
Sbjct: 631 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             +Y  LI   CD  + ++  +L+ ++      P   T+  L +   K   S MA D   
Sbjct: 691 KYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES-MALDSSG 749

Query: 410 EMEERGITP 418
           +  E+   P
Sbjct: 750 KQPEQQQQP 758



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%)

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +M  +G  PS     I++     S  M KA E+Y  M   G  P V T+  ++      G
Sbjct: 229 KMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAG 288

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           +++   K++  M    +E ++V YN++I G+ K G    A R  G+M   G      S++
Sbjct: 289 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFN 348

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             I   C+ G + EA  + ++ML  G+ P+ S YNI  RA
Sbjct: 349 PLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRA 388


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 193/392 (49%)

Query: 175  VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            V  + +LI G C  GD+ +   +L ++E  GF P +V Y SLI+   K GD+E+   LF 
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241

Query: 235  KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            ++ + G       Y  +I  L K           ++M  +G  P + T+N LI   C+EG
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1301

Query: 295  KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
             V +      E   RE+  N ++Y  LI G C    +  A  LL +M   G +P+V+T+ 
Sbjct: 1302 HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFG 1361

Query: 355  KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             LI G   AG+  +A  +  ++      P V  YNVLI    K      A +++ EM E+
Sbjct: 1362 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421

Query: 415  GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
             + P E  Y  LID F+RS+++  A +++  M+  G  PD+ +   +I G C  G M EA
Sbjct: 1422 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481

Query: 475  SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
                ++M +    P++  Y  +I GY K+GN   ALR L +M ++   PN+ +YSS I  
Sbjct: 1482 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 1541

Query: 535  LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C+ G    AE L   M    L P+V  Y IL
Sbjct: 1542 YCKTGDTDFAEGLFANMQAEALSPNVVTYTIL 1573



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 205/450 (45%), Gaps = 16/450 (3%)

Query: 107  RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++Y S+IDA  K R + QA+    QM  SG  P   TFN+L+  +       K   F  E
Sbjct: 1253 QIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE 1312

Query: 167  N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              R ++  +  S+  LI G C  G+L  A ++L ++   G +P+VV + +LI G    G 
Sbjct: 1313 AIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGK 1372

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +  A ++  K+ E  +    + Y VLI GL K  +        E+M    V P  + Y  
Sbjct: 1373 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYAT 1432

Query: 286  LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            LI  +     + +  K+F+ M H+ +  ++V+ N +I G C+   + EA   +  M+  G
Sbjct: 1433 LIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1492

Query: 346  ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              P+  TY  +I G+   G  + A R    +      P+VVTY+ LI  + K G++  A 
Sbjct: 1493 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAE 1552

Query: 406  DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             L   M+   ++P+ VTYTILI S  + D + +A   +  M  +  SP+  T   L++GL
Sbjct: 1553 GLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612

Query: 466  ------------CMKGNMKEASKL---FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                        C    +     L   F  +     +P +  YN +IF  C+      AL
Sbjct: 1613 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1672

Query: 511  RLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                 M +KG VPN  ++ S +   C  GK
Sbjct: 1673 DFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 223/514 (43%), Gaps = 56/514 (10%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
             Y  +ID + +     + L    +M   G  P   T+ SL+ ++ K    +K G LF   
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243

Query: 167  NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +     +V  +  +I   C+     +A  +L Q+   G  P+++ + +LI G C  G +
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 227  ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             +A+   R+     L   Q +YT LI G    G      +   +M   G +P + T+  L
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1363

Query: 287  IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----- 341
            IH     GKVSE   + ++M  R+V  +V  YN LI GLCK+  +  A+ +L++M     
Sbjct: 1364 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423

Query: 342  ------------------------------KMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                                          +  GI P++++ N +I G+C  G   +A  
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
              + ++  G  P   TY  +I  ++K GN   A   + +M +R   P+ VTY+ LI+ + 
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            ++ D + A  +++ MQ    SP+V TY +LI  L  K  +  A   F +M      PNDV
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1603

Query: 492  VYNMMIFGY------------CKEGNSYRALRLLGEMNEKGLV-----PNIASYSSTIGV 534
              + ++ G             C     +    LL  +  K LV     P  ++Y++ I  
Sbjct: 1604 TLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL--VVFKKLVFDIGDPRNSAYNAIIFS 1661

Query: 535  LCQDGKWPEAEVLLNQMLKLGLKPS-VSLYNILY 567
            LC+     EA    N+M K G  P+ ++  ++LY
Sbjct: 1662 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLY 1695



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 187/393 (47%), Gaps = 1/393 (0%)

Query: 178  FGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
             G L+    +AG L KA ++  ++ E+ G  P V     L+    +    + A+ L+ ++
Sbjct: 1079 LGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 1138

Query: 237  GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                  A  ++  VL+ GL      ++G +  E     G  P +  YN LI  YC  G +
Sbjct: 1139 LGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 1198

Query: 297  SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              G  L  EM  +     +VTY +LI  L K+  +++   L  +M+  G SPNV  YN +
Sbjct: 1199 GRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSV 1258

Query: 357  IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
            ID  C      +A  +  Q+ ++G  P ++T+N LI      G+ + A   +RE   R +
Sbjct: 1259 IDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 1318

Query: 417  TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             P++++YT LI  F    ++  A ++   M   G +PDV T+G LIHGL + G + EA  
Sbjct: 1319 NPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALI 1378

Query: 477  LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            +   M E ++ P+  +YN++I G CK+     A  +L EM EK + P+   Y++ I    
Sbjct: 1379 VREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFI 1438

Query: 537  QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +     +A  +   M   G+ P +   N + + 
Sbjct: 1439 RSENLGDARKIFEFMEHKGICPDIVSCNAMIKG 1471



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 36/265 (13%)

Query: 338  LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFS 396
            L  M +AG +P       L+  + DAG   KA ++  +++   G  P V   N L++   
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123

Query: 397  KAGNSKMASDLVREM---------------------EER--------------GITPSEV 421
            +      A  L  EM                     E R              G  P  V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183

Query: 422  TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
             Y +LID + R  DM +   +   M+  GF P + TYG LI+ L  KG++++   LF  M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
             +    PN  +YN +I   CK  ++ +A+ +L +M   G  P+I ++++ I  LC +G  
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 542  PEAEVLLNQMLKLGLKPSVSLYNIL 566
             +AE  L + ++  L P+   Y  L
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPL 1328



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 28/281 (9%)

Query: 108  LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
            +Y ++ID  ++S     A   F  M   G+ P   + N+++    +     +  L  S  
Sbjct: 1429 VYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1488

Query: 168  RCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            R KV    D +++  +I G  + G+LN A   L  + +    PNVV Y+SLI+G CK GD
Sbjct: 1489 R-KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1547

Query: 226  IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN- 284
             + A+ LF  +    L     TYT+LI  LFK         ++E M LN  SP+  T + 
Sbjct: 1548 TDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHY 1607

Query: 285  ----------CLIHEYCNEGKVSEG-------FK--LFDEMRHREVACNVVTYNTLICGL 325
                      C+I+  C       G       FK  +FD    R  A     YN +I  L
Sbjct: 1608 LVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSA-----YNAIIFSL 1662

Query: 326  CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            C+   ++EA    ++M   G  PN IT+  L+ GFC  G++
Sbjct: 1663 CRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1703



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 41/263 (15%)

Query: 343  MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG-----QSPSVVTY--------- 388
            +A + P+ ++   L        + D A  L +  +S       Q P+ + +         
Sbjct: 994  LAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQSPDHHVALQDPTPLAHSALLRLLAR 1053

Query: 389  --------------------------NVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
                                        L+ A++ AG    A+ +   + E+  +  EVT
Sbjct: 1054 SRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVT 1113

Query: 423  Y-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            +   L+   V     + A ++Y  M       D Y+  VL+ GLC++  ++E  KL  + 
Sbjct: 1114 HCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEAR 1173

Query: 482  WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            W     P+ V YN++I GYC+ G+  R L LLGEM  KG +P + +Y S I  L + G  
Sbjct: 1174 WGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDL 1233

Query: 542  PEAEVLLNQMLKLGLKPSVSLYN 564
             +   L  +M K G  P+V +YN
Sbjct: 1234 EKIGSLFLEMRKRGFSPNVQIYN 1256


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 219/458 (47%), Gaps = 38/458 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +IID   K    D+A   +H+MLD  V P + T+NS++  + K+ + D+         
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDR--------- 64

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                                    A EVL  +      PN   Y S++ G C +G  E+
Sbjct: 65  -------------------------AMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEK 95

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +FRK+   G+     TY  L+  L KNG   +  + ++ M   G+ P + TY  L+H
Sbjct: 96  AIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLH 155

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y ++G + E   L   M    +  +   +N LIC   K+ +V E   +  +M+  G++P
Sbjct: 156 GYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTP 215

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N + Y  +IDG C  G  D A   F Q+   G +P+VV Y  LI A       + A +L+
Sbjct: 216 NAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELI 275

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            E+ ++GI P+ V +  ++DS  +   + ++ +++ L+   G +PDV TY  LI G C+ 
Sbjct: 276 FEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLA 335

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M  A KL   M    L+P+ V Y+ +I GYCK      AL L  EM   G+ P+I +Y
Sbjct: 336 GKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITY 395

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  L +  +   A+ L  ++ + G +  +S YNI+
Sbjct: 396 NIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 171/333 (51%), Gaps = 1/333 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y S++D   K+    +A   F  M+  G++P   T+ +LL  +  K    +   L     
Sbjct: 115 YNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMV 174

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++LD + F ILI    +   +++   V +++ + G +PN V Y ++IDG CK G ++
Sbjct: 175 QNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLD 234

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A + F ++ + GL      YT LI  L      +   E   ++   G++P++  +N ++
Sbjct: 235 DAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTIL 294

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG+V E  KLFD + H  V  +V+TY+TLI G C   ++  A +LL  M   G+ 
Sbjct: 295 DSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLK 354

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TY+ LI+G+C     + A  LF +++SNG +P ++TYN+++    +   +  A +L
Sbjct: 355 PDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKEL 414

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
              + E G      TY I++  F +++ +   F
Sbjct: 415 YARITESGTQLELSTYNIILMDFAKTNSLMMHF 447



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 133/256 (51%), Gaps = 4/256 (1%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VV+YNT+I GL KE  V +A     +M    +SP+ +TYN +I     A   D+A  + 
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +      P+  TYN ++  +  +G S+ A  + R+M   GI P  VTY  L+D   ++
Sbjct: 70  TVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
               +A +++  M K G  PD+ TYG L+HG   KG + E   L   M +  ++ +  V+
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I  Y K+      + +  +M ++GL PN  +Y + I  LC+ G+  +A +   QM+ 
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 554 LGLKPSVSLYNILYRA 569
            GL P+V +Y  L  A
Sbjct: 246 KGLTPNVVVYTSLIHA 261



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++  +I A+ K    D+ +  F +M   G+ P +  + +++  + K    D   L F +
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K +  +V  +  LI   C      KA E++ ++ + G +PN+V + +++D  CK G 
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  +K LF  +G +G+     TY+ LI G    G      +    M   G+ P   TY+ 
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+ YC   ++ +   LF EM    V  +++TYN ++ GL +  R   A+ L  ++  +G
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422

Query: 346 ISPNVITYNKLIDGF 360
               + TYN ++  F
Sbjct: 423 TQLELSTYNIILMDF 437


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 2/346 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+G L+ G C+ G+   A ++L  +E+    PNVV+Y+++IDG CK+  +  A  L+ ++
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
               +     TY  LIC     G     F    +M L  ++P +YT++ LI   C EGK 
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN 236

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           ++  ++F  M    V  NV +YN +I GLCK  RV EA  LL +M    + P+ +TYN L
Sbjct: 237 AK--QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG C +G    A  L N++   GQ   VVTY  L+ A  K  N   A+ L  +M+ERGI
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+  TYT LID   +   ++ A E++  +   G   DV+TY V+I GLC +G   EA  
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           + + M +    PN V + ++I    ++  + +A +LL EM  KGL+
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 199/383 (51%), Gaps = 2/383 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +  ++  L+KG C  G++ K     +++    F  N V Y +L++G CK G+   A  L 
Sbjct: 79  NTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLL 138

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I +         Y+ +I GL K+ L  + ++ Y +M    + P++ TYN LI  +C  
Sbjct: 139 RMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLA 198

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++   F L  EM  + +  +V T++ LI  LCKE +   A+++   M   G++PNV +Y
Sbjct: 199 GQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSY 256

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N +I+G C     D+A  L  ++      P  VTYN LI    K+G    A +L+ EM  
Sbjct: 257 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 316

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG     VTYT L+D+  ++ +++KA  ++  M++ G  P +YTY  LI GLC  G +K 
Sbjct: 317 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 376

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +LF  +       +   Y +MI G CKEG    AL +  +M + G +PN  ++   I 
Sbjct: 377 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 436

Query: 534 VLCQDGKWPEAEVLLNQMLKLGL 556
            L +  +  +AE LL++M+  GL
Sbjct: 437 SLFEKDENDKAEKLLHEMIAKGL 459



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 204/399 (51%), Gaps = 2/399 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E ++ +  ILI   C  G +  +F +L ++ ++G+ PN + +T+L+ G C  G++++  
Sbjct: 41  IEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLL 100

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
               K+        Q +Y  L+ GL K G  +   +    ++     P++  Y+ +I   
Sbjct: 101 HFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGL 160

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C +  V+E + L+ EM  RE+  NV+TYNTLIC  C   ++  A  LL +M +  I+P+V
Sbjct: 161 CKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDV 220

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T++ LID  C  G+  K  ++F+ +   G +P+V +YN++I    K      A +L+RE
Sbjct: 221 YTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 278

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  + + P  VTY  LID   +S  +  A  + + M   G   DV TY  L+  LC   N
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A+ LF  M E  ++P    Y  +I G CK G    A  L   +  KG   ++ +Y+ 
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  LC++G + EA  + ++M   G  P+   + I+ R+
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 179/368 (48%), Gaps = 4/368 (1%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           Q++  G   N+V  + LI+  C  G +  +  L  KI +LG      T+T L+ GL   G
Sbjct: 35  QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             K    F++K+       +  +Y  L++  C  G+     KL   +  R    NVV Y+
Sbjct: 95  EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I GLCK+  V EA  L  +M    I PNVITYN LI  FC AG+   AF L +++   
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
             +P V T+++LI A  K G  K A  +   M + G+ P+  +Y I+I+   +   +++A
Sbjct: 215 NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YNMMIF 498
             +   M      PD  TY  LI GLC  G +  A  L N M   + +P DVV Y  ++ 
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH-RGQPADVVTYTSLLD 331

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             CK  N  +A  L  +M E+G+ P + +Y++ I  LC+ G+   A+ L   +L  G   
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 559 SVSLYNIL 566
            V  Y ++
Sbjct: 392 DVWTYTVM 399



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 2/301 (0%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M + G+  +L T + LI+ +C+ G+++  F L  ++       N +T+ TL+ GLC +
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             V++     D++       N ++Y  L++G C  GET  A +L   ++     P+VV Y
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           + +I    K      A DL  EM+ R I P+ +TY  LI +F  +  +  AF +   M  
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
              +PDVYT+ +LI  LC +G  K A ++F++M +  + PN   YN+MI G CK      
Sbjct: 214 KNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A+ LL EM  K +VP+  +Y+S I  LC+ G+   A  L+N+M   G    V  Y  L  
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 569 A 569
           A
Sbjct: 332 A 332



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 157/344 (45%), Gaps = 36/344 (10%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K +L ++A   + +M    + P   T+N+L+      C+F          
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI------CAF---------- 195

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                             C AG L  AF +L+++     +P+V  ++ LID  CK G  +
Sbjct: 196 ------------------CLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--K 235

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F  + ++G+    ++Y ++I GL K     +      +M    + P   TYN LI
Sbjct: 236 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+++    L +EM HR    +VVTY +L+  LCK   + +A  L  +MK  GI 
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P + TY  LIDG C  G    A  LF  L   G    V TY V+I    K G    A  +
Sbjct: 356 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 415

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
             +ME+ G  P+ VT+ I+I S    D+ +KA ++   M   G 
Sbjct: 416 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 127/252 (50%), Gaps = 2/252 (0%)

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           ++ +N ++  L K         L  QM + GI  N++T + LI+ FC  G+   +F L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++   G  P+ +T+  L++     G  K       ++  +    ++V+Y  L++   ++ 
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           +   A ++  +++     P+V  Y  +I GLC    + EA  L++ M   ++ PN + YN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I  +C  G    A  LL EM  K + P++ ++S  I  LC++GK   A+ + + M+++
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 555 GLKPSVSLYNIL 566
           G+ P+V  YNI+
Sbjct: 248 GVNPNVYSYNIM 259



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 1/223 (0%)

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP +I +NK++              L  Q+   G   ++VT ++LI  F   G    +  
Sbjct: 8   SP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ ++ + G  P+ +T+T L+       +++K    +  +    F  +  +YG L++GLC
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G  + A KL   + +    PN V+Y+ +I G CK+     A  L  EM+ + + PN+ 
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ I   C  G+   A  LL++M+   + P V  ++IL  A
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDA 229



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 5/172 (2%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N V  +  Y S+ID   KS     AL   ++M   G      T+ SLL  + K+ + DK 
Sbjct: 283 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 342

Query: 161 WLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
              F + + + ++  +Y++  LI G C+ G L  A E+   L   G   +V  YT +I G
Sbjct: 343 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 402

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            CK G  + A  +  K+ + G +    T+ ++I  LF    +KD  +  EK+
Sbjct: 403 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF----EKDENDKAEKL 450



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 10/170 (5%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           SGRITS+     + + H  Q     ++ VT    Y S++DA  K++  D+A   F +M +
Sbjct: 301 SGRITSA-LNLMNEMHHRGQ----PADVVT----YTSLLDALCKNQNLDKATALFMKMKE 351

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
            G++P   T+ +L+  + K          F     K   +DV+++ ++I G C+ G  ++
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           A  + +++E+ G  PN V +  +I    +  + ++A+ L  ++   GL+ 
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLG 461


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 208/428 (48%), Gaps = 21/428 (4%)

Query: 157 FDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FDK +    E  R     D  ++  +I   C A  + KAF +  +++ +G +P+V  YT 
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LID  CK G IE+A+ LF ++  +G   T  TYT LI    K        + + +M   G
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-----------------RHREVACNVVTY 318
             P+  TY  L+   C  G +S+ F+++ ++                 RH  +A NVVTY
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT-LAPNVVTY 382

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             L+ GLCK  +V  A  LLD M  +G  PN I Y+ LIDGFC AG+ D A  +F Q+  
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  PSV TY  LI    K G   +A  ++ +M +   TP+ VTYT +ID   R  + EK
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++ SLM++ G SP+V TY  LI GL   G +  +  LF  M      PN V Y ++I 
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             C  G   +A  LLGEM +      +  Y   I    +   +  +  +L +M   G  P
Sbjct: 563 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVP 620

Query: 559 SVSLYNIL 566
              +Y +L
Sbjct: 621 IAPVYGML 628



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 216/439 (49%), Gaps = 35/439 (7%)

Query: 157 FDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FD+   F    RC   + +V ++  L+ G  +   L     ++N +   G +PN  ++ S
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQ 272
           L+   C   D   A  L  ++   G       Y + I   CG  K     D  +  EK  
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEK-- 174

Query: 273 LNGVSPSLYTYNCLIHEY---------CNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
              +   +   NC++++          C  GK  + F+L  EM  +    +  TY+ +I 
Sbjct: 175 ---IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC   +V++A  L  +MKM G++P+V TY  LID FC AG  ++A  LF +++S G SP
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI A+ KA     A+D+   M + G  P++VTY  L+D   ++ ++ KAFE+Y
Sbjct: 292 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 351

Query: 444 SLM----------------QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + +                 +   +P+V TYG L+ GLC    +  A +L ++M  +  E
Sbjct: 352 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 411

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN +VY+ +I G+CK G    A  +  +M + G +P++ +Y+S I  + +DG+   A  +
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+QMLK    P+V  Y  +
Sbjct: 472 LSQMLKDSCTPNVVTYTAM 490



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 225/515 (43%), Gaps = 62/515 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I   +++   D+A+ + H+M  +   P   T+ +LL   +K      GW     N    
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL--GWCKRIINMMMT 105

Query: 172 E---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN----- 223
           E    +   F  L+   C   D   A+++LN++   G  P  V+Y   I   C       
Sbjct: 106 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 165

Query: 224 ------------------------------------GDIERAKMLFRKIGELGLVATQHT 247
                                               G  ++A  L +++   G V    T
Sbjct: 166 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 225

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y+ +I  L      +  F  +++M++ GV+P +YTY  LI  +C  G + +   LF+EMR
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
               +  VVTY  LI    K  +V +A  +  +M  AG  PN +TY  L+DG C AG   
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345

Query: 368 KAFRLFNQLKSNGQS----------------PSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           KAF ++ +L     S                P+VVTY  L+    KA     A +L+  M
Sbjct: 346 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G  P+ + Y  LID F ++  ++ A E++  M K G+ P V+TY  LI  +   G +
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 465

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A K+ + M +    PN V Y  MI G C+ G S +AL+LL  M EKG  PN+ +Y++ 
Sbjct: 466 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I  L + GK   +  L  QM + G  P+   Y +L
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 21/432 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK--------------- 153
           Y ++I A+LK++   QA   FH+M+D+G RP   T+ +L+  + K               
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355

Query: 154 --SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
             S S D  + F  E+R  +  +V ++G L+ G C+A  ++ A E+L+ +   G  PN +
Sbjct: 356 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 415

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           +Y +LIDG CK G I+ A+ +F ++ + G + + HTYT LI  +FK+G      +   +M
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +  +P++ TY  +I   C  G+  +  KL   M  +  + NVVTY  LI GL K  ++
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             +  L  QM   G SPN +TY  LI+  C AG  DKA  L  ++K       +  Y   
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--S 449
           I+ FSK+  + +   ++ EME  G  P    Y +LID F ++  +E A E++  M +  S
Sbjct: 596 IQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 653

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
               D   Y  LI  LC+   ++EA +L++ M      P   V+  +I G  +      A
Sbjct: 654 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713

Query: 510 LRLLGEMNEKGL 521
           L+L   +  +G+
Sbjct: 714 LQLCYGICHEGV 725



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 222/509 (43%), Gaps = 87/509 (17%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+A     +M+  G  P ++T++ ++ F+  +   +K +L F E +   V  DVY++ IL
Sbjct: 205 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 264

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A  +  ++  +G SP VV YT+LI    K   + +A  +F ++ + G 
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKM----------------QLNGVSPSLYTYNC 285
                TY  L+ GL K G     FE Y K+                  + ++P++ TY  
Sbjct: 325 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 384

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   KV    +L D M       N + Y+ LI G CK  ++  A+ +  QM   G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444

Query: 346 -----------------------------------ISPNVITYNKLIDGFCDAGETDKAF 370
                                               +PNV+TY  +IDG C  GE++KA 
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L + ++  G SP+VVTY  LI    KAG   ++ DL  +M  +G +P+ VTY +LI+  
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564

Query: 431 VRSDDMEKAFEMYSLMQKS--------------GFS-------------------PDVYT 457
             +  ++KA  +   M+++              GFS                   P    
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 624

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWE--TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           YG+LI      G ++ A +L   M E  + ++ ++ +Y  +I   C       A RL  E
Sbjct: 625 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 684

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           M  +G VP ++ +   I  L +  KW EA
Sbjct: 685 MTRRGFVPELSVFVCLIKGLVEVKKWDEA 713



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 175/424 (41%), Gaps = 62/424 (14%)

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           + E GF  +           CK G    A  M+ R+  +L  V   H    +I GL +  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH----MISGLMEAS 56

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +   F  +M+ N   P++ TY  L+  +  + ++    ++ + M       N   +N
Sbjct: 57  YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 116

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG-------------------- 359
           +L+   C E     A +LL++M   G  P  + YN  I                      
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 176

Query: 360 ---------------------FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                                 C  G+ DKAF+L  ++   G  P   TY+ +I     A
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
              + A  L +EM+  G+TP   TYTILIDSF ++  +E+A  ++  M+  G SP V TY
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-- 516
             LIH       + +A+ +F+ M +    PNDV Y  ++ G CK GN  +A  +  ++  
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356

Query: 517 --------------NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                         +   L PN+ +Y + +  LC+  K   A  LL+ ML  G +P+  +
Sbjct: 357 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416

Query: 563 YNIL 566
           Y+ L
Sbjct: 417 YDAL 420



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 15/219 (6%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++ID   K+   D +L  F QM   G  P   T+  L+  +  +   D
Sbjct: 516 SPNVVT----YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF----EVLNQLEEMGFSPNVVIYT 214
           K  L   E +       Y    L    C     +K+F     +L ++E  G  P   +Y 
Sbjct: 572 KARLLLGEMK-----QTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 626

Query: 215 SLIDGCCKNGDIERAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
            LID   K G +E A  L +++ E+   +      Y  LI  L      ++ F  Y +M 
Sbjct: 627 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
             G  P L  + CLI       K  E  +L   + H  V
Sbjct: 687 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 3/127 (2%)

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M +SGF  D +T G   H LC +G   +A    + +     + + V+   MI G  +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+  L  M     +PN+ +Y + +    +  +    + ++N M+  G  P+ SL+N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 566 LYRAKNN 572
           L  +  N
Sbjct: 118 LVHSYCN 124


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 221/439 (50%), Gaps = 1/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F  ++  G +P   TF+ +++ F  K C      L     +   E + +++ I+I  CC 
Sbjct: 254 FKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCI 313

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G  + A    N + E G +P VV + ++I+  CK G++  A+ LF  + E+G       
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ G  K          YE+M+  G++P   T+N L+  +   G+  +G +L  ++ 
Sbjct: 374 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  +   ++  + GLC   R+ EA   L  M   G+SP++I +N +I  +  AG  D
Sbjct: 434 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF  +  +   G +PS  T + L+   S  G  + A++L+ +M E+G++ + + +T+L+
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 553

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D F +  D+  A  ++  M++ G  PDV  +   I GL  +G ++EA  +F  M    L 
Sbjct: 554 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 613

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN +I G+CK G    AL+L   M  +GL+P+I + +  IG LC+ G+   A  +
Sbjct: 614 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 673

Query: 548 LNQMLKLGLKPSVSLYNIL 566
              M + GL P +  YN L
Sbjct: 674 FMDMHQTGLSPDIITYNTL 692



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 239/512 (46%), Gaps = 75/512 (14%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAH-LKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           L HL   F    N       Y  +I+A  ++ R SD AL +F+ M++ G  P   TFN++
Sbjct: 288 LLHLMPKFHCEPNAFA----YNIVINACCIRGRTSD-ALAWFNLMIERGCNPTVVTFNTV 342

Query: 148 LIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
                                             I   C+ G++ +A ++ + L+EMGFS
Sbjct: 343 ----------------------------------INAFCKEGNVVEARKLFDGLKEMGFS 368

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG--- 264
           PN ++Y +L++G  K  +I++A ML+ ++ + G+     T+ +L+ G +K G ++DG   
Sbjct: 369 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRL 428

Query: 265 --------------------------------FEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
                                            EF   M   G+SPS+  +N +I  Y  
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 488

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G   + F+ +  M H  +  +  T ++L+ GL    R+QEA  L+ QM   G+S N + 
Sbjct: 489 AGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA 548

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  L+D F   G+   A  L+ +++  G  P VV ++  I   SK G  + A ++  EM 
Sbjct: 549 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 608

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G+ P+   Y  LI  F +   + +A ++  +M+  G  PD++T  ++I GLC +G M+
Sbjct: 609 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 668

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A  +F  M +T L P+ + YN +I GYCK  +   A  L+  M   G  P++ +Y+  I
Sbjct: 669 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 728

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              C   +   A ++L++++  G+ P+   YN
Sbjct: 729 HGFCSSRRMNRAVLMLDELVSAGIVPNTVTYN 760



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 218/446 (48%), Gaps = 3/446 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++++ ++K R  DQA   + +M   G+ P   TFN L+    K    + G     + 
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                L D   F I + G C AG L++A E L  + E G SP+++ + S+I    + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ++A   ++ +   GL  +  T + L+ GL  NG  ++  E   +M   G+S +   +  L
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           + ++   G V     L+ EM  R +  +VV ++  I GL K+  V+EA  +  +M   G+
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN   YN LI GFC  G+ ++A +L   ++  G  P + T N++I    K G  + A +
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  +M + G++P  +TY  LI+ + ++ DM  A  + + M  SG +PD+ TY + IHG C
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 732

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               M  A  + + +    + PN V YN M+ G C +    RA+ L   + +   VPN+ 
Sbjct: 733 SSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILD-RAMILTARLLKMAFVPNVV 791

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQML 552
           + +  +    + G  PE  ++    L
Sbjct: 792 TANLLLSQFYKQGM-PERTLMWGHKL 816



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 216/463 (46%), Gaps = 46/463 (9%)

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--- 166
           +S++ A + + +  QAL    +M + GVRP ++    L   +++   +   W  F +   
Sbjct: 200 DSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR 259

Query: 167 ---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
                CK     Y+F  +I G C  G ++    +L+ + +    PN   Y  +I+ CC  
Sbjct: 260 RGPQPCK-----YTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G                                      D   ++  M   G +P++ T+
Sbjct: 315 GR-----------------------------------TSDALAWFNLMIERGCNPTVVTF 339

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N +I+ +C EG V E  KLFD ++    + N + YNTL+ G  K   + +A  L ++M+ 
Sbjct: 340 NTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRK 399

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            GI+P+ IT+N L+ G    G  +   RL   +   G  P    +++ +     AG    
Sbjct: 400 KGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDE 459

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A + + +M E+G++PS + +  +I ++ ++   +KAFE Y LM   G +P   T   L+ 
Sbjct: 460 AMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLM 519

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL + G ++EA++L   M E  L  N++ + +++  + K G+   A  L GEM  +G+ P
Sbjct: 520 GLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ ++S+ I  L + G   EA  +  +ML+ GL P+   YN L
Sbjct: 580 DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 622



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 167/353 (47%), Gaps = 35/353 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + S+I A+ ++ L D+A   +  M+  G+ P  +T +SLL+ +  +    +      +  
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K + ++  +F +L+    + GD+  A  +  ++E  G  P+VV +++ IDG  K G +E
Sbjct: 539 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 598

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F ++   GL+     Y  LICG  K G   +  +  + M+  G+ P ++T N +I
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 658

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C +G++     +F +M    ++ +++TYNTLI G CK   +  A+ L+++M  +G +
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY------------------- 388
           P++ TYN  I GFC +   ++A  + ++L S G  P+ VTY                   
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILT 778

Query: 389 ---------------NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
                          N+L+  F K G  +       ++ E      E+TY I+
Sbjct: 779 ARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 171/386 (44%), Gaps = 51/386 (13%)

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I+ CC A  L  A E+ +       + +V+ +     G  ++GD+   + ++R     G 
Sbjct: 143 IRSCCVAAHLLAAEELRH------VAQDVIWWVIARIGVLRSGDL--VEFMWR-----GH 189

Query: 242 VATQHTYTVL--ICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
              +  ++VL  +   F N  +     E   +M+  GV PS      L       G    
Sbjct: 190 HVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGN 249

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
            +KLF ++  R       T++ +I G C++  +   E LL  M      PN   YN +I+
Sbjct: 250 VWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVIN 309

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C  G T               S ++  +N++I                    ERG  P
Sbjct: 310 ACCIRGRT---------------SDALAWFNLMI--------------------ERGCNP 334

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + VT+  +I++F +  ++ +A +++  +++ GFSP+   Y  L++G      + +A+ L+
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  + P+ + +N+++ G+ K G      RLL +++  GL+P+ + +  ++  LC  
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYN 564
           G+  EA   L  ML+ GL PS+  +N
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFN 480



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 4/169 (2%)

Query: 404 ASDLVREMEERGITPSEVTYTIL---IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           + DLV E   RG    E  +++L   + +FV ++   +A E+   M++ G  P      +
Sbjct: 178 SGDLV-EFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAI 236

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L   L   G+     KLF  +     +P    ++ +I G+C++G  +    LL  M +  
Sbjct: 237 LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH 296

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             PN  +Y+  I   C  G+  +A    N M++ G  P+V  +N +  A
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINA 345


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 229/437 (52%), Gaps = 14/437 (3%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T N+LL   +K+   +   LFF  +   V E D  S+  L+ G  +AGD+ KA  +  ++
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 202 EEMGF----SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           ++ G     S N+V+      G C  G I  A  +F+ +  +       +YT++I GL K
Sbjct: 164 KDSGIAVLRSHNIVLR-----GLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCK 217

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
           +         +++M    + P + TY  LI     + +V E + LF+E R +     VVT
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 318 YNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           YNT+I GLCK  R++ A  L D M +   + P++ TY+ LI+G   +   +KA+ L+ ++
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI-TPSEVTYTILIDSFVRSDD 435
              G SP VVTYN L+    K+G    A ++ R+M    +  P+ +TYT+LID F + D 
Sbjct: 338 LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR 397

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  A ++   M+     PD  T+  +I  LC +  + EA +LF S+ +T  +P+ V++N 
Sbjct: 398 LGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNT 456

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           M+ GYCK      A +L   M + G  P +A+Y++ +   C+ G++ +A ++ ++M+++G
Sbjct: 457 MLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMG 516

Query: 556 LKPSVSLYNILYRAKNN 572
             P   L  ++ R + +
Sbjct: 517 FPPERHLAELVDRTRTD 533



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 220/487 (45%), Gaps = 38/487 (7%)

Query: 9   GQALTLNLISR-MAKLP-PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAA 66
           G  L  +L+ + + ++P P  A+ +F WA +Q                 SK + +     
Sbjct: 64  GDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQ-----------------SKFTHNRFTCN 106

Query: 67  QTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQAL 126
             L + + + R+  +    +S   H+  +F     P   S  Y ++++   K+    +AL
Sbjct: 107 NLLSVYVKARRVEDAHLFFQS---HMKNVF----EPDEVS--YNTLMNGFFKAGDVKKAL 157

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK---GWLFFSENRCKVELDVYSFGILIK 183
             F +M DSG+        S  I +   CS  K    W  F +       ++ S+ I+I 
Sbjct: 158 ALFGEMKDSGI----AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMID 213

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C++  ++KA  +  Q+ +    P+VV Y +LIDG  K   ++ A  LF +    G   
Sbjct: 214 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 273

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           T  TY  +I GL K G  ++    Y+ M +   + P ++TY+ LI+      +  + ++L
Sbjct: 274 TVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYEL 333

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI-SPNVITYNKLIDGFC 361
           ++EM     + +VVTYNTL+ GLCK     +A  +  +M +  +  PNVITY  LID FC
Sbjct: 334 YEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFC 393

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                  A +L  +++     P  VT+  +I+   K      A +L   +  +   P  V
Sbjct: 394 KVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSV 452

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            +  ++  + +   ++ A +++  M  SG +P + TY  L+ G C  G   +A  +++ M
Sbjct: 453 LFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512

Query: 482 WETKLEP 488
            E    P
Sbjct: 513 IEMGFPP 519



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 34/169 (20%)

Query: 432 RSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           R  D   A+E++    K S F+ + +T   L+        +++A   F S  +   EP++
Sbjct: 78  RIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDE 137

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV---------------------------- 522
           V YN ++ G+ K G+  +AL L GEM + G+                             
Sbjct: 138 VSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDM 197

Query: 523 -----PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                PN+ SY+  I  LC+  K  +A  L  QM+   + P V  Y  L
Sbjct: 198 SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGAL 246



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y  +ID   K  RL D A+    +M    + P + TF +++  + K    D+    F   
Sbjct: 385 YTVLIDRFCKVDRLGD-AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + D   F  ++ G C+   ++ A ++ +++ + G +P +  YT+L+ G C+ G   
Sbjct: 444 GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYS 503

Query: 228 RAKMLFRKIGELGLVATQH 246
            A +++ ++ E+G    +H
Sbjct: 504 DALIMYHEMIEMGFPPERH 522


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 243/484 (50%), Gaps = 3/484 (0%)

Query: 86  RSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           R  + H  Q F S  +      S +Y S+I A+   R  ++AL    +M + G+     T
Sbjct: 297 RGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVT 356

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           ++ ++    K  + D    +F E + K+  L+   +G +I   C+  ++++A  ++ ++E
Sbjct: 357 YSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREME 416

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           E G    + IY +++DG    G+ E+  ++F ++ E G   +  +Y  LI    K G   
Sbjct: 417 EQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVS 476

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              E  + M+++G+  ++ TY+ LI+ +      +  F +F++     +  +VV YN +I
Sbjct: 477 KALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNII 536

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C    +  A  ++ QM+     P   T+  +I GF  AGE  +A  +F+ ++ +G  
Sbjct: 537 TAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCI 596

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+V TYN LI    +      A  ++ EM   G+ P+E TYT L+  +    D EKAF+ 
Sbjct: 597 PTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 656

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +++++  G   DVYTY  L+   C  G M+ A  +   M    +  N  VYN++I G+ +
Sbjct: 657 FTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWAR 716

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G+ + A  L+ +M ++GL+P+I +Y+S I   C+ G   +A  ++ +M   G+KP++  
Sbjct: 717 RGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKT 776

Query: 563 YNIL 566
           Y  L
Sbjct: 777 YTTL 780



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 164/345 (47%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + GD+  A+  F  +   G+  + H Y+ LI         ++      KM+  G+  ++ 
Sbjct: 296 RRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIV 355

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY+ ++  +   G        F+E + +  + N V Y  +I   C+   +  AE L+ +M
Sbjct: 356 TYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREM 415

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  GI   +  Y+ ++DG+   G  +K   +F++LK  G  PSV++Y  LI  ++K G  
Sbjct: 416 EEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKV 475

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A ++ + M+  GI  +  TY++LI+ F++  D   AF ++    K G  PDV  Y  +
Sbjct: 476 SKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNI 535

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I   C  GNM  A  +   M + +  P    +  +I G+ + G   RAL +   M   G 
Sbjct: 536 ITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGC 595

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +P + +Y++ I  L +  +  +A  +L++M   G+ P+   Y  L
Sbjct: 596 IPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTL 640



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 193/424 (45%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G+++K     GD++ A +    +   G  P+  +Y+SLI       D+E A    RK+ 
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  T  TY++++ G  K G       ++E+ +    S +   Y  +I+ +C    + 
Sbjct: 347 EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L  EM  + +   +  Y+T++ G       ++   + D++K  G  P+VI+Y  LI
Sbjct: 407 RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK-------------------- 397
           + +   G+  KA  +   +K +G   ++ TY++LI  F K                    
Sbjct: 467 NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 526

Query: 398 ---------------AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
                           GN   A  +VR+M++    P+  T+  +I  F R+ +M +A E+
Sbjct: 527 PDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEI 586

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M++SG  P V+TY  LI GL  K  M +A  + + M    + PN+  Y  ++ GY  
Sbjct: 587 FDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYAS 646

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A +    +  +GL  ++ +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 647 LGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFV 706

Query: 563 YNIL 566
           YNIL
Sbjct: 707 YNIL 710



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 134/286 (46%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   Y  ++  Y   G +    + F+ MR R +  +   Y++LI        ++EA   
Sbjct: 282 PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHC 341

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           + +MK  GI   ++TY+ ++ GF   G  D A   F + K    S + V Y  +I A  +
Sbjct: 342 VRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQ 401

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
             N   A  LVREMEE+GI      Y  ++D +    + EK   ++  +++ GF P V +
Sbjct: 402 ICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVIS 461

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG LI+     G + +A ++   M  + ++ N   Y+M+I G+ K  +   A  +  +  
Sbjct: 462 YGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 521

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + GL P++  Y++ I   C  G    A  ++ QM K   +P+   +
Sbjct: 522 KDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%)

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           + P+   Y ++++ + + G+   A      M  RGI PS   Y+ LI ++    DME+A 
Sbjct: 280 KKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEAL 339

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
                M++ G    + TY +++ G    GN   A   F    E     N V+Y  +I+ +
Sbjct: 340 HCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAH 399

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+  N  RA  L+ EM E+G+   I  Y + +      G   +  ++ +++ + G  PSV
Sbjct: 400 CQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSV 459

Query: 561 SLYNIL 566
             Y  L
Sbjct: 460 ISYGCL 465



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   P+   Y +++  + R  DM  A + +  M+  G  P  + Y  LIH   +  +M+
Sbjct: 277 ERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDME 336

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA      M E  +E   V Y++++ G+ K GN+  A     E  EK    N   Y   I
Sbjct: 337 EALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGII 396

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              CQ      AE L+ +M + G+   + +Y+ +
Sbjct: 397 YAHCQICNMDRAEALVREMEEQGIDAPIDIYHTM 430


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 245/549 (44%), Gaps = 82/549 (14%)

Query: 19  RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKIISGR 77
           +  +  P   F  F WA  Q + H   S+     ++   ++ H H   AQ ++ K+    
Sbjct: 52  KQHRYEPFFIFHFFKWA--QSIPHYTHSLHSSWSMI-HMLTKHRHFKTAQQVLDKMAQRE 108

Query: 78  ITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGV 137
           I SS          LT L     +P   S +   I+  + KS+++  A+  F QM    +
Sbjct: 109 ILSSPSV-------LTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNL 161

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           +P            + +C+                       +L+    + G  +  ++V
Sbjct: 162 KPH-----------LHACT-----------------------VLMNSLLKDGITSMVWKV 187

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
             ++ + G  PN+ +Y  LI  C K+ D+ERA+ +                         
Sbjct: 188 YKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFIL------------------------ 223

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
                       +M++ GV P ++TYN LI  YC +G   E   + D+M    +  ++V+
Sbjct: 224 -----------NEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVS 272

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN+LI G CKE +++EA R+  ++K A   PN +TY  LIDG+C A E ++A RL   + 
Sbjct: 273 YNSLIYGFCKEGKMREAMRMFGEIKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMV 330

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           + G  P VVTYN ++R     G  + A+ L+ EM ER +    VT   LI+++ +  D+ 
Sbjct: 331 AKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLN 390

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A +  + M ++G +P+ +TY  LIHG C    ++ A +L   M +    PN   Y+ ++
Sbjct: 391 SALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             YCK+ N+   L L  E   KG   NI+ Y + I  LC+  +   AE LL  M   G+ 
Sbjct: 451 DSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGIS 510

Query: 558 PSVSLYNIL 566
               +Y  L
Sbjct: 511 GDSVIYTSL 519



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 2/346 (0%)

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F ++    L    H  TVL+  L K+G+    ++ Y++M  +GV P++Y YNCLIH
Sbjct: 149 AVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIH 208

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                  V     + +EM  + V  ++ TYNTLI   CK+    EA  + D+M+  GI+ 
Sbjct: 209 ACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINL 268

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++++YN LI GFC  G+  +A R+F ++K     P+ VTY  LI  + KA   + A  L 
Sbjct: 269 DIVSYNSLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTTLIDGYCKANEFEEALRLR 326

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M  +G+ P  VTY  ++        +  A ++   M +     D  T   LI+  C  
Sbjct: 327 EMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKI 386

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G++  A K    M E  L PN   Y  +I G+CK      A  LL  M + G  PN  +Y
Sbjct: 387 GDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTY 446

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           S  +   C+         L ++ L  G   ++SLY  L R    IE
Sbjct: 447 SWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIE 492


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 236/471 (50%), Gaps = 3/471 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +++Y+ ++ A +  R+   A+  F +M  +GV+P    +   +  + K    D+      
Sbjct: 188 AKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLG 247

Query: 166 ENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKN 223
           + R   ++   +++  ++    + G +++A  + +Q L   G   +V + T+L+ G C +
Sbjct: 248 KMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLH 307

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+I +A  LF +    G+  T  TYTVLI G    G+  + ++   +M   G+ PS Y +
Sbjct: 308 GEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEF 367

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N +I       +  +   LFD +    V  +V TY  LI  L K  +V EA  L D+MK 
Sbjct: 368 NLVIKGLLRNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKE 426

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG+ P+++T + L+ G+C+ G  D+A +L++++   G  P+ VTY  L++ + K      
Sbjct: 427 AGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDK 486

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+ EM + G++  E TY ILI+     D + +  EM       GF P   TY  +I+
Sbjct: 487 AYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIIN 546

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G    G M  A  ++  M E  + PN V Y   I GYC+      A++LL  M   G+ P
Sbjct: 547 GFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHP 606

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +IA+Y++ I + C+ G    A   L  +LK GL P+V++YN       N++
Sbjct: 607 DIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLK 657



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 239/538 (44%), Gaps = 79/538 (14%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD-----KGW 161
           R+Y   I    K R +D+A+    +M ++G++PR  T+NS++  ++K    D     K  
Sbjct: 224 RVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQ 283

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +  +   ++DV+    L++G C  G++ KA ++ ++    G +P  V YT LI GC 
Sbjct: 284 MLLATGK---KMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCD 340

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G  +    L R++ E GL+ + + + ++I GL +N   +D    ++ +   GV P ++
Sbjct: 341 AEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVF 399

Query: 282 TYNCLI---------HE--------------------------YCNEGKVSEGFKLF--- 303
           TY CLI         HE                          YC +G + E  KL+   
Sbjct: 400 TYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM 459

Query: 304 --------------------------------DEMRHREVACNVVTYNTLICGLCKEMRV 331
                                           +EM    V+C   TYN LI GLC   RV
Sbjct: 460 PGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRV 519

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            E + +L +    G  P  +TYN +I+GF  AG    A  ++ Q+   G +P++VTY   
Sbjct: 520 CEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSF 579

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  + +     +A  L+  M   GI P    Y   I+ F +  +M  A     L+ K G 
Sbjct: 580 IDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGL 639

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           +P+V  Y   + G      M EASK + SM + ++  +  +Y  +I G+ K GN   AL 
Sbjct: 640 TPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALE 699

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L  EM     +P+  ++++    LC+ G    A+ LL+ M +L + P+   YN+L  A
Sbjct: 700 LYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINA 757



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 214/450 (47%), Gaps = 8/450 (1%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI 180
           ++D+      QM++ G+ P +  FN ++  ++++  ++     F         DV+++G 
Sbjct: 344 MTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGC 403

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI    +   +++A  + ++++E G  P++V   SL+ G C+ G ++ A  L+ ++   G
Sbjct: 404 LIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKG 463

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
               + TYT L+ G  K       +    +M  NGVS   YTYN LI+  C   +V E  
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCE-- 521

Query: 301 KLFDEMRHREVACNVV----TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
              DEM  R V+   V    TYN++I G  K   +  A  +  QM   GI+PN++TY   
Sbjct: 522 --VDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSF 579

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG+C     D A +L   ++ NG  P +  YN  I  F K GN   A   +  + + G+
Sbjct: 580 IDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGL 639

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP+   Y   +  +     M +A + Y  M K   + D   Y  LI G    GN+  A +
Sbjct: 640 TPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALE 699

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L++ M      P+D  +  +  G C+ G+   A RLL +M    + PN  +Y+  I    
Sbjct: 700 LYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHI 759

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +DGK  EA  L ++ML  G+ P  + YNI 
Sbjct: 760 RDGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 174/363 (47%), Gaps = 2/363 (0%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  P+    T L+    +      A  LF ++   G  A    Y V++       +  D 
Sbjct: 148 GVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDA 207

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              +++M   GV P    Y   I   C         ++  +MR   +     TYN+++  
Sbjct: 208 VRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDV 267

Query: 325 LCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           L K  R+ EA RL DQM +A G   +V     L+ G+C  GE  KA  LF++   +G +P
Sbjct: 268 LVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTP 327

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           + VTY VLI+     G +     L R+M E+G+ PS   + ++I   +R+   E A  ++
Sbjct: 328 TNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALF 387

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            L+  +G  PDV+TYG LIH L     + EA  L++ M E  ++P+ V  + ++ GYC++
Sbjct: 388 DLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEK 446

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    AL+L  EM  KG  PN  +Y++ +    +   + +A  LLN+M + G+      Y
Sbjct: 447 GCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY 506

Query: 564 NIL 566
           NIL
Sbjct: 507 NIL 509



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 2/144 (1%)

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M  RG+ P   + T L+ +  R      A  ++  M+  G+  D   Y V++   C+ G
Sbjct: 143 RMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CVVG 201

Query: 470 NMK-EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
            M  +A +LF+ M    ++P++ VY + I G CK  ++ RA+++LG+M E GL P   +Y
Sbjct: 202 RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261

Query: 529 SSTIGVLCQDGKWPEAEVLLNQML 552
           +S + VL + G+  EA  L +QML
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQML 285


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 223/458 (48%), Gaps = 42/458 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K+ +       F Q L  GV+     F+S +   +KS       + +    
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C+ +  +V ++ ILIKG C+ G + +AF +  Q+ + G  P++V Y+SLIDG CK G++ 
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM---------------- 271
               L+  + ++G       Y VL+ GL K GL      F  KM                
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 272 ----QLN---------------GVSPSLYTYNCLIH------EYCNEGKVSEGFKLFDEM 306
               +LN               G+ P + T+  ++        +C   K + G +LFD M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +  +++ ++   N +I  L K  R+++A +  + +    + P+++TYN +I G+C     
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A R+F  LK     P+ VT  +LI    K  +   A  +   M E+G  P+ VTY  L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +D F +S D+E +F+++  MQ+ G SP + +Y ++I GLC +G + EA+ +F+   + KL
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            P+ V Y ++I GYCK G    A  L   M   G+ P+
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 227/475 (47%), Gaps = 7/475 (1%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P      + ++I+   K    D+A   F  M   G+ P    +++L+    K+     G 
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
             FS+   K V+LDV  F   I    ++GDL  A  V  ++   G SPNVV YT LI G 
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G I  A  ++ +I + G+  +  TY+ LI G  K G  + GF  YE M   G  P +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             Y  L+     +G +    +   +M  + +  NVV +N+LI G C+  R  EA ++   
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 341 MKMAGISPNVITYNKLI------DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           M + GI P+V T+  ++      D FC   +     +LF+ ++ N  S  +   NV+I  
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K    + AS     + E  + P  VTY  +I  +     +++A  ++ L++ + F P+
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             T  +LIH LC   +M  A ++F+ M E   +PN V Y  ++  + K  +   + +L  
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM EKG+ P+I SYS  I  LC+ G+  EA  + +Q +   L P V  Y IL R 
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 216/434 (49%), Gaps = 16/434 (3%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           + T+ + + SG + ++S   + +LC        S N VT    Y  +I    +     +A
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQ-----GISPNVVT----YTILIKGLCQDGRIYEA 410

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKG 184
              + Q+L  G+ P   T++SL+    K  +   G+  + +  +     DV  +G+L+ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
             + G +  A     ++       NVV++ SLIDG C+    + A  +FR +G  G+   
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530

Query: 245 QHTYT-VLICGLFKNGLQKD-----GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
             T+T V+   + ++   K      G + ++ MQ N +S  +   N +IH      ++ +
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             K F+ +   ++  ++VTYNT+ICG C   R+ EAER+ + +K+    PN +T   LI 
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C   + D A R+F+ +   G  P+ VTY  L+  FSK+ + + +  L  EM+E+GI+P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S V+Y+I+ID   +   +++A  ++     +   PDV  Y +LI G C  G + EA+ L+
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770

Query: 479 NSMWETKLEPNDVV 492
             M    ++P+D++
Sbjct: 771 EHMLRNGVKPDDLL 784



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 196/414 (47%), Gaps = 41/414 (9%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +L+ + + G +PNVV + +LI+G CK G+++RA  LF+ + + G+      Y+ LI 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G FK G+   G + + +    GV   +  ++  I  Y   G ++    ++  M  + ++ 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVVTY  LI GLC++ R+ EA  +  Q+   G+ P+++TY+ LIDGFC  G     F L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAG--------NSKM---------------------- 403
             +   G  P VV Y VL+   SK G        + KM                      
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 404 -----ASDLVREMEERGITPSEVTYT------ILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                A  + R M   GI P   T+T      I+ D+F +        +++ LMQ++  S
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D+    V+IH L     +++ASK FN++ E K+EP+ V YN MI GYC       A R+
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +      PN  + +  I VLC++     A  + + M + G KP+   Y  L
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 191/376 (50%), Gaps = 6/376 (1%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           K F VL  + +     +V  +  L++ CC+ G +++A  +F    +LG+V  Q +   ++
Sbjct: 131 KDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML 188

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE--YCNEGKVSEGFKLFDEMRHRE 310
             L  +       + ++K+   G+ PS  + +  + +  +C +G+V++       +  R 
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERG 247

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               +V+ N ++ GL  + +++ A RLL  +   G +PNV+T+  LI+GFC  GE D+AF
Sbjct: 248 FRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            LF  ++  G  P ++ Y+ LI  + KAG   M   L  +   +G+    V ++  ID +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           V+S D+  A  +Y  M   G SP+V TY +LI GLC  G + EA  ++  + +  +EP+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V Y+ +I G+CK GN      L  +M + G  P++  Y   +  L + G    A     +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 551 MLKLGLKPSVSLYNIL 566
           ML   ++ +V ++N L
Sbjct: 487 MLGQSIRLNVVVFNSL 502


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 264/556 (47%), Gaps = 18/556 (3%)

Query: 25  PLKAFSLFNWASRQG-LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P +A   F  A+R+  + HT  S + +L L    M  H        +  ++  +I  ++ 
Sbjct: 149 PAEALERFRSAARRPRVVHTTASCNYMLDL----MRDHGRVGDMAEVFDVMQRQIVKANV 204

Query: 84  -TPRSLLCHLTQLFPSSSNPVTKSRLYES--IIDAH---------LKSRLSDQALFYFHQ 131
            T  ++   L       S PV    + E+  +++A+         +KS    +AL  +  
Sbjct: 205 GTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKV 264

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M+  GV P   T++ L++   K    +   WL        V+ +VYS+ I I+   +A  
Sbjct: 265 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARR 324

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            ++A+ +L ++E  G  P+V+ +T LI   C  G I  AK +F K+ +      + TY  
Sbjct: 325 FDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 384

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+     NG  +   E +  M+ +G + ++  Y  +I   C  G+V E  ++FDEM+ + 
Sbjct: 385 LLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 444

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +     +YN+LI G  K  R  +A  L   M + G  PN  T+   I+ +  +GE+ KA 
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAI 504

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + +  +KS G  P VV  N ++   +K+G   MA  +  E++  G++P  +TYT++I   
Sbjct: 505 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 564

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++   ++A +++  M ++   PDV     LI  L   G   EA ++F  + E  LEP D
Sbjct: 565 SKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN ++ G  +EG     + LL EM      PN+ +Y++ +  LC++G   +A  +L  
Sbjct: 625 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 684

Query: 551 MLKLGLKPSVSLYNIL 566
           M   G  P +S YN +
Sbjct: 685 MTTKGCIPDLSSYNTV 700



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 217/462 (46%), Gaps = 1/462 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +I+D   K+   + AL   + M   G  P  +++N+++  ++K   +++ +  F + +
Sbjct: 662  YNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 721

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-LEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   ++    + G + +A  ++ +   + G   +     SL++G  K    E
Sbjct: 722  KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTE 781

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++      I   G+         LI  L K     +  E  +K +  GVS    +YN LI
Sbjct: 782  KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLI 841

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +E  +     LF EM+      +  TYN L+  + K MR++E  ++ ++M   G  
Sbjct: 842  CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 901

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               +TYN +I G   +   ++A  L+  L S G SP+  TY  L+    KAG  + A +L
Sbjct: 902  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 961

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              EM E G   +   Y IL++    + + EK   ++  M   G +PD+ +Y ++I  LC 
Sbjct: 962  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1021

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G + +    F  + E  LEP+ + YN++I G  K      A+ L  EM +KG+VPN+ +
Sbjct: 1022 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1081

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1082 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 222/480 (46%), Gaps = 41/480 (8%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  ++ A  K R  +  L+   +M   GV+P   ++   +  + ++  FD+ + 
Sbjct: 271 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYR 330

Query: 163 FFSE---NRCKVELDVYSFGILIKGCCEAGDLNKA------------------------- 194
             +E     CK   DV +  +LI+  C+AG ++ A                         
Sbjct: 331 ILAEMENEGCKP--DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 388

Query: 195 ----------FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                      E+ N ++  G++ NVV YT++ID  C+ G +  A  +F ++ + G+V  
Sbjct: 389 FADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 448

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q++Y  LI G  K     D  E ++ M ++G  P+ YT+   I+ Y   G+  +  + ++
Sbjct: 449 QYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 508

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  G+SP+ ITY  +I     A 
Sbjct: 509 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 568

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A ++F  +  N   P V+  N LI    KAG    A  +  +++E  + P++ TY 
Sbjct: 569 KFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYN 628

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L+    R   +++   +   M  S + P++ TY  ++  LC  G + +A  +  SM   
Sbjct: 629 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 688

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+   YN +I+G  KE     A  +  +M +K L+P+ A+  + +    + G   EA
Sbjct: 689 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEA 747



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 187/380 (49%), Gaps = 3/380 (0%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           GD+ + F+V+   +      NV  + ++  G    G +  A +    + E G+V   +TY
Sbjct: 186 GDMAEVFDVM---QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 242

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             L+  L K+G  ++  E Y+ M ++GV PS+ TY+ L+  +     V     L  EM  
Sbjct: 243 NGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 302

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  NV +Y   I  L +  R  EA R+L +M+  G  P+VIT+  LI   CDAG    
Sbjct: 303 HGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISD 362

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  +F ++K + Q P  VTY  L+  F+  G S+   ++   M+  G   + V YT +ID
Sbjct: 363 AKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVID 422

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           +  +   + +A EM+  M++ G  P+ Y+Y  LI G        +A +LF  M     +P
Sbjct: 423 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKP 482

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N   + + I  Y K G S +A++    M  KG+VP++ + ++ +  L + G+   A+ + 
Sbjct: 483 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 542

Query: 549 NQMLKLGLKPSVSLYNILYR 568
           +++  +G+ P    Y ++ +
Sbjct: 543 HELKAMGVSPDTITYTMMIK 562



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 221/506 (43%), Gaps = 77/506 (15%)

Query: 100  SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
            +N V    +  S+ID   K+   D+A   F+Q+ +  + P   T+N+LL  +        
Sbjct: 583  NNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGL-------- 634

Query: 160  GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM---GFSPNVVIYTSL 216
                                         G   K  EV++ LEEM    + PN++ Y ++
Sbjct: 635  -----------------------------GREGKVKEVMHLLEEMYHSNYPPNLITYNTI 665

Query: 217  IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
            +D  CKNG +  A  +   +   G +    +Y  +I GL K     + F  + +M+   +
Sbjct: 666  LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVL 724

Query: 277  SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE-------------------------- 310
             P   T   ++  +   G + E   +  E   +                           
Sbjct: 725  IPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSI 784

Query: 311  -----VACNVVTYN-----TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
                 +A + +T +      LI  LCK+ +  EA  L+ + K  G+S    +YN LI G 
Sbjct: 785  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGL 844

Query: 361  CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             D    D A  LF ++K  G  P   TYN+L+ A  K+   +    +  EM  +G   + 
Sbjct: 845  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 904

Query: 421  VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            VTY  +I   V+S  +E+A ++Y  +   GFSP   TYG L+ GL   G +++A  LFN 
Sbjct: 905  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964

Query: 481  MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            M E   + N  +YN+++ G+   GN+ +   L  +M ++G+ P+I SY+  I  LC+ G+
Sbjct: 965  MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1024

Query: 541  WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +      Q+L++GL+P +  YN+L
Sbjct: 1025 LNDGLTYFRQLLEMGLEPDLITYNLL 1050



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 221/489 (45%), Gaps = 26/489 (5%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---- 157
           P  + R  E +I A   +    +AL  F     +  RPR       ++    SC++    
Sbjct: 129 PRDERRAAEDVIHALRSADGPAEALERFRS---AARRPR-------VVHTTASCNYMLDL 178

Query: 158 --------DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
                   D   +F    R  V+ +V +F  +  G    G L  A   L  ++E G   N
Sbjct: 179 MRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLN 238

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
              Y  L+    K+G    A  +++ +   G+V +  TY+VL+    K    +       
Sbjct: 239 AYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR 298

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+ +GV P++Y+Y   I       +  E +++  EM +     +V+T+  LI  LC   
Sbjct: 299 EMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAG 358

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           R+ +A+ +  +MK +   P+ +TY  L+D F D GE+     ++N +K++G + +VV Y 
Sbjct: 359 RISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYT 418

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            +I A  + G    A ++  EM+++GI P + +Y  LI  F+++D    A E++  M   
Sbjct: 419 AVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIH 478

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P+ YT+ + I+     G   +A + +  M    + P+ V  N ++FG  K G    A
Sbjct: 479 GPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMA 538

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV----SLYNI 565
            R+  E+   G+ P+  +Y+  I    +  K+ EA  +   M++    P V    SL + 
Sbjct: 539 KRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDT 598

Query: 566 LYRAKNNIE 574
           LY+A    E
Sbjct: 599 LYKAGRGDE 607



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 4/417 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--N 167
            +I+ + +K  L  +AL    +  L  G +   ++ +SL+  ++K    +K  + F+E   
Sbjct: 733  TILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKS-IEFAEIIA 791

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + LD +    LIK  C+     +A E++ + +  G S     Y SLI G      I+
Sbjct: 792  SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLID 851

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A+ LF ++ ELG    + TY +L+  + K+   ++  +  E+M   G   +  TYN +I
Sbjct: 852  IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 911

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                   ++ +   L+  +  +  +    TY  L+ GL K  R+++AE L ++M   G  
Sbjct: 912  SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 971

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             N   YN L++G   AG T+K   LF  +   G +P + +Y ++I    KAG        
Sbjct: 972  ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTY 1031

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             R++ E G+ P  +TY +LID   +S  +E+A  +++ MQK G  P++YTY  LI  L  
Sbjct: 1032 FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1091

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
             G   EA K++  +     +PN   YN +I GY   G++  A    G M   G +PN
Sbjct: 1092 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1148



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 3/333 (0%)

Query: 105  KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
            K+  Y S+I   +   L D A   F +M + G  P   T+N LL  + KS   ++     
Sbjct: 833  KTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 892

Query: 165  SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K 
Sbjct: 893  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 952

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G IE A+ LF ++ E G  A    Y +L+ G    G  +     ++ M   G++P + +Y
Sbjct: 953  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1012

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              +I   C  G++++G   F ++    +  +++TYN LI GL K  R++EA  L ++M+ 
Sbjct: 1013 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1072

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             GI PN+ TYN LI     AG+  +A +++ +L + G  P+V TYN LIR +S +G++  
Sbjct: 1073 KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1132

Query: 404  ASDLVREMEERGITPSEVTYTI--LIDSFVRSD 434
            A      M   G  P+  T  I  L+ +F++ D
Sbjct: 1133 AYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGD 1165



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 7/326 (2%)

Query: 136  GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCCEAGDL 191
            GV  ++ ++NSL+  ++     D     F+E +   EL    D +++ +L+    ++  +
Sbjct: 829  GVSLKTGSYNSLICGLVDENLIDIAEGLFAEMK---ELGCGPDEFTYNLLLDAMGKSMRI 885

Query: 192  NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             +  +V  ++   G+    V Y ++I G  K+  +E+A  L+  +   G   T  TY  L
Sbjct: 886  EEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPL 945

Query: 252  ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
            + GL K G  +D    + +M   G   +   YN L++ +   G   +   LF +M  + +
Sbjct: 946  LDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 1005

Query: 312  ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
              ++ +Y  +I  LCK  ++ +      Q+   G+ P++ITYN LIDG   +   ++A  
Sbjct: 1006 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1065

Query: 372  LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            LFN+++  G  P++ TYN LI    KAG +  A  +  E+  +G  P+  TY  LI  + 
Sbjct: 1066 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYS 1125

Query: 432  RSDDMEKAFEMYSLMQKSGFSPDVYT 457
             S   + A+  Y  M   G  P+  T
Sbjct: 1126 VSGSTDSAYAAYGRMIVGGCLPNSST 1151


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 255/542 (47%), Gaps = 47/542 (8%)

Query: 28  AFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           A   F W+    G+ H+ +SIS ++ +L+S   ++        ++K  SG+        R
Sbjct: 196 ALYFFRWSELWIGVAHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGK-------ER 248

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP------- 139
           SL   +  LF +  +      ++  +ID  +K R  D AL   +++   G+ P       
Sbjct: 249 SLCLVIKDLFETRIDRRVLETVFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCIS 308

Query: 140 -----------------------RSNTFNSLLI--FVIKSCS---FDKGW-LFFSENRCK 170
                                  R    N+ L+  F+ K CS   FDKGW L        
Sbjct: 309 LVEEILRAHGLELAREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYG 368

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D+ +F + I   C+AG L +A  VL +L+  G S + V  +S+IDG CK G  E A 
Sbjct: 369 IRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 428

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L   I    L      Y+  +  +   G        ++++   G+ P  Y Y  +I  Y
Sbjct: 429 KL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGY 485

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G+  + F+ F  +       +++TY  LI    K   + +AE +   MK  G+ P+V
Sbjct: 486 CTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDV 545

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN L+ G+    + +K F L ++++S G SP V TYN+LI +    G    A++++ E
Sbjct: 546 VTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISE 605

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  RG  PS + +T +I    +  D ++AF ++  M      PDV T   L+HG C    
Sbjct: 606 LIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQR 665

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           M++A  LF+ + +  L+P+ V+YN +I GYC  G+  +A  L+G M ++G++PN +++ +
Sbjct: 666 MEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 725

Query: 531 TI 532
            +
Sbjct: 726 LV 727



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +++ +   +   C  GD+ +A  +  ++ E+G  P+   YT++IDG C  G  ++A   F
Sbjct: 439 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFF 498

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G   +  TYT+LI    K G   D    +  M+  G+ P + TYN L++ Y   
Sbjct: 499 GALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKT 558

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++++ F+L DEMR   ++ +V TYN LI  +     V EA  ++ ++   G  P+ + +
Sbjct: 559 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAF 618

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I G    G+  +AF L+  +      P VVT + L+  + +A   + A  L  ++ +
Sbjct: 619 TDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLD 678

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            G+ P  V Y  LI  +    D+EKA E+  LM + G  P+  T+  L+ GL
Sbjct: 679 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGL 730



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 3/243 (1%)

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           KE +V  A +L  ++   GI P+      L++    A   + A      + S G+  +  
Sbjct: 280 KERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSRGRHLNAA 339

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
             ++ IR +   G      +L+  M++ GI P  V +T+ ID   ++  + +A  +   +
Sbjct: 340 LLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKL 399

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +  G S D  +   +I G C  G  +EA KL +S    +L PN  VY+  +   C  G+ 
Sbjct: 400 KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDM 456

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            RA  +  E+ E GL+P+   Y++ I   C  G+  +A      +LK G  PS+  Y +L
Sbjct: 457 LRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLL 516

Query: 567 YRA 569
             A
Sbjct: 517 IGA 519



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +I + +     D+A     +++  G  P +  F  ++  + K   F + + L+F   
Sbjct: 583 YNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMA 642

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             +V+ DV +   L+ G C A  + KA  + ++L + G  P+VV+Y +LI G C  GDIE
Sbjct: 643 DLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIE 702

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGL 255
           +A  L   + + G++  + T+  L+ GL
Sbjct: 703 KACELIGLMVQRGMLPNESTHHALVVGL 730


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/392 (33%), Positives = 204/392 (52%), Gaps = 2/392 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++GILI   C+AG +++A   L +++ MG   ++V+YTSLI G C  G+++R K LF ++
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G      TY  LI G  K G  K+  E +E M   GV P++YTY  LI   C  GK 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  +L + M  ++   N VTYN +I  LCK+  V +A  +++ MK     P+ ITYN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 357 IDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           + G C  G+ D+A +L   +   S+   P V++YN LI    K      A D+   + E+
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                 VT  IL++S +++ D+ KA E++  +  S    +  TY  +I G C  G +  A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M  ++L+P+   YN ++   CKEG+  +A RL  EM      P++ S++  I  
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + G    AE LL  M + GL P +  Y+ L
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 3/457 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    + +  ++AL   ++M  SG      T+  L+    K+   D+   F  E +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D+  +  LI+G C+ G+L++   + +++ E G SP  + Y +LI G CK G ++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  + E G+    +TYT LI GL   G  K+  +    M      P+  TYN +I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
           ++ C +G V++  ++ + M+ R    + +TYN L+ GLC +  + EA +LL  M    + 
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+VI+YN LI G C      +A  +++ L     +   VT N+L+ +  KAG+   A 
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L +++ +  I  +  TYT +ID F ++  +  A  +   M+ S   P V+ Y  L+  L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G++ +A +LF  M      P+ V +N+MI G  K G+   A  LL  M+  GL P++
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            +YS  I    + G   EA    ++M+  G +P   +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 235/481 (48%), Gaps = 55/481 (11%)

Query: 101 NPVTKSRLYESI--IDAHLKSRLSD------QALFYFHQMLDSGVRPRSNTFNSLLIFVI 152
           NP   S+L  +    +  L+S   D       A+  F Q +DSG    +   N+L+  ++
Sbjct: 25  NPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLV 83

Query: 153 KSCSFDKGWLFFSENRCKVELDVY----SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
           +S + +   L FS  R  +E D +    S   L++   +      AF VL  + + GF+ 
Sbjct: 84  RSRNHE---LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           NV  +  L+ G C+N +  +A  L R+                                 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE--------------------------------- 167

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
             M+ N + P +++YN +I  +C   ++ +  +L +EM+    + ++VT+  LI   CK 
Sbjct: 168 --MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            ++ EA   L +MK  G+  +++ Y  LI GFCD GE D+   LF+++   G SP  +TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N LIR F K G  K AS++   M ERG+ P+  TYT LID        ++A ++ +LM +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
               P+  TY ++I+ LC  G + +A ++   M + +  P+++ YN+++ G C +G+   
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 509 ALRLLGEM--NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNI 565
           A +LL  M  +     P++ SY++ I  LC++ +  +A  + + ++ KLG    V+  NI
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT-TNI 464

Query: 566 L 566
           L
Sbjct: 465 L 465



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 209/470 (44%), Gaps = 50/470 (10%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE----- 166
           +IDA  K+   D+A+ +  +M   G+      + SL+         D+G   F E     
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C +     ++  LI+G C+ G L +A E+   + E G  PNV  YT LIDG C  G 
Sbjct: 278 DSPCAI-----TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A  L   + E        TY ++I  L K+GL  D  E  E M+     P   TYN 
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQEAERLLD---- 339
           L+   C +G + E  KL   M         +V++YN LI GLCKE R+ +A  + D    
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452

Query: 340 -------------------------------QMKMAGISPNVITYNKLIDGFCDAGETDK 368
                                          Q+  + I  N  TY  +IDGFC  G  + 
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  +++ +   PSV  YN L+ +  K G+   A  L  EM+     P  V++ I+ID
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             +++ D++ A  +   M ++G SPD++TY  LI+     G + EA   F+ M ++  EP
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632

Query: 489 NDVVYNMMIFGYC-KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           +  + +  +  YC  +G + +   L+ ++ +K +V +     + +  +C 
Sbjct: 633 DAHICD-SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 168/331 (50%), Gaps = 10/331 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N VT    Y  II+   K  L   A+     M     RP + T+N LL  +      D+ 
Sbjct: 351 NAVT----YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406

Query: 161 ----WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
               +L   ++    + DV S+  LI G C+   L++A ++ + L E   + + V    L
Sbjct: 407 SKLLYLMLKDSS-YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++   K GD+ +A  L+++I +  +V    TYT +I G  K G+         KM+++ +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            PS++ YNCL+   C EG + + ++LF+EM+      +VV++N +I G  K   ++ AE 
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL  M  AG+SP++ TY+KLI+ F   G  D+A   F+++  +G  P     + +++   
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645

Query: 397 KAGNSKMASDLVREMEERGIT-PSEVTYTIL 426
             G +   ++LV+++ ++ I    E+T T++
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 15/236 (6%)

Query: 346 ISPNVITYNKLIDGFCDAG------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           ++P V  Y+KL++ F +              +   A  +F Q   +G S +    N++ +
Sbjct: 24  LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAK 81

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              ++ N ++A    R+M E     + V+ + L++ +V+      AF + +LM K GF+ 
Sbjct: 82  -LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +VY + +L+ GLC      +A  L   M    L P+   YN +I G+C+     +AL L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            EM   G   ++ ++   I   C+ GK  EA   L +M  +GL+  + +Y  L R 
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 94/201 (46%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF  + ++       + V+ + L+  + +   +  A  ++  M +RG   +   + IL+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R+ +  KA  +   M+++   PDV++Y  +I G C    +++A +L N M  +    
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V + ++I  +CK G    A+  L EM   GL  ++  Y+S I   C  G+    + L 
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           +++L+ G  P    YN L R 
Sbjct: 271 DEVLERGDSPCAITYNTLIRG 291



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S S  V  S  Y ++ID   K+ + + A     +M  S ++P    +N LL  + K  S 
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D+ W  F E  R     DV SF I+I G  +AGD+  A  +L  +   G SP++  Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           I+   K G ++ A   F K+ + G     H
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAH 635


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 225/468 (48%), Gaps = 37/468 (7%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           P     N+LL  ++K+  FD  W  + +   +     V ++GIL+  CC  GD + A +V
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61

Query: 198 LNQLEEMGFSPNVVIY--------------------------TSLIDGCCKNGDIERAKM 231
            +++ E G  PNVVIY                           +L+DG    GD++R   
Sbjct: 62  FDEMLERGIEPNVVIYGQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFY 121

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L+  + + GL     T+  LI  L K G  K     +  M    V P+ + YN LIH YC
Sbjct: 122 LYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYC 181

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
             G + E   L  EM    +  +VVTYN LI GLC   R++EA  L+++M    +  N +
Sbjct: 182 KAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSV 241

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            +N +IDG C  G+ +KA  + +Q+      P+V+T+++LI  F   GN + A  L  EM
Sbjct: 242 XFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEM 301

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +GI P  VTYT LID   +  + ++AF ++  M  +G SP+++T   +I GL   G  
Sbjct: 302 VIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRT 361

Query: 472 KEASKLF----------NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
            +A K+F          + M      PN ++Y ++I G C++G  ++A +   EM   G 
Sbjct: 362 NDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGF 421

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            P++  Y + +    Q     +  +L   M+K+G+  +  +Y +L R 
Sbjct: 422 KPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRG 469



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 11/329 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSEN 167
           + ++ID   K      A   F  M    V P  + +NSL+    K+    +  WL     
Sbjct: 138 FATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEME 197

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           RC +  DV ++ ILIKG C+   L +A  ++ +++E+    N V +  +IDGCCK GD+E
Sbjct: 198 RCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDME 257

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +  ++ E  +     T+++LI G    G  +     Y +M + G+ P + TY  LI
Sbjct: 258 KAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALI 317

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL--------- 338
             +C  G   E F+L  EM    ++ N+ T + +I GL K+ R  +A ++          
Sbjct: 318 DGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYP 377

Query: 339 -DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            D+M     SPN + Y  LI G C+ G   KA + F ++K NG  P ++ Y  +++A  +
Sbjct: 378 GDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQ 437

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTIL 426
           + +      L  +M + G+  +   Y +L
Sbjct: 438 SKHMIDVMMLHADMVKMGVIQNTFIYRVL 466



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 15/181 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID H K   + +A     +MLD+G+ P   T + ++  ++K    +     F E  
Sbjct: 313 YTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKT 372

Query: 169 -------------CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
                        C     +Y+  ILI+G CE G + KA +   +++  GF P++++Y +
Sbjct: 373 GAGYPGDKMDSRFCSPNSMMYA--ILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVT 430

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           ++    ++  +    ML   + ++G++     Y VL  G  +NG  K      E +   G
Sbjct: 431 MLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCSEYLMEYG 490

Query: 276 V 276
           +
Sbjct: 491 I 491


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 199/375 (53%), Gaps = 1/375 (0%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           CE+G +N A  V  ++ E   SP+ V+Y ++++G  K G I+    L+  +G  G     
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNV 59

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            ++  ++ GLF NG   + F  +E M+ +G      TY  L+H +C  G  ++   + + 
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
            +    A +   Y+ +I GLCK  ++ +A  +L+ M  +G  PN   YN LI+G   A +
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            + A R+F +L +   SP++VTYN LI    K      A DLV+EM E+G  PS +TY++
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSL 239

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI    +   +E A ++++ +   GF PDV  + +LIHGLC  G  + AS+L+  M    
Sbjct: 240 LIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWN 299

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             PN V YN ++ G+ K G++  AL +   +   GL+P+I SY+ T+  LC   +   A 
Sbjct: 300 CAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAI 359

Query: 546 VLLNQMLKLGLKPSV 560
           + LN  +   + P+V
Sbjct: 360 LFLNDAVTKNIVPTV 374



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 10/343 (2%)

Query: 129 FHQMLDSGVRPRSNTFNSLL-----IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           + +M +S + P +  +N++L        IK+C FD   L   E       +V SF  +++
Sbjct: 13  YKEMAESKISPDAVVYNAMLNGFFKAGRIKNC-FDLWELMGREG----SRNVASFNTMMR 67

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G    G++++ F +   ++E GF  +   Y  L+ G CKNG   ++  +     + G   
Sbjct: 68  GLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGAL 127

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
               Y+ +I GL K G           M  +G  P+   YN LI+      K  +  ++F
Sbjct: 128 DAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVF 187

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            E+  R  +  +VTYNTLI GLCK  R  EA  L+ +M   G +P+VITY+ LI G C  
Sbjct: 188 KELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQD 247

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            + + A +L+NQ+ S G  P V  +N+LI      G ++ AS+L  +M      P+ VTY
Sbjct: 248 HKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTY 307

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
             L++ F +  D   A  +++ + ++G  PD+ +Y + + GLC
Sbjct: 308 NTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLC 350



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 177/349 (50%), Gaps = 1/349 (0%)

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G I  A+ +++++ E  +      Y  ++ G FK G  K+ F+ +E M   G S ++
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNV 59

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            ++N ++    N G+V E F +++ M+      +  TY  L+ G CK     ++  +L+ 
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            K  G + +   Y+ +I G C  G+ DKA  + N +  +G  P+   YN LI     A  
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  + +E+  R  +P+ VTY  LI+   + +   +A+++   M + G++P V TY +
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSL 239

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC    ++ A +L+N +     +P+  ++N++I G C  G +  A  L  +MN   
Sbjct: 240 LIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWN 299

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             PN+ +Y++ +    + G    A V+  ++L+ GL P +  YNI  + 
Sbjct: 300 CAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKG 348



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 129/250 (51%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD +++  +I G C+ G L+KA  VLN + E G  PN  +Y +LI+G       E A  +
Sbjct: 127 LDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRV 186

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F+++G      T  TY  LI GL K     + ++  ++M   G +PS+ TY+ LI   C 
Sbjct: 187 FKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQ 246

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           + KV    +L++++  +    +V  +N LI GLC   + + A  L   M     +PN++T
Sbjct: 247 DHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVT 306

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN L++GF   G+T  A  ++ ++  NG  P +++YN+ ++         +A   + +  
Sbjct: 307 YNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAV 366

Query: 413 ERGITPSEVT 422
            + I P+ +T
Sbjct: 367 TKNIVPTVIT 376



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I    K    D+A+   + M++SG +P +  +N+L+  ++ +  F+     F E  
Sbjct: 132 YSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELG 191

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C   +  Y+   LI G C+     +A++++ ++ E G++P+V+ Y+ LI G C++  
Sbjct: 192 TRHCSPTIVTYN--TLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHK 249

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A  L+ ++   G       + +LI GL   G  +   E Y  M     +P+L TYN 
Sbjct: 250 VEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNT 309

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  +   G       ++  +    +  ++++YN  + GLC   R+  A   L+      
Sbjct: 310 LMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKN 369

Query: 346 ISPNVIT 352
           I P VIT
Sbjct: 370 IVPTVIT 376


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 235/500 (47%), Gaps = 60/500 (12%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVEL------ 173
           D+AL +   M   GV P   T+N+L           KG+L     S  R  V+       
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTL----------AKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 174 --DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
             D+ ++  LI G C+ G++ +A ++  +    GF  NV+ Y  L+   CK G IE A  
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALT 432

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT--------- 282
           LF ++  L L      Y++LI GL K G  +  ++ YE+M+L    P  +          
Sbjct: 433 LFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLF 492

Query: 283 --------------------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
                                     YN +I  Y     ++E  +L+ +M  R +  +VV
Sbjct: 493 KNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVV 552

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           T+NTLI G C+   + EA ++L+ +++ G+ P+V+TY  L++ +C+ G   + F   +++
Sbjct: 553 TFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM 612

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           ++N   P+ VTY VLI+   +      +  L+  M  +G+ P  VTY  +I  F +  ++
Sbjct: 613 EANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEI 672

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            KA ++Y++M      P   TY VLI+ LC+ G++K+  ++  S+ +  +      Y  +
Sbjct: 673 TKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTI 732

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  +C +G   +AL    +M  KG V +I  YS+ I  LC+ G   EA+     ML  G+
Sbjct: 733 IKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGV 792

Query: 557 KPSV----SLYNILYRAKNN 572
            P      ++ N  ++  NN
Sbjct: 793 TPDPEICKTVLNAFHQQGNN 812



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 270/626 (43%), Gaps = 85/626 (13%)

Query: 16  LISRMAKLPPLKAFSLFNW-ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII 74
           ++ R+  L P  A + F +  +  G +H+  S  ++  +L  K            +  +I
Sbjct: 88  VLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKE-------LDSVI 140

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
              I        S++C L  L     N  +   +++ +  A+ +  +   ALF   +M D
Sbjct: 141 KNLIVDQGLGSASIICDL--LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
              +    T+NSLL  +  +   D  W  ++E +         +  ILI G CE   L  
Sbjct: 199 LNFQASVPTYNSLLHNMRHT---DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLED 255

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A   L+   ++   P++V   +++   CK G I+ A+  F  + + GL+    +Y +L+ 
Sbjct: 256 AISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLH 314

Query: 254 GL-----------FKNGLQKDGFE------------------------FYEKMQLNGVSP 278
           GL           F + ++K G E                          +KM L G++P
Sbjct: 315 GLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNP 374

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            L TY  LI  +C  G + E  KL  E   R    NV+ YN L+  LCK  R++EA  L 
Sbjct: 375 DLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP--------------- 383
           D+M+   + P+ I Y+ LI G C  G   +A++L+ Q++   + P               
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 384 --------------------SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
                                VV YN++I  + +      A  L  +M ERGITPS VT+
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ F R  D+ +A +M  +++  G  P V TY  L++  C  GNM+E     + M  
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             + P  V Y ++I G C++   + +L+LL  M  KGL+P+  +Y++ I   C+  +  +
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A  L N ML     P+   Y +L  A
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINA 700



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 203/452 (44%), Gaps = 36/452 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I  H +    ++AL    + L  G +     +N LL  + K    ++    F E  
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE------------------------- 202
             ++E D   + ILI G C+ G + +A+++  Q+                          
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 203 ----------EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
                      M    +VV+Y  +IDG  +   I  A  L+ K+ E G+  +  T+  LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  + G   +  +  E ++L G+ PS+ TY  L++ YC  G + E F    EM    V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
              VTY  LI GLC++ ++ E+ +LL+ M   G+ P+ +TYN +I  FC   E  KA +L
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           +N +  +   P+ VTY VLI A    G+ K    +V  +E+R IT  + TY  +I +   
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + KA   ++ M   GF   +  Y  +I+ LC +G + EA   F  M    + P+  +
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEI 798

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
              ++  + ++GN+      L  + + G + +
Sbjct: 799 CKTVLNAFHQQGNNSSVFEFLAMVVKSGFISH 830


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 191/354 (53%), Gaps = 8/354 (2%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+G LI G C+ G    A ++L +++     PNVV+Y ++ID  CK   +  A  L+ ++
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI G F  G  KD  + + KM L  + P +YT+N L+  +C +GK+
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            EG  +F  M  + +  NVVTY +L+ G C   +V +A  + + M   G++P+  +YN +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+GFC   + D+A  LF ++      P+VVTY  LI    K+G    A  LV EM +RG+
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS--------GFSPDVYTYGVLIHGLCMK 468
            P  +TY+ ++D+  ++  ++KA  + + ++          G++ DVY Y V+I G C+K
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           G   EA  L + M +    P+   Y ++I    K+  +  A +LL EM  +GL+
Sbjct: 445 GLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 195/404 (48%), Gaps = 21/404 (5%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI-------------YTSLIDGC 220
           ++ +  ILI    + G    +F V   + + G+ PNV+              Y +LI+G 
Sbjct: 94  NLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGL 153

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G    A  L R++    +      Y  +I  + K  L  + F+ Y +M   G+SP +
Sbjct: 154 CKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDV 213

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY+ LI  +   GK+ +   LF++M    +  +V T+N L+ G CK+ +++E + +   
Sbjct: 214 VTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAM 273

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   GI PNV+TY  L+DG+C   + +KA  +FN +   G +P   +YN++I  F K   
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK 333

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +L ++M  + I P+ VTYT LID   +S  +  A ++   M   G  PD+ TY  
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEP--------NDVVYNMMIFGYCKEGNSYRALRL 512
           ++  LC    + +A  L   + +   E         +   Y +MI G+C +G    AL L
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           L +M + G +P+  +Y   I  L +  +   AE LL +M+  GL
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 170/319 (53%), Gaps = 13/319 (4%)

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT------ 317
               + +M+L G++ +L T N LI+ +   G+    F +F  +  +    NV+T      
Sbjct: 79  AISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIK 138

Query: 318 -------YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
                  Y TLI GLCK  + + A +LL ++    + PNV+ YN +ID  C     ++AF
Sbjct: 139 GLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 198

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L++++ S G SP VVTY+ LI  F   G  K A DL  +M    I P   T+ IL+D F
Sbjct: 199 DLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 258

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   M++   ++++M K G  P+V TY  L+ G C+   + +A+ +FN+M +  + P+ 
Sbjct: 259 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN+MI G+CK      A+ L  +M+ K ++PN+ +Y+S I  LC+ GK   A  L+++
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M   G+ P +  Y+ +  A
Sbjct: 379 MHDRGVPPDIITYSSILDA 397



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 182/377 (48%), Gaps = 22/377 (5%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           ++ FG ++    +    + A  +  Q+E  G + N+V    LI+   + G    +  +F 
Sbjct: 60  IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            I + G      T T LI GL                          +Y  LI+  C  G
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLK----------------------VSYGTLINGLCKVG 157

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +     +L   +  + V  NVV YNT+I  +CK   V EA  L  +M   GISP+V+TY+
Sbjct: 158 QARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYS 217

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GF   G+   A  LFN++      P V T+N+L+  F K G  K    +   M ++
Sbjct: 218 ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 277

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           GI P+ VTY  L+D +     + KA  +++ M + G +PD  +Y ++I+G C    + EA
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 337

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF  M    + PN V Y  +I G CK G    AL+L+ EM+++G+ P+I +YSS +  
Sbjct: 338 MNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDA 397

Query: 535 LCQDGKWPEAEVLLNQM 551
           LC++ +  +A  LL ++
Sbjct: 398 LCKNHQVDKAIALLTKL 414



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 43/305 (14%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
           +L D A+  F++M+   ++P   TFN                                  
Sbjct: 228 KLKD-AIDLFNKMILENIKPDVYTFN---------------------------------- 252

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL+ G C+ G + +   V   + + G  PNVV Y SL+DG C    + +A  +F  + + 
Sbjct: 253 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG 312

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+     +Y ++I G  K     +    ++KM    + P++ TY  LI   C  GK+S  
Sbjct: 313 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 372

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK--------MAGISPNVI 351
            KL DEM  R V  +++TY++++  LCK  +V +A  LL ++K        + G + +V 
Sbjct: 373 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVY 432

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  +I GFC  G  ++A  L ++++ NG+ P   TY ++I +  K   + MA  L+REM
Sbjct: 433 AYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492

Query: 412 EERGI 416
             RG+
Sbjct: 493 IARGL 497



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 51/284 (17%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V    RLL Q      +P +  + K++           A  L  Q++  G + ++VT N+
Sbjct: 44  VSSFNRLLHQ---KNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNI 100

Query: 391 LIRAFS------------------------------------------------KAGNSK 402
           LI  FS                                                K G ++
Sbjct: 101 LINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQAR 160

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+R ++ + + P+ V Y  +IDS  +   + +AF++YS M   G SPDV TY  LI
Sbjct: 161 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALI 220

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G  + G +K+A  LFN M    ++P+   +N+++ G+CK+G       +   M ++G+ 
Sbjct: 221 SGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           PN+ +Y S +   C   +  +A  + N M + G+ P    YNI+
Sbjct: 281 PNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 11/248 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           +  ++D   K     +    F  M+  G++P   T+ SL+    ++K  +     +F + 
Sbjct: 251 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN-KANSIFNTM 309

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  V  D  S+ I+I G C+   +++A  +  ++      PNVV YTSLIDG CK+G I
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNG--------LQKDGFEFYEKMQLNGVSP 278
             A  L  ++ + G+     TY+ ++  L KN         L K   + +E + + G + 
Sbjct: 370 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 429

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            +Y Y  +I  +C +G  +E   L  +M       +  TY  +I  L K+     AE+LL
Sbjct: 430 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLL 489

Query: 339 DQMKMAGI 346
            +M   G+
Sbjct: 490 REMIARGL 497



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F +FN    N     + T N +     K     + S   R + ++  TP    +  ++ S
Sbjct: 12  FLIFNFQTLNSSFQQIYTLNYI--TIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGS 69

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            V+ +    A  ++  M+  G + ++ T  +LI+     G    +  +F ++ +   +PN
Sbjct: 70  LVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPN 129

Query: 490 DVV-------------YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            +              Y  +I G CK G +  AL+LL  ++ K + PN+  Y++ I  +C
Sbjct: 130 VITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMC 189

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +     EA  L ++M+  G+ P V  Y+ L
Sbjct: 190 KVKLVNEAFDLYSEMVSEGISPDVVTYSAL 219



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 9/143 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   KS     AL    +M D GV P   T++S+L  + K+   DK     ++ +
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415

Query: 169 CKV---------ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            +V          LDVY++ ++I+G C  G  N+A  +L+++E+ G  P+   Y  +I  
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475

Query: 220 CCKNGDIERAKMLFRKIGELGLV 242
             K  + + A+ L R++   GL+
Sbjct: 476 LFKKDENDMAEKLLREMIARGLL 498


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 183/327 (55%)

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L ++   G  P+ VIYT +I G C+ G +  A  +  ++   G +    TY  L+ GL K
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
                D      +M+  GV P L T+  LIH YC EGK+ +  +LFD M ++ +  ++VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YNTLI G+C++  + +A  L D M    I PN +TY+ LID  C+ G+ + AF   +++ 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           + G  P+++TYN +I+ + ++GN       +++M    ++P  +TY  LI  +++ D M 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            AF++ ++M+K    PDV TY +LI+G  + GN++EA  +F  M    +EP+   Y  MI
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPN 524
            G+   GNS  A +L  EM ++G  P+
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 160/297 (53%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           +  +M+  G+ P    Y  +I  +C  G +S+  ++ DEM       +VVTYNTL+ GLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           KE R+ +AE LL++M+  G+ P++ T+  LI G+C  G+ DKA +LF+ + +    P +V
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN LI    + G+   A+DL  +M  R I P+ VTY+ILIDS      +E AF     M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  P++ TY  +I G C  GN+ +  K    M   K+ P+ + YN +I GY KE   
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + A +LL  M ++ + P++ +Y+  I      G   EA  +  +M   G++P    Y
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 299



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 175/327 (53%)

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            R++   GLV     YT++I G  + GL  D     ++M   G  P + TYN L++  C 
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           E ++ +   L +EMR R V  ++ T+ TLI G C E ++ +A +L D M    + P+++T
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LIDG C  G+ DKA  L++ + S    P+ VTY++LI +  + G  + A   + EM 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +GI P+ +TY  +I  + RS ++ K  +    M  +  SPD+ TY  LIHG   +  M 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A KL N M + K++P+ V YNM+I G+   GN   A  +  +M  KG+ P+  +Y S I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPS 559
                 G   EA  L ++ML+ G  P 
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 173/329 (52%), Gaps = 1/329 (0%)

Query: 163 FFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  E RC  +  D   + ++I G C AG ++ A  V +++   G  P+VV Y +L++G C
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K   +  A+ L  ++ E G+     T+T LI G    G      + ++ M    + P + 
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN LI   C +G + +   L+D+M  RE+  N VTY+ LI   C++ +V++A   LD+M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              GI PN++TYN +I G+C +G   K  +   ++  N  SP ++TYN LI  + K    
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+  ME+  + P  VTY +LI+ F    ++++A  ++  M   G  PD YTY  +
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPND 490
           I+G    GN KEA +L + M +    P+D
Sbjct: 303 INGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 124/229 (54%)

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L +M+  G+ P+ + Y  +I GFC AG    A R+ +++   G  P VVTYN L+    K
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
                 A  L+ EM ERG+ P   T+T LI  +     ++KA +++  M      PD+ T
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI G+C +G++ +A+ L++ M   ++ PN V Y+++I  +C++G    A   L EM 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            KG++PNI +Y+S I   C+ G   + +  L +M+   + P +  YN L
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 34/262 (12%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           D+AL  F  ML+  +RP   T+N+                                  LI
Sbjct: 103 DKALQLFDTMLNQRLRPDIVTYNT----------------------------------LI 128

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  GDL+KA ++ + +      PN V Y+ LID  C+ G +E A     ++   G++
Sbjct: 129 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 188

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               TY  +I G  ++G    G +F +KM +N VSP L TYN LIH Y  E K+ + FKL
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            + M   +V  +VVTYN LI G      VQEA  + ++M   GI P+  TY  +I+G   
Sbjct: 249 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 308

Query: 363 AGETDKAFRLFNQLKSNGQSPS 384
           AG + +AF+L +++   G +P 
Sbjct: 309 AGNSKEAFQLHDEMLQRGFAPD 330



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 106/195 (54%)

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++  G  P  V Y ++I  F +AG    A  +  EM   G  P  VTY  L++   +  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +  A  + + M++ G  PD+ T+  LIHG C++G + +A +LF++M   +L P+ V YN
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            +I G C++G+  +A  L  +M+ + + PN  +YS  I   C+ G+  +A   L++M+  
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 555 GLKPSVSLYNILYRA 569
           G+ P++  YN + + 
Sbjct: 186 GILPNIMTYNSIIKG 200



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 8/190 (4%)

Query: 91  HLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           H  ++FP   N VT    Y  +ID+H +    + A  +  +M++ G+ P   T+NS++  
Sbjct: 148 HSREIFP---NHVT----YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 200

Query: 151 VIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
             +S +  KG  F  +    KV  D+ ++  LI G  +   ++ AF++LN +E+    P+
Sbjct: 201 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 260

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           VV Y  LI+G   +G+++ A  +F K+   G+   ++TY  +I G    G  K+ F+ ++
Sbjct: 261 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 320

Query: 270 KMQLNGVSPS 279
           +M   G +P 
Sbjct: 321 EMLQRGFAPD 330


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 229/465 (49%), Gaps = 1/465 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-W 161
           V  +  Y  ++   +KS    +AL  +  M+  GV P   T++ L++   K    +   W
Sbjct: 282 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 341

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L        V+ +VYS+ I I+   +A   ++A+ +L ++E  G  P+V+ +T LI   C
Sbjct: 342 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 401

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G I  AK +F K+ +      + TY  L+     NG  +   E +  M+ +G + ++ 
Sbjct: 402 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVV 461

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  +I   C  G+V E  ++FDEM+ + +     +YN+LI G  K  R  +A  L   M
Sbjct: 462 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 521

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
            + G  PN  T+   I+ +  +GE+ KA + +  +KS G  P VV  N ++   +K+G  
Sbjct: 522 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 581

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            MA  +  E++  G++P  +TYT++I    ++   ++A +++  M ++   PDV     L
Sbjct: 582 GMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSL 641

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  L   G   EA ++F  + E  LEP D  YN ++ G  +EG     + LL EM     
Sbjct: 642 IDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY 701

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            PN+ +Y++ +  LC++G   +A  +L  M   G  P +S YN +
Sbjct: 702 PPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 746



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 217/462 (46%), Gaps = 1/462 (0%)

Query: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
            Y +I+D   K+   + AL   + M   G  P  +++N+++  ++K   +++ +  F + +
Sbjct: 708  YNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 767

Query: 169  CKVELDVYSFGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D  +   ++    + G + +A  ++ +   + G   +     SL++G  K   IE
Sbjct: 768  KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 827

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            ++      I   G+         LI  L K     +  E  +K +  GVS     YN LI
Sbjct: 828  KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 887

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                +E  +     LF EM+      +  TYN L+  + K MR++E  ++ ++M   G  
Sbjct: 888  CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 947

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               +TYN +I G   +   ++A  L+  L S G SP+  TY  L+    KAG  + A +L
Sbjct: 948  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 1007

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              EM E G   +   Y IL++    + + EK   ++  M   G +PD+ +Y ++I  LC 
Sbjct: 1008 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1067

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
             G + +    F  + E  LEP+ + YN++I G  K      A+ L  EM +KG+VPN+ +
Sbjct: 1068 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1127

Query: 528  YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y+S I  L + GK  EA  +  ++L  G KP+V  YN L R 
Sbjct: 1128 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 231/498 (46%), Gaps = 42/498 (8%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  ++ A  K R  +  L+   +M   GV+P   ++   +  + ++  FD+ + 
Sbjct: 317 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 376

Query: 163 FFS--ENR-CKVELDVYSFGILIKGCCEAGDLNKA------------------------- 194
             +  EN  CK   DV +  +LI+  C+AG ++ A                         
Sbjct: 377 ILAKMENEGCKP--DVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 434

Query: 195 ----------FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                      E+ N ++  G++ NVV YT++ID  C+ G +  A  +F ++ + G+V  
Sbjct: 435 FGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 494

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           Q++Y  LI G  K     D  E ++ M ++G  P+ YT+   I+ Y   G+  +  + ++
Sbjct: 495 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 554

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M+ + +  +VV  N ++ GL K  R+  A+R+  ++K  G+SP+ ITY  +I     A 
Sbjct: 555 LMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKAS 614

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A ++F  +  N   P V+  N LI    KAG    A  +  +++E  + P++ TY 
Sbjct: 615 KFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYN 674

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L+    R   +++   +   M  S + P++ TY  ++  LC  G + +A  +  SM   
Sbjct: 675 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 734

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+   YN +I+G  KE     A  +  +M +K L+P+ A+  + +    + G   EA
Sbjct: 735 GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEA 793

Query: 545 -EVLLNQMLKLGLKPSVS 561
             ++ +  L+ G K   S
Sbjct: 794 LHIIKDYFLQPGSKTDRS 811



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++G    GD+ + F+V+   +      NV  + ++  G    G +  A +    + E G
Sbjct: 224 LMRGHGRVGDMAEVFDVM---QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V   +TY  L+  L K+G  ++  E Y  M ++GV PS+ TY+ L+  +     V    
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L  EM    V  NV +Y   I  L +  R  EA R+L +M+  G  P+VIT+  LI   
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           CDAG    A  +F ++K + Q P  VTY  L+  F   G+S+   ++   M+  G   + 
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V YT +ID+  +   + +A EM+  M++ G  P+ Y+Y  LI G        +A +LF  
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M     +PN   + + I  Y K G S +A++    M  KG+VP++ + ++ +  L + G+
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              A+ + +++  +G+ P    Y ++ +
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIK 608



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 4/417 (0%)

Query: 111  SIIDAHLKSRLSDQALFYFHQ-MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--N 167
            +I+ + +K  L  +AL       L  G +   ++ +SL+  ++K    +K  + F+E   
Sbjct: 779  TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKS-IEFAEIIA 837

Query: 168  RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               + LD +    LIK  C+     +A E++ + +  G S    +Y SLI G      I+
Sbjct: 838  SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 897

Query: 228  RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             A+ LF ++ ELG    + TY +L+  + K+   ++  +  E+M   G   +  TYN +I
Sbjct: 898  IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 957

Query: 288  HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                   ++ +   L+  +  +  +    TY  L+ GL K  R+++AE L ++M   G  
Sbjct: 958  SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 1017

Query: 348  PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             N   YN L++G   AG T+K   LF  +   G +P + +Y ++I    KAG        
Sbjct: 1018 ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTY 1077

Query: 408  VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             R++ E G+ P  +TY +LID   +S  +E+A  +++ MQK G  P++YTY  LI  L  
Sbjct: 1078 FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1137

Query: 468  KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
             G   EA K++  +     +PN   YN +I GY   G++  A    G M   G +PN
Sbjct: 1138 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 225/510 (44%), Gaps = 43/510 (8%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR----SNTFNSLLIFVI 152
           P +  P  + R  E +I A   +    +AL  F     +  +PR    + + N +L  + 
Sbjct: 170 PRAPPPCDERRAAEDVIHALRSADGPAEALERFRS---AARKPRVAQTTASCNYMLELMR 226

Query: 153 KSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
                 D   +F    R  V+ +V +F  +  G    G L  A   L  ++E G   N  
Sbjct: 227 GHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 286

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y  L+    K+G    A  ++R +   G+V +  TY+VL+    K    +       +M
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 346

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           + +GV P++Y+Y   I       +  E +++  +M +     +V+T+  LI  LC   R+
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 406

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            +A+ +  +MK +   P+ +TY  L+D F D G++     ++N +K++G + +VV Y  +
Sbjct: 407 SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAV 466

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM--------- 442
           I A  + G    A ++  EM+++GI P + +Y  LI  F+++D    A E+         
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526

Query: 443 --------------------------YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
                                     Y LM+  G  PDV     ++ GL   G +  A +
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F+ +    + P+ + Y MMI    K      A+++  +M E   VP++ + +S I  L 
Sbjct: 587 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 646

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + G+  EA  +  Q+ ++ L+P+   YN L
Sbjct: 647 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 676



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 1/301 (0%)

Query: 105  KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
            K+ LY S+I   +   L D A   F +M + G  P   T+N LL  + KS   ++     
Sbjct: 879  KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 938

Query: 165  SE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             E +R   E    ++  +I G  ++  L +A ++   L   GFSP    Y  L+DG  K 
Sbjct: 939  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 998

Query: 224  GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            G IE A+ LF ++ E G  A    Y +L+ G    G  +     ++ M   G++P + +Y
Sbjct: 999  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1058

Query: 284  NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
              +I   C  G++++G   F ++    +  +++TYN LI GL K  R++EA  L ++M+ 
Sbjct: 1059 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1118

Query: 344  AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             GI PN+ TYN LI     AG+  +A +++ +L + G  P+V TYN LIR +S +G++  
Sbjct: 1119 KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1178

Query: 404  A 404
            A
Sbjct: 1179 A 1179


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 229/459 (49%), Gaps = 3/459 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           +++  +A+  F+Q+     +P +  +NS++I ++    ++K    ++E  N      D  
Sbjct: 168 AKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTV 227

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C+ G  + A  +LN++++ G  P   IYT LI    K  ++  A  LF ++
Sbjct: 228 TYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEM 287

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                     TYT LI GL K G   + + F+ +M+  G  P     N +I+     G++
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRL 347

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
            +  KLF+EM   +   +VVTYNT+I  L + + R+ E     ++MK +GISP+  TY+ 
Sbjct: 348 DDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSI 407

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGFC    T+KA  L  ++   G  P    Y  LI A  KA    +A +L +E++E  
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENC 467

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            + S   Y ++I    ++  ++ A  ++  M K G +P+VY Y  L+ GL   G + EA 
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                M E    P+   YN+++ G  K G  +RA+ +L  M +  + P+  SY++ +G +
Sbjct: 528 TTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAM 587

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              G + EA  L+ +M  LG +  +  Y+ +  A   ++
Sbjct: 588 SHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVD 626



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 222/466 (47%), Gaps = 17/466 (3%)

Query: 43  TPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRS-LLCH------LTQL 95
           TP  +S I+R+L       S A A    +K+   + T+ ++     +L H      + +L
Sbjct: 154 TPMELSDIIRML-GNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHEL 212

Query: 96  FPSSSN-----PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           +   SN     P T +  Y ++I A  K    D A+   ++M D+G++P +  +  L+  
Sbjct: 213 YNEMSNEGHCFPDTVT--YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIAL 270

Query: 151 VIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
             K  +       F E R +    DV+++  LI+G  +AG  ++A+   +++   G  P+
Sbjct: 271 FFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD 330

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ-KDGFEFY 268
            V+  ++I+   K G ++ A  LF ++G L  + +  TY  +I  LF++  +  +   ++
Sbjct: 331 TVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWF 390

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           E+M+ +G+SPS +TY+ LI  +C   +  +   L +EM  +        Y +LI  L K 
Sbjct: 391 ERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R   A  L  ++K    S +   Y  +I     AG  D A  LF+++   G +P+V  Y
Sbjct: 451 KRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAY 510

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N L+   ++AG    A   +R M+E G  P   +Y I+++   ++    +A EM S M++
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 570

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           S   PD  +Y  ++  +   G  +EA+KL   M     E + + Y+
Sbjct: 571 SAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYS 616



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 6/330 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I    K+   D+A  +FH+M   G RP +   N+++ F+ K+   D     F E  
Sbjct: 299 YTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMG 358

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM---GFSPNVVIYTSLIDGCCKNG 224
             +    V ++  +IK   E+   ++  E+ +  E M   G SP+   Y+ LIDG CK  
Sbjct: 359 TLQCIPSVVTYNTIIKALFESK--SRISEISSWFERMKGSGISPSPFTYSILIDGFCKTN 416

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             E+A ML  ++ E G       Y  LI  L K        E +++++ N  S S   Y 
Sbjct: 417 RTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYA 476

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I      G++ +   LFDEM       NV  YN L+ GL +   + EA   + +M+  
Sbjct: 477 VMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEH 536

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++ +YN +++G    G   +A  + + +K +   P  V+YN ++ A S AG  + A
Sbjct: 537 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEA 596

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSD 434
           + L++EM   G     +TY+ ++++  + D
Sbjct: 597 AKLMKEMNVLGFEYDLITYSSILEAIGKVD 626


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 233/461 (50%), Gaps = 16/461 (3%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGI 180
           S QAL +F  M+ S +     +FN LL  + K   + + + L+   +   +  + ++  I
Sbjct: 77  STQALQFFDLMMRSII-----SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNI 131

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI   C    + +    +  +   G+ P+VV YTSLI G C    I  A  LF ++ +LG
Sbjct: 132 LINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG 191

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP-------SLYTYNCLIHEYCNE 293
                 TY  LI GL + G      + +++M LNG SP       ++++YN +I E C  
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINLALKLHQEM-LNGTSPYAINCKPNIFSYNIIIDELCKI 250

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK  E  +LF+EM  + V  +VVT++ LI  LCKE  V EA++ L+ M + GI P++ T+
Sbjct: 251 GKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTF 310

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI+GFC  G+ D A  LF  + S G  P V++Y VLI  + K  N + A  L  EM  
Sbjct: 311 TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLR 370

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P   T+ +L+     +  +  A +++ +++      ++Y   V + GLC  G + E
Sbjct: 371 VGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFE 430

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +LFN +    ++ +   +N +I G CK      A  L  +++++GL P++ +Y   I 
Sbjct: 431 AMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMIN 490

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA--KNN 572
             C++G+   A +L   M + G  P++  Y+ L     KNN
Sbjct: 491 GFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNN 531



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 189/376 (50%), Gaps = 6/376 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAF----EVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIE 227
           +V ++G LIKG C  G++N A     E+LN       +  PN+  Y  +ID  CK G  +
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK LF ++ + G+     T++ LI  L K G+  +  +F E M L G+ P L+T+  LI
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G +    +LF  M  +    +V++Y  LI G CK   V+EA +L ++M   G  
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ T+  L+ G   AG+   A +LF  +K +    ++   +V +    K G    A +L
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E++   +     ++  LID   ++  +E A+E++  + + G  PDV TY ++I+G C 
Sbjct: 435 FNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK 494

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +  A+ LF  M E    PN + Y+ ++ G+ K       ++LL +M +K +    + 
Sbjct: 495 NGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASI 554

Query: 528 YSSTIGVLCQDGKWPE 543
           Y+    ++ +D K  E
Sbjct: 555 YTIVEDMVSKDEKCRE 570



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  IID   K     +A   F++M+D GVRP                             
Sbjct: 240 YNIIIDELCKIGKWKEAKRLFNEMVDQGVRP----------------------------- 270

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DV +F  LI   C+ G + +A + L  +   G  P++  +TSLI+G C  GD++ 
Sbjct: 271 -----DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDS 325

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           AK LF  +   G      +YTVLI G  K    ++  + Y +M   G  P + T+  L+ 
Sbjct: 326 AKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLK 385

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                GKV +  KLF  ++   V  N+   +  + GLCK   + EA  L +++K   +  
Sbjct: 386 GLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKL 445

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ ++N LIDG C A + + A+ LF +L   G  P VVTY ++I  F K G    A+ L 
Sbjct: 446 DIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILF 505

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFE-MYSLMQKS-GFSPDVYT 457
           + MEE G TP+ +TY+ L+  F +++ +E+  + ++ ++QK    +  +YT
Sbjct: 506 QMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 3/234 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           Y  +I  + K+   ++A+  +++ML  G  P   TF  LL  +F+      D   LF   
Sbjct: 345 YTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVG-DAKKLFGVV 403

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               V  ++Y   + + G C+ G L +A E+ N+L+      ++  +  LIDG CK   +
Sbjct: 404 KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKL 463

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A  LF K+ + GL     TY ++I G  KNG   +    ++ M+ NG +P+L TY+ L
Sbjct: 464 ETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSAL 523

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +H +    K+ E  KL  +M  ++V+     Y  +   + K+ + +E   +L +
Sbjct: 524 LHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQR 577


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 223/458 (48%), Gaps = 23/458 (5%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP   +  +  I+ + +KS+     L    QM   G+ P   TFN L+     +C    G
Sbjct: 63  NPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI-----NCFCQLG 117

Query: 161 WLFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            + F+ +      +   E D+ +    IKG C  G +++A    ++L  +GF  + V Y 
Sbjct: 118 LIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYG 177

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +LI+G CK G+   A  L R++    +      Y  +I G+ K+    D F+ Y +M   
Sbjct: 178 TLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK 237

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
            +SP + TY+ LI  +   GK+ +   LF++M    +  +V T+N L+ G CKE R+++A
Sbjct: 238 RISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKA 297

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + +LD M +  I PNV T+N L+DGFC   +  +   +F  +   G  P+VVTY  L+  
Sbjct: 298 KNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 357

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           +        A  +   M +RG+T +  +Y I+I+ F +   ++KA +++  M      PD
Sbjct: 358 YCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPD 417

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  LI GLC  G +  A +L N M +    PN + YN ++              LL 
Sbjct: 418 VVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLT 465

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           ++ ++G+ PN+ + +  I  LCQ GK   A  +   +L
Sbjct: 466 KLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 196/393 (49%), Gaps = 35/393 (8%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           +F ILI   C+ G +  AF VL ++ +MG+ P+++   + I G C  G I +A     K+
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             LG    Q +Y  LI     NGL                              C  G+ 
Sbjct: 165 VALGFHLDQVSYGTLI-----NGL------------------------------CKVGET 189

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
               +L   +  + V  N V YNT+I G+ K+  V +A  L  +M    ISP+V+TY+ L
Sbjct: 190 RAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSAL 249

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GF   G+   A  LFN++      P V T+N+L+  F K G  K A +++  M  + I
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI 309

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+  T+  L+D F +   M++   ++++M K G  P+V TY  L+ G C+   + +A K
Sbjct: 310 KPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKK 369

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +FN+M +  +  N   YN+MI G+CK     +A++L  EM+ K ++P++ +Y+S I  LC
Sbjct: 370 IFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLC 429

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + GK   A  L+N+M   G  P++  YN +  A
Sbjct: 430 KSGKISYAFQLVNEMHDRGQPPNIITYNSILNA 462


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 221/439 (50%), Gaps = 1/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F  ++  G +P   TF+ +++ F  K C      L     +   E + +++ I+I  CC 
Sbjct: 44  FKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCI 103

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G  + A    N + E G +P VV + ++I+  CK G++  A+ LF  + E+G       
Sbjct: 104 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 163

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ G  K          YE+M+  G++P   T+N L+  +   G+  +G +L  ++ 
Sbjct: 164 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  +   ++  + GLC   R+ EA   L  M   G+SP++I +N +I  +  AG  D
Sbjct: 224 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 283

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF  +  +   G +PS  T + L+   S  G  + A++L+ +M E+G++ + + +T+L+
Sbjct: 284 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 343

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D F +  D+  A  ++  M++ G  PDV  +   I GL  +G ++EA  +F  M    L 
Sbjct: 344 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN +I G+CK G    AL+L   M  +GL+P+I + +  IG LC+ G+   A  +
Sbjct: 404 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 463

Query: 548 LNQMLKLGLKPSVSLYNIL 566
              M + GL P +  YN L
Sbjct: 464 FMDMHQTGLSPDIITYNTL 482



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 235/504 (46%), Gaps = 75/504 (14%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAH-LKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           L HL   F    N       Y  +I+A  ++ R SD AL +F+ M++ G  P   TFN++
Sbjct: 78  LLHLMPKFHCEPNAFA----YNIVINACCIRGRTSD-ALAWFNLMIERGCNPTVVTFNTV 132

Query: 148 LIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
                                             I   C+ G++ +A ++ + L+EMGFS
Sbjct: 133 ----------------------------------INAFCKEGNVVEARKLFDGLKEMGFS 158

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG--- 264
           PN ++Y +L++G  K  +I++A ML+ ++ + G+     T+ +L+ G +K G ++DG   
Sbjct: 159 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRL 218

Query: 265 --------------------------------FEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
                                            EF   M   G+SPS+  +N +I  Y  
Sbjct: 219 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 278

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G   + F+ +  M H  +  +  T ++L+ GL    R+QEA  L+ QM   G+S N + 
Sbjct: 279 AGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA 338

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           +  L+D F   G+   A  L+ +++  G  P VV ++  I   SK G  + A ++  EM 
Sbjct: 339 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 398

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +G+ P+   Y  LI  F +   + +A ++  +M+  G  PD++T  ++I GLC +G M+
Sbjct: 399 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 458

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A  +F  M +T L P+ + YN +I GYCK  +   A  L+  M   G  P++ +Y+  I
Sbjct: 459 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGL 556
              C   +   A ++L++++  G+
Sbjct: 519 HGFCSSRRMNRAVLMLDELVSAGI 542



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 46/449 (10%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE------NRCKVELDVYS 177
           QAL    +M + GVRP ++    L   +++   +   W  F +        CK     Y+
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCK-----YT 58

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  +I G C  G ++    +L+ + +    PN   Y  +I+ CC  G             
Sbjct: 59  FSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGR------------ 106

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
                                    D   ++  M   G +P++ T+N +I+ +C EG V 
Sbjct: 107 -----------------------TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVV 143

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E  KLFD ++    + N + YNTL+ G  K   + +A  L ++M+  GI+P+ IT+N L+
Sbjct: 144 EARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILV 203

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G    G  +   RL   +   G  P    +++ +     AG    A + + +M E+G++
Sbjct: 204 SGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 263

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS + +  +I ++ ++   +KAFE Y LM   G +P   T   L+ GL + G ++EA++L
Sbjct: 264 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 323

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
              M E  L  N++ + +++  + K G+   A  L GEM  +G+ P++ ++S+ I  L +
Sbjct: 324 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSK 383

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G   EA  +  +ML+ GL P+   YN L
Sbjct: 384 QGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%)

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A E+   M++ G  P      +L   L   G+     KLF  +     +P    ++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G+C++G  +    LL  M +    PN  +Y+  I   C  G+  +A    N M++ G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 558 PSVSLYNILYRA 569
           P+V  +N +  A
Sbjct: 124 PTVVTFNTVINA 135



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/171 (19%), Positives = 69/171 (40%), Gaps = 36/171 (21%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------- 161
           + + ID   K  L ++A   F +ML  G+ P +  +NSL+    K    ++         
Sbjct: 374 FSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMR 433

Query: 162 -----------------------------LFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
                                        +F   ++  +  D+ ++  LI G C+A D+ 
Sbjct: 434 HRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMV 493

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
            A  ++N++   G +P++  Y   I G C +  + RA ++  ++   G+++
Sbjct: 494 NADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILS 544


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 262/594 (44%), Gaps = 76/594 (12%)

Query: 40  LQHTPQSISII-LRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLC-------- 90
           L H P + SI+ L   LS  + HS A A +L  +++   + +    P +L+         
Sbjct: 45  LLHRPTTSSIVDLNRALSDAARHSPAVAISLFRRMV---MVARPKVPPNLITYSVVIDCC 101

Query: 91  ----HLTQLFPS---------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGV 137
               HL   F +         ++  +T S L +++ D   K R S+       +M   G 
Sbjct: 102 SRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCD---KKRTSEAMDIALRRMPVLGC 158

Query: 138 RPRSNTFNSLLIFVIKSCSFDKG---------WLFFSENRCKVELDVYSFGILIKGCCEA 188
            P  N F S  I +   C  ++           +   + R     DV S+  +I G    
Sbjct: 159 TP--NVF-SYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLRE 215

Query: 189 G-DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           G  L+ A+ + +Q+ + G SP+VV Y S+I    K   +++A ++  ++ + G +  + T
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +  L+ G   +G   D    +++M  +GV P ++TYN L+   C  G+  E  K+FD M 
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335

Query: 308 HREVACNVVTYNTLICGLC-----------------------------------KEMRVQ 332
            R    N  TY TL+ G                                     K  +V 
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           +A  L  +M+  G++P+ +TY  ++D  C  G+ D A   F +L S G +P  V +  LI
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI 455

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
                      A +L  EM  RGI P+ + +  L++   +   + +A  ++ LM +    
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            DV TY  LI G C+ G + EA+KL   M    ++PN+V YN MI GYCK G    A  L
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +M  KG+ P I +YS+ +  L Q  +   A+ L   M+K G+K  +  YNI+
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII 629



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 213/432 (49%), Gaps = 1/432 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           + S++  +  S   + A+  F +M   GV P   T+N+L+ ++ K+  S +   +F S  
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +   + +  ++G L+ G    G L K   +L+ +   G  P+  I+  LI    K+G ++
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A +LF K+   GL     TY +++  L   G   D    + ++   G++P    +  LI
Sbjct: 396 DAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI 455

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H  C   K  +  +L  EM  R +  N + +NTL+  LCKE  V  A+ + D M    + 
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +VITYN LIDG+C  G+ D+A +L   +  +G  P+ VTYN +I  + K G  + A  L
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R+M  +G+ P  VTY+ ++    ++     A E+Y  M KSG   D+ TY +++ GLC 
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ 635

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                +A ++F +++       +  +N+MI    K G    A  L   +  +GLVPN+ +
Sbjct: 636 NNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVT 695

Query: 528 YSSTIGVLCQDG 539
           Y   +  L + G
Sbjct: 696 YWLMMKSLIEQG 707



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 213/444 (47%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSEN 167
           Y +++    K+  S +A   F  M+  G +P S T+ +LL       S  K   L     
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV 370

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ D Y F ILI    + G ++ A  + +++   G +P+ V Y  ++D  C  G ++
Sbjct: 371 RNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVD 430

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F ++   GL      +  LI GL          E   +M   G+ P+   +N L+
Sbjct: 431 DAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLL 490

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C EG V+    +FD M   +V  +V+TYNTLI G C   +V EA +LL+ M + G+ 
Sbjct: 491 NHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVK 550

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN +TYN +I+G+C  G  + AF LF Q+ S G +P +VTY+ +++   +A  +  A +L
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M + GI     TY I++    +++  + A  ++  +    F  +  T+ ++I  L  
Sbjct: 611 YLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLK 670

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   EA  LF S+    L PN V Y +M+    ++G       L   + + G   N   
Sbjct: 671 GGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRM 730

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
            ++ +G L Q G+  +A V L+++
Sbjct: 731 LNALVGKLLQKGEVRKAGVYLSKI 754



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 220/498 (44%), Gaps = 37/498 (7%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++I+  L+  R  D A   F QMLD G+ P   T+NS++  + K+ + DK  +     
Sbjct: 205 YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRM 264

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +     +  +   L+ G C +G  N A  V  ++   G  P+V  Y +L+   CKNG  
Sbjct: 265 VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +F  + + G      TY  L+ G    G         + M  NG+ P  Y +N L
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN--------------------------- 319
           I  Y   GKV +   LF +MR + +  + VTY                            
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL 444

Query: 320 --------TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                    LI GLC   +  +AE L  +M   GI PN I +N L++  C  G   +A  
Sbjct: 445 TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           +F+ +        V+TYN LI  +   G    A+ L+  M   G+ P+EVTY  +I+ + 
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++  +E AF ++  M   G +P + TY  ++ GL        A +L+  M ++ ++ +  
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            YN+++ G C+   +  ALR+   +          +++  I  L + G+  EA+ L   +
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASL 684

Query: 552 LKLGLKPSVSLYNILYRA 569
           L  GL P+V  Y ++ ++
Sbjct: 685 LARGLVPNVVTYWLMMKS 702



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 172/416 (41%), Gaps = 75/416 (18%)

Query: 122 SDQALFYFHQMLD----SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           ++ +L   H +LD    +G++P    FN L+    K    D   L FS+ R + +  D  
Sbjct: 355 TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV 414

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC--------------- 221
           ++GI++   C  G ++ A     +L   G +P+ V++ +LI G C               
Sbjct: 415 TYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474

Query: 222 --------------------KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
                               K G + RAK +F  +  + +     TY  LI G   +G  
Sbjct: 475 IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +  +  E M L+GV P+  TYN +I+ YC  G++ + F LF +M  + V   +VTY+T+
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTI 594

Query: 322 I-----------------------------------CGLCKEMRVQEAERLLDQMKMAGI 346
           +                                    GLC+     +A R+   + +   
Sbjct: 595 LQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDF 654

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
                T+N +ID     G  D+A  LF  L + G  P+VVTY +++++  + G  +   D
Sbjct: 655 HLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDD 714

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           L   +E+ G T +      L+   ++  ++ KA    S + ++ FS +  T   L+
Sbjct: 715 LFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 46/309 (14%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG---ISPNVITYNKLIDG 359
           FDE+ HR    ++V  N  +    +      A  L  +M M     + PN+ITY+ +ID 
Sbjct: 42  FDELLHRPTTSSIVDLNRALSDAARH-SPAVAISLFRRMVMVARPKVPPNLITYSVVIDC 100

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL-VREMEERGITP 418
               G  D AF    ++  +G +   +T++ L++A      +  A D+ +R M   G TP
Sbjct: 101 CSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTP 160

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLM-----QKSGFSPDVYTYGVLIHGLCMKG-NMK 472
           +  +YTIL+      +  ++A  +   M      + G+ PDV +Y  +I+GL  +G  + 
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220

Query: 473 EASKLFNSMWETKLEPNDVVYNMMI----------------------------------- 497
            A  LF+ M +  L P+ V YN +I                                   
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GYC  G    A+ +   M   G+ P++ +Y++ +G LC++G+  EA  + + M+K G K
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340

Query: 558 PSVSLYNIL 566
           P+ + Y  L
Sbjct: 341 PNSATYGTL 349



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 15/217 (6%)

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG--NSKMASDLVREM---EERGITPS 419
           ++  A   F++L     + S+V  N   RA S A   +  +A  L R M       + P+
Sbjct: 34  DSHHAHHAFDELLHRPTTSSIVDLN---RALSDAARHSPAVAISLFRRMVMVARPKVPPN 90

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL-F 478
            +TY+++ID   R   ++ AF     + +SG++ +  T+  L+  LC K    EA  +  
Sbjct: 91  LITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIAL 150

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-----NEKGLVPNIASYSSTIG 533
             M      PN   Y +++ G C E  S +AL LL  M        G  P++ SY++ I 
Sbjct: 151 RRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVIN 210

Query: 534 VLCQDGKWPE-AEVLLNQMLKLGLKPSVSLYNILYRA 569
            L ++G+  + A  L +QML  GL P V  YN +  A
Sbjct: 211 GLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISA 247


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 225/466 (48%), Gaps = 6/466 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SII A  K +  D+A+     M+ +GV P   T+ S++     S    +   F  + R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293

Query: 169 CK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                   +E D+ ++  L++G    G L     +L+ +   G  P+  +Y  LI    K
Sbjct: 294 SDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAK 353

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G ++ A ++F K+ + GL     TY  +I  L K+G  +D   ++E+M   G+SP    
Sbjct: 354 QGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 413

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LIH  C   K     +L  EM  R +  N + +N++I   CKE RV E+E+L D M 
Sbjct: 414 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 473

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P++ITY+ LIDG+C AG+ D+A +L + + S G  P+ VTY  LI  + K     
Sbjct: 474 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG 533

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L +EME  G++P  +TY I++    ++     A E+Y  + +SG   ++ TY +++
Sbjct: 534 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HGLC      +A ++F ++    L+     +N+MI    K G +  A  L    +  GLV
Sbjct: 594 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLV 653

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           PN  +Y      +   G   E + L   M   G      + N + R
Sbjct: 654 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 699



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 209/406 (51%), Gaps = 9/406 (2%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++ ILI  CC A  L+  F  L  + + GF    + +T L+ G C +     A
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM---QLNGVSPSLYTYNC 285
             ++ R++ EL  +    + T+L+ GL      ++  E    M   +  G +P + +Y  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I+ +  EG   + +  + EM  R ++ +VVTY+++I  LCK   + +A  +L  M   G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-----SPSVVTYNVLIRAFSKAGN 400
           + PN  TY  ++ G+C +G+  +A     +++S+G       P + TY  L++ ++  G 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
                 L+  M   GI P    Y ILI ++ +   +++A  ++S M++ G +PD  TYG 
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I  LC  G +++A   F  M +  L P ++VYN +I G C      RA  L+ EM ++G
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  N   ++S I   C++G+  E+E L + M+++G+KP +  Y+ L
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 213/458 (46%), Gaps = 11/458 (2%)

Query: 122 SDQALFYFHQMLDS---GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           S +AL   H M D    G  P   ++ +++    K     K +  + E  +R ++  DV 
Sbjct: 174 SQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDR-RISPDVV 232

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I   C+   ++KA EVL  + + G  PN   YTS++ G C +G  + A    +K+
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292

Query: 237 GELG-----LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
              G     L     TY  L+ G    G         + M  NG+ P  Y YN LI  Y 
Sbjct: 293 RSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYA 352

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +GKV E   +F +MR + +  + VTY  +I  LCK  RV++A    +QM   G+SP  I
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            YN LI G C   + ++A  L  ++   G   + + +N +I +  K G    +  L   M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
              G+ P  +TY+ LID +  +  M++A ++ S M   G  P+  TY  LI+G C    M
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A  LF  M  + + P+ + YN+++ G  +   +  A  L   + E G    +++Y+  
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  LC++    +A  +   +  + LK     +NI+  A
Sbjct: 593 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 630



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 2/380 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    KS   + A+ YF QM+D G+ P +  +NSL+  +     +++      E  
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 438

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + + L+   F  +I   C+ G + ++ ++ + +  +G  P+++ Y++LIDG C  G ++
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +GL     TY  LI G  K     D    +++M+ +GVSP + TYN ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                  + +   +L+  +        + TYN ++ GLCK     +A R+   + +  + 
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +ID     G   +A  LF    SNG  P+  TY ++       G  +    L
Sbjct: 619 LEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 678

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              ME+ G T        ++   ++  ++ +A    S++ +  FS +  T  + I  L  
Sbjct: 679 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 737

Query: 468 KGNMKEASKLFNSMWETKLE 487
            G  +E  +     +++ +E
Sbjct: 738 GGKYQEYHRFLPEKYKSFIE 757


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 234/486 (48%), Gaps = 27/486 (5%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           + S+   + +D H        A+  F++ML     P    FN +L  ++KS + +     
Sbjct: 16  SHSKFNSNHVDVH-------DAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAI 68

Query: 164 FSENRCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
              +R +   +   + +F  +I   C  G+++ AF VL ++ +MG+ P+ +  T+LI G 
Sbjct: 69  SLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGL 128

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C NG +  A      +   G    + +Y +LI GL K G  +   +   K+    V+ ++
Sbjct: 129 CLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNV 188

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             Y+ +I   C E  V+E ++L+ +M  ++V+ +VVT++ LI G C   + +EA  L  +
Sbjct: 189 VMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHE 248

Query: 341 MKMAGISPNVITYNKLIDGFCDAGET-----------------DKAFRLFNQLKSNGQSP 383
           M +  I+P+V T+N L+D  C  G T                 +KA  +FN +     +P
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTP 308

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            V +Y ++I+   K      A  L  EM  +GITP +VTY+ LID   +S+ +  A+E+ 
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELL 368

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G   DV TY   +H LC    + +A  L   + +  ++PN   YN++I G CKE
Sbjct: 369 DQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKE 428

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A  +  ++  KG    + +Y+  I  LC +G + EA  LL +M   G  P V  Y
Sbjct: 429 GRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTY 488

Query: 564 NILYRA 569
             + RA
Sbjct: 489 ETIIRA 494



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 222/455 (48%), Gaps = 28/455 (6%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSF 178
           A+  +H++  + + P   TFN+++     +C    G + F+ +      +     D  + 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVI-----NCYCHLGEMDFAFSVLAKILKMGYHPDTITL 121

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             LIKG C  G +++A    + +   GF  N V Y  LI+G CK G+   A  + RKI  
Sbjct: 122 TTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDG 181

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
             +      Y+ +I  L K  L  + +E Y +M +  VSP + T++ LI+ +C  G+  E
Sbjct: 182 KLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKE 241

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL-------DQMKMAG------ 345
            F LF EM    +  +V T+N L+  LCKE   +E + +L       +Q+  A       
Sbjct: 242 AFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNII 301

Query: 346 ----ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               ++P+V +Y  +I   C     D+A  LFN+++  G +P  VTY+ LI    K+   
Sbjct: 302 GKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERI 361

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A +L+ +M  RG     +TYT  + +  ++  ++KA  +   ++  G  P++ TY +L
Sbjct: 362 SHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNIL 421

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I GLC +G  + A  +F  +     +     YN+MI G C EG    A+ LL +M + G 
Sbjct: 422 IDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGC 481

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
            P++ +Y + I  L ++ +  +AE LL +M+  GL
Sbjct: 482 TPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 218/441 (49%), Gaps = 19/441 (4%)

Query: 101 NPVTKSRL-YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           N +T S + + ++I+ +      D A     ++L  G  P + T  +L+  +  +    +
Sbjct: 77  NAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHE 136

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
              F      +   L+  S+GILI G C+ G+   A +VL +++    + NVV+Y+++ID
Sbjct: 137 ALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIID 196

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             CK   +  A  L+ ++    +     T++ LI G    G  K+ F  + +M L  ++P
Sbjct: 197 SLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINP 256

Query: 279 SLYTYNCLIHEYCNEG-----------------KVSEGFKLFDEMRHREVACNVVTYNTL 321
            + T+N L+   C EG                 +V++   +F+ +  R V  +V +Y  +
Sbjct: 257 DVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTII 316

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I  LCK   V EA  L ++M+  GI+P+ +TY+ LIDG C +     A+ L +Q+ + GQ
Sbjct: 317 IKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQ 376

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              V+TY   + A  K      A  LV++++++GI P+  TY ILID   +    E A  
Sbjct: 377 PADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQV 436

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           ++  +   G+   V+TY ++I+GLC++G   EA  L   M +    P+ V Y  +I    
Sbjct: 437 IFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALF 496

Query: 502 KEGNSYRALRLLGEMNEKGLV 522
           K   +++A +LL EM  +GL+
Sbjct: 497 KNDENHKAEKLLREMIARGLL 517



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 18/336 (5%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           T   +Y +IID+  K +L  +A   + QM+   V P   TF++L+        F + +  
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGL 245

Query: 164 FSEN-RCKVELDVYSFGILIKGCCEAG-----------------DLNKAFEVLNQLEEMG 205
           F E     +  DV +F IL+   C+ G                  +NKA  V N + +  
Sbjct: 246 FHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRR 305

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
            +P+V  YT +I   CK   ++ A  LF ++   G+   + TY+ LI GL K+      +
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E  ++M   G    + TY   +H  C   +V +   L  +++ + +  N+ TYN LI GL
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           CKE R + A+ +   + + G    V TYN +I+G C  G  D+A  L  +++ NG +P V
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDV 485

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           VTY  +IRA  K   +  A  L+REM  RG+   +V
Sbjct: 486 VTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 222/438 (50%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+    +++D G +P   T+N L+  + K+  F +  ++  +   + +E D +++  L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G +  A  +L      GF P+   Y SLIDG C  G+  RA  LF +    G+
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 Y  LI GL   GL  +  +   +M   G+ P + T+N L++  C  G VS+   
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L   M  +    ++ T+N LI G   +++++ A  +LD M   G+ P+V TYN L++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              + +     +  +   G +P++ T+N+L+ +  +      A  L+ EM+ + + P  V
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAV 567

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGF-SPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           T+  LID F ++ D++ A+ ++  M++    S    TY ++IH    K N+  A KLF  
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQE 627

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L P+   Y +M+ G+CK GN     + L EM E G +P++ +    I  LC + +
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA  ++++M++ GL P
Sbjct: 688 VYEAAGIIHRMVQKGLVP 705



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 216/479 (45%), Gaps = 36/479 (7%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
           +A+  F +M      P   ++N+++  ++ S  FD+    +   R + +  DVYSF I +
Sbjct: 94  EAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG----------------------- 219
           K  C     + A  +LN +   G   NVV Y +++ G                       
Sbjct: 154 KSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVS 213

Query: 220 ------------CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
                        CK GD++  + L  K+ + G++    TY   I GL + G        
Sbjct: 214 LCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRM 273

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
             ++   G  P + TYN LI+  C   K  E      ++ +  +  +  TYNTLI G CK
Sbjct: 274 VGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCK 333

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              VQ AER+L      G  P+  TY  LIDG C  GET++A  LFN+    G  P+V+ 
Sbjct: 334 GGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           YN LI+  S  G    A+ L  EM E+G+ P   T+ IL++   +   +  A  +  +M 
Sbjct: 394 YNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G+ PD++T+ +LIHG   +  M+ A ++ + M +  ++P+   YN ++ G CK     
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYE 513

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +     M EKG  PN+ +++  +  LC+  K  +A  LL +M    + P    +  L
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 205/426 (48%), Gaps = 49/426 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    K+    +A  Y  ++++ G+ P S T+N+L+        + KG +     R
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI------AGYCKGGMVQLAER 342

Query: 169 CKVEL-------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             V         D +++  LI G C  G+ N+A  + N+    G  PNV++Y +LI G  
Sbjct: 343 ILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG----------------- 264
             G I  A  L  ++ E GL+    T+ +L+ GL K G   D                  
Sbjct: 403 NQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462

Query: 265 ------------------FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
                              E  + M  NGV P +YTYN L++  C   K  +  + +  M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +  A N+ T+N L+  LC+  ++ +A  LL++MK   ++P+ +T+  LIDGFC  G+ 
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582

Query: 367 DKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           D A+ LF +++     S S  TYN++I AF++  N  MA  L +EM +R + P   TY +
Sbjct: 583 DGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++D F ++ +++  ++    M ++GF P + T G +I+ LC++  + EA+ + + M +  
Sbjct: 643 MVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702

Query: 486 LEPNDV 491
           L P  V
Sbjct: 703 LVPEAV 708



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 189/391 (48%), Gaps = 3/391 (0%)

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGF---SPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           G+ +      G   K  E +N  E M F    P V  Y +++     +G  ++A  ++ +
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + + G+    +++T+ +    +             M   G   ++  Y  ++  +  E  
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
             EG++LF +M    V+  + T+N L+  LCK+  V+E E+LLD++   G+ PN+ TYN 
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
            I G C  GE D A R+  +L   G  P VVTYN LI    K    + A   + ++   G
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P   TY  LI  + +   ++ A  +      +GF PD +TY  LI GLC +G    A 
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRAL 376

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LFN      ++PN ++YN +I G   +G    A +L  EM+EKGL+P + +++  +  L
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ G   +A+ L+  M+  G  P +  +NIL
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 2/385 (0%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQHT 247
           D  KA E+ N + +E GF   +  Y S+I+     G  E  + +   + + +G    +  
Sbjct: 19  DPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGV 78

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y   +    + G  ++    +E+M      P++++YN ++    + G   +  K++  MR
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R +  +V ++   +   C+  R   A RLL+ M   G   NV+ Y  ++ GF +    D
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKD 198

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           + + LF ++ ++G S  + T+N L+    K G+ K    L+ ++ +RG+ P+  TY   I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               +  +++ A  M   +   G  PDV TY  LI+GLC     +EA      +    LE
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   YN +I GYCK G    A R+L      G VP+  +Y S I  LC +G+   A  L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNN 572
            N+ L  G+KP+V LYN L +  +N
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSN 403



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 178/416 (42%), Gaps = 24/416 (5%)

Query: 66  AQTLILKIISGRITSSSFTPRSL---LCHLTQ------LFPSSSNPVTKSR--LYESIID 114
           A+ +++  +        FT RSL   LCH  +      LF  +     K    LY ++I 
Sbjct: 340 AERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVEL 173
                 L  +A     +M + G+ P   TFN L+  + K  C  D   L           
Sbjct: 400 GLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+++F ILI G      +  A E+L+ + + G  P+V  Y SL++G CK    E     +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETY 519

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + + E G      T+ +L+  L +           E+M+   V+P   T+  LI  +C  
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579

Query: 294 GKVSEGFKLFDEMRH-REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           G +   + LF +M     V+C+  TYN +I    +++ V  AE+L  +M    + P+  T
Sbjct: 580 GDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  ++DGFC  G  D  ++   ++  NG  PS+ T   +I           A+ ++  M 
Sbjct: 640 YRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKA---FEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++G+ P  V      ++    D  E A     +  L++KS  +   Y Y +L  GL
Sbjct: 700 QKGLVPEAV------NTIFDHDKKEVAAPKLVLEDLLKKSCIT--YYAYELLFDGL 747


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 254/555 (45%), Gaps = 53/555 (9%)

Query: 25  PLKAFSLFNW--ASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKIISGRITSS 81
           P  +++LF W  +S    +H+ QS   ++ +L    +   H   AQ+L+ KI      S+
Sbjct: 57  PCLSWALFKWIESSIPNYKHSLQSSWTMIHIL----TKFKHLKTAQSLLEKIAYRDFLST 112

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
               +S+L  L +L     +P   S ++  ++  +  +++  +A+  F  M+ +G RP  
Sbjct: 113 ----QSVLSALVRL---HDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHL 165

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           +    LL  + K    D  W                                  +V  ++
Sbjct: 166 HACTVLLNSLAKDRLTDMVW----------------------------------KVYKKM 191

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
             +G   N+ +Y  LI  CCK+GD+E+A  L  ++    +     TY  LI    K G+ 
Sbjct: 192 ARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMH 251

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +     ++M+  G+ P + TYN LIH +C EG++ E  +LF E+R  +   N VTY TL
Sbjct: 252 YEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTL 309

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I G C+   + +A RL ++M+  G+ P V+TYN ++   C+ G    A +L N++     
Sbjct: 310 IDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKI 369

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P  VT N LI A+ K G+ K A  +   M E G+   + TY  LI  F +  +M+ A E
Sbjct: 370 EPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKE 429

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +   M  +GFSP   TY  L+ G C + N +   KL +      L  +  +Y  +I  +C
Sbjct: 430 LLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFC 489

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K      A ++   M EKG + +   Y+S      + GK   A  LL++M K  L  ++ 
Sbjct: 490 KREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLK 549

Query: 562 LYNIL---YRAKNNI 573
           +Y  L   Y   N+I
Sbjct: 550 IYRALNASYAGDNSI 564


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 215/431 (49%), Gaps = 39/431 (9%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG-CCKNGDIERAKMLF 233
           ++++G+++ GCC A           +L   G   +     +++   CC     +  K+L 
Sbjct: 8   IFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGV-SPSLYTYNCLIHEYC 291
           R++ ELG V    +Y +++  L  +   +   +    M +  GV SP + TYN +IH + 
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            EGK+ +   L+ EM  +    +VVT+N++I  LCK   V  AE LL QM   G+ PN +
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TY  +I G+   G  ++A ++F ++   G  P +V++N  + +  K G SK A+++   M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 412 EERGITPSEVTY-----------------------------------TILIDSFVRSDDM 436
             +G  P+ VTY                                   TILID++ +   M
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++A  + S MQ  G SPDV+TY  LI  LC  G + +A   FN M  T ++PN VVY+ +
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           I G+C  G+  +A  L+ EM   G+  PNIA ++S +  +C++G+  +A  + + +  +G
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427

Query: 556 LKPSVSLYNIL 566
            +  + ++N L
Sbjct: 428 ERSDIIMFNTL 438



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 221/498 (44%), Gaps = 37/498 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + SII+A  K+R  D A     QM+D+GV P   T+ S++        +++    F E  
Sbjct: 154 HNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMT 213

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  + D+ S+   +   C+ G   +A E+   +   G  PN+V Y  L+ G    G   
Sbjct: 214 GRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFA 273

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
                F  +   G+VA    +T+LI    K G+  +      +MQ  G+SP ++TY+ LI
Sbjct: 274 DMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLI 333

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG----------------------- 324
              C  G++++    F++M    V  N V Y++LI G                       
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393

Query: 325 -------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                        +CKE RV +A  + D +K  G   ++I +N LIDG+C  GE  KAF 
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + + + S G  P   TYN L+  + K+G      +L REM ++ I P+ VTY I++D   
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R+     A +M   M   G +  + TY +++ GLC      EA  +F  +    ++ N  
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
             N MI           A  L   +++ GLVPN ++Y   I  L ++G   EA+ + + M
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633

Query: 552 LKLGLKPSVSLYNILYRA 569
            K G  P   L N   R 
Sbjct: 634 EKSGCAPCSRLLNDTIRT 651



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 224/463 (48%), Gaps = 8/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++I    K     +A   +H+M+  G  P   T NS++  + K+ + D   L   +  
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV 178

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V  +  ++  +I G    G   +A ++  ++   G  P++V + S +D  CK+G  +
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSK 238

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  +   G      TY +L+ G    G   D   F+  M+ +G+  +   +  LI
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + E   +  EM+ + ++ +V TY+TLI  LC+  R+ +A    +QM   G+ 
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMAS- 405
           PN + Y+ LI GFC  G+  KA  L  ++ +NG   P++  +N ++ +  K G    A  
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 406 --DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             DLV+++ ER      + +  LID +    +M KAF +   M  +G  PD +TY  L++
Sbjct: 419 IFDLVKDIGER---SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVN 475

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G    G + +   LF  M + K++P  V YN+++ G  + G +  A ++L EM   G   
Sbjct: 476 GYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ +Y+  +  LC++    EA V+  ++  + +K +++  N +
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTM 578



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 201/405 (49%), Gaps = 5/405 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  +I G  + G + KA  + +++ + GF P+VV + S+I+  CK   ++ A++L 
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++ + G+   + TYT +I G    G  ++  + + +M   G+ P + ++N  +   C  
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  E  ++F  M  +    N+VTY  L+ G   E    +     + MK  GI  N + +
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LID +   G  D+A  + ++++  G SP V TY+ LI A  + G    A D   +M  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            G+ P+ V Y  LI  F    D+ KA E+ Y +M      P++  +  ++H +C +G + 
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A  +F+ + +     + +++N +I GYC  G   +A  +L  M   G+ P+  +Y++ +
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI----LYRAKNNI 573
               + G+  +   L  +M    +KP+   YNI    L+RA   +
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTV 519



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 209/438 (47%), Gaps = 2/438 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           + S +D+  K   S +A   F+ M   G RP   T+  LL  +  + C  D    F +  
Sbjct: 224 WNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK 283

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +   F ILI    + G +++A  +L++++  G SP+V  Y++LI   C+ G + 
Sbjct: 284 GDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLA 343

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCL 286
            A   F ++   G+      Y  LI G   +G      E   +M  NG+  P++  +N +
Sbjct: 344 DAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSI 403

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H  C EG+V +   +FD ++      +++ +NTLI G C    + +A  +LD M  AGI
Sbjct: 404 VHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGI 463

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  TYN L++G+  +G  D    LF ++      P+ VTYN+++    +AG +  A  
Sbjct: 464 GPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQK 523

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ EM   G T S  TY I++    R++  ++A  M+  +       ++ T   +I+ + 
Sbjct: 524 MLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMY 583

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                +EA  LF+++ ++ L PN   Y +MI    KEG+   A  +   M + G  P   
Sbjct: 584 TVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSR 643

Query: 527 SYSSTIGVLCQDGKWPEA 544
             + TI  L + G+  +A
Sbjct: 644 LLNDTIRTLLEKGEIVKA 661



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 191/396 (48%), Gaps = 2/396 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCC 186
           +F+ M   G+      F  L+    K    D+  L  SE + + +  DV+++  LI   C
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G L  A +  NQ+   G  PN V+Y SLI G C +GD+ +AK L  ++   G+     
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397

Query: 247 TY-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            +   ++  + K G   D    ++ ++  G    +  +N LI  YC  G++ + F + D 
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    +  +  TYNTL+ G  K  R+ +   L  +M    I P  +TYN ++DG   AG 
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           T  A ++ +++   G + S+ TYN++++   +   +  A  + +++    +  +  T   
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I+S       E+A +++S +  SG  P+  TYG++I  L  +G+++EA  +F+SM ++ 
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
             P   + N  I    ++G   +A   + +++ K +
Sbjct: 638 CAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 186/392 (47%), Gaps = 22/392 (5%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    ++  +IDA+ K  + D+A+    +M   G+ P   T+++L+  + +         
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGC 220
            F++     V+ +   +  LI+G C  GDL KA E++ ++   G   PN+  + S++   
Sbjct: 348 KFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSI 407

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G +  A  +F  + ++G  +    +  LI G    G     F   + M   G+ P  
Sbjct: 408 CKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +TYN L++ Y   G++ +G  LF EM  +++    VTYN ++ GL +  R   A+++L +
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G + ++ TYN ++ G C    TD+A  +F +L +     ++ T N +I +      
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A DL   + + G+ P+  TY I+I + ++   +E+A  M+S M+KSG +P       
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP------- 640

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                         S+L N    T LE  ++V
Sbjct: 641 -------------CSRLLNDTIRTLLEKGEIV 659



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 40/365 (10%)

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           T  TY V++ G  +    + G  F+ ++   G+       N ++   C   +  +  K+ 
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 304 DEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGI-SPNVITYNKLIDG 359
              R  E+ C  +  +Y  ++  LC + R Q+A  LL  M K  G+ SP+V+TYN +I G
Sbjct: 67  LR-RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F   G+  KA  L++++   G  P VVT+N +I A  KA     A  L+R+M + G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           +VTYT +I  +      E+A +M+  M   G  PD+ ++   +  LC  G  KEA+++F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEG----------------------------NSY---- 507
           SM      PN V Y +++ GY  EG                            ++Y    
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 508 ---RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A+ +L EM  +GL P++ +YS+ I  LC+ G+  +A    NQM+  G++P+  +Y+
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 565 ILYRA 569
            L + 
Sbjct: 366 SLIQG 370


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 234/464 (50%), Gaps = 12/464 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------L 162
           Y S+I+ ++K  L   A     +M+     P   T+  LL       SF  GW      L
Sbjct: 153 YSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILL-----DGSFKAGWQDIALDL 207

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           +    +  ++ +V+     +     +G + +A E++ ++   G  P++V YT+L+DG  K
Sbjct: 208 YSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLK 267

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +G +  A  L +++    +V    T+ VLI  LFK G + D    Y  M+  G+SP L T
Sbjct: 268 SGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KSDTESIYSAMREMGLSPDLAT 326

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN +++    +G  +   +L++EM+ R++  N +T N +I GLC+  R++ A  +L +M 
Sbjct: 327 YNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMV 386

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           + G+ P   TY  L++    +   D   +    L +         YN+LI    K G ++
Sbjct: 387 LMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTR 446

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A+ ++++MEERGI     TY  LI  +  S  +++AF  YS M     SPD+ TY +L+
Sbjct: 447 KATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLL 506

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            GL   G + EA  L + + +  L PN   Y  ++ G+CK  N+   LR+  EM  KG +
Sbjct: 507 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 566

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P   +Y+  IG   + GK  +A+ L+N+M   G+ P+ + Y+IL
Sbjct: 567 PKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDIL 610



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 227/499 (45%), Gaps = 47/499 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG------WL 162
           Y  ++DA  K+    +AL     M+      R N F+ +   V+    F  G      +L
Sbjct: 48  YTILLDALFKAGKVAEALMTLACMI-----VRGNNFDVIACTVLIDGLFKSGQIKEAEYL 102

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F +  +  +  +  ++  LI   C+ GD+N A   L+++EE    PNV+ Y+SLI+G  K
Sbjct: 103 FCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVK 162

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS----- 277
            G +  A  + RK+     +    TY +L+ G FK G Q    + Y KM+  G+      
Sbjct: 163 QGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFI 222

Query: 278 ------------------------------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                                         P L  Y  L+  +   GKVS    L  EM 
Sbjct: 223 LDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMT 282

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  ++VT+N LI  L K +   + E +   M+  G+SP++ TYN +++G    G   
Sbjct: 283 SKNVVFDIVTFNVLINCLFK-LGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 341

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  L+N++KS    P+ +T N++I    +AG  + A D+++EM   G+ P+  TY IL+
Sbjct: 342 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 401

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   +S   +   + + L+       D   Y +LI  LC  G  ++A+ +   M E  + 
Sbjct: 402 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 461

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            +   YN +I GYC   +  RA      M  + + P+I +Y+  +G L + G   EA+ L
Sbjct: 462 ADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDL 521

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+++ K GL P+   Y  L
Sbjct: 522 LSEIKKRGLVPNACTYETL 540



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGD 190
           M+ SG+ P   TF S+L  + K     +G L   E  +  + L+  S+ IL+    +AG 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +A   L  +   G + +V+  T LIDG  K+G I+ A+ LF  + +L LV    TY+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI    K G          +M+     P++ TY+ LI+ Y  +G + + FK+  +M H+ 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              N+ TY  L+ G  K      A  L  +MK  G+  NV   +  ++    +G  ++A 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            L  ++ S G  P +V Y  L+  F K+G    A +L +EM  + +    VT+ +LI+  
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 431 VR--SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            +    D E    +YS M++ G SPD+ TY  +++G   KGN   A +L+N M   KL P
Sbjct: 301 FKLGKSDTE---SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIP 357

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N +  N+MI G C+ G    A+ +L EM   GL P   +Y   + +     K   A+ +L
Sbjct: 358 NAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNI---SSKSRRADTIL 414

Query: 549 NQ---MLKLGLKPSVSLYNIL 566
                ++ + LK    +YNIL
Sbjct: 415 QTHELLVNMQLKVDKDVYNIL 435



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 18/459 (3%)

Query: 112 IIDAHL----KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           I+DA +    +S   ++A     +M   G++P    + +L+   +KS           E 
Sbjct: 222 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 281

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K V  D+ +F +LI    + G  +    + + + EMG SP++  Y ++++G  K G+ 
Sbjct: 282 TSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNW 340

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++    L+    T  ++I GL + G  ++  +  ++M L G+ P+  TY  L
Sbjct: 341 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 400

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++      +     +  + + + ++  +   YN LI  LCK    ++A  +L  M+  GI
Sbjct: 401 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI 460

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +  TYN LI G+C +    +AF  ++ + S   SP + TYN+L+   SKAG    A D
Sbjct: 461 IADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADD 520

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ E+++RG+ P+  TY  L+    +  + ++   +Y  M   GF P    Y +LI    
Sbjct: 521 LLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFS 580

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN----------SYR--ALRLLG 514
             G MK+A +L N M    + P    Y+++I G+C              SYR  A RL  
Sbjct: 581 KMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFI 640

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           EMN++G VP  ++ +         GK  +A +LL    K
Sbjct: 641 EMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYK 679



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 14/403 (3%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S N V     +  +I+   K   SD    Y   M + G+ P   T+N++L    K  ++
Sbjct: 282 TSKNVVFDIVTFNVLINCLFKLGKSDTESIY-SAMREMGLSPDLATYNTMLNGNFKKGNW 340

Query: 158 DKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
                 ++E +  K+  +  +  I+I G CEAG +  A ++L ++  MG  P    Y  L
Sbjct: 341 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 400

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++   K+   +        +  + L   +  Y +LI  L K G+ +      + M+  G+
Sbjct: 401 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI 460

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                TYN LIH YC    +   F  +  M    V+ ++ TYN L+ GL K   + EA+ 
Sbjct: 461 IADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADD 520

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL ++K  G+ PN  TY  L+ G C    T +  R++ ++   G  P    YN+LI  FS
Sbjct: 521 LLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFS 580

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILI------------DSFVRSDDMEKAFEMYS 444
           K G  K A +L+ EM+ +G++P+  TY ILI             S ++     +A  ++ 
Sbjct: 581 KMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFI 640

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            M   GF P   T   +       G   +A  L  S ++ K E
Sbjct: 641 EMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRKRE 683


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 221/434 (50%), Gaps = 4/434 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           ML  G +P   T+  LL  V KS  F +      E R K    ++ ++ ++I G C  G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A E+LN+L   GF P++V YT+++ G C     +  K+LF ++ +   V  + T+ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+    + G+ +   +  ++M  +G +P+    N +I+  C +G+V + +   + M    
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              + ++Y T++ GLC+  R + A+ LL +M      PN +T+N  I   C  G  ++A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L   +   G S  +VTYN L+  F   G    A +L   +      P+ +TYT L+   
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 474

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             ++ ++ A E+ + M +     +  T+ VL+   C KG ++EA +L N M E    PN 
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           + +N ++ G  K+ NS  AL LL  +  KG+  +  +YSS + VL ++ +  EA  +L+ 
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 551 MLKLGLKPSVSLYN 564
           +  +G++P V +YN
Sbjct: 595 VQDMGMRPKVGMYN 608



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     +R  D     F +M+D    P   TF+ L+ F  +    ++        S
Sbjct: 260 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 319

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           ++ C     + +  I+I   C+ G ++ A++ LN +   G +P+ + YT+++ G C+ G 
Sbjct: 320 QHGCTPNTTLCN--IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 377

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L  ++        + T+   IC L + GL +   +  E M   G S  + TYN 
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 437

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H +C +G+V    +LF+ +       N +TY TL+ GLC   R+  A  LL +M    
Sbjct: 438 LVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAEMIQKD 494

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              N +T+N L+  FC  G  ++A  L NQ+  +G +P+++T+N L+   +K  NS+ A 
Sbjct: 495 CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEAL 554

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +  +G++   +TY+ ++D   R D  E+A +M   +Q  G  P V  Y  ++  L
Sbjct: 555 ELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFAL 614

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C +    +A   F  M      PN+  Y ++I G   EG    A  +L E+  KG++
Sbjct: 615 CKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 178/364 (48%), Gaps = 3/364 (0%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           + G  P+VV YT L++  CK+     A  +  ++   G      TY V+I G+ + G   
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D  E   ++   G  P + +Y  ++   C   +  +   LF EM  ++   N VT++ L+
Sbjct: 240 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
              C+   V+ A ++L QM   G +PN    N +I+  C  G  D A+   N +   G +
Sbjct: 300 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 359

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  ++Y  ++R   +AG  + A +L+ EM  +   P+EVT+   I    +   +E+A ++
Sbjct: 360 PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKL 419

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             LM + G S  + TY  L+HG C++G +  A +LFN++     EPN + Y  ++ G C 
Sbjct: 420 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCH 476

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                 A  LL EM +K    N  +++  +   CQ G   EA  L+NQM++ G  P++  
Sbjct: 477 AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 536

Query: 563 YNIL 566
           +N L
Sbjct: 537 FNTL 540



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 3/296 (1%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G  PS+ TY  L+   C      E   + DEMR +    N+VTYN +I G+C+E R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +A+ +L+++   G  P++++Y  ++ G C A   D    LF ++      P+ VT+++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+R F + G  + A  ++++M + G TP+     I+I++  +   ++ A++  + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            +PD  +Y  ++ GLC  G  + A +L   M      PN+V +N  I   C++G   +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +L+  M E G    I +Y++ +   C  G+   A  L N    L  +P+   Y  L
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTL 470



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 100/190 (52%)

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  PSVVTY VL+ A  K+     A +++ EM  +G TP+ VTY ++I+   R   ++ A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            E+ + +   GF PD+ +Y  ++ GLC      +   LF  M + K  PN+V ++M++  
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +C+ G   RA+++L +M++ G  PN    +  I  +C+ G+  +A   LN M   G  P 
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 560 VSLYNILYRA 569
              Y  + R 
Sbjct: 362 TISYTTVLRG 371



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 63/125 (50%)

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           S M + G  P V TY VL+  +C      EA  + + M      PN V YN++I G C+E
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A  +L  ++  G  P+I SY++ +  LC   +W + +VL  +M+     P+   +
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 564 NILYR 568
           ++L R
Sbjct: 296 DMLVR 300


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 243/487 (49%), Gaps = 3/487 (0%)

Query: 83  FTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           +  R  + H  Q F S  +      S +Y S+I A+   R  ++AL    +M + G+   
Sbjct: 284 YARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMT 343

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLN 199
             T++ ++    K    D    +F E + K+  L+  ++G +I   C+  ++++A  ++ 
Sbjct: 344 IVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVR 403

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++E  G    + IY +++DG    G+ E+  ++F ++ E G   +  +Y  LI    K G
Sbjct: 404 EMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIG 463

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 +  + M+++G+  ++ TY+ LI+ +      +  F +F++     +  +VV YN
Sbjct: 464 KVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYN 523

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I   C    +  A  ++ QM+     P   T+  +I GF  AGE  +A  +F+ ++ +
Sbjct: 524 NIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRS 583

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P+V TYN LI    +      A  ++ +M   G+ P+E TYT L+  +    D EKA
Sbjct: 584 GCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F+ +S+++  G   DVYTY  L+   C  G M+ A  +   M    +  N  VYN++I G
Sbjct: 644 FQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDG 703

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           + + G+ + A  L+ +M ++G++P+I +Y+S +   C+ G   +A  ++ +M   G+KP+
Sbjct: 704 WARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPN 763

Query: 560 VSLYNIL 566
           +  Y  L
Sbjct: 764 LKTYTTL 770



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 216/458 (47%), Gaps = 40/458 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  I+    K   +D A  +F +  +      + T+ S++    ++C+ D+      E  
Sbjct: 347 YSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREME 406

Query: 169 CK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +     +D+Y    ++ G    G+  K   V ++L+E GFSP+V+ Y  LI+   K G 
Sbjct: 407 VQGIDAPIDIYH--TMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGK 464

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN- 284
           + +A  + + +   G+     TY++LI G  K     + F  +E    +G+ P +  YN 
Sbjct: 465 VSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNN 524

Query: 285 ---------------CL-------------------IHEYCNEGKVSEGFKLFDEMRHRE 310
                          C+                   IH +   G++    ++FD MR   
Sbjct: 525 IITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSG 584

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               V TYN LI GL ++ ++ +A  +LDQM +AG+ PN  TY  L+ G+   G+T+KAF
Sbjct: 585 CIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAF 644

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           + F+ L++ G    V TY  L+++  K+G  + A  + +EM  + I  +   Y ILID +
Sbjct: 645 QYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGW 704

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R  D+ +A ++   M+K G  PD++TY   ++  C  G+M++A+++   M    ++PN 
Sbjct: 705 ARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNL 764

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
             Y  +I G+ +     +AL    EM    L P+ A+Y
Sbjct: 765 KTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAY 802



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 169/354 (47%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y  ++    + GD+  A+  F  +   G+  + H Y+ LI         ++      KM+
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+  ++ TY+ ++  +   GK       F E + +  + N VTY ++I   C+   + 
Sbjct: 337 EEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMD 396

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
            AE L+ +M++ GI   +  Y+ ++DG+   G  +K   +F++LK  G SPSV++Y  LI
Sbjct: 397 RAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLI 456

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             ++K G    A  + + M+  GI  +  TY++LI+ F++  D   AF ++    K G  
Sbjct: 457 NLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 516

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PDV  Y  +I   C   NM  A  +   M + +  P    +  +I G+ + G   RAL +
Sbjct: 517 PDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEI 576

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              M   G +P + +Y++ I  L +  K  +A  +L+QM   G+ P+   Y  L
Sbjct: 577 FDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTL 630



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 194/424 (45%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +G+++K     GD++ A +    ++  G  P+  +Y+SLI       D+E A    RK+ 
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  T  TY++++ G  K G       ++++ +    S +  TY  +I+ +C    + 
Sbjct: 337 EEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMD 396

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI------ 351
               L  EM  + +   +  Y+T++ G       ++   + D++K  G SP+VI      
Sbjct: 397 RAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLI 456

Query: 352 -----------------------------TYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
                                        TY+ LI+GF    +   AF +F     +G  
Sbjct: 457 NLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 516

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VV YN +I AF    N   A  +V++M++    P+  T+  +I  F R+ +M +A E+
Sbjct: 517 PDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEI 576

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M++SG  P V+TY  LI GL  K  M +A  + + M    + PN+  Y  ++ GY  
Sbjct: 577 FDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYAS 636

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A +    +  +GL  ++ +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 637 LGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFV 696

Query: 563 YNIL 566
           YNIL
Sbjct: 697 YNIL 700



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 1/367 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I+ + K     +AL     M  SG++    T++ L+   +K   +   +  F +  
Sbjct: 452 YGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 511

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ DV  +  +I   C   ++++A  ++ Q+++  + P    +  +I G  + G++ 
Sbjct: 512 KDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMR 571

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +F  +   G + T HTY  LI GL +           ++M + GV P+ +TY  L+
Sbjct: 572 RALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLM 631

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y + G   + F+ F  +R+  +  +V TY  L+   CK  R+Q A  +  +M    I 
Sbjct: 632 QGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 691

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q++  G  P + TY   + A  KAG+ + A+++
Sbjct: 692 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEI 751

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++EME  GI P+  TYT LI+ + R+   EKA   +  M+ +   PD   Y  L+  L  
Sbjct: 752 IQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLS 811

Query: 468 KGNMKEA 474
           +    ++
Sbjct: 812 RATFAQS 818



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 190/392 (48%), Gaps = 3/392 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +++D +      ++ L  F ++ + G  P   ++  L+    K     K  L  S+ 
Sbjct: 416 IYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKA-LQISKM 474

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                ++ ++ ++ +LI G  +  D   AF V     + G  P+VV+Y ++I   C   +
Sbjct: 475 MKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSN 534

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++RA  + +++ +     T  T+  +I G  + G  +   E ++ M+ +G  P+++TYN 
Sbjct: 535 MDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNA 594

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI     + K+++   + D+M    V  N  TY TL+ G       ++A +    ++  G
Sbjct: 595 LILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEG 654

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +  +V TY  L+   C +G    A  +  ++ +     +   YN+LI  +++ G+   A+
Sbjct: 655 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 714

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           DL+++M + G+ P   TYT  +++  ++ DM+KA E+   M+  G  P++ TY  LI+G 
Sbjct: 715 DLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGW 774

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
                 ++A   F  M   +L+P+   Y+ ++
Sbjct: 775 ARASMPEKALSCFEEMKLAELKPDKAAYHCLM 806



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 135/286 (47%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   Y  ++  Y   G +    + F+ M+ R +  +   Y++LI        ++EA   
Sbjct: 272 PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHC 331

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           + +MK  GI   ++TY+ ++ GF   G+ D A   F + K    S + VTY  +I A  +
Sbjct: 332 VRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQ 391

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
             N   A  LVREME +GI      Y  ++D +    + EK   ++  +++ GFSP V +
Sbjct: 392 TCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVIS 451

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG LI+     G + +A ++   M  + ++ N   Y+M+I G+ K  +   A  +  +  
Sbjct: 452 YGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 511

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + GL P++  Y++ I   C       A  ++ QM K   +P+   +
Sbjct: 512 KDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTF 557



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 84/186 (45%)

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           + P+   Y ++++ +++ G+   A      M+ RGI PS   Y+ LI ++    DME+A 
Sbjct: 270 KKPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEAL 329

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
                M++ G    + TY +++ G    G    A   F    E     N V Y  +I+ +
Sbjct: 330 HCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAH 389

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+  N  RA  L+ EM  +G+   I  Y + +      G   +  ++ +++ + G  PSV
Sbjct: 390 CQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSV 449

Query: 561 SLYNIL 566
             Y  L
Sbjct: 450 ISYGCL 455



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 69/154 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   P+   Y +++  + R  DM  A + +  MQ  G  P  + Y  LIH   +  +M+
Sbjct: 267 ERIKKPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDME 326

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA      M E  +E   V Y++++ G+ K G +  A     E  EK    N  +Y S I
Sbjct: 327 EALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSII 386

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              CQ      AE L+ +M   G+   + +Y+ +
Sbjct: 387 YAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTM 420


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 232/496 (46%), Gaps = 36/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++ID   K+++ D+A   F  M+D GVRP ++T+  L+   + +  + +      E  
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264

Query: 167 ---------------------NRCKVELDVYS-------------FGILIKGCCEAGDLN 192
                                 RC    +++              +GIL+ G    G L+
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +    L+ +   G SP+  I+  + +   K   I+ A  +F K+ +  L      Y  LI
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALI 384

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   D    + +M   GV+P ++ ++ L++  C   K  +  KLF E+  + + 
Sbjct: 385 DALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIR 444

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N   +N L+C LC+E RV EA+RL+D M    + P+VI+YN L+DG C  G  D+A +L
Sbjct: 445 LNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKL 504

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
            + + S G  P   TYN L+  + KA     A  L REM  +G+TP  VTY  ++    +
Sbjct: 505 LDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQ 564

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                +A E+Y  M  +    D+YTY ++++GLC    + EA K+F S+    L+ +   
Sbjct: 565 IGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFT 624

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N+MI    K G    A+ L   ++  GLVP++ +Y      L ++G   E + L + M 
Sbjct: 625 INIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAME 684

Query: 553 KLGLKPSVSLYNILYR 568
           + G  P+  + N L R
Sbjct: 685 ENGTAPNSRMLNALVR 700



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 38/432 (8%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG---FSPNVVIYTSLIDGCCKNGDIERA 229
           L+V S+ IL+KG C      +A E+++ + + G    +PNVV YT++IDG CK   ++RA
Sbjct: 162 LNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA 221

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K +F+ + + G+    HTYT LI G    G  K+  +  ++M  +G+ P    Y  L+  
Sbjct: 222 KGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDY 281

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG------------------------- 324
            C  G+ +E   +FD +  + +  +V  Y  L+ G                         
Sbjct: 282 LCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPD 341

Query: 325 ----------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                       K+  + EA  + D+M+   +SP V+ Y  LID  C  G  D A   FN
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           Q+ + G +P +  ++ L+         + A  L  E+ ++GI  +   + IL+ +  R  
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            + +A  +  LM +    PDV +Y  L+ G C+ G + EA+KL + M    L+P++  YN
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ GYCK      A  L  EM  KGL P + +Y++ +  L Q G++ EA+ L   M+  
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581

Query: 555 GLKPSVSLYNIL 566
             K  +  Y I+
Sbjct: 582 RRKCDIYTYTII 593



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 194/393 (49%), Gaps = 4/393 (1%)

Query: 178 FGILIKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           FG L+KG C+A  +++A ++L  ++ E G + NV+ Y  L+ G C     E A  L   +
Sbjct: 131 FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM 190

Query: 237 GELG---LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            + G         TYT +I GL K  +       ++ M   GV P+ +TY CLIH Y + 
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLST 250

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK  E  ++  EM    +  + V Y  L+  LCK  R  EA  + D +   GI P+V  Y
Sbjct: 251 GKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIY 310

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             L+ G+   G   +     + +  NG SP    +N++  A++K      A  +  +M +
Sbjct: 311 GILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQ 370

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + ++P  V Y  LID+  +   ++ A   ++ M   G +PD++ +  L++GLC     ++
Sbjct: 371 QWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEK 430

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A KLF  + +  +  N   +N+++   C+EG    A RL+  M    + P++ SY++ + 
Sbjct: 431 AEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVD 490

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C  G+  EA  LL+ M+ +GLKP    YN L
Sbjct: 491 GHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 201/418 (48%), Gaps = 5/418 (1%)

Query: 122 SDQALFYFHQMLD----SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
           ++ AL   H  LD    +GV P  + FN +     K    D+    F + R + +   V 
Sbjct: 319 TEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVV 378

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G LI   C+ G ++ A    NQ+   G +P++ +++SL+ G C     E+A+ LF ++
Sbjct: 379 NYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G+      + +L+C L + G   +     + M    V P + +YN L+  +C  G++
Sbjct: 439 LDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRI 498

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL D M    +  +  TYNTL+ G CK  R+ +A  L  +M M G++P V+TYN +
Sbjct: 499 DEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTI 558

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           + G    G   +A  L+  + +N +   + TY +++    +      A  + + +  + +
Sbjct: 559 LHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDL 618

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
                T  I+I + ++    E A ++++ +   G  PDV TY ++   L  +G+++E  +
Sbjct: 619 QLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDE 678

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           LF++M E    PN  + N ++      G+  RA   L +++EK      ++ S  I +
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISI 736



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 181/399 (45%), Gaps = 44/399 (11%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++IDA  K    D A+  F+QM++ GV P    F+SL   V   C+ DK W     LF
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSL---VYGLCTVDK-WEKAEKLF 435

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      + L+   F IL+   C  G + +A  +++ +  +   P+V+ Y +L+DG C  
Sbjct: 436 FEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A  L   +  +GL                                    P  +TY
Sbjct: 496 GRIDEAAKLLDVMVSIGL-----------------------------------KPDEFTY 520

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L+H YC   ++ + + LF EM  + +   VVTYNT++ GL +  R  EA+ L   M  
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMIN 580

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
                ++ TY  +++G C     D+AF++F  L S      + T N++I A  K G  + 
Sbjct: 581 NRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKED 640

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL   +   G+ P   TY ++ ++ ++   +E+  E++S M+++G +P+      L+ 
Sbjct: 641 AMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            L  +G++  A    + + E          +M+I  Y +
Sbjct: 701 WLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 157/331 (47%), Gaps = 40/331 (12%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN-VVTYNTLICGLCKEMRVQEA 334
           V+PS  TY  LI  +C  G++  GF  F  +     + N  V +  L+ GLC   RV EA
Sbjct: 88  VAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA 147

Query: 335 -ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG---QSPSVVTYNV 390
            + LL +M   G + NVI+YN L+ G C+    ++A  L + +  +G    +P+VVTY  
Sbjct: 148 TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTT 207

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +I    KA     A  + + M ++G+ P+  TYT LI  ++ +   ++  +M   M   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG------ 504
             PD   Y VL+  LC  G   EA  +F+S+    ++P+  +Y +++ GY  EG      
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327

Query: 505 ----------------------NSY-------RALRLLGEMNEKGLVPNIASYSSTIGVL 535
                                 N+Y        A+ +  +M ++ L P + +Y + I  L
Sbjct: 328 SFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDAL 387

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ G+  +A +  NQM+  G+ P + +++ L
Sbjct: 388 CKLGRVDDAVLKFNQMINEGVTPDIFVFSSL 418



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 13/283 (4%)

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLI-------CGLCKEMRVQEAERLLDQMKMAGISP 348
           + +  KLFDEM       +V T+N L+       C    E+ V    R++ +  +  ++P
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVK-VAP 90

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGNSKMASD- 406
           +  TY  LI  FC  G     F  F  +   G S  + V +  L++    A     A+D 
Sbjct: 91  SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG---FSPDVYTYGVLIH 463
           L+R M E G T + ++Y IL+         E+A E+  +M   G    +P+V TY  +I 
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC    +  A  +F  M +  + PN+  Y  +I GY   G     +++L EM+  GL P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   Y+  +  LC++G+  EA  + + +++ G+KP V++Y IL
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGIL 313


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 223/438 (50%), Gaps = 2/438 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+     +++ G +P   T+N+L+  + K+  F +  ++  +   + +E D Y++  L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+ G +  A  ++      GF P+   Y SLIDG C  G+  RA  LF +    G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 Y  LI GL   G+  +  +   +M   G+ P + T+N L++  C  G VS+   
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L   M  +    ++ T+N LI G   +++++ A  +LD M   G+ P+V TYN L++G C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
              + +     +  +   G +P++ T+N+L+ +  +      A  L+ EM+ + + P  V
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKS-GFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           T+  LID F ++ D++ A+ ++  M+++   S    TY ++IH    K N+  A KLF  
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  L P+   Y +M+ G+CK GN     + L EM E G +P++ +    I  LC + +
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687

Query: 541 WPEAEVLLNQMLKLGLKP 558
             EA  ++++M++ GL P
Sbjct: 688 VYEAAGIIHRMVQKGLVP 705



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 214/459 (46%), Gaps = 1/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I+   + S   DQA   + +M D G+ P   +F   +    K+          +   
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            +  E++V ++  ++ G  E     + +E+  ++   G S  +  +  L+   CK GD++
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             + L  K+ + G++    TY + I GL + G           +   G  P + TYN LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C   K  E      +M +  +  +  TYNTLI G CK   VQ AER++      G  
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TY  LIDG C  GET++A  LFN+    G  P+V+ YN LI+  S  G    A+ L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM E+G+ P   T+ IL++   +   +  A  +  +M   G+ PD++T+ +LIHG   
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +  M+ A ++ + M +  ++P+   YN ++ G CK       +     M EKG  PN+ +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++  +  LC+  K  EA  LL +M    + P    +  L
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 236/519 (45%), Gaps = 63/519 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           + + LF      G+     + + +LR+L  K         + L+ K+I   +  + FT  
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE---CEKLLDKVIKRGVLPNLFTYN 255

Query: 87  SL---LCHLTQLFPS--------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
                LC   +L  +           P      Y ++I    K+    +A  Y  +M++ 
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-------DVYSFGILIKGCCEA 188
           G+ P S T+N+L+        + KG +     R   +        D +++  LI G C  
Sbjct: 316 GLEPDSYTYNTLI------AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+ N+A  + N+    G  PNV++Y +LI G    G I  A  L  ++ E GL+    T+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429

Query: 249 TVLICGLFKNGLQKDG-----------------------------------FEFYEKMQL 273
            +L+ GL K G   D                                     E  + M  
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           NGV P +YTYN L++  C   K  +  + +  M  +  A N+ T+N L+  LC+  ++ E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLI 392
           A  LL++MK   ++P+ +T+  LIDGFC  G+ D A+ LF +++   + S S  TYN++I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
            AF++  N  MA  L +EM +R + P   TY +++D F ++ ++   ++    M ++GF 
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           P + T G +I+ LC++  + EA+ + + M +  L P  V
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 189/391 (48%), Gaps = 3/391 (0%)

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGF---SPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           G+ +      G   K  E +N  E M F    P V  Y +++     +G  ++A  ++ +
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + + G+    +++T+ +    K             M   G   ++  Y  ++  +  E  
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
            +EG++LF +M    V+  + T+N L+  LCK+  V+E E+LLD++   G+ PN+ TYN 
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
            I G C  GE D A R+   L   G  P V+TYN LI    K    + A   + +M   G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P   TY  LI  + +   ++ A  +      +GF PD +TY  LI GLC +G    A 
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LFN      ++PN ++YN +I G   +G    A +L  EM+EKGL+P + +++  +  L
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ G   +A+ L+  M+  G  P +  +NIL
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 2/385 (0%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQHT 247
           D  KA E+ N + +E+GF   +  Y S+I+     G  E  + +   + E +G    +  
Sbjct: 19  DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y   +    + G  ++    +E+M      P++++YN ++    + G   +  K++  MR
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R +  +V ++   +   CK  R   A RLL+ M   G   NV+ Y  ++ GF +     
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           + + LF ++ ++G S  + T+N L+R   K G+ K    L+ ++ +RG+ P+  TY + I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               +  +++ A  M   + + G  PDV TY  LI+GLC     +EA      M    LE
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   YN +I GYCK G    A R++G+    G VP+  +Y S I  LC +G+   A  L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNN 572
            N+ L  G+KP+V LYN L +  +N
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSN 403



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 178/413 (43%), Gaps = 18/413 (4%)

Query: 66  AQTLILKIISGRITSSSFTPRSL---LCHLTQ------LFPSSSNPVTKSR--LYESIID 114
           A+ ++   +        FT RSL   LCH  +      LF  +     K    LY ++I 
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVEL 173
                 +  +A    ++M + G+ P   TFN L+  + K  C  D   L           
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+++F ILI G      +  A E+L+ + + G  P+V  Y SL++G CK    E     +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           + + E G      T+ +L+  L +     +     E+M+   V+P   T+  LI  +C  
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579

Query: 294 GKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           G +   + LF +M    +V+ +  TYN +I    +++ V  AE+L  +M    + P+  T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  ++DGFC  G  +  ++   ++  NG  PS+ T   +I           A+ ++  M 
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++G+ P  V     +D   + +       +  L++KS  +   Y Y +L  GL
Sbjct: 700 QKGLVPEAVNTICDVD---KKEVAAPKLVLEDLLKKSCIT--YYAYELLFDGL 747


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 205/398 (51%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C   +   S  +++ G C++G +  A ++L+++   G   N + Y SL+D   +  D +R
Sbjct: 137 CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDR 196

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              + + +   G+  T  TYT+L+ GL            +E+M+   +S  +Y Y+ +I+
Sbjct: 197 VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVIN 256

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G V    ++FDE     +  N  TY  LI G CK  +++ AE L+  M++ G+  
Sbjct: 257 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I +N +IDG+C     DKA  +   ++  G    V TYN L     +A     A +L+
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R M E+G+ P+ V+YT LI       DM +A  ++  M  +G  P + TY V++ G   K
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++EA +  N M +  L P+   Y  ++ G+C  G    ALRL  EM ++G  PN+ +Y
Sbjct: 437 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 496

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  L ++G+  EA  L + ML  GL P  +LY+ L
Sbjct: 497 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 445 LMQKSGFSPDVYT---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           L Q +   PD  T     V++ G C  G +  A +L + M    ++ N + YN ++  Y 
Sbjct: 130 LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 189

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +E +  R   +L  M  +G+ P + +Y+  +  L       + E +  +M    L   V 
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249

Query: 562 LYNILYRA 569
            Y+ +  A
Sbjct: 250 FYSSVINA 257


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 236/463 (50%), Gaps = 7/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+I A+ ++R  + A+    +ML  G++     F S++     + + +    +F + 
Sbjct: 168 IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 227

Query: 168 RCKVELDVYSFGI----LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           + +   ++   GI    +++  C+AG++     +L Q+EE GF  N+ +YT++++G  + 
Sbjct: 228 KAE---NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI 284

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            D E+    F ++   GL  T  TY  ++    K G      +  E+M  +GVSP+   Y
Sbjct: 285 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIY 344

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             ++  Y   G  +  FK++++M    +  ++VTYN L+   CK  R+ +A  +L+ ++ 
Sbjct: 345 AMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQA 404

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             + P + TY  ++DG+   G   KA  +F+++K+ G  P VV+YN L+   +KA   + 
Sbjct: 405 NRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMEN 464

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  ++ EM   G+ P+E +YT L + + R+ D+EKAF M+  M+K   + D+  YG L+ 
Sbjct: 465 ARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLK 524

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
             C  G M+ A ++F  + +  L+ N + Y  M+ G+ ++G   +A  LL +M + G   
Sbjct: 525 ACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHL 584

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   Y+S I    + G   E    L  M +  L+ +   Y  L
Sbjct: 585 DTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 627



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 209/424 (49%), Gaps = 1/424 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N V    +Y SI+ A+ ++   +       QM + G +     + ++L    +    +
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 288

Query: 159 KGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K   FF     C +     ++G ++K   +AG++ KA ++L ++++ G SPN +IY  ++
Sbjct: 289 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 348

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  + GD   A  ++  +   GL     TY +L+    K G         E +Q N + 
Sbjct: 349 DGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLL 408

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TY  ++  Y   G + +  ++FD ++   +   VV+YN+L+ GL K  +++ A  +
Sbjct: 409 PTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLM 468

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           LD+M   G+ PN  +Y  L +G+  AG+ +KAF +F ++K    +  +V Y  L++A  K
Sbjct: 469 LDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK 528

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +G  + A ++ +++ + G+  + +TY  ++D + R  ++ KA ++   MQK GF  D   
Sbjct: 529 SGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTIC 588

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y   I      G+ +E ++    M E KLE N   Y  +I G+    +  +A+    +  
Sbjct: 589 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 648

Query: 518 EKGL 521
             GL
Sbjct: 649 ASGL 652



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 36/394 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY ++++   + R  ++ L +FH++   G+ P + T+  ++    K+ +  K      E 
Sbjct: 273 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 332

Query: 167 -------NR----------------------------CKVELDVYSFGILIKGCCEAGDL 191
                  N+                              ++ D+ ++ IL+   C+AG +
Sbjct: 333 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRM 392

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +KA  VL  ++     P +  YTS++DG  K G I++A  +F +I   GL     +Y  L
Sbjct: 393 DKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSL 452

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + GL K    ++     ++M  NGV P+  +Y  L   Y   G V + F +F  M+   +
Sbjct: 453 LSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENL 512

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A ++V Y  L+   CK   +Q A  +  Q+  AG+  N ITY  ++DG+   GE  KA  
Sbjct: 513 AIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARD 572

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L   ++ +G     + Y   I+A  ++G+++  ++ +  M E+ +  +  TYT LI  ++
Sbjct: 573 LLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWL 632

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            + D ++A   Y   + SG   D      L+ GL
Sbjct: 633 AAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 666



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 133/287 (46%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L  Y  L+  Y   G        F+ MR   +  NV  Y +LI    +   ++ A   
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M   GI  N   +  +I G+  AG  + A   F + K+    P  + YN +++A+ +
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AGN +    L+ +MEE G   +   YT +++ F    D EK    +  ++  G SP   T
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 308

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG ++      GNM +A  +   M +  + PN ++Y M++ GY + G+   A ++  +M 
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             GL P+I +Y+  +   C+ G+  +A  +L  +    L P++  Y 
Sbjct: 369 SAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYT 415



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 35/257 (13%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P +  Y  L+D +   G+   A   F  ++++   P+V  Y  LI A+++A + + A   
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +GI  +E  +  +I  +  + + E A   +   +     P    Y  ++   C 
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC-------------------------- 501
            GNM+    L   M E   + N  +Y  ++ G+                           
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 308

Query: 502 ---------KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
                    K GN  +AL +L EM++ G+ PN   Y+  +    + G +  A  +   M+
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368

Query: 553 KLGLKPSVSLYNILYRA 569
             GLKP +  YNIL  A
Sbjct: 369 SAGLKPDIVTYNILVHA 385



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 4/207 (1%)

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           DAG   K    F  +      P +  Y +L+  +++ G+   A      M    I P+  
Sbjct: 112 DAGNWHKIVNAFQVI----DKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVH 167

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            YT LI ++  + DME A      M   G   +   +  +I G    GN + A   F   
Sbjct: 168 IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 227

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               L P  +VYN ++  YC+ GN      LL +M E+G   N+  Y++ +    +    
Sbjct: 228 KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 287

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYR 568
            +     +++   GL P+ + Y  + +
Sbjct: 288 EKCLSFFHRLKACGLSPTAATYGCIVK 314


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 235/451 (52%), Gaps = 1/451 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDV 175
            +++  D+AL  + +M + GV+P +  ++S LI +     +D  ++   E NR KV ++ 
Sbjct: 353 FQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEA 412

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ +++ G C+   L++A ++L      G +P+V  Y+ LI   CK G++  A   +  
Sbjct: 413 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEA 472

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G+    H  + L+    K G+  +   ++ K + +G+      YN  +  YC  G 
Sbjct: 473 MVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 532

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           ++E  KL +EM++  +  + + Y  LI G C +  +Q A+++ ++M  A I P+++TYN 
Sbjct: 533 MNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 592

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L  GFC +G   + F L +++   G  P+ +TY + I  F + GN   A  L   +EE+G
Sbjct: 593 LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 652

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I   EV Y+ ++  ++ S   + A+ ++  + + G   D ++   LI+ LC  GN++ AS
Sbjct: 653 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 712

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M E  + P+ + Y+ +I  YC+ G+  +A     +M ++GL  ++  Y+  +   
Sbjct: 713 NVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGY 772

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ G+  EA  L  QM  LG+KP V  Y +L
Sbjct: 773 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVL 803



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 264/583 (45%), Gaps = 47/583 (8%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           K  P  AF+ F      G  H   + S ++++L       SH+    +++ + S  ++SS
Sbjct: 195 KRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQIL-------SHSRQGKMLVSLFSELVSSS 247

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
           + +   +L  +     + + P + S + + +I A +        +  F  +   GV P  
Sbjct: 248 NASGPEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSV 307

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            T+N LL F+ ++  ++     ++E +C ++  DVY+F I+ +   +A  +++A +V  +
Sbjct: 308 WTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAE 367

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + EMG  P+   Y+S + G C  G  + A ++ ++I    +      Y +++ GL K   
Sbjct: 368 MTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMR 427

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR--EVACNVVTY 318
             +  +  E     G +P +Y Y+ LI  YC  G +      ++ M     E  C++V+Y
Sbjct: 428 LDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSY 487

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             L+    K     EA     + K +G+  + + YN  +D +C  G  ++A +L N++K 
Sbjct: 488 --LLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY 545

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P  + Y  LI  +   G  + A  +  EM +  I P  VTY IL   F +S  + +
Sbjct: 546 GGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVME 605

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            F++   M   G  P+  TYG+ I G C  GN+ EA  LFN + E  ++  +V+Y+ M+ 
Sbjct: 606 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 665

Query: 499 GY-----------------------------------CKEGNSYRALRLLGEMNEKGLVP 523
           GY                                   C+ GN   A  +   M E  +VP
Sbjct: 666 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 725

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ SYS  I + CQ+G   +A +  + M++ GL   V +Y IL
Sbjct: 726 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 768



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 202/406 (49%), Gaps = 17/406 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y   +D + K+   ++A+   ++M   G+ P    +  L+  + +K    +   +F   
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E D+ ++ IL  G C++G + + F++L+++ + G  PN + Y   I G C+ G++
Sbjct: 579 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 638

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A++LF  + E G+   +  Y+ ++CG   +G     +  + ++   G     ++ + L
Sbjct: 639 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 698

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I++ C  G V     +   M   +V  +V++Y+ LI   C+   + +A      M   G+
Sbjct: 699 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 758

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK----AGNSK 402
           S +VI Y  L++G+C AG   +A +LF Q+ + G  P V+ Y VL+    K     G   
Sbjct: 759 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 818

Query: 403 MASD------------LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +A +            L+  M++  I P    YT+LID   +++ + +A E++  M + G
Sbjct: 819 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 878

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +PD Y Y  LI+G C +G + +A  L   M +  +EP+++ ++++
Sbjct: 879 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 75/155 (48%)

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ PS  T+ +L+     + + E     Y+ M+    +PDVYT+ ++   L     + EA
Sbjct: 302 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 361

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +++  M E  ++P+   Y+  + G C  G    A  +L E+N + +     +Y+  +  
Sbjct: 362 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 421

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC++ +  EAE LL    + G  P V  Y+ L R+
Sbjct: 422 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRS 456


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 236/463 (50%), Gaps = 7/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y S+I A+ ++R  + A+    +ML  G++     F S++     + + +    +F + 
Sbjct: 54  IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 113

Query: 168 RCKVELDVYSFGI----LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           + +   ++   GI    +++  C+AG++     +L Q+EE GF  N+ +YT++++G  + 
Sbjct: 114 KAE---NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI 170

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            D E+    F ++   GL  T  TY  ++    K G      +  E+M  +GVSP+   Y
Sbjct: 171 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIY 230

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             ++  Y   G  +  FK++++M    +  ++V YN L+   CK  R+ +A  +L+ ++ 
Sbjct: 231 AMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEA 290

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             + P + TY  ++DG+   G   KA  +F+++K+ G  P VV+YN L+   +KA   + 
Sbjct: 291 NRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMEN 350

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  ++ EM   G+ P+E +YT L + + R+ D+EKAF M+  M+K   + D+  YG L+ 
Sbjct: 351 ARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLK 410

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
             C  G M+ A+++F  + +  L+ N + Y  M+ G+ ++G   +A  LL +M + G   
Sbjct: 411 ACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHL 470

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   Y+S I    + G   E    L  M +  L+ +   Y  L
Sbjct: 471 DTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 513



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 210/424 (49%), Gaps = 1/424 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N V    +Y SI+ A+ ++   +       QM + G +     + ++L    +    +
Sbjct: 115 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 174

Query: 159 KGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K   FF     C +     ++G ++K   +AG++ KA ++L ++++ G SPN +IY  ++
Sbjct: 175 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 234

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG  + GD   A  ++  +   GL      Y +L+    K G         E ++ N + 
Sbjct: 235 DGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLL 294

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TY  ++  Y   G + +  ++FD ++   +   VV+YN+L+ GL K  +++ A  +
Sbjct: 295 PTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLM 354

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L++M   G+ PN  +Y  L +G+  AG+ +KAF +F ++K    +  +V Y  L++A  K
Sbjct: 355 LNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK 414

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           +G  + A+++ +++ + G+  + +TY  ++D + R  ++ KA ++ + MQK GF  D   
Sbjct: 415 SGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTIC 474

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y   I      G+ +E ++    M E KLE N   Y  +I G+    +  +A+    +  
Sbjct: 475 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 534

Query: 518 EKGL 521
             GL
Sbjct: 535 ASGL 538



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 36/394 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY ++++   + R  ++ L +FH++   G+ P + T+  ++    K+ +  K      E 
Sbjct: 159 LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM 218

Query: 167 -------NR----------------------------CKVELDVYSFGILIKGCCEAGDL 191
                  N+                              ++ D+  + IL+   C+AG +
Sbjct: 219 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 278

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +KA  VL  +E     P +  YTS++DG  K G+I++A  +F +I   GL     +Y  L
Sbjct: 279 DKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSL 338

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + GL K    ++      +M  NGV P+  +Y  L   Y   G V + F +F  M+   +
Sbjct: 339 LSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENL 398

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           A ++V Y  L+   CK   +Q A  +  Q+  AG+  N ITY  ++DG+   GE  KA  
Sbjct: 399 AIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARD 458

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L N ++ +G     + Y   I+A  ++G+++  ++ +  M E+ +  +  TYT LI  ++
Sbjct: 459 LLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWL 518

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            + D ++A   Y   + SG   D      L+ GL
Sbjct: 519 AAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 552



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 132/286 (46%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L  Y  L+  Y   G        F+ MR   +  NV  Y +LI    +   ++ A   
Sbjct: 15  PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            ++M   GI  N   +  +I G+  AG  + A   F + K+    P  + YN +++A+ +
Sbjct: 75  TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AGN +    L+ +MEE G   +   YT +++ F    D EK    +  ++  G SP   T
Sbjct: 135 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 194

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG ++      GNM +A  +   M +  + PN ++Y M++ GY + G+   A ++  +M 
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             GL P+I  Y+  +   C+ G+  +A  +L  +    L P++  Y
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY 300



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 103/257 (40%), Gaps = 35/257 (13%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P +  Y  L+D +   G+   A   F  ++++   P+V  Y  LI A+++A + + A   
Sbjct: 15  PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM  +GI  +E  +  +I  +  + + E A   +   +     P    Y  ++   C 
Sbjct: 75  TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC-------------------------- 501
            GNM+    L   M E   + N  +Y  ++ G+                           
Sbjct: 135 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 194

Query: 502 ---------KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
                    K GN  +AL +L EM++ G+ PN   Y+  +    + G +  A  +   M+
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254

Query: 553 KLGLKPSVSLYNILYRA 569
             GLKP + +YNIL  A
Sbjct: 255 SAGLKPDIVIYNILVHA 271


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 195/382 (51%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  FG ++    +    + A  +  Q+E  G  PN+V    LI+  C  G +  +  +  
Sbjct: 52  IVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLG 111

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           KI +LG      T T L+ GL   G  +    F++K+   G   +  +Y  L++  C  G
Sbjct: 112 KILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 171

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +     K    +       NVV YNT+I GLCK+  V EA     +M   GI PNVITY 
Sbjct: 172 ETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYT 231

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI GFC AG+   AF L N++     +P+V TY +LI A  K G  K A +L+ EM  R
Sbjct: 232 TLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYR 291

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G     VTYT L+D F ++ +++KA  ++  M++ G  P+ YTY  LI GLC  G +K+A
Sbjct: 292 GQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDA 351

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            KLF  +       +   YN+MI G CKEG    AL +  +M + G +PN+ ++   I  
Sbjct: 352 QKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRS 411

Query: 535 LCQDGKWPEAEVLLNQMLKLGL 556
           L +  +  +AE LL++M+  GL
Sbjct: 412 LFKKDENDKAEKLLHEMIAKGL 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 1/401 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D A+  F+ ML     P    F  +L ++ K   +        +   K +E ++ +  IL
Sbjct: 34  DDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G ++ +F VL ++ ++G+ PN +  T+L+ G C  G+++++     K+   G 
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q +Y  L+ GL K G  +   +F   ++ +    ++  YN +I   C +  V+E + 
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYD 213

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            + EM  R +  NV+TY TLI G C   ++  A  LL++M +  I+PNV TY  LID  C
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A  L  ++   GQ   VVTY  L+  F K  N   A+ L  +M+E GI P++ 
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT LID   +   ++ A +++  +   G   DV TY V+I GLC +G + EA  + + M
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM 393

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            +    PN V + ++I    K+  + +A +LL EM  KGL+
Sbjct: 394 EDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 2/299 (0%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M++ G+ P+L T N LI+ +C+ G++S  F +  ++       N +T  TL+ GLC +
Sbjct: 76  KQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLK 135

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             VQ++    D++   G   N ++Y  L++G C  GET  A +    ++ +    +VV Y
Sbjct: 136 GEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMY 195

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N +I    K      A D   EM  RGI P+ +TYT LI  F  +  +  AF + + M  
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMIL 255

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSY 507
              +P+VYTY +LI  LC +G +KEA  L   M   + +P DVV Y  ++ G+CK  N  
Sbjct: 256 KNINPNVYTYAILIDALCKEGKVKEAKNLLAEM-HYRGQPADVVTYTSLLDGFCKNQNLD 314

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  L  +M E G+ PN  +Y++ I  LC+ G+  +A+ L   +L  G    V  YN++
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVM 373



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K++  D+A   F +M + G++P   T+ +L+  + K          F +  
Sbjct: 300 YTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLL 359

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   +DV ++ ++I G C+ G L++A  + +++E+ G  PNVV +  +I    K  + +
Sbjct: 360 VKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDEND 419

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L  ++   GL+
Sbjct: 420 KAEKLLHEMIAKGLL 434


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 1/398 (0%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +F    R  V  D  SF  L+  CC  G + +   +L  +   GFS +    T ++   C
Sbjct: 168 VFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 227

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G  +     FR++ E G       YT  I GL K    K  F   E+M   G+ P++Y
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 287

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           T+  LI   C  G     F+LF ++ +      NV TY  +I G C+E ++  AE LL +
Sbjct: 288 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 347

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G+ PN  TY  LI G C  G  D+AF L N++K  G  P++ TYN +I  F K G 
Sbjct: 348 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 407

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  ++R    +G+   ++TYTILI    +   +  A +++  M ++G  PD+  Y  
Sbjct: 408 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 467

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI   C +  M+E+ K F+      L P    Y  MI GYCK G S  ALR+   M + G
Sbjct: 468 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
              +  +Y + I  LC++ +  EA+ L   ML   L P
Sbjct: 528 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 184/379 (48%), Gaps = 36/379 (9%)

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E G    A +V + +   G  P+   + +L+  CC+ G +E    L   +   G      
Sbjct: 158 ETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNA 217

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T TV++  L + G  KD  EF+ +M   G  P                            
Sbjct: 218 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPP---------------------------- 249

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  NVV Y   I GLCK   V++A  +L++M   G+ PNV T+  LIDG C  G T
Sbjct: 250 -------NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 302

Query: 367 DKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           ++AFRLF +L KS+   P+V TY V+I  + + G    A  L+  M E+G+ P+  TYT 
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI    +    ++AFE+ + M++ GF P++YTY  +I G C KG ++EA K+        
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L+ + + Y ++I  +CK+G+   AL L   M E G  P+I +Y+S I   CQ  +  E++
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 482

Query: 546 VLLNQMLKLGLKPSVSLYN 564
              ++ L +GL P+   Y 
Sbjct: 483 KFFDKCLMIGLLPTKQTYT 501



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 200/434 (46%), Gaps = 37/434 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCE 187
           F  M  +GV P   +F +L++   +    ++   L  +  R    LD  +  ++++  CE
Sbjct: 169 FDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 228

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G      E   ++ E G  PNVV YT+ IDG CK   +++A  +  ++   GL    +T
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288

Query: 248 YTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +T LI GL K G  +  F  + K+ + +   P+++TY  +I  YC EGK++    L   M
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + +  N  TY TLI G CK      A  L+++MK  G  PN+ TYN +IDGFC  G+ 
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A+++     S G     +TY +LI    K G+   A DL   M E G  P    YT L
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468

Query: 427 IDSFVRSDDMEK-----------------------------------AFEMYSLMQKSGF 451
           I ++ +   ME+                                   A  ++  M ++G 
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             D  TYG LI GLC +  ++EA  L+  M + +L P +V    + F YC+   +  A+ 
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 588

Query: 512 LLGEMNEKGLVPNI 525
           +L  ++++  V  +
Sbjct: 589 VLDRLDKRQQVHTV 602



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 9/413 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y + ID   K R   QA     +M+  G++P   T  +L+  + K    ++ +  F +  
Sbjct: 254 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 313

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                + +V+++ ++I G C  G L +A  +L ++ E G  PN   YT+LI G CK G  
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 373

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +RA  L  K+ + G +   +TY  +I G  K G  ++ ++        G+     TY  L
Sbjct: 374 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I E+C +G ++    LFD M       ++  Y +LI   C++ +++E+++  D+  M G+
Sbjct: 434 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P   TY  +I G+C  G +  A R+F ++  NG     +TY  LI    K    + A  
Sbjct: 494 LPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKA 553

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M ++ + P EVT   L   + R +    A  +   + K      V+T  V++  L 
Sbjct: 554 LYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLS 610

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
             G++  AS     + +     +   Y   I   C E N Y    L  EM+EK
Sbjct: 611 ALGDVDAASLFLKKVLDEDYAVDHATYTGFI-NSCYENNRY---ALASEMSEK 659



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 1/298 (0%)

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+ +G+   + T N ++      G      K+FD M    V  +  ++  L+   C+E 
Sbjct: 136 EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREG 195

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +V+E + LL  M   G S +  T   ++   C+ G        F ++   G  P+VV Y 
Sbjct: 196 KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 255

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY-SLMQK 448
             I    K    K A  ++ EM  RG+ P+  T+T LID   +    E+AF ++  L++ 
Sbjct: 256 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 315

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           S + P+V+TY V+I G C +G +  A  L   M E  L+PN   Y  +I G+CK G+  R
Sbjct: 316 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 375

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L+ +M ++G +PNI +Y++ I   C+ GK  EA  +L      GLK     Y IL
Sbjct: 376 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 36/247 (14%)

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           ++  F +AG   +A  +  +++S+G    V T N ++R   + G+   A  +   M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P E ++  L+    R   +E+   + + M + GFS D  T  V++  LC KG  K+ S
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-------------- 521
           + F  M ET   PN V Y   I G CK     +A  +L EM  +GL              
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 522 ----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
                                  PN+ +Y+  IG  C++GK   AE+LL +M++ GLKP+
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 560 VSLYNIL 566
            + Y  L
Sbjct: 357 TNTYTTL 363


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 234/464 (50%), Gaps = 12/464 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------L 162
           Y S+I+ ++K  L   A     +M+     P   T+  LL       SF  GW      L
Sbjct: 167 YSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILL-----DGSFKAGWQDIALDL 221

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           +    +  ++ +V+     +     +G + +A E++ ++   G  P++V YT+L+DG  K
Sbjct: 222 YSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLK 281

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           +G +  A  L +++    +V    T+ VLI  LFK G + D    Y  M+  G+SP L T
Sbjct: 282 SGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KSDTESIYSAMREMGLSPDLAT 340

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN +++    +G  +   +L++EM+ R++  N +T N +I GLC+  R++ A  +L +M 
Sbjct: 341 YNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMV 400

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           + G+ P   TY  L++    +   D   +    L +         YN+LI    K G ++
Sbjct: 401 LMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTR 460

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A+ ++++MEERGI     TY  LI  +  S  +++AF  YS M     SPD+ TY +L+
Sbjct: 461 KATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLL 520

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            GL   G + EA  L + + +  L PN   Y  ++ G+CK  N+   LR+  EM  KG +
Sbjct: 521 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 580

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           P   +Y+  IG   + GK  +A+ L+N+M   G+ P+ + Y+IL
Sbjct: 581 PKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDIL 624



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 228/499 (45%), Gaps = 47/499 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG------WL 162
           Y  ++DA  K+    +AL     M+      R N F+ +   V+    F  G      +L
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMI-----VRGNNFDVIACTVLIDGLFKSGQIKEAEYL 116

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F +  +  +  +  ++  LI G C+ GD+N A   L+++EE    PNV+ Y+SLI+G  K
Sbjct: 117 FCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVK 176

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS----- 277
            G +  A  + RK+     +    TY +L+ G FK G Q    + Y KM+  G+      
Sbjct: 177 QGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFI 236

Query: 278 ------------------------------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                                         P L  Y  L+  +   GKVS    L  EM 
Sbjct: 237 LDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMT 296

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V  ++VT+N LI  L K +   + E +   M+  G+SP++ TYN +++G    G   
Sbjct: 297 SKNVVFDIVTFNVLINCLFK-LGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 355

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            A  L+N++KS    P+ +T N++I    +AG  + A D+++EM   G+ P+  TY IL+
Sbjct: 356 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 415

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +   +S   +   + + L+       D   Y +LI  LC  G  ++A+ +   M E  + 
Sbjct: 416 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 475

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            +   YN +I GYC   +  RA      M  + + P+I +Y+  +G L + G   EA+ L
Sbjct: 476 ADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDL 535

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+++ K GL P+   Y  L
Sbjct: 536 LSEIKKRGLVPNACTYETL 554



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 12/450 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           ++AL  + +M+ SG+ P   TF S+L  + K     +G L   E  +  + L+  S+ IL
Sbjct: 6   EEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTIL 65

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +    +AG + +A   L  +   G + +V+  T LIDG  K+G I+ A+ LF  + +L L
Sbjct: 66  LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 125

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    TY+ LI G  K G          +M+     P++ TY+ LI+ Y  +G + + FK
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFK 185

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +  +M H+    N+ TY  L+ G  K      A  L  +MK  G+  NV   +  ++   
Sbjct: 186 VLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMK 245

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G  ++A  L  ++ S G  P +V Y  L+  F K+G    A +L +EM  + +    V
Sbjct: 246 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 305

Query: 422 TYTILIDSFVR--SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           T+ +LI+   +    D E    +YS M++ G SPD+ TY  +++G   KGN   A +L+N
Sbjct: 306 TFNVLINCLFKLGKSDTE---SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWN 362

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M   KL PN +  N+MI G C+ G    A+ +L EM   GL P   +Y   + +     
Sbjct: 363 EMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNI---SS 419

Query: 540 KWPEAEVLLNQ---MLKLGLKPSVSLYNIL 566
           K   A+ +L     ++ + LK    +YNIL
Sbjct: 420 KSRRADTILQTHELLVNMQLKVDKDVYNIL 449



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 18/459 (3%)

Query: 112 IIDAHL----KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           I+DA +    +S   ++A     +M   G++P    + +L+   +KS           E 
Sbjct: 236 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 295

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K V  D+ +F +LI    + G  +    + + + EMG SP++  Y ++++G  K G+ 
Sbjct: 296 TSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNW 354

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L+ ++    L+    T  ++I GL + G  ++  +  ++M L G+ P+  TY  L
Sbjct: 355 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 414

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++      +     +  + + + ++  +   YN LI  LCK    ++A  +L  M+  GI
Sbjct: 415 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI 474

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +  TYN LI G+C +    +AF  ++ + S   SP + TYN+L+   SKAG    A D
Sbjct: 475 IADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADD 534

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ E+++RG+ P+  TY  L+    +  + ++   +Y  M   GF P    Y +LI    
Sbjct: 535 LLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFS 594

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN----------SYR--ALRLLG 514
             G MK+A +L N M    + P    Y+++I G+C              SYR  A RL  
Sbjct: 595 KMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFI 654

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           EMN++G VP  ++ +         GK  +A +LL    K
Sbjct: 655 EMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYK 693



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 14/403 (3%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +S N V     +  +I+   K   SD    Y   M + G+ P   T+N++L    K  ++
Sbjct: 296 TSKNVVFDIVTFNVLINCLFKLGKSDTESIY-SAMREMGLSPDLATYNTMLNGNFKKGNW 354

Query: 158 DKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
                 ++E +  K+  +  +  I+I G CEAG +  A ++L ++  MG  P    Y  L
Sbjct: 355 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 414

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++   K+   +        +  + L   +  Y +LI  L K G+ +      + M+  G+
Sbjct: 415 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI 474

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
                TYN LIH YC    +   F  +  M    V+ ++ TYN L+ GL K   + EA+ 
Sbjct: 475 IADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADD 534

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL ++K  G+ PN  TY  L+ G C    T +  R++ ++   G  P    YN+LI  FS
Sbjct: 535 LLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFS 594

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILI------------DSFVRSDDMEKAFEMYS 444
           K G  K A +L+ EM+ +G++P+  TY ILI             S ++     +A  ++ 
Sbjct: 595 KMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFI 654

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            M   GF P   T   +       G   +A  L  S ++ K E
Sbjct: 655 EMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRKRE 697



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           AL L  EM   G+ P++ ++ S +  LC+ GK  E ++LL +M K+G+  +   Y IL  
Sbjct: 8   ALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLD 67

Query: 569 A 569
           A
Sbjct: 68  A 68


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 230/465 (49%), Gaps = 2/465 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + SI+    K R  D+AL  F +++     P S+T+N ++  +      ++ +    E  
Sbjct: 223 FNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 281

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++ +  I++   C+A  L +A+++     + G +P+ V Y SLIDG  K G ++
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 341

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ + G  A    YT LI   F +G ++DG + ++++   G  P L   N  +
Sbjct: 342 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYM 401

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+V +G  +F+++R      +V +Y+ LI GL K  + +E   +   MK  G +
Sbjct: 402 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +   YN ++DGFC +G+  KA+ +  ++K     P+V TY  ++   +K      A  L
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E + +GI  + V Y+ LID F +   +++A+ +   M K G +P+VYT+  L+  L  
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 581

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA   F SM E K  PN   Y+++I G C+     +A     +M ++GLVPN+ +
Sbjct: 582 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           Y++ I  L + G   +A  L  +    G  P  + +N L    +N
Sbjct: 642 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 236/493 (47%), Gaps = 35/493 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A  ++R  ++AL    QM + G     + F +L+  + +            E +
Sbjct: 48  YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 107

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D+  + + I    +AG+++ A +  ++L+  G  P+ V YTS+I   CK G + 
Sbjct: 108 GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 167

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY------ 281
            A+ LF ++     V   + Y  +I G    G  +D ++  E+++  G  PS+       
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 227

Query: 282 ----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                                       TYN +I   C  G+V E +++ DEM H  +  
Sbjct: 228 TCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 287

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N++T N ++  LCK  +++EA ++ +     G +P+ +TY  LIDG    G+ D+A+RLF
Sbjct: 288 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 347

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++   G + + V Y  LIR F   G  +    + +E+  RG  P        +D   ++
Sbjct: 348 EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKA 407

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++EK   ++  ++  GF PDV +Y +LIHGL   G  +E S +F++M +     +   Y
Sbjct: 408 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 467

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N ++ G+CK G  ++A  +L EM EK + P +A+Y + +  L +  +  EA +L  +   
Sbjct: 468 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 527

Query: 554 LGLKPSVSLYNIL 566
            G++ +V LY+ L
Sbjct: 528 KGIELNVVLYSSL 540



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 191/400 (47%), Gaps = 4/400 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           ++D   K+R  ++A   F      G  P   T+ SL+  + K    D+ +  F +     
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
              +   +  LI+     G      +V  +L   G  P++ +  + +D   K G++E+ +
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 414

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
           M+F  I   G +    +Y++LI GL K G  ++    +  M+  G +     YN ++  +
Sbjct: 415 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  GKV + +++ +EM+ + V   V TY  ++ GL K  R+ EA  L ++ K  GI  NV
Sbjct: 475 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 534

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + Y+ LIDGF   G  D+A+ +  ++   G +P+V T+N L+ A  KA     A    + 
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+E    P+  TY+ILI+   R     KAF  +  MQK G  P+V TY  +I GL   GN
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 654

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           + +A  LF         P+   +N +I G     N+ RA+
Sbjct: 655 ITDAYSLFERFKANGGIPDAASFNALIEGM---SNANRAM 691



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 8/399 (2%)

Query: 173 LDVYSFGILIKGCCE-------AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           + V  +G+  + C +       A  L+ A   +  +  + F P    YT LI    +   
Sbjct: 1   MAVLGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 60

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            ERA  L R++ E+G     H +T L+  L + G   D     ++++ + + P +  YN 
Sbjct: 61  PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 120

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            I  +   G V    K F E++ + +  + V+Y ++I  LCK  R+ EAE L  QM+   
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P    YN +I G+  AG  + A++L  +L+  G  PSVV++N ++    K      A 
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L  E+ ++   P+  TY I+ID       +E+A+ +   M+ +   P++ T  +++  L
Sbjct: 241 SLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    ++EA K+F S  +    P+ V Y  +I G  K+G    A RL  +M + G   N 
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
             Y+S I      G+  +   +  ++++ G KP ++L N
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLN 398



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 167/344 (48%), Gaps = 5/344 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++NPV    +Y S+I         +     F +++  G +P     N+ +  V K+   +
Sbjct: 356 NANPV----VYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 411

Query: 159 KGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           KG + F + R    L DV S+ ILI G  +AG   +   + + +++ GF+ +   Y +++
Sbjct: 412 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK+G + +A  +  ++ E  +  T  TY  ++ GL K     + +  +E+ +  G+ 
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            ++  Y+ LI  +   G++ E + + +EM  + +  NV T+N+L+  L K   + EA   
Sbjct: 532 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 591

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              MK     PN  TY+ LI+G C   + +KAF  +  ++  G  P+VVTY  +I   +K
Sbjct: 592 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            GN   A  L    +  G  P   ++  LI+    ++   +A++
Sbjct: 652 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           L   L +  R+ +A   +  M+     P    Y  LI    +A   ++A  L  Q++  G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
               V  +  L+RA ++ G    A  LV E++   + P  V Y + ID F ++ +++ A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           + +  ++  G  PD  +Y  +I  LC  G + EA +LF  M   +  P    YN MI GY
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G    A +LL  + E+G +P++ S++S +  L +  K  EA  L  +++K   +P+ 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 254

Query: 561 SLYNIL 566
           S YNI+
Sbjct: 255 STYNII 260


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 191/375 (50%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  V +Q+   G +P+    T+L+    +      A+ +F ++   GL  + H Y  +
Sbjct: 131 HDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAM 190

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K G          +M   GV    ++YN +I  YC +G   E   + D M    +
Sbjct: 191 LHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGI 250

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             + VT+N+LI GLCK  RV+EA +L  +M  A  +P+ +TY  LIDG+C AG  ++A +
Sbjct: 251 RADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVK 310

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++++ G  P V TYN ++R   + G  K  + L+ EM+ER +    VT   LI+++ 
Sbjct: 311 LRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYC 370

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +   M  A ++   M +SG   + +TY  LIHG C    + EA + F  M +    PN  
Sbjct: 371 KRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYS 430

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           V++ ++ G+CK+ N+   L +  E+ ++GL P+ A Y S I  LC+ G   +A+ + +QM
Sbjct: 431 VFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQM 490

Query: 552 LKLGLKPSVSLYNIL 566
              GL     +Y  L
Sbjct: 491 QSKGLVGDSLVYATL 505



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 207/429 (48%), Gaps = 3/429 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEV 197
           PR  ++  L++ + +S         F + R + +  D ++   L+     A     A  V
Sbjct: 114 PRVPSW--LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRV 171

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
            +++   G + +  +Y +++  C K GD  RA+ L  ++   G+   + +Y  +I    K
Sbjct: 172 FDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCK 231

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G++ +     ++M   G+     T+N LIH  C  G+V E  +LF EM   +   + VT
Sbjct: 232 KGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVT 291

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y TLI G C+   ++EA +L  +M+  G+ P V TYN ++   C+ G+  +  +L N++ 
Sbjct: 292 YTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMD 351

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
                   VT N LI A+ K G+   A  + ++M E G+  ++ TY  LI  F ++ +++
Sbjct: 352 ERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELD 411

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A E +  M  +GFSP+   +  L+ G C K N      + + + +  L P+  VY  +I
Sbjct: 412 EAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLI 471

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              C++G   +A ++  +M  KGLV +   Y++       +GK   A   L+ M K  L 
Sbjct: 472 RRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLY 531

Query: 558 PSVSLYNIL 566
            +  +YN L
Sbjct: 532 ITPQIYNCL 540



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 3/413 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRC 169
           +++ A  ++R++  A   F +M  +G+   ++ +N++L   +K+    +     +  +  
Sbjct: 154 ALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAA 213

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V LD +S+  +I   C+ G   +A  V +++++ G   + V + SLI G CK G ++ A
Sbjct: 214 GVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEA 273

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++          TYT LI G  + G  ++  +   +M+  G+ P + TYN ++ +
Sbjct: 274 AQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRK 333

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C +GK+ E  +L +EM  R+V  + VT NTLI   CK   +  A ++  +M  +G+  N
Sbjct: 334 LCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLN 393

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             TY  LI GFC A E D+A   F Q+   G SP+   ++ L+  F K  N+     +  
Sbjct: 394 QFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPD 453

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E+ +RG+ P +  Y  LI    R   +++A +++  MQ  G   D   Y  L +    +G
Sbjct: 454 ELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEG 513

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
               AS   + M + +L     +YN +   Y  E  +   L +     E+GL+
Sbjct: 514 KPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKETLNILWV--RAIERGLI 564



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 3/327 (0%)

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+  L ++    D    +++M+  G++P  +    L+         +   ++FDEM    
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +A +   YN ++    K      AE L+ +M  AG+  +  +YN +I  +C  G   +A 
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAM 239

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            + +++   G     VT+N LI    K G  K A+ L  EM     TP  VTYT LID +
Sbjct: 240 CVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGY 299

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            R+ ++E+A ++   M+ +G  P V TY  ++  LC  G MKE ++L N M E K++ + 
Sbjct: 300 CRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADH 359

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           V  N +I  YCK G+   A ++  +M E GL  N  +Y + I   C+  +  EA+    Q
Sbjct: 360 VTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQ 419

Query: 551 MLKLGLKPSVSLYNIL---YRAKNNIE 574
           M+  G  P+ S+++ L   +  KNN +
Sbjct: 420 MVDAGFSPNYSVFSWLVDGFCKKNNAD 446


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 228/477 (47%), Gaps = 36/477 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  M   G+ P +  F SL+     +           E + + +E+ V ++ ILI G  +
Sbjct: 274 FENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGK 333

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             D   A  +  + +    + N +IY+++I   C++G+++RA+ L R++ E G+ A    
Sbjct: 334 TNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDV 393

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  ++ G      +K     +E+++  G  P++ +Y CLI+ Y   GKV +   +  EM 
Sbjct: 394 YHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME 453

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N  TY+ LI G         A  + + M  +G+ P+   YN L++ FC  G  D
Sbjct: 454 SHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 513

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD--------------------- 406
           +A R+F +++     PS  T+  +I  F+ AG+ K A D                     
Sbjct: 514 RAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALI 573

Query: 407 --LVRE------------MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             LVR+            M   GI P+E TYTI++  +  S D+ KAFE ++ +++SG  
Sbjct: 574 HGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 633

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            DVY Y  L+   C  G M+ A  +   M   K+  N  +YN++I G+ + G+ + A  L
Sbjct: 634 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 693

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L +M E G+ PNI +++S I   C+ G    AE ++ +M  +GLKP+V  +  L + 
Sbjct: 694 LKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKG 750



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 207/422 (49%), Gaps = 1/422 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH +S   D+A     +M + G+    + ++S++          K  + F   
Sbjct: 358 IYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERL 417

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C  +  + S+G LI    + G + KA  +  ++E  G   N   Y+ LI+G     D 
Sbjct: 418 KECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDF 477

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + GL   +  Y +L+    K G        +E+MQ   + PS  T+  +
Sbjct: 478 ANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPI 537

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +   G +   F   D MR    A  V+TYN LI GL ++ +V++A  +LD+M +AGI
Sbjct: 538 IEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGI 597

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++T+   I+  C
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACC 717

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A  +   M +  L+PN   +  +I G+ +     RAL+   EM   GL P+ A
Sbjct: 718 KAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEA 777

Query: 527 SY 528
           +Y
Sbjct: 778 AY 779



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 7/376 (1%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AFE + +     F   VV Y        K GD   A+  F  +   G+      +T L+ 
Sbjct: 242 AFERIPKPSRREFGLMVVYY-------AKRGDKHHARATFENMRARGIEPNAFVFTSLVH 294

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                G  +      E+M+  G+  ++ TY+ LI  Y           LF E + +    
Sbjct: 295 AYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNL 354

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N + Y+ +I   C+   +  AE L+ +M+  GI   +  Y+ ++ G+    +  K   +F
Sbjct: 355 NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVF 414

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +LK  G  P++++Y  LI  + K G    A  + +EME  GI  +  TY++LI+ F+  
Sbjct: 415 ERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHL 474

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D   AF ++  M KSG  PD   Y +L+   C  GNM  A ++F  M + +++P++  +
Sbjct: 475 HDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTF 534

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I G+   G+  RA   L  M   G  P + +Y++ I  L +  +  +A  +L++M  
Sbjct: 535 RPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSI 594

Query: 554 LGLKPSVSLYNILYRA 569
            G+ P+   Y I+ R 
Sbjct: 595 AGIAPNEHTYTIIMRG 610



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 192/429 (44%), Gaps = 45/429 (10%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++    + GD + A      +   G  PN  ++TSL+      GD+  A     ++ 
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----LNGVSPSLYTYNCLIHEYCN 292
             G+  T  TY++LI G  K    +     +++ +     LNG+      Y+ +IH +C 
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGI-----IYSNIIHAHCQ 368

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLI---------------------CGL------ 325
            G +    +L  EM    +   +  Y++++                     CG       
Sbjct: 369 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIIS 428

Query: 326 --------CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
                    K  +V +A  +  +M+  GI  N  TY+ LI+GF    +   AF +F  + 
Sbjct: 429 YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            +G  P    YN+L+ AF K GN   A  +   M++  + PS  T+  +I+ F  + DM+
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMK 548

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +AF+   LM++SG +P V TY  LIHGL  K  +++A  + + M    + PN+  Y +++
Sbjct: 549 RAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIM 608

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY   G+  +A     ++ E GL  ++  Y + +   C+ G+   A  +  +M    + 
Sbjct: 609 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 668

Query: 558 PSVSLYNIL 566
            +  +YNIL
Sbjct: 669 RNTFIYNIL 677



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +A+    +M   G++  + T++ L+   I    F   +  F +  
Sbjct: 429 YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ D   + +L++  C+ G++++A  +  ++++    P+   +  +I+G    GD++
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMK 548

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA      +   G   T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 549 RAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIM 608

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 609 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 668

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ T+   I A  KAG+ + A ++
Sbjct: 669 RNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENV 728

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++EM + G+ P+  T+T LI  + R    ++A + +  M+ +G  PD   Y  L+  L  
Sbjct: 729 IQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLS 788

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 789 RATVMEGS 796


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 266/574 (46%), Gaps = 28/574 (4%)

Query: 21  AKLPPLKAFSLFNWASRQGLQ-----------------HTPQSISIILRLLLSKMSSHSH 63
           A+ P L   +LF    R GL+                  T ++++++L  + S++    +
Sbjct: 170 ARRPDL-GLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRM-SELGCVPN 227

Query: 64  AAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL-YESIIDAHLKSRLS 122
           A + +++LK +      +S + R+L   L Q+        +   + Y ++I        +
Sbjct: 228 AVSYSIVLKALC----DNSMSQRAL--DLLQMMAKQGGACSPDVVAYSTVIHGFFNEGET 281

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
            +A   FH+M   GV+P   T+N ++  + K+ + DK  L   +      + D  ++  +
Sbjct: 282 GKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCM 341

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G    G L +A ++  ++++ G  PN+V   S +   CK+G  + A   F  +   G 
Sbjct: 342 IHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH 401

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +Y  L+ G    G   D    +  M+ NG++ + + +  LIH Y   G V +   
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F EM+ + V+ +VVTY+T+I    +  R+ +A    +QM   GI PN   Y+ +I GFC
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521

Query: 362 DAGETDKAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
             G   KA  L +++ + G   P +V ++ +I +  K G    A D+     + G  P  
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGV 581

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +T+  LID +     M+KAF++   M+  G  PD+ TY  L+ G    G + +   LF  
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFRE 641

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    ++PN V Y +M+ G  + G +  A +   EM E G    ++ Y   +G LC++  
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             EA +L  ++  + +K S+++ N +  A   ++
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 227/463 (49%), Gaps = 5/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSE 166
           Y  ++D   ++R  D  L  F  +L +G++    T N+LL  +  +   ++    L    
Sbjct: 160 YNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRM 219

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNG 224
           +      +  S+ I++K  C+     +A ++L  + + G   SP+VV Y+++I G    G
Sbjct: 220 SELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEG 279

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +  +A  LF ++   G+     TY ++I  L K            +M  +G  P   TY+
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYS 339

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           C+IH Y   G++ E  K+F EM+ R +  N+VT N+ +  LCK  R +EA    D M   
Sbjct: 340 CMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK 399

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P++ +Y  L+ G+   G       LFN +KSNG + +   + +LI A++K G    A
Sbjct: 400 GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDA 459

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             +  EM+++G++P  VTY+ +I +F R   +  A E ++ M   G  P+   Y  +I G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQG 519

Query: 465 LCMKGNMKEASKLFNSMWETKL-EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            CM G + +A +L + M    +  P+ V ++ +I   CK+G    A  +     + G  P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERP 579

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +++S I   C  GK  +A  +L+ M  +G++P +  YN L
Sbjct: 580 GVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL 622



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 74/433 (17%)

Query: 208 PNVVIYTSLIDGCCK------------------------------------NGDIERAKM 231
           P    Y  L+D CC+                                    N   E   +
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHE 289
           L  ++ ELG V    +Y++++  L  N + +   +  + M   G   SP +  Y+ +IH 
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           + NEG+  +   LF EM  + V  +VVTYN +I  LCK   + +AE +L QM   G  P+
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +TY+ +I G+   G   +A ++F ++K  G  P++VT N  + +  K G SK A++   
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 410 EMEERGITPSEVTY-----------------------------------TILIDSFVRSD 434
            M  +G  P   +Y                                   TILI ++ +  
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            ++ A  +++ MQ+ G SPDV TY  +I      G + +A + FN M    ++PN  VY+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            +I G+C  G   +A  L+ EM  KG+  P+I  +SS I  LC+DG+  +A  + +    
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATD 574

Query: 554 LGLKPSVSLYNIL 566
           +G +P V  +N L
Sbjct: 575 IGERPGVITFNSL 587



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 208/422 (49%), Gaps = 2/422 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F+ M  +G+    + F  L+    K    D   L F+E + + V  DV ++  +I     
Sbjct: 428 FNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR 487

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L  A E  NQ+   G  PN  +Y+S+I G C +G + +AK L  ++   G+      
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           + + +I  L K+G   D  + ++     G  P + T+N LI  YC  GK+ + FK+ D M
Sbjct: 548 FFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               V  ++VTYNTL+ G  K  R+ +   L  +M+  G+ PN +TY  ++ G   AG T
Sbjct: 608 EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A + F+++  +G + +V  Y +++    +   +  A  L +++    +  S      +
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I++  +    E+A E+++ +  SG  P+  TYGV+I  L   G +++A+ +F+SM ++ +
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGI 787

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P   + N +I    ++G   +A   L +++ K ++   ++ S  + +  + GK+ E   
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIK 847

Query: 547 LL 548
           LL
Sbjct: 848 LL 849



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 245/539 (45%), Gaps = 18/539 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIIL------------RLLLSKMSSHSHAAAQTLILKII 74
           KA SLF+  +RQG++    + ++I+             L+L +M++            +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
            G  T       + +    +      N VT +    S+     K   S +A  +F  M  
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC----KHGRSKEAAEFFDSMTA 398

Query: 135 SGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNK 193
            G +P   ++ +LL  +  + C  D   LF S     +  + + F ILI    + G ++ 
Sbjct: 399 KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  ++++ G SP+VV Y+++I    + G +  A   F ++   G+      Y+ +I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           G   +G      E   +M   G+  P +  ++ +I+  C +G+V +   +FD        
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGER 578

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             V+T+N+LI G C   ++ +A ++LD M++ G+ P+++TYN L+DG+   G  +    L
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL 638

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F +++  G  P+ VTY +++    +AG +  A     EM E G T +   Y I++    R
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           ++  ++A  ++  +        +     +I+ +      +EA +LF ++  + L PN+  
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           Y +MI    K+G    A  +   M + G+VP     +  I +L + G+  +A   L+++
Sbjct: 759 YGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 196/408 (48%), Gaps = 2/408 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++  +I A+ K  + D A+  F +M   GV P   T+++++    +          F++ 
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGD 225
             + ++ +   +  +I+G C  G L KA E+++++   G   P++V ++S+I+  CK+G 
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  +F    ++G      T+  LI G    G     F+  + M++ GV P + TYN 
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  Y   G++++G  LF EM+ + V  N VTY  ++ GL +  R   A +   +M  +G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +  V  Y  ++ G C     D+A  LF +L +     S+   N +I A  K    + A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L   +   G+ P+E TY ++I + ++   +E A  M+S M+KSG  P       +I  L
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
             KG + +A    + +   ++       ++M+  + ++G     ++LL
Sbjct: 802 LEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 139/295 (47%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA-ER 336
           P+  TYN L+   C   +   G  LF  +    +  + +T NTL+  LC   R +EA   
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVLIRA 394
           LL +M   G  PN ++Y+ ++   CD   + +A  L   +   G   SP VV Y+ +I  
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G +  A  L  EM  +G+ P  VTY ++ID+  ++  M+KA  +   M   G  PD
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             TY  +IHG    G +KEA+K+F  M +  L PN V  N  +   CK G S  A     
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M  KG  P+I SY + +     +G + +   L N M   G+  +  ++ IL  A
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 168/378 (44%), Gaps = 4/378 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           Y ++I    +  RL+D A+  F+QM+  G++P +  ++S++          K     SE 
Sbjct: 478 YSTVISTFSRMGRLTD-AMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N+     D+  F  +I   C+ G +  A ++ +   ++G  P V+ + SLIDG C  G 
Sbjct: 537 INKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGK 596

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +++A  +   +  +G+     TY  L+ G FKNG   DG   + +MQ  GV P+  TY  
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++      G+     K F EM        V  Y  ++ GLC+     EA  L  ++    
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +  ++   N +I+        ++A  LF  + ++G  P+  TY V+I    K G  + A+
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++   ME+ GI P       +I   +   ++ KA    S +       +  T  +++   
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 466 CMKGNMKEASKLFNSMWE 483
             KG  +E  KL  + ++
Sbjct: 837 SRKGKYQEDIKLLPAKYQ 854


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 230/465 (49%), Gaps = 2/465 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           + SI+    K R  D+AL  F +++     P S+T+N ++  +      ++ +    E  
Sbjct: 91  FNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 149

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++ +  I++   C+A  L +A+++     + G +P+ V Y SLIDG  K G ++
Sbjct: 150 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 209

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF K+ + G  A    YT LI   F +G ++DG + ++++   G  P L   N  +
Sbjct: 210 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM 269

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+V +G  +F+++R      +V +Y+ LI GL K  + +E   +   MK  G +
Sbjct: 270 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            +   YN ++DGFC +G+  KA+ +  ++K     P+V TY  ++   +K      A  L
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             E + +GI  + V Y+ LID F +   +++A+ +   M K G +P+VYT+  L+  L  
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 449

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA   F SM E K  PN   Y+++I G C+     +A     +M ++GLVPN+ +
Sbjct: 450 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 509

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           Y++ I  L + G   +A  L  +    G  P  + +N L    +N
Sbjct: 510 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 554



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 210/408 (51%), Gaps = 2/408 (0%)

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
            W FF E + + ++ D  S+  +I   C+AG L +A E+  Q+E     P    Y ++I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G    G  E A  L  ++ E G + +  ++  ++  L K     +    +E M+ +   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  TYN +I   C  G+V E +++ DEM H  +  N++T N ++  LCK  +++EA ++ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           +     G +P+ +TY  LIDG    G+ D+A+RLF ++   G + + V Y  LIR F   
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G  +    + +E+  RG  P        +D   ++ ++EK   ++  ++  GF PDV +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
            +LIHGL   G  +E S +F++M +     +   YN ++ G+CK G  ++A  +L EM E
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           K + P +A+Y + +  L +  +  EA +L  +    G++ +V LY+ L
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 210/458 (45%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  +  +   + A     ++ + G  P   +FNS+L  + K    D+    F   +
Sbjct: 56  YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              E +  ++ I+I   C  G + +A+ +L+++E     PN++    ++D  CK   +E 
Sbjct: 116 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 175

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F    + G      TY  LI GL K G   + +  +EKM   G + +   Y  LI 
Sbjct: 176 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G+  +G K+F E+  R    ++   NT +  + K   V++   + + ++  G  P
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +V +Y+ LI G   AG+  +   +F+ +K  G +     YN ++  F K+G    A +++
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM+E+ + P+  TY  ++D   + D +++A+ ++   +  G   +V  Y  LI G    
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +   M +  L PN   +N ++    K      AL     M E    PN  +Y
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 475

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S  I  LC+  K+ +A V    M K GL P+V  Y  +
Sbjct: 476 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 212/455 (46%), Gaps = 41/455 (9%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++    + P   S  Y  IID        ++A     +M  + + P   T N ++  +
Sbjct: 110 LFEVMKKDAEP--NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 167

Query: 152 IKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K+   ++ + +F S ++     D  ++  LI G  + G +++A+ +  ++ + G + N 
Sbjct: 168 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227

Query: 211 VIYTSLID---------------------GC------------C--KNGDIERAKMLFRK 235
           V+YTSLI                      GC            C  K G++E+ +M+F  
Sbjct: 228 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 287

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           I   G +    +Y++LI GL K G  ++    +  M+  G +     YN ++  +C  GK
Sbjct: 288 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 347

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V + +++ +EM+ + V   V TY  ++ GL K  R+ EA  L ++ K  GI  NV+ Y+ 
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGF   G  D+A+ +  ++   G +P+V T+N L+ A  KA     A    + M+E  
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+  TY+ILI+   R     KAF  +  MQK G  P+V TY  +I GL   GN+ +A 
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            LF         P+   +N +I G     N+ RA+
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGM---SNANRAM 559



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 167/344 (48%), Gaps = 5/344 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           ++NPV    +Y S+I         +     F +++  G +P     N+ +  V K+   +
Sbjct: 224 NANPV----VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 279

Query: 159 KGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           KG + F + R    L DV S+ ILI G  +AG   +   + + +++ GF+ +   Y +++
Sbjct: 280 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 339

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK+G + +A  +  ++ E  +  T  TY  ++ GL K     + +  +E+ +  G+ 
Sbjct: 340 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 399

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            ++  Y+ LI  +   G++ E + + +EM  + +  NV T+N+L+  L K   + EA   
Sbjct: 400 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 459

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              MK     PN  TY+ LI+G C   + +KAF  +  ++  G  P+VVTY  +I   +K
Sbjct: 460 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 519

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            GN   A  L    +  G  P   ++  LI+    ++   +A++
Sbjct: 520 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 117/235 (49%), Gaps = 1/235 (0%)

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A +   ++K  G+ P+ ++Y  +I   C AG   +A  LF Q+++    P    YN +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
            +  AG  + A  L+  + ERG  PS V++  ++    +   +++A  ++ +M+K    P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +  TY ++I  LC+ G ++EA ++ + M    L PN +  N+M+   CK      A ++ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              +++G  P+  +Y S I  L + G+  EA  L  +ML  G   +  +Y  L R
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 1/164 (0%)

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
           MA     E++ +G+ P +V+YT +I    ++  + +A E+++ M+     P  Y Y  +I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G    G  ++A KL   + E    P+ V +N ++    K+     AL L  E+ +K   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           PN ++Y+  I +LC  G+  EA  +L++M    L P++   NI+
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIM 163


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 266/606 (43%), Gaps = 61/606 (10%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P  A+S F      G QH   + + ++R+L            Q+L+ +I+  + +   F 
Sbjct: 77  PNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERK---LQSLLSEIVGSKESVLGFD 133

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLY--ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
             +L   L +         +   +   + ++ A+++  + D+A+    Q    G  P   
Sbjct: 134 ITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIM 193

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           + N L+  +I+    D     +    R  +  + Y++GI IK  C  G+  +A +V  ++
Sbjct: 194 SCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM 253

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           EE G +PN V  ++ I+G C +   +      R +           YT +I G       
Sbjct: 254 EEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKL 313

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK-----------VSEGFKL-----FDE 305
           K+  + +  M   G++P  Y Y  LIH YC  G            VS G K      F E
Sbjct: 314 KEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKE 373

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
            R   +  + V YN ++  LCK  +V+EA  LL++MK   +S +V+ Y  LI G+C  G+
Sbjct: 374 FRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGK 433

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT--- 422
              A  +F ++K  G  P +VTYN+L+  FS+ G  K A +L+  +  +G+ P+  T   
Sbjct: 434 LVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 493

Query: 423 ----------------------------YTILIDSFVRSDDMEKAFEMYSLMQKSGF--- 451
                                       Y+ ++D + +++   KA+E++S + K G    
Sbjct: 494 IIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRM 553

Query: 452 -----SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                 P+   YG LI   C  G+MK A  +F+ + E  + P+ + Y MMI GYC+    
Sbjct: 554 LALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCL 613

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  +  +M E+G+ P++ +Y+  +    +     +A  L ++M+  GL+P +  Y  L
Sbjct: 614 REARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTAL 673

Query: 567 YRAKNN 572
              K N
Sbjct: 674 LPGKCN 679



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 215/444 (48%), Gaps = 62/444 (13%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC----KVELDVYSF 178
           ++A+  F +M ++GV P + T ++   ++   CS  +  L +   R        +D +++
Sbjct: 244 EEAVDVFREMEEAGVNPNAVTCST---YIEGLCSHKRSDLGYEALRALRAANWPIDTFAY 300

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML------ 232
             +I+G C    L +A +V   +   G +P+  IY +LI   CK G++ +A  L      
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360

Query: 233 ----------FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
                     F++  + G+   +  Y +++  L K G  ++  E   +M+   +S  +  
Sbjct: 361 NGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 420

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y  LI  YC +GK+ +   +F+EM+ R +  ++VTYN L+ G  +    +EA  LLD + 
Sbjct: 421 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 480

Query: 343 MAGISPNVITYNKLIDGFCDAGE-------------------------------TDKAFR 371
             G+ PN  T+N++I+G C AG+                               T KA+ 
Sbjct: 481 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYE 540

Query: 372 LFNQLKSNG--------QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           LF++L   G          P+ + Y  LI AF + G+ K A  +   + ERGITP  +TY
Sbjct: 541 LFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITY 600

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T++I+ + R + + +A ++++ M++ G  PDV TY V++ G     N+++A  L++ M  
Sbjct: 601 TMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIA 660

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSY 507
             L+P+ V Y  ++ G C  G+ +
Sbjct: 661 RGLQPDIVTYTALLPGKCNFGSRH 684



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 167/318 (52%), Gaps = 17/318 (5%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD   + I++   C+ G + +A E+LN+++    S +VV YT+LI G C  G +  AK +
Sbjct: 381 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 440

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F ++ E G+     TY +L+ G  +NGL+K+  E  + +   G+ P+  T+N +I   C 
Sbjct: 441 FEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCM 500

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI------ 346
            GKV E     + +   E  C +  Y+ ++ G CK    ++A  L  ++   GI      
Sbjct: 501 AGKVKEAEAFLNTL---EDKC-LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLAL 556

Query: 347 --SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              PN I Y KLI  FC  G+  +A  +F+ L   G +P V+TY ++I  + +    + A
Sbjct: 557 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 616

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            D+  +M+ERGI P  +TYT+++D   ++++++ A  +Y  M   G  PD+ TY  L+ G
Sbjct: 617 RDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676

Query: 465 LCMKGNMKEASKLFNSMW 482
            C  G     S+ F++ W
Sbjct: 677 KCNFG-----SRHFDNQW 689



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 100/269 (37%), Gaps = 67/269 (24%)

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM--EERGITPSEVT 422
           E + A+  F QLK +G   +V TY  LIR   +    +    L+ E+   +  +   ++T
Sbjct: 76  EPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDIT 135

Query: 423 ------------------------YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV--- 455
                                     +L+ ++VR    ++A +     ++ GF P +   
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSC 195

Query: 456 --------------------------------YTYGVLIHGLCMKGNMKEASKLFNSMWE 483
                                           YTYG+ I  LC KGN +EA  +F  M E
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEE 255

Query: 484 TKLEPNDVVYNMMIFGYCKEGNS---YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
             + PN V  +  I G C    S   Y ALR L   N      +  +Y++ I   C + K
Sbjct: 256 AGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWP---IDTFAYTAVIRGFCSEMK 312

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EAE +   M+  G+ P   +Y  L  A
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHA 341


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 219/432 (50%), Gaps = 2/432 (0%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCC 186
           +F  M+ +G +P   T+N ++  + K    +     F E + +  + D  ++  +I G  
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           + G L+       +++ M   P+V+ Y +LI+  CK G + +    FR++ + GL     
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +Y+ L+    K  + +   +FY  M+  G+ P+ +TY  L+  YC  G +S+ F+L DEM
Sbjct: 240 SYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               V  NVVTY  LI GLC   R++EAE L  +M  AG+ PN+ +Y  LI GF  A   
Sbjct: 300 SQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNM 359

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A  L +++K  G  P ++ Y   I +       + A  ++ EM+E+GI  +   YT L
Sbjct: 360 DRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW-ETK 485
           +D++ +S++  +   +   M +        T+ VLI GLC    + +A   F  +  +  
Sbjct: 420 MDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 479

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L+ N  +Y  MI G CKE     A  L  +M +KGLVP+  +Y+S I    + G   +A 
Sbjct: 480 LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQAL 539

Query: 546 VLLNQMLKLGLK 557
            L ++M ++G++
Sbjct: 540 ALRDKMAEIGVE 551



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 213/469 (45%), Gaps = 37/469 (7%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P    F++L   +I+   F++    FS+  RC+V     S   L+      G  +     
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
              +   G  P V  Y  +ID  CK GDIE A  LF ++   GL+    TY  +I G  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G   D   F+E+M+     P + TYN LI+ +C  GK+ +G + F EM+   +  NVV+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y+TL+   CKE  +Q+A +    M+  G+ PN  TY  L+D +C  G    AFRL +++ 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G   +VVTY  LI         K A +L  +M   G+ P+  +YT LI  FV++ +M+
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN--- 494
           +A E+   M+  G  PD+  YG  I  LC    ++ A  + N M E  ++ N  +Y    
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 495 --------------------------------MMIFGYCKEGNSYRALRLLGEM-NEKGL 521
                                           ++I G CK     +A+   G + N+ GL
Sbjct: 421 DAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 480

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
             N A Y++ I  LC++ +   A  L  QM + GL P  + Y  L   K
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGK 529



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 131/257 (50%)

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           ++ L   L +E   +EA +   +MK   + P   + N L+  F   G+TD   R F  + 
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  P+V TYN++I    K G+ + AS L  EM+ RG+ P  VTY  +ID + +   ++
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
                +  M+     PDV TY  LI+  C  G + +  + F  M ++ L+PN V Y+ ++
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
             +CKE    +AL+   +M   GLVPN  +Y+S +   C+ G   +A  L ++M ++G++
Sbjct: 246 DAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE 305

Query: 558 PSVSLYNILYRAKNNIE 574
            +V  Y  L     ++E
Sbjct: 306 WNVVTYTALIDGLCDVE 322


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 231/477 (48%), Gaps = 36/477 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  M   G+ P +  F SL+     +           E + + +E+ V ++ ILI G  +
Sbjct: 276 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGK 335

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
             D   A ++  + +    + N +IY+++I   C++G+++RA+ L R++ E G+ A    
Sbjct: 336 TNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDV 395

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  ++ G      +K     +E+++  G  PS+ +Y CLI+ Y   GKV +   +  EM 
Sbjct: 396 YHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEME 455

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N  TY+ LI G         A  + + M  +G+ P+   YN L++ FC  G  D
Sbjct: 456 SHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 515

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD--------------------- 406
           +A R+F ++K     PS  T+  +I  F+ AG+ K A D                     
Sbjct: 516 RAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALI 575

Query: 407 --LVREME-ER-----------GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             L+R+ + ER           GI P+E TYTI++  +  S D+ KAFE ++ +++SG  
Sbjct: 576 HGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 635

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            DVY Y  L+   C  G M+ A  +   M   K+  N  +YN++I G+ + G+ + A  L
Sbjct: 636 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 695

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +M E G+ PNI +++S I   C+ G    AE ++ +M  +GLKP+V  +  L + 
Sbjct: 696 MKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKG 752



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 207/429 (48%), Gaps = 1/429 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH +S   D+A     +M + G+    + ++S++     +    K  + F   
Sbjct: 360 IYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERL 419

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C     + S+G LI    + G + KA  V  ++E  G   N   Y+ LI+G     D 
Sbjct: 420 KECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDF 479

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + GL   +  Y +L+    K G        +E+M+   + PS  T+  +
Sbjct: 480 ANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPI 539

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +   G +       D MR    A  V+TYN LI GL ++ +V+ A  +LD+M +AGI
Sbjct: 540 IEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGI 599

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++T+   I+  C
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACC 719

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A  +   M +  L+PN   +  +I G+ K     RAL+   EM   GL P+ A
Sbjct: 720 KAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEA 779

Query: 527 SYSSTIGVL 535
           +Y   +  L
Sbjct: 780 AYHCLVTSL 788



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 190/429 (44%), Gaps = 45/429 (10%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++    + GD + A      +   G  PN  ++TSL+       D+  A     ++ 
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-----LNGVSPSLYTYNCLIHEYCN 292
             GL  T  TY++LI G  K    +   + +++ +     LNG+      Y+ +IH +C 
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGI-----IYSNIIHAHCQ 370

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLI---------------------CGL------ 325
            G +    +L  EM    +   +  Y++++                     CG       
Sbjct: 371 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIIS 430

Query: 326 --------CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
                    K  +V +A  +  +M+  GI  N  TY+ LI+GF    +   AF +F  + 
Sbjct: 431 YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            +G  P    YN+L+ AF K GN   A  +   M++  + PS  T+  +I+ F  + DM+
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMK 550

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A +   LM++SG +P V TY  LIHGL  K  ++ A  + + M    + PN+  Y +++
Sbjct: 551 RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIM 610

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY   G+  +A     ++ E GL  ++  Y + +   C+ G+   A  +  +M    + 
Sbjct: 611 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 670

Query: 558 PSVSLYNIL 566
            +  +YNIL
Sbjct: 671 RNTFIYNIL 679



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +AL    +M   G++  + T++ L+   I    F   +  F +  
Sbjct: 431 YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ D   + +L++  C+ G++++A  +  ++++    P+   +  +I+G    GD++
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMK 550

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA      +   G   T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 551 RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIM 610

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 611 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 670

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ T+   I A  KAG+ + A ++
Sbjct: 671 RNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENV 730

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++EM + G+ P+  T+T LI  + +    ++A + +  M+ +G  PD   Y  L+  L  
Sbjct: 731 IQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLS 790

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 791 RATVMEGS 798



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 154/323 (47%)

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           ++  + +++    K G +      +E M+  G+ P+ + +  L+H Y     +       
Sbjct: 252 SRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCV 311

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +EM+   +   VVTY+ LI G  K    + A++L  + K    + N I Y+ +I   C +
Sbjct: 312 EEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQS 371

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  D+A  L  +++ +G    +  Y+ ++  ++ A + K    +   ++E G  PS ++Y
Sbjct: 372 GNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISY 431

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ +V+   + KA  +   M+  G   +  TY +LI+G     +   A  +F  M +
Sbjct: 432 GCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIK 491

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + L+P+  +YN+++  +CK GN  RA+R+   M ++ + P+  ++   I      G    
Sbjct: 492 SGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKR 551

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL 566
           A   L+ M + G  P+V  YN L
Sbjct: 552 ALDTLDLMRRSGCAPTVMTYNAL 574



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 68/152 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + +++  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 246 ERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 305

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A      M    LE   V Y+++I GY K  ++  A +L  E   K    N   YS+ I
Sbjct: 306 GALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNII 365

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+ +M + G+   + +Y+
Sbjct: 366 HAHCQSGNMDRAEELVREMEEDGIDAPIDVYH 397


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 230/501 (45%), Gaps = 45/501 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y SI+ A  K+R  D+A     QM D+ ++P   T+ ++    I   S    W     +F
Sbjct: 310 YNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAM----IHGYSCLGRWKEAAKMF 365

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               R  +  D+ +F  L+   C+     +A E+ + +   G  P+++ Y+ L+ G    
Sbjct: 366 KEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATE 425

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G       LF  + + G+VA  H + +LI    K G+  +    + +M+  GVSP++ TY
Sbjct: 426 GRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTY 485

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG------------------- 324
             +I   C  G++++  +   +M    +  N V Y++LI G                   
Sbjct: 486 ATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMD 545

Query: 325 -----------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                            LC E RV  A+ + + +   G  P++ T+N LIDG+C  G+ D
Sbjct: 546 QGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMD 605

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF + + + S G  P VVTY+ LI  + K+G       L REM  + + P+ VTY++++
Sbjct: 606 KAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVL 665

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   R+     A +M+  M +SG +  + TY +++ GLC      EA  LF+ +    L+
Sbjct: 666 DGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLK 725

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
               + N MI    K      A  L   ++  GLVPN ++Y   I  L ++G   EA+++
Sbjct: 726 FEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIM 785

Query: 548 LNQMLKLGLKPSVSLYNILYR 568
            + M K G  PS  L N + R
Sbjct: 786 FSSMEKTGCAPSSRLLNDIIR 806



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 217/437 (49%), Gaps = 44/437 (10%)

Query: 171 VELDVYSFGILIKGCCEA--GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC--KNGDI 226
           V L V+++GIL+  CC A   DL  AF    +L   G   + ++  + +   C  K  D 
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAF--FARLLRAGLRTDGIVTNTFLKCLCYAKRTD- 217

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNC 285
           E   ML  ++ ELG V    +Y  +I  L      ++  +   +M + +G SP + +Y  
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM---------------- 329
           +IH    EG++S+   LF+EM  + V  NVVTYN+++  LCK                  
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 330 -------------------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
                              R +EA ++  +M   G+ P+++T+N L+D  C    + +A 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +F+ + + G  P +++Y++L+  ++  G     ++L   M + GI      + ILI++ 
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   M++A  +++ M+  G SP+V TY  +I  LC  G + +A +  + M    L+PN 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAEVLLN 549
           VVY+ +I G+C  G+  +A  L+ EM ++G+  PNI  +SS I  LC +G+   A+ + N
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 550 QMLKLGLKPSVSLYNIL 566
            ++ +G +P +  +N L
Sbjct: 578 LVIHIGDRPDIFTFNSL 594



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 219/443 (49%), Gaps = 2/443 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           F++M+  GV P   T+NS++  + K+ + DK  L   +     ++ D  ++  +I G   
Sbjct: 295 FNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSC 354

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G   +A ++  ++   G  P++V + SL+D  CK+   + A  +F  I   G      +
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y++L+ G    G   D    +  M  NG+    + +N LI+ +   G + E   +F EMR
Sbjct: 415 YSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMR 474

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            + V+ NVVTY T+I  LC+  R+ +A   L QM   G+ PN + Y+ LI GFC  G+  
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLI 534

Query: 368 KAFRLFNQLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           KA  L +++   G   P++  ++ +I +    G    A D+   +   G  P   T+  L
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID +     M+KAF +   M  +G  PDV TY  LI+G    G + +   LF  M   ++
Sbjct: 595 IDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV 654

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P  V Y++++ G  + G +  A ++  EM E G   +I++Y+  +  LC++    EA  
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714

Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
           L +++  + LK  +++ N +  A
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHA 737



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 35/417 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           FH M D+G+   S+ FN L+    K    D+  L F+E R + V  +V ++  +I   C 
Sbjct: 435 FHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCR 494

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L  A E L+Q+  +G  PN V+Y SLI G C +GD+ +AK L  ++ + G+      
Sbjct: 495 MGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP----- 549

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                                         P++  ++ +IH  CNEG+V     +F+ + 
Sbjct: 550 -----------------------------RPNITFFSSIIHSLCNEGRVMNAQDVFNLVI 580

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           H     ++ T+N+LI G C   ++ +A  +LD M  AG  P+V+TY+ LI+G+  +G  D
Sbjct: 581 HIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRID 640

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
               LF ++      P+ VTY++++    +AG +  A  +  EM E G   S  TYTI++
Sbjct: 641 DGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIIL 700

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
               R++  ++A  ++  +       ++     +IH L      +EA  LF S+  + L 
Sbjct: 701 QGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLV 760

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           PN   Y +MI    KEG+   A  +   M + G  P+    +  I +L Q G+  +A
Sbjct: 761 PNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 226/501 (45%), Gaps = 18/501 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A  +F   +R+GL   P  ++     L+  +  H  +     I   I+ +         
Sbjct: 360 EAAKMFKEMTREGL--IPDIVT--FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 87  SLLCH----------LTQLFPSSSNP--VTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           S+L H          +  LF S ++   V  S  +  +I+AH K  + D+AL  F +M  
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNK 193
            GV P   T+ +++  + +           S+     ++ +   +  LI+G C  GDL K
Sbjct: 476 QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIK 535

Query: 194 AFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           A E+++++ + G   PN+  ++S+I   C  G +  A+ +F  +  +G      T+  LI
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLI 595

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G    G     F   + M   G  P + TY+ LI+ Y   G++ +G  LF EM  + V 
Sbjct: 596 DGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK 655

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
              VTY+ ++ GL +  R   A+++  +M  +G + ++ TY  ++ G C    TD+A  L
Sbjct: 656 PTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITL 715

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F++L +      +   N +I A  K    + A DL   +   G+ P+  TY ++I + ++
Sbjct: 716 FHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLK 775

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              +E+A  M+S M+K+G +P       +I  L  KG + +A    + +  T +      
Sbjct: 776 EGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEAST 835

Query: 493 YNMMIFGYCKEGNSYRALRLL 513
            +++I  +  +G     ++ L
Sbjct: 836 TSLLISLFASKGRYREQIKFL 856



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 2/296 (0%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA- 334
           V  +++TY  L+   C   +   G   F  +    +  + +  NT +  LC   R  EA 
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR-LFNQLKSNGQSPSVVTYNVLIR 393
             LL +M   G  P+  +YN +I   C    + +A   L    K +G SP VV+Y ++I 
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
                G    A +L  EM ++G+ P+ VTY  ++ +  ++  M+KA  +   M  +   P
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           D  TY  +IHG    G  KEA+K+F  M    L P+ V +N ++   CK   S  A  + 
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +  KG  P+I SYS  +     +G++ +   L + M   G+      +NIL  A
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINA 456


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 211/406 (51%), Gaps = 11/406 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEE---MGFSPNVVIYTSLIDGCCKNG------ 224
           DV+S+  L+KG C+     +A E+L+ + +    G  P+VV Y ++++G  K G      
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221

Query: 225 --DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
              +++A  +   + + G++    TY  ++ G   +G  K+     +KM+ +GV P++ T
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 281

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ L++  C  G+ +E  K+FD M  R +  ++ TY TL+ G CKE RV E+E+L D M 
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P++ITYN LIDG C AG+ D+A +L   + S G  P +VTY  LI  + +     
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L +EM   G++P+ +TY I++     +     A E+Y  + KSG   ++ TY +++
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HGLC      EA ++F ++  T L+     +N+MI    K G    A  L    +  GLV
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           P++ +YS     L + G   E + L   M + G      + N + R
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 567



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 197/412 (47%), Gaps = 12/412 (2%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           KV   V+++ ILI  CC AG L+  F  L  + + GF  + + +T L+ G C +     A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
             ++ R++ ELG +    +Y  L+ GL      ++  E    M  +   G  P + +YN 
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 286 LIHEYCNEG--------KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           +++ +  EG         + +  ++ + M    V  + +TYN+++ G C   + +EA   
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L +M+  G+ PNV+TY+ L++  C  G + +A ++F+ +   G  P + TY  L++   K
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G    +  L   M   G+ P  +TY  LID    +  M++A ++ + M   G  PD+ T
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           YG LI+G C    M +A  LF  M  + + PN + YN+++ G      +  A  L   + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G    +++Y+  +  LC++    EA  +   +    L+     +NI+  A
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 498



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 244/539 (45%), Gaps = 86/539 (15%)

Query: 55  LSKMSSHSHAAAQTL---ILKIISGRITSSSFTPRSLL---CHLTQL---FPSSSNPVTK 105
           L+ ++ HS AAA +    + +  +G++T +  T   L+   C   +L   F +  N V K
Sbjct: 62  LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK 121

Query: 106 SRLYESIIDAHL------KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
               ++I    L        R SD       +M + G  P   ++N+LL          K
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL----------K 171

Query: 160 GWLFFSENRCKVEL----------------DVYSFGILIKGCCEAG--------DLNKAF 195
           G     ENR +  L                DV S+  ++ G  + G         ++KA 
Sbjct: 172 G--LCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAM 229

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           EVLN + + G  P+ + Y S++ G C +G  + A    +K+   G+     TY+ L+  L
Sbjct: 230 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            KNG   +  + ++ M   G+ P + TY  L+  +C EG+V E  KLFD M    V  ++
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDI 349

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +TYNTLI G C   ++ EA +LL  M   G+ P+++TY  LI+G+C     D A  LF +
Sbjct: 350 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 409

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG-------------------- 415
           + S+G SP+++TYN++++       +  A +L   + + G                    
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469

Query: 416 ------------ITPSEV---TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
                       +T  ++   T+ I+I + ++   M++A ++++    +G  PDV TY +
Sbjct: 470 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +   L  +G+++E   LF SM E     +  + N ++    + G+  RA   L  ++EK
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 588



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 169/356 (47%), Gaps = 1/356 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSEN 167
           Y SI+  +  S    +A+    +M   GV P   T++SL+ ++ K+  S +   +F S  
Sbjct: 247 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 306

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E D+ ++  L++G C+ G + ++ ++ + +  +G  P+++ Y +LIDGCC  G ++
Sbjct: 307 KRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 366

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L   +  +G+     TY  LI G  +     D    +++M  +GVSP++ TYN ++
Sbjct: 367 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 426

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
               +  + +   +L+  +        + TYN ++ GLCK     EA R+   + +  + 
Sbjct: 427 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 486

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
               T+N +I      G  D+A  LF    +NG  P V TY+++     + G+ +   DL
Sbjct: 487 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 546

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
              MEE G +        ++   ++  D+ +A     ++ +  FS +  T   L+ 
Sbjct: 547 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 602


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 235/451 (52%), Gaps = 1/451 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDV 175
            +++  D+AL  + +M + GV+P +  ++S LI +     +D  ++   E NR KV ++ 
Sbjct: 235 FQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEA 294

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ +++ G C+   L++A ++L      G +P+V  Y+ LI   CK G++  A   +  
Sbjct: 295 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEA 354

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G+    H  + L+    K G+  +   ++ K + +G+      YN  +  YC  G 
Sbjct: 355 MVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 414

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           ++E  KL +EM++  +  + + Y  LI G C +  +Q A+++ ++M  A I P+++TYN 
Sbjct: 415 MNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 474

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L  GFC +G   + F L +++   G  P+ +TY + I  F + GN   A  L   +EE+G
Sbjct: 475 LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 534

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I   EV Y+ ++  ++ S   + A+ ++  + + G   D ++   LI+ LC  GN++ AS
Sbjct: 535 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 594

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M E  + P+ + Y+ +I  YC+ G+  +A     +M ++GL  ++  Y+  +   
Sbjct: 595 NVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGY 654

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ G+  EA  L  QM  LG+KP V  Y +L
Sbjct: 655 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVL 685



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 264/583 (45%), Gaps = 47/583 (8%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           K  P  AF+ F      G  H   + S ++++L       SH+    +++ + S  ++SS
Sbjct: 77  KRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQIL-------SHSRQGKMLVSLFSELVSSS 129

Query: 82  SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
           + +   +L  +     + + P + S + + +I A +        +  F  +   GV P  
Sbjct: 130 NASGPEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSV 189

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            T+N LL F+ ++  ++     ++E +C ++  DVY+F I+ +   +A  +++A +V  +
Sbjct: 190 WTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAE 249

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + EMG  P+   Y+S + G C  G  + A ++ ++I    +      Y +++ GL K   
Sbjct: 250 MTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMR 309

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR--EVACNVVTY 318
             +  +  E     G +P +Y Y+ LI  YC  G +      ++ M     E  C++V+Y
Sbjct: 310 LDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSY 369

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
             L+    K     EA     + K +G+  + + YN  +D +C  G  ++A +L N++K 
Sbjct: 370 --LLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY 427

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G +P  + Y  LI  +   G  + A  +  EM +  I P  VTY IL   F +S  + +
Sbjct: 428 GGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVME 487

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
            F++   M   G  P+  TYG+ I G C  GN+ EA  LFN + E  ++  +V+Y+ M+ 
Sbjct: 488 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 547

Query: 499 GY-----------------------------------CKEGNSYRALRLLGEMNEKGLVP 523
           GY                                   C+ GN   A  +   M E  +VP
Sbjct: 548 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 607

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ SYS  I + CQ+G   +A +  + M++ GL   V +Y IL
Sbjct: 608 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 650



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 202/406 (49%), Gaps = 17/406 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSE 166
           +Y   +D + K+   ++A+   ++M   G+ P    +  L+  + +K    +   +F   
Sbjct: 401 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 460

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E D+ ++ IL  G C++G + + F++L+++ + G  PN + Y   I G C+ G++
Sbjct: 461 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 520

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A++LF  + E G+   +  Y+ ++CG   +G     +  + ++   G     ++ + L
Sbjct: 521 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 580

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I++ C  G V     +   M   +V  +V++Y+ LI   C+   + +A      M   G+
Sbjct: 581 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 640

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK----AGNSK 402
           S +VI Y  L++G+C AG   +A +LF Q+ + G  P V+ Y VL+    K     G   
Sbjct: 641 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 700

Query: 403 MASD------------LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           +A +            L+  M++  I P    YT+LID   +++ + +A E++  M + G
Sbjct: 701 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 760

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +PD Y Y  LI+G C +G + +A  L   M +  +EP+++ ++++
Sbjct: 761 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 20/245 (8%)

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQL--KSNGQSPSVVT--------------- 387
           G + +  TY+++I     + +      LF++L   SN   P ++                
Sbjct: 94  GFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEILPLVDHHRRTCATPCSL 153

Query: 388 ---YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
               + LI+A     + +    L   +   G+ PS  T+ +L+     + + E     Y+
Sbjct: 154 SFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYN 213

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M+    +PDVYT+ ++   L     + EA +++  M E  ++P+   Y+  + G C  G
Sbjct: 214 EMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCG 273

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A  +L E+N + +     +Y+  +  LC++ +  EAE LL    + G  P V  Y+
Sbjct: 274 KYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYS 333

Query: 565 ILYRA 569
            L R+
Sbjct: 334 YLIRS 338


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 218/423 (51%), Gaps = 4/423 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G  P S TF +L+  +  +    +  LF         +LD  S+ IL+ G C+ G
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           +   A ++L    +   + +VV+Y+++ID  CK   +  A  L+ ++   G+    +T++
Sbjct: 130 ETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +L+  L K+   K        M   GV P++ TY  ++  YC   +V++   +F+ M   
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  NV  YN +I GLCK+ RV EA  L  +M    I+P+V+TYN LIDG C  G+   +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L ++++S G++  ++TYN L+ A  K  +   A  LV+E++++GI P+  TYT LID 
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   +E A+ ++  +   G+   V+TY V+I+GLC KG   EA  L + M +    P+
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V Y  +I+   ++G + +  +LL  M  +GL   +    +   +   + KW     L +
Sbjct: 427 AVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLED 486

Query: 550 QML 552
            M+
Sbjct: 487 GMI 489



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 213/438 (48%), Gaps = 5/438 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           ML     P    FN +L  ++K   +      F +     ++  + +  IL+   C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +   F +L ++ +MG+ PN + +T+LI G C NG    A +    +   G    Q +Y +
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ GL K G  +   +   K  +N     +  Y+ +I   C    V++ ++L+ EM  + 
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  NV T++ L+  LCK+ + ++A  LL  M   G+ PNV+TY  ++DG+C   + +KA 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +FN +   G  P+V  YN++I    K      A +L +EM  + I P  VTY ILID  
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +   +  + E+   M+  G + D+ TY  L+H LC   ++ +A  L   + +  ++PN 
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             Y  +I G CK+G    A  +  E+  +G    + +Y+  I  LC+ G + EA  LL++
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417

Query: 551 MLKLGLKP-SVSLYNILY 567
           M      P +VS   I+Y
Sbjct: 418 MEDNACIPDAVSYETIIY 435



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 158/345 (45%), Gaps = 34/345 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID+  K +    A   + +M+  G+ P                            
Sbjct: 149 MYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP---------------------------- 180

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 +VY+F IL+   C+     +A  +L  + + G  PNVV Y +++DG C    + 
Sbjct: 181 ------NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  +F  + + G+      Y ++I GL K     +    +++M    ++P + TYN LI
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  GK+S   +L DEMR      +++TYN+L+  LCK   + +A  L+ ++K  GI 
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV TY  LIDG C  G  + A+ +F ++ + G   +V TYNV+I    K G    A  L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           +  ME+    P  V+Y  +I +     +  K  ++   M   G S
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 3/319 (0%)

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           ++  L K          + +++ NG+ PS+ T   L++ YC+ G ++  F +  ++    
Sbjct: 16  ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              N +T+ TLI G+C   +  EA    D +   G   + ++Y  L++G C  GET  A 
Sbjct: 76  YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM 135

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++  +   N     VV Y+ +I +  K      A  L  EM  +GI P+  T++IL+D+ 
Sbjct: 136 QMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +    ++A  + ++M K G  P+V TYG ++ G C+   + +A  +FN M +  +EPN 
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
             YN++I G CK+     A+ L  EM+ K + P++ +Y+  I  LC+ GK   +  L+++
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M  +G    +  YN L  A
Sbjct: 313 MRSIGKTVDIITYNSLLHA 331


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 238/514 (46%), Gaps = 48/514 (9%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-----S 156
           P  KSR  + ++   L +  +D AL  F +M   G    +  ++     VI++C      
Sbjct: 148 PDAKSRT-DLLVTTALGASAAD-ALTLFDEMRGKGCYADAKMYD----VVIRACVRGGMH 201

Query: 157 FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP-------- 208
            D   LF       V+ D   + I I G C+  D ++A +VL ++ E GF P        
Sbjct: 202 CDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSV 261

Query: 209 ----------------------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
                                       +VV+ T L+ G C NG++ +A  LF ++   G
Sbjct: 262 VDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDG 321

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +  T  TY VLI G    G+  + ++   +M   G+ PS Y +N +I     + +  +  
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAI 381

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L   +    V  +V TY  LI  LCK  ++ EA  L D+MK AG+ P+++TY+ L+ G+
Sbjct: 382 GLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C+ G  D+A +L++++   G  P+ VTY  L++ + K      A  L+ EM + G++  +
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY ILI+     + + +  EM       GF P   TY  +I+G    G M  A  ++  
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +  + PN V Y   I GYC+      A++LL  +   G+ P+IA+Y++ I   C+ G 
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              A   L  +LK GL P V++YN       N++
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLK 654



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 219/456 (48%), Gaps = 8/456 (1%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-FFSENRCKVEL---DVY 176
           ++D+      QM++ G+ P +  FN     VIK    DK W       +  V+    DV+
Sbjct: 341 MTDETYKLCRQMIEQGLLPSTYEFN----LVIKGLLRDKRWKDAIGLLKLVVDTGVPDVF 396

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G LI   C+   L++A  + ++++E G  P++V Y SL+ G C+ G ++ A  L+ ++
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G    + TYT L+ G  K     + +    +M+ NGVS   YTYN LI+      +V
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  ++             +TYN++I G  K   +  A  +  QM+  GI+PN++TY   
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG+C     D A +L   ++ +G  P +  YN  I  F K GN   A   +  + + G+
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           TP    Y   +  +     M +A + Y  M K     D   Y  LI G    GN+  A +
Sbjct: 637 TPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALE 696

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           L++ M    + P+D  +  +  G C+ G+   A RLL +M    + PNI +Y+  I    
Sbjct: 697 LYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACV 756

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +DGK  EA  L ++ML  G+ P  + Y+IL R  N+
Sbjct: 757 RDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRTNNS 792



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 34/149 (22%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + +Y ++ID   K      AL  + +M+ + V P   TF +                
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA---------------- 715

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                             L  G C +GD++ A  +L+ +  +  SPN+V Y  LI+ C +
Sbjct: 716 ------------------LTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +G ++ A  L  ++   G+V    TY +L
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 233/463 (50%), Gaps = 6/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + SII+ + K  +  +A+    +M+   V P +  +  L+    K+   D    F  E +
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMK 558

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +E     F IL+      G +++A  ++  +   G  P++V Y SLIDG  K G+  
Sbjct: 559 SRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQL 618

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  + +++ E  +      Y  LI GL + G + D      +M   G++P   TYN +I
Sbjct: 619 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLG-KYDPRYVCSRMIELGLAPDCITYNTII 677

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + YC +GK  +   + +EM+   +  N VTYN LI GLCK   V++AE  LD+M +    
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFV 737

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P  IT+  L+  +  + + DK  ++  +L ++G   S+  YN LI  F + G ++ A  +
Sbjct: 738 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV 797

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM +RGI+   VTY  LI  +     +EKA + YS M   G +P++ TY  L+ GL  
Sbjct: 798 LDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSN 857

Query: 468 KG----NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            G     M+E  KL + M E  L PN   Y++++ GY + GN  + + L  EM  KG VP
Sbjct: 858 AGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP 917

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +Y+  I    + GK  EA  LLN +L  G  P+   Y+IL
Sbjct: 918 TLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 242/518 (46%), Gaps = 66/518 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD----KGWLFF 164
           Y ++I    +  L DQ      +M+  G+   S T N   I V   C         W+ +
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCN---ILVKGYCRIGLVQYAEWVMY 221

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           +     V  DV     LI G CEAG +++A E++          ++V Y +L+   CK G
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 225 DIERAKMLFRKIGELGL-----------VATQH----------TYTVLICGLFKNGLQKD 263
           D+ RA+ LF +I  LG            V TQ+          TYT LI    K    ++
Sbjct: 282 DLTRAESLFNEI--LGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEE 339

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
               Y+KM +NG+ P + T + +++ +C  GK++E   LF EM    +  N V+Y T+I 
Sbjct: 340 SHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIIN 399

Query: 324 GLCKEMRVQEAERLLDQMKMAGIS-----------------------------------P 348
            L K  RV EA  L  QM + GIS                                   P
Sbjct: 400 SLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAP 459

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N +TY+ L+DG+C  G+ + A  +  +++     P+V+T++ +I  ++K G    A D++
Sbjct: 460 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 519

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           REM +R + P+ + Y ILID + ++ + + A +    M+          + +L++ L   
Sbjct: 520 REMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 579

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G M EA  L   M+   ++P+ V Y  +I GY KEGN   AL ++ EM EK +  ++ +Y
Sbjct: 580 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 639

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  L + GK+ +   + ++M++LGL P    YN +
Sbjct: 640 NALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTI 676



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 241/513 (46%), Gaps = 54/513 (10%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---- 166
           ++ID + ++ L  QA         S V+    T+N+LL    K+    +    F+E    
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 167 ----NRCK------------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
               +R K            ++  + ++  LI   C+   + ++  +  ++   G  P+V
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V  +S++ G C++G +  A +LFR++ E+GL     +Y  +I  LFK+G   + F    +
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M + G+S  + T   ++      GK  E  ++F+ +    +A N VTY+ L+ G CK  +
Sbjct: 417 MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGK 476

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           ++ AE +L +M+   + PNVIT++ +I+G+   G   KA  +  ++      P+ + Y +
Sbjct: 477 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 536

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI  + KAG   +A D  +EM+ R +  S V + IL+++  R   M++A  +   M   G
Sbjct: 537 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596

Query: 451 FSPDVYTYGVLIHGLCMKGN----------MKEASKLFN--------------------- 479
             PD+  Y  LI G   +GN          MKE +  F+                     
Sbjct: 597 IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY 656

Query: 480 ---SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
               M E  L P+ + YN +I  YC +G +  AL +L EM   G++PN  +Y+  IG LC
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + G   +AE  L++ML +   P+   +  L +A
Sbjct: 717 KTGAVEKAESALDEMLVMEFVPTPITHKFLVKA 749



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 222/467 (47%), Gaps = 20/467 (4%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSF 178
           S L  Q    +  ML  GV P   + N L+  + K    D    +   N   V++D  ++
Sbjct: 107 SGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV-VDIDNVTY 165

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             +I G C+ G +++ F +L+++ + G   + +    L+ G C+ G ++ A+ +   + +
Sbjct: 166 NTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVD 225

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+         LI G  + GL     E  E    + V   + TYN L+  +C  G ++ 
Sbjct: 226 GGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTR 285

Query: 299 GFKLF----------DEMRHREVAC---------NVVTYNTLICGLCKEMRVQEAERLLD 339
              LF          D +++ +V            +VTY TLI   CK + V+E+  L  
Sbjct: 286 AESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYK 345

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M M GI P+V+T + ++ GFC  G+  +A  LF ++   G  P+ V+Y  +I +  K+G
Sbjct: 346 KMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG 405

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A +L  +M  RGI+   VT T ++D   +    ++A E++  + K   +P+  TY 
Sbjct: 406 RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYS 465

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            L+ G C  G M+ A  +   M +  + PN + ++ +I GY K+G   +A+ +L EM ++
Sbjct: 466 ALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR 525

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            ++PN   Y+  I    + G+   A+    +M    L+ S  +++IL
Sbjct: 526 NVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 195/416 (46%), Gaps = 18/416 (4%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A      M   G+ P    + SL+    K  +         E + K +  DV ++  L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           IKG    G  +  + V +++ E+G +P+ + Y ++I+  C  G  E A  +  ++   G+
Sbjct: 643 IKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    TY +LI GL K G  +      ++M +    P+  T+  L+  Y    K  +  +
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           + +++    +  ++  YNTLI   C+    ++A+ +LD+M   GIS +++TYN LI G+C
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 821

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG----NSKMASDLVREMEERGIT 417
                +KA + ++Q+  +G +P++ TYN L+   S AG      +    LV EM ERG+ 
Sbjct: 822 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 881

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+  TY IL+  + R  + +K   ++  M   GF P + TY VLI      G M EA +L
Sbjct: 882 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 941

Query: 478 FNSMWETKLEPNDVVYNMMIFGY------------CKEGNSYRALRLLGEMNEKGL 521
            N +      PN   Y+++  G+             K        +LL EM  KGL
Sbjct: 942 LNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 997



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 197/416 (47%), Gaps = 21/416 (5%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           K  L V  F  LI+        + A    + +  +G  P +  + +L+     +G + + 
Sbjct: 54  KTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQV 113

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K+++  +   G+V    +  VL+  L K G       +     +  V     TYN +I  
Sbjct: 114 KLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWG 171

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C +G V +GF L  EM  R +  + +T N L+ G C+   VQ AE ++  +   G++ +
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKD 231

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA----- 404
           VI  N LIDG+C+AG   +A  L      +     +VTYN L++AF K G+   A     
Sbjct: 232 VIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN 291

Query: 405 --------------SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                         +D+V + E + + P+ VTYT LI ++ +   +E++  +Y  M  +G
Sbjct: 292 EILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG 351

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PDV T   +++G C  G + EA+ LF  M+E  L+PN V Y  +I    K G    A 
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L  +M  +G+  +I + ++ +  L + GK  EAE +   +LKL L P+   Y+ L
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSAL 467



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 226/466 (48%), Gaps = 4/466 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +II++  KS    +A     QM+  G+     T  +++  + K     +    F E  
Sbjct: 394 YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVF-ETI 452

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K+ L  +  ++  L+ G C+ G +  A  VL ++E+    PNV+ ++S+I+G  K G +
Sbjct: 453 LKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGML 512

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  + R++ +  ++     Y +LI G FK G Q    +F ++M+   +  S   ++ L
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++     G++ E   L  +M  + +  ++V Y +LI G  KE     A  ++ +MK   I
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +V+ YN LI G    G+ D  + + +++   G +P  +TYN +I  +   G ++ A D
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD 691

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ EM+  GI P+ VTY ILI    ++  +EKA      M    F P   T+  L+    
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYS 751

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                 +  ++   +  + LE +  VYN +I  +C+ G + +A  +L EM ++G+  ++ 
Sbjct: 752 RSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLV 811

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           +Y++ I   C      +A    +QM   G+ P+++ YN L    +N
Sbjct: 812 TYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSN 857



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 2/197 (1%)

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F+ +++ G  P++  +N L+  F+ +G       +  +M   G+ P   +  +L+ S  +
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D++ A     L        D  TY  +I G C KG + +   L + M +  L  + + 
Sbjct: 142 VGDLDLALGY--LRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            N+++ GYC+ G    A  ++  + + G+  ++   ++ I   C+ G   +A  L+    
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259

Query: 553 KLGLKPSVSLYNILYRA 569
           +  +K  +  YN L +A
Sbjct: 260 RSDVKIDIVTYNTLLKA 276


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 194/393 (49%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           + Y++G L++  C+A    +A  V   +   G SPNV  Y+ LI G C+   ++ A  L 
Sbjct: 51  NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G      TY  L+ GL K G  K+  + + +M   G  P    YN LI  +  +
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + E ++LF+EM  +     V TYN+L+ G  ++      + L   M   G  PN+ T+
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+DGFC  G+  +A RLF +++S G  P VV+YN LIR     G    A  L+REM  
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR 290

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  V+Y ILID + +S  ++ A +++  + KSG  PD ++Y  +I  LC  G +  
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  M      P+  V   ++ G C+      +  L   M +   VP I  Y+  + 
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +  +   + +++ + G  P V +  ++
Sbjct: 411 KLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y  L++   K+G  +     +  +   G V   +TY  L+  L +    ++    +  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G SP++++Y+ LI   C   KV E  +L +EM       NVVTY +L+ GLCK  +++
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA  L  +M   G  P+ + YN LIDGF   G+  +A+RLF ++   G  P+V TYN L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             FS+ G       L ++M  +G  P+  T+  L+D F +  DM +A  ++  M+  G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PDV +Y  LI G+C KG   EA +L   M  + + P+ V YN++I GY K G    A++L
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
             E+ + GL P+  SYS+ I  LC+ GK   A V+   M+  G  P  ++
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 162/320 (50%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +Y  L+  L K+G     +  Y  M   G  P+ YTY  L+   C   +  E   +F  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +  + NV +Y+ LI GLC+  +V EA  LL++M   G  PNV+TY  L+ G C  G+ 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  LF+++   G  P  V YNVLI  FSK G+   A  L  EM E+G  P+  TY  L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +  F R  +  +   ++  M + G  P+++T+  L+ G C  G+M EA +LF  M     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ V YN +I G C +G  + A RLL EM   G+ P+I SY+  I    + G    A  
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L  ++ K GL+P    Y+ +
Sbjct: 319 LFYEIPKSGLEPDAFSYSTI 338



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 6/371 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I    + +  D+A    ++M+D G +P   T+ SLL  + K     +    FS   
Sbjct: 90  YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C  +  VY+  +LI G  + GD+ +A+ +  ++ E G  P V  Y SL+ G  + G+
Sbjct: 150 YRGCPPDGVVYN--VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             R + LF+ +   G V    T+  L+ G  K G   +    + +M+  G  P + +YN 
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C++GK  E  +L  EM    V  ++V+YN LI G  K   +  A +L  ++  +G
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  +Y+ +ID  C AG+   AF +F  + +NG +P       L+    +      + 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L + M +    P    Y +L+    ++   +   E++  + + GFSPDV    V++  L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447

Query: 466 CMKGNMKEASK 476
             + + K+A++
Sbjct: 448 -RRSDDKDAAE 457



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 127/288 (44%), Gaps = 35/288 (12%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
             ++YN L+  L K  R        + M  AG  PN  TY  L+   C A   ++A  +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 374 NQLKSNGQSPSVVTYNVLI-----------------------------------RAFSKA 398
             + + G SP+V +Y++LI                                       K 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G  K A DL   M  RG  P  V Y +LID F +  DM +A+ ++  M + G  P V+TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G   KG       LF  M      PN   +N ++ G+CK G+   A RL  EM  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G  P++ SY++ I  +C  GK  EA+ LL +M++ G+ P +  YNIL
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 169/390 (43%), Gaps = 15/390 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A S+F   + QG      S SI++  L           A  L+ ++I G    +  T  
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE---AAELLNEMIDGGHQPNVVTYG 126

Query: 87  SLLCHLTQLFPSSSNPVTKSRL-----------YESIIDAHLKSRLSDQALFYFHQMLDS 135
           SLL  L ++          SR+           Y  +ID   K     +A   F +ML+ 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P   T+NSLL    +   F +    F +  R     ++++F  L+ G C+ GD+ +A
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +  ++  +G  P+VV Y +LI G C  G    A+ L R++   G+     +Y +LI G
Sbjct: 247 HRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K+G      + + ++  +G+ P  ++Y+ +I   C  GKV   F +F +M     A +
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                 L+ GLC+  R+ E+  L   M      P +  YN L+   C A  +D    +F+
Sbjct: 367 AAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFH 426

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           +L   G SP V    V++    ++ +   A
Sbjct: 427 ELTERGFSPDVEISKVILETLRRSDDKDAA 456


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 238/505 (47%), Gaps = 38/505 (7%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P    R +  +I  + K      A   F  M   G+ P +  F SL +         +G 
Sbjct: 273 PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSL-VHAYAVARDMRGA 331

Query: 162 LFFSENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           L  +E      +EL + ++ ILI G  +  D   A  +  + +      N +IY+++I  
Sbjct: 332 LSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHA 391

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C++G+++RA+ L  ++ E G+ A    Y  ++ G      +K     +E+++    +PS
Sbjct: 392 HCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPS 451

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + +Y CLI+ Y   GKV++   +  EM    +  N  TY+ LI G         A R+ +
Sbjct: 452 IISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFE 511

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL----------------------- 376
           +M  +G+ P+   YN LI+ FC  G  D+A R+  ++                       
Sbjct: 512 EMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571

Query: 377 ------------KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
                       + +G +P+V+TYN LI    +    + A  ++ +M   GITP+E TYT
Sbjct: 572 DMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYT 631

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           I++  +  + D+ KAFE ++ +++ G   DVY Y  L+   C  G M+ A  +   M   
Sbjct: 632 IIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQ 691

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           K+  N  VYN++I G+ + G+ + A  L+ +M E G+ PNI +Y+S I   C+ G    A
Sbjct: 692 KIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 751

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
           + ++++M  +GLKP++  Y  L + 
Sbjct: 752 QTVIDEMSDVGLKPNLKTYTTLIKG 776



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 207/433 (47%), Gaps = 9/433 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----IFVIKSCSFDKGWL 162
           +Y +II AH +S   D+A    H+M + G+    + ++S++     I   K C      +
Sbjct: 384 IYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLI----V 439

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F     C     + S+G LI    + G + KA  +  ++E  G   N   Y+ LI G   
Sbjct: 440 FERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIH 499

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             D   A  +F ++ + GL   +  Y +LI    K G         EKMQ   + PS   
Sbjct: 500 LHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRA 559

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           +  +I  +   G +     + D MR    A  V+TYN LI GL ++ +V+ A  +L++M 
Sbjct: 560 FRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMS 619

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           +AGI+PN  TY  ++ G+   G+  KAF  F ++K  G    V  Y  L+RA  K+G  +
Sbjct: 620 IAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQ 679

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I
Sbjct: 680 SALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYI 739

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +  C  G+M+ A  + + M +  L+PN   Y  +I G+ +     RAL+   EM   GL 
Sbjct: 740 NACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLK 799

Query: 523 PNIASYSSTIGVL 535
           P+ A+Y   +  L
Sbjct: 800 PDEAAYHCLVTSL 812



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 184/368 (50%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +A+    +M  SG++  + T++ L+   I    F   +  F E  
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +   +   G   T  TY  LI GL +    +       KM + G++P+ +TY  ++
Sbjct: 575 RALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G +++ F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I+
Sbjct: 635 RGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIA 694

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 695 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTV 754

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + R+   ++A + +  M+ +G  PD   Y  L+  L  
Sbjct: 755 IDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLS 814

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 815 RATVMEGS 822



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 160/334 (47%), Gaps = 3/334 (0%)

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           ++  + ++I    K G +      +E M+  G+ P+ + +  L+H Y     +       
Sbjct: 276 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCT 335

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +EM+   +   +VTY+ LI G  K    Q A+ L  + K      N I Y+ +I   C +
Sbjct: 336 EEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQS 395

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  D+A  L ++++ +G    +  Y+ ++  ++   + K    +   ++E   TPS ++Y
Sbjct: 396 GNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISY 455

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ +V+   + KA  +   M+ SG   +  TY +LI G     +   A ++F  M +
Sbjct: 456 GCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLK 515

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + L+P+  +YN++I  +CK GN  RA+R+L +M ++ + P+  ++   I      G    
Sbjct: 516 SGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR 575

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA---KNNIE 574
           A  +L+ M + G  P+V  YN L      KN +E
Sbjct: 576 ALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVE 609



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 66/152 (43%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + ++I  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 270 ERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 329

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A      M    +E   V Y+++I G+ K  ++  A  L  E        N   YS+ I
Sbjct: 330 GALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNII 389

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+++M + G+   +  Y+
Sbjct: 390 HAHCQSGNMDRAEELVHEMEEDGIDAPIDAYH 421


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 206/428 (48%), Gaps = 36/428 (8%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D YS  ++++G C  G + +   ++      G  P  V Y  LIDG C+ GDI R  +L 
Sbjct: 80  DDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G++ T  TY  +I  L + G          +M+  G+SP++  YN +I+  C  
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKC 199

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
              S+   + ++M       +VVT+NT+I G C+E  V+EA +LL +    G+ PN ++Y
Sbjct: 200 RSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSY 259

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT-------------------------- 387
             LI GFC  GE   A  L  ++   G +P ++T                          
Sbjct: 260 TPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319

Query: 388 ---------YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
                    YNVLI    K      A +L+ EM E+ + P +  YT LID FVRSD +  
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A +++  M++    PD+  Y V+I G C  G MKEA    +SM +    P++  Y  ++ 
Sbjct: 380 ARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVD 438

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GY K+G+   +LRLL +M ++   PNI +Y+S I   C  G    AE L  +M   GL P
Sbjct: 439 GYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFP 498

Query: 559 SVSLYNIL 566
           +V  Y +L
Sbjct: 499 NVVHYTVL 506



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 220/480 (45%), Gaps = 17/480 (3%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y  +ID + +     + L    +M   G+ P   T+ +++ ++ +     K   
Sbjct: 113 VPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVES 172

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
              E R + +  +V  +  +I   C+    ++A ++LNQ+ +  F+P+VV + ++I G C
Sbjct: 173 LLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFC 232

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + GD+  A  L R+    GL   Q +YT LI G    G      +   +M   G +P + 
Sbjct: 233 REGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMI 292

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T   LIH     G+V++   + ++M  R+V  +   YN LI GLCK+  +  A+ LL++M
Sbjct: 293 TLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEM 352

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               + P+   Y  LIDGF  + +   A ++F  ++     P +V YNV+I+ + K G  
Sbjct: 353 LEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMM 411

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           K A   +  M + G  P E TYT L+D + +  D+  +  +   M K    P+++TY  L
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASL 471

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I G C  G+   A  LF  M    L PN V Y ++I    K+    +A      M     
Sbjct: 472 ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHC 531

Query: 522 VPNIASYSSTIGVL--CQDG----------KWPEAEVLLN---QMLKLGLKPSVSLYNIL 566
            PN A+    +  L  C+ G          +  E   LL+    ++  GL P +S YN +
Sbjct: 532 PPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAI 591



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 217/458 (47%), Gaps = 22/458 (4%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y ++I+A  K R + QA    +QM+ S   P   TFN+++    +     +      E
Sbjct: 187 QIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLRE 246

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
             R  +E +  S+  LI G C  G+   A ++L ++   G +P+++   +LI G   +G 
Sbjct: 247 AIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQ 306

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A ++  K+ E  ++   + Y VLI GL K  +        E+M    V P  + Y  
Sbjct: 307 VNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTT 366

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVAC-NVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           LI  +    K+S+  K+F+ M   E AC ++V YN +I G CK   ++EA   +  M+ A
Sbjct: 367 LIDGFVRSDKLSDARKIFEFME--EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKA 424

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P+  TY  L+DG+   G+   + RL   +      P++ TY  LI  +   G++  A
Sbjct: 425 GCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSA 484

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            DL  +M+  G+ P+ V YT+LI S  + D + +A   +  M  +   P+  T   L++G
Sbjct: 485 EDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544

Query: 465 L--CMKG-------NMKEASK------LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           L  C  G       + K+A +      +F  +    L+P    YN +IF  C+     +A
Sbjct: 545 LVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKA 604

Query: 510 LRLLGEMNEKGLVPNIASYSSTI---GVLCQDGKWPEA 544
           + L  +M+ KG +P+  ++ S +       + GKW  A
Sbjct: 605 MDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSA 642



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 172/343 (50%), Gaps = 1/343 (0%)

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           ERA+ L+ ++      A  ++  V++ GL   G  ++G    E     G  P    YN L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G +  G  L  EM  + +   VVTY  +I  L ++  + + E LL +M+  G+
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPNV  YN +I+  C      +A  + NQ+  +  +P VVT+N +I  F + G+ + A  
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+RE   RG+ P++++YT LI  F    +   A ++   M   G +PD+ T G LIHGL 
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + G + +A  +   M E ++ P+  +YN++I G CK+     A  LL EM E+ + P+  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            Y++ I    +  K  +A  +   M +    P +  YN++ + 
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKG 404



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 172/419 (41%), Gaps = 40/419 (9%)

Query: 27  KAFSLFNWASRQGLQ-----HTP-------QSISIILRLLLSKMSSHSHAAAQTLILKII 74
           +A  L   A R+GL+     +TP       +  +++   LL +M    H      +  +I
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI 298

Query: 75  SGRITSS----SFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFH 130
            G + S     +   R  +    Q+ P ++       +Y  +I    K R+   A     
Sbjct: 299 HGLVVSGQVNDALIVREKMAE-RQVMPDAN-------IYNVLISGLCKKRMLSAAKNLLE 350

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           +ML+  V+P    + +L+   ++S         F     K   D+ ++ ++IKG C+ G 
Sbjct: 351 EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGM 410

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           + +A   ++ + + G  P+   YT+L+DG  K GDI  +  L   + +        TY  
Sbjct: 411 MKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYAS 470

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LICG    G      + + KMQ  G+ P++  Y  LI     + KV +    F+ M    
Sbjct: 471 LICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNH 530

Query: 311 VACNVVTYNTLICGL--CKEMRV----------QEAERLLDQMK---MAGISPNVITYNK 355
              N  T + L+ GL  C+   V           E   LLD  +     G+ P +  YN 
Sbjct: 531 CPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNA 590

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS-KMASDLVREMEE 413
           +I   C      KA  L +++ + G  P  +T+  L+  FS AG S K  S L  E ++
Sbjct: 591 IIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQ 649



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 36/262 (13%)

Query: 341 MKMAGISPN-----------------------VITYNKLIDGFCDAGET----------- 366
           M +AG +P                             +L     DA +            
Sbjct: 1   MSLAGAAPTRGSLGALAAAYADAGMEEKAAEACARARELHGALPDAPDCNCLLRLLVERR 60

Query: 367 --DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             ++A  L+ ++          +  V++R     G  +    L+      G  P  V Y 
Sbjct: 61  RWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYN 120

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           +LID + R  D+ +   +   M+  G  P V TYG +IH L  KG++ +   L   M   
Sbjct: 121 VLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRAR 180

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L PN  +YN +I   CK  ++ +A  +L +M +    P++ ++++ I   C++G   EA
Sbjct: 181 GLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREA 240

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
             LL + ++ GL+P+   Y  L
Sbjct: 241 LKLLREAIRRGLEPNQLSYTPL 262


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 186/351 (52%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E  + +FG L+ G C    +  AF ++  + + G+ PNVV+Y +LIDG CKNG++  A  
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++ + GL A   TY  L+ GL  +G   D       M    ++P + T+  LI  + 
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G + E  +L+ EM    V  N VTYN++I GLC   R+ +A++  D M   G  PNV+
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN LI GFC     D+  +LF ++   G +  + TYN LI  + + G  ++A D+   M
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             R +TP  +T+ IL+     + ++E A   +  M++S     +  Y ++IHGLC    +
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           ++A +LF  +    ++P+   Y +MI G CK G    A  L+  M E+G++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 218/452 (48%), Gaps = 9/452 (1%)

Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
           E +    L S   + A   F +M+ S   P    F  LL        ++   ++FS+   
Sbjct: 40  EKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYET-VIYFSQ--- 95

Query: 170 KVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           K+EL     D+YSF ILI   C    L+ A  VL ++ ++G+ P++V + SL+ G C   
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A  L   + + G       Y  LI GL KNG      E   +M+  G+   + TYN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+   C  G+ S+  ++  +M  R +  +VVT+  LI    K+  + EA+ L  +M  +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + PN +TYN +I+G C  G    A + F+ + S G  P+VVTYN LI  F K       
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L + M   G      TY  LI  + +   +  A +++  M     +PD+ T+ +L+HG
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC+ G ++ A   F+ M E++     V YN+MI G CK     +A  L   +  +G+ P+
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
             +Y+  I  LC++G   EA+ L+ +M + G+
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 163/300 (54%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F +KM+L G+S  LY++  LIH +C   ++S    +  +M       ++VT+ +L+ G C
Sbjct: 93  FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
              R+ +A  L+  M  +G  PNV+ YN LIDG C  GE + A  L N+++  G    VV
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TYN L+     +G    A+ ++R+M +R I P  VT+T LID FV+  ++++A E+Y  M
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            +S   P+  TY  +I+GLCM G + +A K F+ M      PN V YN +I G+CK    
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              ++L   M+ +G   +I +Y++ I   CQ GK   A  +   M+   + P +  + IL
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 1/310 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           +Y ++ID   K+   + AL   ++M   G+     T+N+LL  +  S  + D   +    
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +  DV +F  LI    + G+L++A E+  ++ +    PN V Y S+I+G C +G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             AK  F  +   G      TY  LI G  K  +  +G + +++M   G +  ++TYN L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH YC  GK+     +F  M  R V  +++T+  L+ GLC    ++ A    D M+ +  
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
              ++ YN +I G C A + +KA+ LF +L   G  P   TY ++I    K G  + A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477

Query: 407 LVREMEERGI 416
           L+R M+E GI
Sbjct: 478 LIRRMKEEGI 487



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 142/305 (46%)

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +D F  + +M  +   PS+  +  L+    N  +         +M    ++ ++ ++  L
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I   C+  R+  A  +L +M   G  P+++T+  L+ GFC       AF L   +  +G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+VV YN LI    K G   +A +L+ EME++G+    VTY  L+     S     A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           M   M K   +PDV T+  LI     +GN+ EA +L+  M ++ ++PN+V YN +I G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
             G  Y A +    M  KG  PN+ +Y++ I   C+     E   L  +M   G    + 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 562 LYNIL 566
            YN L
Sbjct: 353 TYNTL 357



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%)

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +  + F LF EM H +   ++V +  L+       R +       +M++ GIS ++ ++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  FC       A  +  ++   G  PS+VT+  L+  F        A  LV  M + 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y  LID   ++ ++  A E+ + M+K G   DV TY  L+ GLC  G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
           +++   M +  + P+ V +  +I  + K+GN   A  L  EM +  + PN  +Y+S I  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G+  +A+   + M   G  P+V  YN L
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 110/212 (51%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           KL  GF  +   + AF LF ++  +   PS+V +  L+ A +     +      ++ME  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           GI+    ++TILI  F R   +  A  +   M K G+ P + T+G L+HG C+   + +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M ++  EPN VVYN +I G CK G    AL LL EM +KGL  ++ +Y++ +  
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC  G+W +A  +L  M+K  + P V  +  L
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 38/327 (11%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LL++M      A       +++G   S  ++  + +  L  +   S NP   +  + ++I
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM--LRDMMKRSINPDVVT--FTALI 253

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
           D  +K    D+A   + +M+ S V P + T+NS                           
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS--------------------------- 286

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
                  +I G C  G L  A +  + +   G  PNVV Y +LI G CK   ++    LF
Sbjct: 287 -------IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +++   G  A   TY  LI G  + G  +   + +  M    V+P + T+  L+H  C  
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++      FD+MR  E    +V YN +I GLCK  +V++A  L  ++ + G+ P+  TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNG 380
             +I G C  G   +A  L  ++K  G
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 119/241 (49%)

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G    +R ++A  L  +M  +   P+++ + +L+    +    +       +++  G S 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            + ++ +LI  F +      A  ++ +M + G  PS VT+  L+  F   + +  AF + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
            LM KSG+ P+V  Y  LI GLC  G +  A +L N M +  L  + V YN ++ G C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A R+L +M ++ + P++ ++++ I V  + G   EA+ L  +M++  + P+   Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 564 N 564
           N
Sbjct: 285 N 285



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 13/228 (5%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAH-LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI 152
           ++  SS +P   +  Y SII+   +  RL D A   F  M   G  P   T+N+L+    
Sbjct: 271 EMIQSSVDP--NNVTYNSIINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFC 327

Query: 153 KSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
           K    D+G   F    C+    D++++  LI G C+ G L  A ++   +     +P+++
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGE----LGLVATQHTYTVLICGLFKNGLQKDGFEF 267
            +  L+ G C NG+IE A + F  + E    +G+VA    Y ++I GL K    +  +E 
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA----YNIMIHGLCKADKVEKAWEL 443

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           + ++ + GV P   TY  +I   C  G   E  +L   M+   + C +
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 286/639 (44%), Gaps = 111/639 (17%)

Query: 41  QHTPQSISIILRLLL-SKMSSHSHAAAQTLI-----------LKIISGRITSSSFTPRSL 88
            H  QSI II R+L+ SKM +      Q L+           L+ +   +  S F  +++
Sbjct: 36  NHRSQSIPIISRILIRSKMFNELDDLHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAI 95

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
             H   L  +         LY  ++ + ++    +   + +  M+ + V P + TFN L+
Sbjct: 96  -SHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLI 154

Query: 149 IFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS 207
             +  S   +     F +   +  E + ++FGIL++G C AG  +K  E+L Q+  MG  
Sbjct: 155 GLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGIL 214

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           PN V+Y +LI   CK G    A+ L  K+ E GLV    T+   I  L  +G   +    
Sbjct: 215 PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRI 274

Query: 268 YEKMQLN---GVS-PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
           +  MQ++   G+  P++ TY  ++  +C EG + E   L D M+      N+ +YN  + 
Sbjct: 275 FRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLL 334

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNV--------------------------------- 350
           GL +  ++ EA  +L +M   GI P++                                 
Sbjct: 335 GLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILP 394

Query: 351 --ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
             +TY+ L+ G+C  G+  +A  L +++ SN  SP+  T NVL+ +  K G    A +L+
Sbjct: 395 DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLL 454

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG------------------ 450
           ++M E+G     VT  I+I++   +  ++KA E+ + M   G                  
Sbjct: 455 QKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDT 514

Query: 451 -----FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG- 504
                 +PD+ TY  +I GLC  G + +A K F  M    L+P+  +Y+  I  +C+EG 
Sbjct: 515 ISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGK 574

Query: 505 --NSYRALR--------------------------------LLGEMNEKGLVPNIASYSS 530
             ++++ L+                                L+ EM EKG+ P++ +Y+ 
Sbjct: 575 ISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNH 634

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  LC+ G+  +A  +L++ML+ G+ P++S + IL +A
Sbjct: 635 MLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKA 673



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 236/506 (46%), Gaps = 32/506 (6%)

Query: 59  SSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
           ++H+   A  L  +I+S  I+S+         H +Q  P  S  + +S+++  + D    
Sbjct: 14  NAHNPKLAWHLFKRILSLPISSN---------HRSQSIPIISRILIRSKMFNELDD---- 60

Query: 119 SRLSDQALFYFHQML--DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV---EL 173
                      HQ+L     +    ++  +L+  + KS  F+K    F   R      + 
Sbjct: 61  ----------LHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRSNFPEKQP 110

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
            +Y + +L+K C     +     +   +     SP    +  LI   C +G +E A+ LF
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+   G    + T+ +L+ G  + GL   G E   +M+  G+ P+   YN LI  +C E
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA---GIS-PN 349
           GK  +  KL D+MR   +  +V T+N+ I  LC   ++ EA R+   M++    G+  PN
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           VITY  ++ GFC  G  ++A  L + +K N    ++ +YN+ +    + G    A  +++
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM   GI P   +Y I++D   ++  +  A  +  LM ++G  PD  TY  L+HG C KG
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA+ L + M      PN    N+++    KEG    A  LL +MNEKG   +  + +
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLG 555
             I  LC +G+  +A  ++N M   G
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHG 496



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 201/434 (46%), Gaps = 25/434 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y  ++D   K+ +   A      M+ +G+ P + T+++LL  +  K   F+   L     
Sbjct: 364 YNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI 423

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 + Y+  +L+    + G +++A  +L ++ E G+  + V    +I+  C NG ++
Sbjct: 424 SNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLD 483

Query: 228 RAKMLFRKIGELGLVATQH-----------------------TYTVLICGLFKNGLQKDG 264
           +A  +   +   G  A  +                       TY+ +I GL K G   D 
Sbjct: 484 KAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDA 543

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            + + +M   G+ P    Y+  IH +C EGK+S  F++  +M  R     + TYN+LI G
Sbjct: 544 KKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILG 603

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L  + ++ E   L+D+M+  G+SP+V TYN +++  C+ G  + A  + +++   G SP+
Sbjct: 604 LGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPN 663

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           + ++ +LI+AF KA + K AS  V E+        E  YT++ +  +    + +A E++ 
Sbjct: 664 ISSFRILIKAFCKACDFK-ASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFE 722

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
                 F    + Y  LI  LC    ++ AS + + + +   + +   +  +I G+ K G
Sbjct: 723 TALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMG 782

Query: 505 NSYRALRLLGEMNE 518
           N + A  L   M E
Sbjct: 783 NKHVADELAERMME 796



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 210/473 (44%), Gaps = 62/473 (13%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           ++N  L+ +I++    + W+   E     +E D+YS+ I++ G C+ G L+ A  ++  +
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G  P+ V Y++L+ G C  G +  A  L  ++         +T  VL+  L+K G  
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRI 447

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF------------------ 303
            +     +KM   G      T N +I+  CN G++ +  ++                   
Sbjct: 448 SEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSF 507

Query: 304 -----DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
                D +  ++   ++VTY+T+I GLCK  R+ +A++   +M   G+ P+   Y+  I 
Sbjct: 508 IGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIH 567

Query: 359 GFCDAGETDKAFR-----------------------------------LFNQLKSNGQSP 383
            FC  G+   AF+                                   L ++++  G SP
Sbjct: 568 SFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSP 627

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            V TYN ++    + G    A  ++ EM ++GI+P+  ++ ILI +F ++ D + + E++
Sbjct: 628 DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687

Query: 444 SL-MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + +   G    +YT  ++ + L + G + EA +LF +  +   +  + +Y  +I   CK
Sbjct: 688 EIALNVCGHKEALYT--LMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCK 745

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +     A  +L  + +KG   + AS+   I    + G    A+ L  +M+++ 
Sbjct: 746 DEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMA 798


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 249/543 (45%), Gaps = 49/543 (9%)

Query: 61  HSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR 120
           HS +  + LI K+ + R      T + LL  +    P S        ++ +II    ++R
Sbjct: 67  HSQSTYRALIHKLCTFRRFD---TVKQLLDEM----PHSLGAPPGDDIFITIIRGLGRAR 119

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK--VELDVYSF 178
           ++   +     +      P    FNS+L  ++K    D    F+ ++     VE D Y+F
Sbjct: 120 MTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKE-DIDMAREFYRKSMMASGVEGDDYTF 178

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
           GIL+KG C    + + F++L  ++  G +PN V+Y +L+   C+NG + RA+ L  ++ +
Sbjct: 179 GILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED 238

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
              V    T+ +LI G  K G         EK    G  P + +   ++   CN G+  E
Sbjct: 239 PNDV----TFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTME 294

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             ++ + +       +VV YNTLI G C   +V+     L QM+  G  PNV TYN LI 
Sbjct: 295 AAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLIS 354

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE----- 413
           GF ++G  D A  LFN +K++G   + VT++ LIR        +    ++  MEE     
Sbjct: 355 GFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGS 414

Query: 414 RG------------------------------ITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           RG                              + P  V  +++I    +   +E A  +Y
Sbjct: 415 RGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVY 474

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G  P +  Y  L+HG   +GN++EA +L N M      P    +N +I G+C++
Sbjct: 475 DQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQ 534

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    AL+L+ ++  +G VPN  +YS  I VLC++G   +A  +  QM+  G+ P + ++
Sbjct: 535 GKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIW 594

Query: 564 NIL 566
           N L
Sbjct: 595 NSL 597



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 190/413 (46%), Gaps = 39/413 (9%)

Query: 127 FYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGC 185
           F   Q++ S GV P +  +N+LL  + ++    +     +E     + +  +F ILI G 
Sbjct: 195 FKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEME---DPNDVTFNILISGY 251

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G+  +A  +L +   MGF P+VV  T +++  C  G    A  +  ++  +G +   
Sbjct: 252 CKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDV 311

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             Y  LI G    G  K G  F ++M+  G  P++ TYN LI  +   G +     LF++
Sbjct: 312 VAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFND 371

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM------------------------ 341
           M+   +  N VT++TLI GLC E R+++   +L+ M                        
Sbjct: 372 MKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKK 431

Query: 342 -----------KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
                      KM  + P  +  + +I   C  G  + A R+++Q+   G  PS++ YN 
Sbjct: 432 NGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNC 491

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  FSK GN + A +L+ EM      P   T+  +I  F R   +E A ++   +   G
Sbjct: 492 LVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARG 551

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             P+  TY  LI  LC  G++++A ++F  M +  + P+  ++N ++    +E
Sbjct: 552 CVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 7/255 (2%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           TY  LI  LC   R    ++LLD+M  + G  P    +  +I G   A  T    ++ + 
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDL 130

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE-MEERGITPSEVTYTILIDSFVRSD 434
           +     SPS+  +N ++    K  +  MA +  R+ M   G+   + T+ IL+     ++
Sbjct: 131 VYKFHGSPSLKIFNSILDVLVKE-DIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTN 189

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            + + F++  L++  G +P+   Y  L+H LC  G +  A  L N M +    PNDV +N
Sbjct: 190 RIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFN 245

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           ++I GYCKEGNS +AL LL +    G VP++ S +  + +LC  G+  EA  +L ++  +
Sbjct: 246 ILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESM 305

Query: 555 GLKPSVSLYNILYRA 569
           G    V  YN L + 
Sbjct: 306 GGLLDVVAYNTLIKG 320



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 44/349 (12%)

Query: 261 QKDGFEFYEKMQLNGVSPSLY----TYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-NV 315
           QK   E  E  +     P+      TY  LIH+ C   +     +L DEM H   A    
Sbjct: 46  QKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGD 105

Query: 316 VTYNTLICGLCKEMRVQEAERLLD-----------------------------------Q 340
             + T+I GL +    +   ++LD                                    
Sbjct: 106 DIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKS 165

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M  +G+  +  T+  L+ G C      + F+L   +KS G +P+ V YN L+ A  + G 
Sbjct: 166 MMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGK 225

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +L+ EME+    P++VT+ ILI  + +  +  +A  +       GF PDV +   
Sbjct: 226 VGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTK 281

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           ++  LC  G   EA+++   +       + V YN +I G+C  G     L  L +M  KG
Sbjct: 282 VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKG 341

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +PN+ +Y+  I    + G    A  L N M   G+K +   ++ L R 
Sbjct: 342 CLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRG 390



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           +  +  L+ G  + G++ +A E++N++      P    + ++I G C+ G +E A  L  
Sbjct: 486 ILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVE 545

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            I   G V    TY+ LI  L +NG  +   + + +M   G+ P L+ +N L+     E 
Sbjct: 546 DITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQER 605

Query: 295 KVSE 298
             S+
Sbjct: 606 HFSK 609


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 247/532 (46%), Gaps = 11/532 (2%)

Query: 44  PQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPV 103
           P+S  I  ++  S     S     +    +I     SS F     + +  +L     N V
Sbjct: 49  PESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRL----ENRV 104

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
              + +  +  A+ K+ L ++A+  F++M  +   +P   +FNS+L  +I++   D+   
Sbjct: 105 FSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALE 164

Query: 163 FFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           F++         +  +V SF ++IK  C+ G ++ A E+  ++      P+   Y +L+D
Sbjct: 165 FYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMD 224

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G CK   I+ A  L  ++   G   +  T+ VLI GL K G      +  + M L G  P
Sbjct: 225 GLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVP 284

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  TYN LIH  C +GK+ +   L D M   +   N VTY T+I GL K+ R  +  R+L
Sbjct: 285 NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVL 344

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             M+  G   N   Y+ L+ G    G++++A RLF +    G   + V Y+ L+    + 
Sbjct: 345 VLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRD 404

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
                A  ++ EM ++G  P+  T++ L+  F    +  KA E++  M K   + +   Y
Sbjct: 405 RKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCY 464

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-- 516
            VLIHGLC  G + EA  ++  M  T   P+ V Y+ MI G C  G+   AL+L  EM  
Sbjct: 465 SVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLC 524

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            E    P++ +Y+     LC+      A  LLN ML  G  P +   NI  R
Sbjct: 525 LEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 197/470 (41%), Gaps = 58/470 (12%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           II +  K  L D A+  F +M      P + T+ +L+  + K    D+      E + + 
Sbjct: 187 IIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG 246

Query: 172 EL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
                 +F +LI G C+ GD  +  ++++ +   G  PN V Y +LI G C  G +++A 
Sbjct: 247 CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 306

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L  ++     V  + TY  +I GL K G   DG      M+  G   + Y Y+ L+   
Sbjct: 307 SLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGL 366

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
             EGK  E  +LF E   +    N V Y+ L+ GLC++ +  EA ++L +M   G +PN 
Sbjct: 367 FKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNA 426

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLK--------------------------------- 377
            T++ L+ GF + G + KA  ++  +                                  
Sbjct: 427 FTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAK 486

Query: 378 --SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME--ERGITPSEVTYTILIDSFVRS 433
             + G  P VV Y+ +I+    AG+ + A  L  EM   E    P  +TY IL ++  + 
Sbjct: 487 MLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQ 546

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND--- 490
             + +A ++ + M   G  PD+ T  + +                  M   KL+P     
Sbjct: 547 SSISRAVDLLNSMLDRGCDPDLVTCNIFLR-----------------MLREKLDPPQDGA 589

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
              + ++    K   +  A +++  M +K L P  ++++  +  LCQ  K
Sbjct: 590 KFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKK 639



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 63/250 (25%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           LY +++D   + R  D+A+    +M D G  P + TF+SL+    +  +  K    W   
Sbjct: 393 LYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDM 452

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           ++  C      YS  +LI G C+ G + +A  V  ++   G  P+VV Y+S+I G C  G
Sbjct: 453 TKINCAENEVCYS--VLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAG 510

Query: 225 DIERAKMLFRKIGELGLVATQH--TYTVLI------------------------------ 252
            +E A  L+ ++  L   +     TY +L                               
Sbjct: 511 SVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570

Query: 253 CGLFKNGLQ------KDGFEF--------------------YEKMQLNGVSPSLYTYNCL 286
           C +F   L+      +DG +F                     E M    +SP   T+  +
Sbjct: 571 CNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARV 630

Query: 287 IHEYCNEGKV 296
           +HE C   K+
Sbjct: 631 VHELCQPKKI 640


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 199/398 (50%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C   +   +  +++ G C++G ++ A  +L+++   G   N + Y SL+D   +  D  R
Sbjct: 126 CPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDAR 185

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
            + L   +   G+ AT  TYT+L+  L   G         ++M+   V+  +Y Y  +I+
Sbjct: 186 VQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVIN 245

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G V    ++FDE     +  N  TY  LI G CK  +++ AE LL  M+  G+  
Sbjct: 246 AYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I +N +IDG+C  G  D A ++   ++  G    V TYN L     +      A  L+
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLL 365

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M E+G+ P+ VTYT LI    +  DM +A  ++  M   G  P V TY V++ G   K
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++EA +    M +  L P+   Y  ++ G+C  G    AL+L  EM  +G  PN+ +Y
Sbjct: 426 GSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAY 485

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  L ++G+  EA  L + MLK GL P  SLY+ L
Sbjct: 486 TALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSAL 523



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 212/446 (47%), Gaps = 42/446 (9%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVI--KS 154
           P S +P+  S     ++D   KS   D A     +M   GVR  +  +NSLL   +  K 
Sbjct: 127 PGSVSPLAAS----VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKD 182

Query: 155 CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            +  +  L   EN   +E  V ++ IL+     AGD++K   V+++++    + +V +YT
Sbjct: 183 DARVQELLEIMEN-GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           ++I+  C+ G++ RA                                    E +++   N
Sbjct: 242 AVINAYCRAGNVRRAS-----------------------------------EVFDECVGN 266

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G+ P+  TY  LI+ +C  G++     L  +M+ R V  N + +NT+I G C++  V  A
Sbjct: 267 GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNA 326

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            ++   M+  GI  +V TYN L  G C      +A  L + +   G  P+ VTY  LI  
Sbjct: 327 LKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISI 386

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K G+   A  L REM  +G  PS VTY +++D +++   + +A      M+K G  PD
Sbjct: 387 HCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPD 446

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           VYTY  L+HG C+ G +  A KLF  M     EPN V Y  +I G  KEG S  A +L  
Sbjct: 447 VYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYD 506

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGK 540
           +M + GL P+ + YS+ +G L  D +
Sbjct: 507 DMLKAGLTPDDSLYSALVGSLHTDNR 532



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 48/110 (43%)

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           V++ G C  G + +A  L + M    +  N + YN ++  Y +  +  R   LL  M   
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENG 196

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+   + +Y+  +  L   G   + E ++++M    +   V LY  +  A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINA 246


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 229/469 (48%), Gaps = 10/469 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + SI+    K R  D+AL  F  M     +P  +T+N ++  +  +   ++ +      R
Sbjct: 354 FNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKI----R 408

Query: 169 CKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            ++EL     ++ S  I++   C+A  L +A  +     E G +PN V Y SLIDG  K 
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G I+ A  LF K+ + G  A    YT LI   F +G ++DG + Y++M   G  P L   
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N  +      G+V +G  +F++M+      +V +Y+ LI GL K  + +E   +   M  
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G + +   YN ++DG C +G+ DKA+ +  ++K     P+V TY  ++   +K      
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDE 648

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  E + +GI  + + Y+ LID F +   +++A+ +   M K G +P+VYT+  L+ 
Sbjct: 649 AYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            L     + EA   F SM E K  PN   Y+++I G C+     +A     EM ++GL+P
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP 768

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           N+ +Y++ I  L + G   +A  L  +    G  P  + +N L    +N
Sbjct: 769 NVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSN 817



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 243/539 (45%), Gaps = 43/539 (7%)

Query: 63  HAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS 122
           + A   L+  ++  R    +F     + HL    P S+        Y  +I A  ++R  
Sbjct: 141 NPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSA--------YTVLIGALAEARQP 192

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           ++AL    QM D G       F +L+  + +    +       E +   +E D+  + + 
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVC 252

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I    +AG ++ A++  ++L+  G  P+ V YTS++   CK G +  A+ LF ++     
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD 312

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY-------------------- 281
           V   + Y  +I G        D ++  E+++  G  PS+                     
Sbjct: 313 VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALT 372

Query: 282 --------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
                         TYN +I   C  G+V+E +K+ DEM    +  N+++ N ++  LCK
Sbjct: 373 LFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             +++EA R+ +     G +PN +TY  LIDG    G+ D A+RLF ++   G   + + 
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y  LIR F   G  +    + +EM  RG  P        +D   ++ ++EK   ++  M+
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             GF PDV +Y +LIHGL   G  +E S +F +M +     +   YN ++ G CK G   
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  +L EM  K + P +A+Y S +  L +  +  EA +L  +    G++ +V LY+ L
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 198/425 (46%), Gaps = 1/425 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
           ++D   K+   ++A   F    + G  P S T+ SL+  + K    D  +  F +     
Sbjct: 426 MVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            + +   +  LI+     G      ++  ++   G  P++ +  + +D   K G++E+ +
Sbjct: 486 HDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F  +   G +    +Y++LI GL K G  ++    ++ M   G +     YN ++   
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  GKV + +++ +EM+ + V   V TY +++ GL K  R+ EA  L ++ K  GI  NV
Sbjct: 606 CKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 665

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           I Y+ LIDGF   G  D+A+ +  ++   G +P+V T+N L+ A  K      A    + 
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQS 725

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+E   +P+  TY+ILI+   R     KAF  +  MQK G  P+V TY  +I GL   GN
Sbjct: 726 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGN 785

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A  LF         P+   +N +I G         A ++  E   +G   N+ +  S
Sbjct: 786 ITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCIS 845

Query: 531 TIGVL 535
            +  L
Sbjct: 846 LLDAL 850



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 162/333 (48%), Gaps = 1/333 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSE 166
           L  + +D   K+   ++    F  M   G  P   +++ L+  + K+  + +   +F + 
Sbjct: 527 LLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM 586

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++    LD  ++  ++ G C++G ++KA+EVL +++     P V  Y S++DG  K   +
Sbjct: 587 SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRL 646

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E+M   G++P++YT+N L
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       ++ E    F  M+  + + N  TY+ LI GLC+  +  +A     +M+  G+
Sbjct: 707 MDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+TY  +I G    G    A+ LF + K+NG  P   ++N LI   S A     A  
Sbjct: 767 IPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQ 826

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           +  E   RG   +  T   L+D+  +++ +E+A
Sbjct: 827 VFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 36/379 (9%)

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D+   + +  ++  LG          L+  L ++   +D F     M+     P    Y 
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI       +     +L  +M+      +V  + TL+  L +E +++ A  L+D++K +
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
            + P+++ YN  ID F  AG  D A++ F++LK++G  P  V+Y  ++    KAG    A
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300

Query: 405 SDLVREME-----------------------------------ERGITPSEVTYTILIDS 429
            +L  +ME                                   ERG  PS V++  ++  
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +   +++A  ++ +M+K    P++ TY ++I  LCM G + EA K+ + M    L PN
Sbjct: 361 LGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            +  N+M+   CK      A R+    +E+G  PN  +Y S I  L + GK  +A  L  
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479

Query: 550 QMLKLGLKPSVSLYNILYR 568
           +ML  G   +  +Y  L R
Sbjct: 480 KMLDAGHDANPIIYTSLIR 498



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           +R Y +++D   KS   D+A     +M    V P   T+ S++  + K    D+ ++ F 
Sbjct: 595 ARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFE 654

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E + K +EL+V  +  LI G  + G +++A+ +L ++ + G +PNV  + SL+D   K  
Sbjct: 655 EAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTE 714

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +I+ A + F+ + E+      +TY++LI GL +       F F+++MQ  G+ P++ TY 
Sbjct: 715 EIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYT 774

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I      G +++ + LF+  +      +  ++N LI G+    R  EA ++ ++ ++ 
Sbjct: 775 TMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLR 834

Query: 345 GISPNVITYNKLIDGF 360
           G   NV T   L+D  
Sbjct: 835 GCRLNVKTCISLLDAL 850


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 203/392 (51%), Gaps = 2/392 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++GILI   C+AG +++A   L +++ MG   ++V+YTSLI G C  G+++R K LF ++
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G      TY  LI G  K G  K+  E +E M   GV P++YTY  LI   C  GK 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  +  + M  ++   N VTYN +I  LCK+  V +A  +++ MK     P+ ITYN L
Sbjct: 334 KEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 357 IDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           + G C  G+ D+A +L   +   S+   P V++YN LI    K      A D+   + E+
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
                 VT  IL++S +++ D+ KA E++  +  S    +  TY  +I G C  G +  A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L   M  ++L+P+   YN ++   CKEG+  +A RL  EM      P++ S++  I  
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             + G    AE LL  M + GL P +  Y+ L
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 231/454 (50%), Gaps = 5/454 (1%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELD 174
           ++SR  + A  ++ +ML++       + + LL     ++   F  G L     R     +
Sbjct: 83  VRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR-GFAFN 141

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           VY+  IL+KG C   +  KA  +L ++      P+V  Y ++I G C+  ++E+A  L  
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   G   +  T+ +LI    K G   +   F ++M+  G+   L  Y  LI  +C+ G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           ++  G  LFDE+  R  +   +TYNTLI G CK  +++EA  + + M   G+ PNV TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG C  G+T +A +  N +    + P+ VTYN++I    K G    A ++V  M++R
Sbjct: 322 GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--SGFSPDVYTYGVLIHGLCMKGNMK 472
              P  +TY IL+       D+++A ++  LM K  S   PDV +Y  LIHGLC +  + 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A  +++ + E     + V  N+++    K G+  +A+ L  ++++  +V N  +Y++ I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              C+ G    A+ LL +M    L+PSV  YN L
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 3/457 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    + +  ++AL   ++M  SG      T+  L+    K+   D+   F  E +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E D+  +  LI+G C+ G+L++   + +++ E G SP  + Y +LI G CK G ++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F  + E G+    +TYT LI GL   G  K+  +    M      P+  TYN +I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIII 359

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
           ++ C +G V++  ++ + M+ R    + +TYN L+ GLC +  + EA +LL  M    + 
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+VI+YN LI G C      +A  +++ L     +   VT N+L+ +  KAG+   A 
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L +++ +  I  +  TYT +ID F ++  +  A  +   M+ S   P V+ Y  L+  L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G++ +A +LF  M      P+ V +N+MI G  K G+   A  LL  M+  GL P++
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            +YS  I    + G   EA    ++M+  G +P   +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 208/470 (44%), Gaps = 50/470 (10%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE----- 166
           +IDA  K+   D+A+ +  +M   G+      + SL+         D+G   F E     
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + C +     ++  LI+G C+ G L +A E+   + E G  PNV  YT LIDG C  G 
Sbjct: 278 DSPCAI-----TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A      + E        TY ++I  L K+GL  D  E  E M+     P   TYN 
Sbjct: 333 TKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQEAERLLD---- 339
           L+   C +G + E  KL   M         +V++YN LI GLCKE R+ +A  + D    
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452

Query: 340 -------------------------------QMKMAGISPNVITYNKLIDGFCDAGETDK 368
                                          Q+  + I  N  TY  +IDGFC  G  + 
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L  +++ +   PSV  YN L+ +  K G+   A  L  EM+     P  V++ I+ID
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             +++ D++ A  +   M ++G SPD++TY  LI+     G + EA   F+ M ++  EP
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632

Query: 489 NDVVYNMMIFGYC-KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           +  + +  +  YC  +G + +   L+ ++ +K +V +     + +  +C 
Sbjct: 633 DAHICD-SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 168/331 (50%), Gaps = 10/331 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           N VT    Y  II+   K  L   A+     M     RP + T+N LL  +      D+ 
Sbjct: 351 NAVT----YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406

Query: 161 ----WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
               +L   ++    + DV S+  LI G C+   L++A ++ + L E   + + V    L
Sbjct: 407 SKLLYLMLKDSS-YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++   K GD+ +A  L+++I +  +V    TYT +I G  K G+         KM+++ +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            PS++ YNCL+   C EG + + ++LF+EM+      +VV++N +I G  K   ++ AE 
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL  M  AG+SP++ TY+KLI+ F   G  D+A   F+++  +G  P     + +++   
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645

Query: 397 KAGNSKMASDLVREMEERGIT-PSEVTYTIL 426
             G +   ++LV+++ ++ I    E+T T++
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 15/236 (6%)

Query: 346 ISPNVITYNKLIDGFCDAG------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           ++P V  Y+KL++ F +              +   A  +F Q   +G S +    N++ +
Sbjct: 24  LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMAK 81

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
              ++ N ++A    R+M E     + V+ + L++ +V+      AF + +LM K GF+ 
Sbjct: 82  -LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +VY + +L+ GLC      +A  L   M    L P+   YN +I G+C+     +AL L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            EM   G   ++ ++   I   C+ GK  EA   L +M  +GL+  + +Y  L R 
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 94/201 (46%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           AF  + ++       + V+ + L+  + +   +  A  ++  M +RG   +   + IL+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              R+ +  KA  +   M+++   PDV++Y  +I G C    +++A +L N M  +    
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V + ++I  +CK G    A+  L EM   GL  ++  Y+S I   C  G+    + L 
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           +++L+ G  P    YN L R 
Sbjct: 271 DEVLERGDSPCAITYNTLIRG 291



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S S  V  S  Y ++ID   K+ + + A     +M  S ++P    +N LL  + K  S 
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           D+ W  F E  R     DV SF I+I G  +AGD+  A  +L  +   G SP++  Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           I+   K G ++ A   F K+ + G     H
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAH 635


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 202/411 (49%), Gaps = 20/411 (4%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           ++A     +M+  G  P ++T+  ++ F+ ++   +K +L F E  R  V  DVY++ IL
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A    +++  +G SPNVV YT+L+    K+  + +A  +F ++ +   
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY+ LI GL K G  +   E YEK  L G S                G V   F 
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEK--LIGTS----------------GNVESDF- 594

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            F+      +A NVVTY  LI GLCK  +V +A  LLD M  AG  PN I Y+ LIDGFC
Sbjct: 595 YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFC 654

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+ D A  +F ++   G  PSV TY  LI    K G   +A  ++ EM      P+ V
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT +ID   +  ++EKA  + SLM++ G SP+V TY  LI GL   G    + KLF  M
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
                 PN V Y ++I   C  G    A  LL EM       ++  Y   +
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 191/382 (50%), Gaps = 16/382 (4%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G   KAF++L ++   GF P+   YT +I   C+   +E++ +LF+++   G+    
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +TYT+LI    K GL +    ++++M+  G SP++ TY  L+H Y    ++ +   +F  
Sbjct: 488 YTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR 547

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----------------KMAGISPN 349
           M       N VTY+ LI GLCK   +Q+A  + +++                    I+PN
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY  LIDG C A +   A  L + + + G  P+ + Y+ LI  F K G    A ++  
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M + G  PS  TYT LID   +   ++ A ++ S M     +P+V TY  +I GL   G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +++A  L + M E    PN V Y  +I G  K G +  +L+L  +MN KG  PN  +Y 
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787

Query: 530 STIGVLCQDGKWPEAEVLLNQM 551
             I   C  G   EA +LL++M
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEM 809



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 226/519 (43%), Gaps = 62/519 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +I   +++ L ++A+ + H+M  +   P   T+ +LL   +K   F  GW     N
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQF--GWCKRIIN 330

Query: 168 RCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN- 223
               E    +   F  L+ G C AGD   A+++ N++   G  P  V Y   I   C   
Sbjct: 331 MMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390

Query: 224 ----------------------------------------GDIERAKMLFRKIGELGLVA 243
                                                   G  E+A  + +++   G V 
Sbjct: 391 ELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVP 450

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TYT +I  L +    +  F  +++M+  GV+P +YTY  LI  +C  G + +    F
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWF 510

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           DEMR    + NVVTY  L+    K  ++ +A  +  +M  A   PN +TY+ LIDG C A
Sbjct: 511 DEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKA 570

Query: 364 GETDKAFRLFNQL---KSNGQS-------------PSVVTYNVLIRAFSKAGNSKMASDL 407
           GE  KA  ++ +L     N +S             P+VVTY  LI    KA     A +L
Sbjct: 571 GEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHEL 630

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M   G  P+++ Y  LID F +   ++ A E++  M K G+ P V+TY  LI  +  
Sbjct: 631 LDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +  A K+ + M      PN V Y  MI G  K G   +AL LL  M EKG  PN+ +
Sbjct: 691 DGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVT 750

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y++ I  L + GK   +  L  QM   G  P+   Y +L
Sbjct: 751 YTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 238/550 (43%), Gaps = 90/550 (16%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL---- 162
           RL   ++    +  L D+AL    ++ D G RP + T+N+L+  +  +   + G+     
Sbjct: 170 RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKE 229

Query: 163 --------------FFSENRCKV---------------ELDVYSFGILIKGCCEAGDLNK 193
                         +F++  CKV                LD      +I G  EA   N+
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A   L+++      PNVV Y +L+ G  K       K +   +   G       +  L+ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE-------------------- 293
           G    G     ++ + +M   G  P    YN  I   C +                    
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 294 ---------------------GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
                                GK  + F++  EM  +    +  TY  +I  LC+  +V+
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           ++  L  +MK AG++P+V TY  LID FC AG  ++A   F++++S G SP+VVTY  L+
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSG- 450
            A+ K+     A D+   M +    P+ VTY+ LID   ++ +++KA E+Y  L+  SG 
Sbjct: 530 HAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGN 589

Query: 451 --------------FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
                          +P+V TYG LI GLC    + +A +L ++M     EPN +VY+ +
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDAL 649

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I G+CK G    A  +   M + G +P++ +Y+S I  + +DG+   A  +L++ML    
Sbjct: 650 IDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSC 709

Query: 557 KPSVSLYNIL 566
            P+V  Y  +
Sbjct: 710 NPNVVTYTAM 719



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 217/434 (50%), Gaps = 26/434 (5%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y +++ A+LKS+   QA   FH+M+D+   P + T+++L+  + K+    
Sbjct: 519 SPNVVT----YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQ 574

Query: 159 KG-----------------WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           K                  + F   + C +  +V ++G LI G C+A  ++ A E+L+ +
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G  PN ++Y +LIDG CK G I+ A+ +F ++ + G + + HTYT LI  +FK+G  
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
               +   +M  +  +P++ TY  +I      G++ +   L   M  +  + NVVTY  L
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL K  +   + +L  QM   G +PN +TY  LI+  C AG  D+A  L +++K    
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHW 814

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              +  Y+  ++ FSK   + +   L+ EME     P    Y +LIDSF ++  +E A E
Sbjct: 815 PKHLQGYHCAVQGFSKKFIASLG--LLEEMESHETVPIAPVYGMLIDSFSKAGRLETALE 872

Query: 442 MYSLMQKSGFSPDVYT---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           ++  + +   S ++ +   Y  LI  LC+   ++EA  L+  M    + P+ +V+  ++ 
Sbjct: 873 LHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVK 932

Query: 499 GYCKEGNSYRALRL 512
           G  +      AL+L
Sbjct: 933 GLIEVNKWDEALQL 946



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 175/450 (38%), Gaps = 108/450 (24%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           ++G+S     Y +L +          A+ L R+IGE      +    VL+    ++GL  
Sbjct: 127 QVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWD 186

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR------------- 309
           +  E   +++  G  PS  TYN L+    + G+V  GF++  EM                
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFA 246

Query: 310 EVACNVVTY--------------NTLIC-----GLCKEMRVQEAERLLDQMKMAGISPNV 350
           +  C V  +              +T++C     GL +     EA   L +M+     PNV
Sbjct: 247 QALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNV 306

Query: 351 ITY-----------------------------------NKLIDGFCDAGETDKAFRLFNQ 375
           +TY                                   N L+ G+C+AG+   A++LFN+
Sbjct: 307 VTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNR 366

Query: 376 LKSNGQSPSVVTYNVLI-----------------------------------------RA 394
           + + G  P  V YN+ I                                         R 
Sbjct: 367 MTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRC 426

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
               G  + A  +++EM  +G  P   TYT +I    ++  +EK+F ++  M+++G +PD
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           VYTY +LI   C  G +++A   F+ M      PN V Y  ++  Y K     +A  +  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            M +    PN  +YS+ I  LC+ G+  +A
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKA 576


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 215/467 (46%), Gaps = 8/467 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL----FF 164
           Y  +I    +  + ++A     QM D G+ P +N FN     VIK    DK W      F
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN----MVIKGLLNDKLWKDAVSLF 375

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E       D +++ ILI   C+   + +A  +  ++ E G  P +V Y SL+   C NG
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNG 435

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A  L+ ++   G      TYT L+ G          +    +M+ NGVS + YTYN
Sbjct: 436 CMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYN 495

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+  C  G+V E  ++             +TYN++I G  K   +  A  +  QM   
Sbjct: 496 TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAK 555

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI PN++TY   IDG+C     D A ++ N ++  G  P +  YN LI  F + GN   A
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             ++  M + G+ P+   Y   I  +     ME+A   Y  M K G   D  TY  LI G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG 675

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
               GN+  A KL++ M      P+ + +  +  G C+ G+   A +LL EMN   + PN
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +  Y+  I    ++GK  EA  L ++ML+  + P  + Y+IL   K+
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKS 782



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 229/468 (48%), Gaps = 35/468 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+    I +  K R +++AL    +M D+G  P   TFNS++                  
Sbjct: 213 RVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV------------------ 254

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                        +L+KG    G + +A  + ++L   G   +VV+ T+L+ G C   ++
Sbjct: 255 ------------DVLVKG----GRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  +F +    GLV T  TYTVLI G  + G+ +  +E   +M+ +G+ PS   +N +
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I    N+    +   LF EM    +  +  TYN LI  LC+  +++EA  L ++M   G+
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P ++TY+ L+  +C  G  D+A +L+ ++   G +P+VVTY  L++          A  
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM++ G++ ++ TY  LI+       + +  EM    +  GF P   TY  +I+G  
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M  A  ++  M    + PN V Y   I GYCK      AL++L ++  KGL P+IA
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +Y+S I   CQ+G    A  +L  MLK GL P++S+YN       N++
Sbjct: 598 AYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+  G     + ++ ++     EG   +  +LFDEM   E+  +    +  I  LCK  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
               A  +L +M+ AG  P   T+N ++D     G  ++A  + ++L + G+  SVV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            L+  +      + A D+  E    G+ P++VTYT+LI         EKA+E+   M+  
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P    + ++I GL      K+A  LF  M ++ + P+   YN++I   C+      A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L L  +MNE G+ P I +Y S +   C +G   EA  L  +M   G  P+V  Y  L + 
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 570 KNN 572
             N
Sbjct: 466 HIN 468



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 1/272 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G  P + T+NS++   IK+      +  + +   K +  ++ ++   I G C+    + A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++LN +   G  P++  Y SLI G C+ G++  A  +   + + GL+     Y   I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
                + ++   FYEKM   G+     TY  LI  +  +G V+   KL+ EM  +    +
Sbjct: 641 YKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            +T+  L  GLC+   + +A +LLD+M    I PNV+ YN LI+G+   G+  +AFRL +
Sbjct: 701 HITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHD 760

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           ++      P   TY++L+   S   +S + ++
Sbjct: 761 EMLERKIMPDDTTYDILVGMKSLGSDSPIDAE 792


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 235/475 (49%), Gaps = 8/475 (1%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC 155
            P   +  T + L   + D   + R+ D AL     ML    +P   T+  LL  V KS 
Sbjct: 131 MPVPPDAYTYTPLIRGLCD---RGRVGD-ALSLLDDMLRRECQPSVVTYTVLLEAVCKSS 186

Query: 156 SFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
            F +      E R K    ++ ++ ++I G C    ++ A ++LN+L   GF P+ V YT
Sbjct: 187 GFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYT 246

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +++ G C     E  ++LF ++ E   V  + T+ +L+    + G+ +   E  ++M  +
Sbjct: 247 TVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEH 306

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G + +    N +I+  C +G+V + F+  + M     + + ++Y T++ GLC+  R ++A
Sbjct: 307 GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDA 366

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           + LL++M      PN +T+N  I   C  G  D+A  L  Q+   G S  +VTYN L+  
Sbjct: 367 KELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNG 426

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G    A +L   +      P+ +TYT L+     ++ ++ A E+ + M ++    +
Sbjct: 427 FCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLN 483

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V T+ VL+   C KG ++EA +L   M E    PN + +N ++ G  ++ NS  AL LL 
Sbjct: 484 VVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH 543

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +  KG+  +  +YSS + VL ++ +  EA  + + +  +G++P   +YN +  A
Sbjct: 544 GLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 193/393 (49%), Gaps = 6/393 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVY    LI+  C  G  + A  VL   E  G   +V  Y +L+ G C+ G ++ A+   
Sbjct: 69  DVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAAR--- 125

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R I  + +    +TYT LI GL   G   D     + M      PS+ TY  L+   C  
Sbjct: 126 RLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKS 185

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
               +  K+ DEMR +    N+VTYN +I G+C+E RV +A ++L+++   G  P+ ++Y
Sbjct: 186 SGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSY 245

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             ++ G C A   +    LF ++  N   P+ VT+++L+R F + G  + A +++  M E
Sbjct: 246 TTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSE 305

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G T +     I+I+S  +   ++ AFE  + M   G SPD  +Y  ++ GLC  G  ++
Sbjct: 306 HGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWED 365

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L N M      PN+V +N  I   C++G   +A+ L+ +M E G    I +Y++ + 
Sbjct: 366 AKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVN 425

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C  G+   A  L N    L  +P+   Y  L
Sbjct: 426 GFCVQGRVDSALELFN---SLPCEPNTITYTTL 455



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 182/377 (48%), Gaps = 3/377 (0%)

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           DL +A  ++ +    G +P+V + T LI   C+ G    A  + R     G       Y 
Sbjct: 50  DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN 109

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  + G           M    V P  YTY  LI   C+ G+V +   L D+M  R
Sbjct: 110 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR 166

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           E   +VVTY  L+  +CK     +A ++LD+M+  G +PN++TYN +I+G C     D A
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++ N+L S G  P  V+Y  +++    A   +    L  EM E    P+EVT+ +L+  
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F R   +E+A E+   M + G + +     ++I+ +C +G + +A +  N+M      P+
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y  ++ G C+ G    A  LL EM  K   PN  ++++ I +LCQ G   +A +L+ 
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406

Query: 550 QMLKLGLKPSVSLYNIL 566
           QM + G    +  YN L
Sbjct: 407 QMPEYGCSVGIVTYNAL 423



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 204/417 (48%), Gaps = 8/417 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y +++     ++  +     F +M+++   P   TF+ L+ F  +    ++        S
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E+ C     + +  I+I   C+ G ++ AFE LN +   G SP+ + YT+++ G C+ G 
Sbjct: 305 EHGCTANTTLCN--IVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E AK L  ++        + T+   IC L + GL        E+M   G S  + TYN 
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ +C +G+V    +LF+ +       N +TY TL+ GLC   R+  A  LL +M    
Sbjct: 423 LVNGFCVQGRVDSALELFNSLPCEP---NTITYTTLLTGLCHAERLDAAAELLAEMMQND 479

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
              NV+T+N L+  FC  G  ++A  L  Q+  +G +P+++T+N L+   ++  NS+ A 
Sbjct: 480 CPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEAL 539

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  +  +GI+   +TY+ ++D   R D +E+A +M+  +Q  G  P    Y  ++  L
Sbjct: 540 ELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSAL 599

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           C +     A   F  M      PN+  Y ++I G  +EG    A  +L E+  +G++
Sbjct: 600 CKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 195/429 (45%), Gaps = 41/429 (9%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +DV+++  L+ G C  G L+ A  +   +  M   P+   YT LI G C  G +  A  L
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSL 159

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
              +       +  TYTVL+  + K+       +  ++M+  G +P++ TYN +I+  C 
Sbjct: 160 LDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR 219

Query: 293 EGKVSE-----------GFK------------------------LFDEMRHREVACNVVT 317
           E +V +           GF+                        LF EM       N VT
Sbjct: 220 EDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVT 279

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           ++ L+   C+   V+ A  +LD+M   G + N    N +I+  C  G  D AF   N + 
Sbjct: 280 FDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMG 339

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S G SP  ++Y  +++   +AG  + A +L+ EM  +   P+EVT+   I    +   ++
Sbjct: 340 SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID 399

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A  +   M + G S  + TY  L++G C++G +  A +LFNS+     EPN + Y  ++
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLL 456

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            G C       A  LL EM +     N+ +++  +   CQ G   EA  L+ QM++ G  
Sbjct: 457 TGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCT 516

Query: 558 PSVSLYNIL 566
           P++  +N L
Sbjct: 517 PNLITFNTL 525



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 3/307 (0%)

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +     E+    G +P +Y    LI   C  G+ S+  ++           +V  YNTL+
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C+  R+  A RL+  M    + P+  TY  LI G CD G    A  L + +      
Sbjct: 113 AGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           PSVVTY VL+ A  K+     A  ++ EM  +G TP+ VTY ++I+   R D ++ A ++
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            + +   GF PD  +Y  ++ GLC     ++   LF  M E    PN+V ++M++  +C+
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G   RA+ +L  M+E G   N    +  I  +C+ G+  +A   LN M   G  P    
Sbjct: 290 GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTIS 349

Query: 563 YNILYRA 569
           Y  + + 
Sbjct: 350 YTTVLKG 356



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            +  DD+ +A  +       G +PDVY    LI  LC +G   +A+++  +  E    P 
Sbjct: 45  LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTA-EGSGAPV 103

Query: 490 DV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           DV  YN ++ GYC+ G    A RL+  M    + P+  +Y+  I  LC  G+  +A  LL
Sbjct: 104 DVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
           + ML+   +PSV  Y +L  A
Sbjct: 161 DDMLRRECQPSVVTYTVLLEA 181


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 216/467 (46%), Gaps = 8/467 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL----FF 164
           Y  +I    +  + ++A     QM D G+ P +N FN     VIK    DK W      F
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN----MVIKGLLNDKLWKDAVSLF 375

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E       D +++ ILI   C+   + +A  +  ++ E G  P +V Y SL+   C NG
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNG 435

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ A  L+ ++   G      TYT L+ G          +    +M+ NGVS + YTYN
Sbjct: 436 CMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYN 495

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+  C  G+V E  ++             +TYN++I G  K   +  A  +  QM   
Sbjct: 496 TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAK 555

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI PN++TY   IDG+C     D A ++ N ++  G  P +  YN LI  F + GN   A
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHA 615

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             ++  M + G+ P+   Y   I  +     ME+A  +Y  M K G   D  TY  LI G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG 675

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
               GN+  A KL++ M      P+ + +  +  G C+ G+   A +LL EMN   + PN
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
           +  Y+  I    ++GK  EA  L ++ML+  + P  + Y+IL   K+
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKS 782



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 229/468 (48%), Gaps = 35/468 (7%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+    I +  K R +++AL    +M D+G  P   TFNS++                  
Sbjct: 213 RVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV------------------ 254

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                        +L+KG    G + +A  + ++L   G   +VV+ T+L+ G C   ++
Sbjct: 255 ------------DVLVKG----GRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A  +F +    GLV T  TYTVLI G  + G+ +  +E   +M+ +G+ PS   +N +
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I    N+    +   LF EM    +  +  TYN LI  LC+  +++EA  L ++M   G+
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P ++TY+ L+  +C  G  D+A +L+ ++   G +P+VVTY  L++          A  
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM++ G++ ++ TY  LI+       + +  EM    +  GF P   TY  +I+G  
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G M  A  ++  M    + PN V Y   I GYCK      AL++L ++  KGL P+IA
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +Y+S I   CQ+G    A  +L  MLK GL P++S+YN       N++
Sbjct: 598 AYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+  G     + ++ ++     EG   +  +LFDEM   E+  +    +  I  LCK  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
               A  +L +M+ AG  P   T+N ++D     G  ++A  + ++L + G+  SVV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
            L+  +      + A D+  E    G+ P++VTYT+LI         EKA+E+   M+  
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G  P    + ++I GL      K+A  LF  M ++ + P+   YN++I   C+      A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L L  +MNE G+ P I +Y S +   C +G   EA  L  +M   G  P+V  Y  L + 
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 570 KNN 572
             N
Sbjct: 466 HIN 468



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKA 194
           G  P + T+NS++   IK+      +  + +   K +  ++ ++   I G C+    + A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++LN +   G  P++  Y SLI G C+ G++  A  +   + + GL+     Y   I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
                + ++    YEKM   G+     TY  LI  +  +G V+   KL+ EM  +    +
Sbjct: 641 YKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            +T+  L  GLC+   + +A +LLD+M    I PNV+ YN LI+G+   G+  +AFRL +
Sbjct: 701 HITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHD 760

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           ++      P   TY++L+   S   +S + ++
Sbjct: 761 EMLERKIMPDDTTYDILVGMKSLGSDSPIDAE 792


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 228/463 (49%), Gaps = 9/463 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  ++   L     D A+  F  M  S   P    F+ LL  + K   FD   + F E  
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDL-VISFGE-- 102

Query: 169 CKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            K+E+     ++Y++ ILI   C    L+ A  +L ++ ++G+ P++V   SL++G C  
Sbjct: 103 -KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             I  A  L  ++ E+G      T+T LI GLF +    +     ++M   G  P L TY
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             +++  C  G       L ++M   ++  NVV Y+T+I  LCK     +A  L  +M+ 
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ PNVITY+ LI   C+ G    A RL + +     +P++VT++ LI AF K G    
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  EM +R I P+  TY+ LI+ F   D + +A +M  LM +    P+V TY  LI+
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C    + +  +LF  M +  L  N V Y  +I G+ +  +   A  +  +M   G+ P
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           NI +Y+  +  LC++GK  +A V+   + +  ++P +  YNI+
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 193/362 (53%), Gaps = 4/362 (1%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVY 176
           +R+SD A+    QM++ G +P + TF +L+  +F+    S     +     R   + D+ 
Sbjct: 162 NRISD-AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLV 219

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++G ++ G C+ GD + A  +LN++E      NVVIY+++ID  CK    + A  LF ++
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+     TY+ LI  L   G   D       M    ++P+L T++ LI  +  +GK+
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  KL++EM  R +  N+ TY++LI G C   R+ EA+++L+ M      PNV+TYN L
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+GFC A   DK   LF ++   G   + VTY  LI  F +A +   A  + ++M   G+
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P+ +TY IL+D   ++  + KA  ++  +Q+S   PD+YTY ++I G+C  G  K    
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519

Query: 477 LF 478
            F
Sbjct: 520 YF 521



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 180/331 (54%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  +F  LI G       ++A  +++++ + G  P++V Y ++++G CK GD + A  L 
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            K+    + A    Y+ +I  L K   + D    + +M+  GV P++ TY+ LI   CN 
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+ S+  +L  +M  R++  N+VT++ LI    K+ ++ +AE+L ++M    I PN+ TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + LI+GFC      +A ++   +      P+VVTYN LI  F KA       +L REM +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+  + VTYT LI  F ++ D + A  ++  M   G  P++ TY +L+ GLC  G + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           A  +F  +  + +EP+   YN+MI G CK G
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 181/370 (48%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D+ +   L+ G C    ++ A  +++Q+ EMG+ P+ V +T+LI G   +     A  
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++ + G      TY  ++ GL K G          KM+   +  ++  Y+ +I   C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
                 +   LF EM ++ V  NV+TY++LI  LC   R  +A RLL  M    I+PN++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T++ LID F   G+  KA +L+ ++      P++ TY+ LI  F        A  ++  M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             +   P+ VTY  LI+ F ++  ++K  E++  M + G   +  TY  LIHG     + 
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
             A  +F  M    + PN + YN+++ G CK G   +A+ +   +    + P+I +Y+  
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504

Query: 532 IGVLCQDGKW 541
           I  +C+ GKW
Sbjct: 505 IEGMCKAGKW 514



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 2/305 (0%)

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           F F  +   +G +   Y Y  ++    ++ ++ +   LF  M       +++ ++ L+  
Sbjct: 30  FSFCRRRAFSGKTS--YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSA 87

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           + K  +        ++M++ GIS N+ TYN LI+ FC       A  L  ++   G  P 
Sbjct: 88  IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 147

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +VT N L+  F        A  LV +M E G  P  VT+T LI      +   +A  +  
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G  PD+ TYG +++GLC +G+   A  L N M   K+E N V+Y+ +I   CK  
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL L  EM  KG+ PN+ +YSS I  LC  G+W +A  LL+ M++  + P++  ++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327

Query: 565 ILYRA 569
            L  A
Sbjct: 328 ALIDA 332



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 34/297 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID+  K R  D AL  F +M + GVRP   T++SL+     SC            
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI-----SC------------ 297

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                             C  G  + A  +L+ + E   +PN+V +++LID   K G + 
Sbjct: 298 -----------------LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A+ L+ ++ +  +     TY+ LI G        +  +  E M      P++ TYN LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +C   +V +G +LF EM  R +  N VTY TLI G  +      A+ +  QM   G+ 
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           PN++TYN L+DG C  G+  KA  +F  L+ +   P + TYN++I    KAG  KM 
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 225/455 (49%), Gaps = 18/455 (3%)

Query: 64  AAAQTLILK--IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSR--LYESIIDAHLKS 119
           +A+  ++L+   ++GR+       R  L HL  +  SSS+  T +   + + +   +  +
Sbjct: 102 SASHNILLRGFFMAGRV-------RDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSA 154

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
              +QA+ +F +M  SGV P   +++ LL  +  S    +    FS   C    D+ ++ 
Sbjct: 155 NRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP--DIMTYN 212

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L+ G C+ G   +A  ++ ++ + G+ PNV  Y+ +I+  CK   +E A  +F K+ E 
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE-GKVSE 298
             V    T+  LI G  K G+ +D  + + +M+  G   ++ TYN LI   C + G V  
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
              LF+++    +   +VTYN+LI G C   R+ EA +  D+M+    +PNVITY+ LID
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILID 391

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G C      +A +    +K++G +P+VVTY  LI  F K G  K A     +M+  G  P
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + V +  LID   +++       +   M   G  PDV TY  LI GLC    +++A +LF
Sbjct: 452 NTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 511

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           + M      PN   +N +I G C +     A  +L
Sbjct: 512 DGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 236/507 (46%), Gaps = 52/507 (10%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI---------------- 149
           +  Y  +I    K     QA+  F  M  SG+ P ++T N+LL+                
Sbjct: 32  AHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFR 91

Query: 150 ------FVIKSCSFD---KGWLFFSENRCKVEL-------------DVYSFGILIKGCC- 186
                 F+  S S +   +G  FF   R +  L                ++ +++KG C 
Sbjct: 92  EMQAGPFLPTSASHNILLRG--FFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 187 ---EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
               A  L +A E   +++  G  P++  Y  L+     +G +  A  LF     +    
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF---SAMTCSP 206

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY VL+ G  K G   +     +++   G  P+++TY+ +I+ YC   KV E +++F
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            +M       N VT+NTLI G CK   +++A +L  +M+  G    ++TYN LID  C  
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326

Query: 364 -GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A  LFN+L+  G +P++VTYN LI+ F  A     A     EME +   P+ +T
Sbjct: 327 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVIT 385

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y+ILID   +   M++A +    M+  G++P V TYG LI+G C  G +K A   F  M 
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMK 445

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                PN V++N +I G CK   +   LRLL  M+ +G  P++ +Y+  I  LC   +  
Sbjct: 446 LAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 505

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +A+ L + M      P+V+ +N L R 
Sbjct: 506 DAQRLFDGM---ACAPNVTTFNFLIRG 529



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 224/463 (48%), Gaps = 45/463 (9%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N+LL  ++ +   D+    F E    +   + +++ +LI+G C+ G +++A  V + ++ 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  PN     +L+ G C+ G +  A  LFR++     + T  ++ +L+ G F  G  +D
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 264 GF---------------------------------------EFYEKMQLNGVSPSLYTYN 284
                                                    EF+++M+ +GV P L +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+    + G+++E   LF  M     + +++TYN L+ G CK  +  EA+ L+ ++  A
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  PNV TY+ +I+ +C   + ++A+ +F ++  +   P+ VT+N LI  F KAG  + A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRS-DDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             L  EME+ G   + VTY  LIDS  +    +  A ++++ ++ +G +P + TY  LI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C    + EA + F+ M E K  PN + Y+++I G CK      A + L +M   G  P
Sbjct: 358 GFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +Y   I   C+ G+   A +   +M   G  P+  ++N L
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTL 459



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 222/439 (50%), Gaps = 14/439 (3%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL---IFVIKSCS-FDKGWLFFSENRCK-V 171
           +  R+ D AL +   M  S     + T+N +L    +  KS +  ++   FF E +   V
Sbjct: 114 MAGRVRD-ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGV 172

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D+ S+ IL+    ++G + +A  + +    M  SP+++ Y  L+DG CK G    A+ 
Sbjct: 173 EPDLESYHILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEAQS 229

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L ++I + G      TY+++I    K    ++ +E + KM  +   P+  T+N LI  +C
Sbjct: 230 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 289

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR-VQEAERLLDQMKMAGISPNV 350
             G + +  KLF EM        +VTYNTLI  LCK+   V  A  L ++++ AG++P +
Sbjct: 290 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 349

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN LI GFCDA    +A + F++++    +P+V+TY++LI    K    K A+  + +
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLED 408

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+  G TP+ VTY  LI+ F +  +++ A   +  M+ +G +P+   +  LI GLC    
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +  +L   M     +P+ + YN +I G C       A RL   M      PN+ +++ 
Sbjct: 469 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNF 525

Query: 531 TIGVLCQDGKWPEAEVLLN 549
            I  LC   K  EA  +L+
Sbjct: 526 LIRGLCAQKKVEEARNILD 544



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 109 YESIIDAHLKSRLSD-QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           Y ++ID+  K R     A+  F+++  +G+ P   T+NSL+     +    +   +F E 
Sbjct: 316 YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM 375

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K   +V ++ ILI G C+   + +A + L  ++  G++P VV Y  LI+G CK G+++
Sbjct: 376 EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELK 435

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A + F K+   G       +  LI GL K     DG      M   G  P + TYNCLI
Sbjct: 436 SALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLI 495

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
              C+  +V +  +LFD M     A NV T+N LI GLC + +V+EA  +LD
Sbjct: 496 SGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%)

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+   V +   ++A  ++  +    F+P+ +TY VLI G C  G M +A  +F+ M  + 
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L PN    N ++ G C+ G    AL+L  EM     +P  AS++  +      G+  +A 
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
             L  M K     +   YN++ + 
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKG 146


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 227/464 (48%), Gaps = 24/464 (5%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F +M    V P+  + N+LL  + K    D    FF +     ++  V+++ I+I   C+
Sbjct: 9   FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 68

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            GDL  A  +  Q++E GF+P++V Y SLIDG  K G ++    +F ++ +        T
Sbjct: 69  EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  LI    K       FEF  +M+ NG+ P++ TY+  I  +C EG + E  K F +MR
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  N  TY +LI   CK   + EA +L++++  AGI  NV+TY  L+DG C+ G   
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  +F  + + G +P+  TY  L+  F KA   + A D+++EM+E+ I P  + Y  ++
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV-----------------------LIHG 464
                   +E+A  +   +++SG + +   Y                         L+ G
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDG 368

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC     + A KLF+ M +  + P+ + Y  +I G  K GN   AL L   M E G+  +
Sbjct: 369 LCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 428

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           + +Y++ I  L   G+  +A  LL++M+  G+ P   +Y  L +
Sbjct: 429 LHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 213/422 (50%), Gaps = 13/422 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID H K  L D+ +  F QM D+   P   T+N+L+    K     K + F  E +
Sbjct: 94  YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 153

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +V ++   I   C+ G L +A +    +  +  +PN   YTSLID  CK G++ 
Sbjct: 154 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 213

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  +I + G+     TYT L+ GL + G  K+  E +  M   GV+P+  TY  L+
Sbjct: 214 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 273

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +    ++     +  EM+ + +  +++ Y T++ GLC E R++EA+ L+ ++K +GI+
Sbjct: 274 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 333

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y  L+D +  +G+  +A  L  ++              L+    K    ++A  L
Sbjct: 334 TNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKL 381

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM ++G+ P ++ YT LID  ++  ++++A  +   M + G   D++ Y  LI GL  
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 441

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +++A  L + M    + P++VVY  +I  Y   G    AL L  EM ++G++  ++ 
Sbjct: 442 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSD 501

Query: 528 YS 529
           ++
Sbjct: 502 HA 503



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 182/344 (52%)

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E A   F K+ +  +     +   L+  L K G      +F++ M   G+  S++TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I   C EG +     LF +M+      ++VTYN+LI G  K   + E   + +QMK A 
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+VITYN LI+ FC      KAF   +++K+NG  P+VVTY+  I AF K G  + A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
               +M    +TP+E TYT LID+  ++ ++ +A ++   + ++G   +V TY  L+ GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G MKEA ++F +M    + PN   Y  ++ G+ K      A  +L EM EK + P++
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             Y + +  LC + +  EA++L+ ++ + G+  +  +Y  L  A
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDA 345


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 186/382 (48%), Gaps = 1/382 (0%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG L+  CC  G + +   +L  +   GFS +    T ++   C+ G  +     FR++ 
Sbjct: 76  FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G       YT  I GL K    K  F   E+M   G+ P++YT+  LI   C  G   
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 195

Query: 298 EGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
             F+LF ++ +      NV TY  +I G C+E ++  AE LL +M   G+ PN  TY  L
Sbjct: 196 RAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTL 255

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C  G  D+AF L N++K  G  P++ TYN +I  F K G  + A  ++R    +G+
Sbjct: 256 IGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 315

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
              ++TYTILI    +   +  A +++  M ++G  PD+  Y  LI   C +  M+E+ K
Sbjct: 316 KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQK 375

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            F+      L P    Y  MI GYCK G S  ALR+   M + G   +  +Y + I  LC
Sbjct: 376 FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLC 435

Query: 537 QDGKWPEAEVLLNQMLKLGLKP 558
           ++ +  EA+ L   ML   L P
Sbjct: 436 KESRLEEAKALYEGMLDKRLVP 457



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 184/379 (48%), Gaps = 36/379 (9%)

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           E G    A +V + +   G SP    + +L+  CC+ G +E    L   +   G      
Sbjct: 50  ETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNA 109

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T TV++  L + G  KD  EF+ +M   G  P                            
Sbjct: 110 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPP---------------------------- 141

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                  NVV Y   I GLCK   V++A  +L++M   G+ PNV T+  LIDG C  G T
Sbjct: 142 -------NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 194

Query: 367 DKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           ++AFRLF +L KS+   P+V TY V+I  + + G    A  L+  M E+G+ P+  TYT 
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 254

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI    +    ++AFE+ + M++ GF P++YTY  +I G C KG ++EA K+        
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 314

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L+ + + Y ++I  +CK+G+   AL L   M E G  P+I +Y+S I   CQ  +  E++
Sbjct: 315 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 374

Query: 546 VLLNQMLKLGLKPSVSLYN 564
              ++ L +GL P+   Y 
Sbjct: 375 KFFDKCLMIGLLPTKQTYT 393



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 200/434 (46%), Gaps = 37/434 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCE 187
           F  M  +GV P +  F +L++   +    ++   L  +  R    LD  +  ++++  CE
Sbjct: 61  FDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 120

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G      E   ++ E G  PNVV YT+ IDG CK   +++A  +  ++   GL    +T
Sbjct: 121 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 180

Query: 248 YTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +T LI GL K G  +  F  + K+ + +   P+++TY  +I  YC EGK++    L   M
Sbjct: 181 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 240

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + +  N  TY TLI G CK      A  L+++MK  G  PN+ TYN +IDGFC  G+ 
Sbjct: 241 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 300

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A+++     S G     +TY +LI    K G+   A DL   M E G  P    YT L
Sbjct: 301 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 360

Query: 427 IDSFVRSDDMEK-----------------------------------AFEMYSLMQKSGF 451
           I ++ +   ME+                                   A  ++  M ++G 
Sbjct: 361 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             D  TYG LI GLC +  ++EA  L+  M + +L P +V    + F YC+   +  A+ 
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 480

Query: 512 LLGEMNEKGLVPNI 525
           +L  ++++  V  +
Sbjct: 481 VLDRLDKRQQVHTV 494



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 9/413 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y + ID   K R   QA     +M+  G++P   T  +L+  + K    ++ +  F +  
Sbjct: 146 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 205

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                + +V+++ ++I G C  G L +A  +L ++ E G  PN   YT+LI G CK G  
Sbjct: 206 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 265

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           +RA  L  K+ + G +   +TY  +I G  K G  ++ ++        G+     TY  L
Sbjct: 266 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 325

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I E+C +G ++    LFD M       ++  Y +LI   C++ +++E+++  D+  M G+
Sbjct: 326 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 385

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P   TY  +I G+C  G +  A R+F ++  NG     +TY  LI    K    + A  
Sbjct: 386 LPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKA 445

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M ++ + P EVT   L   + R +    A  +   + K      V+T  V++  L 
Sbjct: 446 LYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLS 502

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
             G++  AS     + +     +   Y   I   C E N Y    L  EM+EK
Sbjct: 503 ALGDVDAASLFLKKVLDEDYAVDHATYTGFI-NSCYENNRY---ALASEMSEK 551



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 145/298 (48%), Gaps = 1/298 (0%)

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M+ +G+   + T N ++      G      K+FD M    V+     +  L+   C+E 
Sbjct: 28  EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREG 87

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +V+E + LL  M   G S +  T   ++   C+ G        F ++   G  P+VV Y 
Sbjct: 88  KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 147

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY-SLMQK 448
             I    K    K A  ++ EM  RG+ P+  T+T LID   +    E+AF ++  L++ 
Sbjct: 148 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 207

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           S + P+V+TY V+I G C +G +  A  L   M E  L+PN   Y  +I G+CK G+  R
Sbjct: 208 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 267

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L+ +M ++G +PNI +Y++ I   C+ GK  EA  +L      GLK     Y IL
Sbjct: 268 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 325



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 36/247 (14%)

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           ++  F +AG   +A  +  +++S+G    V T N ++R   + G+   A  +   M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           ++P    +  L+    R   +E+   + + M + GFS D  T  V++  LC KG  K+ S
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-------------- 521
           + F  M ET   PN V Y   I G CK     +A  +L EM  +GL              
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 522 ----------------------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
                                  PN+ +Y+  IG  C++GK   AE+LL +M++ GLKP+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 560 VSLYNIL 566
            + Y  L
Sbjct: 249 TNTYTTL 255


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 202/392 (51%), Gaps = 5/392 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    K+   D AL     M+  G  P   T + L+  + K+    +   F      K
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438

Query: 171 VELDVYS---FGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDI 226
           +     S   +  L+   C+A  +++AF + + +  E  F P+VV Y+ LIDG CK  ++
Sbjct: 439 ISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDEL 498

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA+ L++++ +L  V    TY   + GL + G   D    YE+M   G SP + TY+ L
Sbjct: 499 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTL 558

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +    K  +  +LF+ M  R    N VTYN L+ GLCKE +  EA  L  +M   G 
Sbjct: 559 IHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 618

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY  L+ GFC+ G+ ++A  +F+++ S G  P VV YN L++ F +AG    A  
Sbjct: 619 DPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQ 678

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGL 465
           L + M  R   P  V++ I+ID   ++  ++ A E++  M Q  G SPD+ TY  LI GL
Sbjct: 679 LFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           C +  + EA K+F  +   KL P+   +N+++
Sbjct: 739 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 263/586 (44%), Gaps = 74/586 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKIISGRITSSSFTP 85
           +A + F W   +  +H           LL K+  H     A  +  K+++  +  + FT 
Sbjct: 112 EALTFFRWLQARNFKHD----VFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFT- 166

Query: 86  RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                                  Y  ++ +    R SD+A+ +F +M+D G +P S  + 
Sbjct: 167 -----------------------YAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQ 203

Query: 146 -----------------------------------SLLI-FVIKSCSFDKGWLFFS--EN 167
                                              +LL+ FVI+  + +   LF +  ++
Sbjct: 204 KVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKS 263

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP-NVVIYTSLIDGCCKNGDI 226
            CK +  +YS+ +L    C+  +L++AF++  ++     +P N V +T+ + G CK+G I
Sbjct: 264 GCKPDATIYSYMVLAH--CKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKI 321

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A    R + E  L ++Q  Y +LI  L ++G      E   ++    + PS  T + +
Sbjct: 322 EQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV 380

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMA 344
           I E C  G+V     L + M  R    ++ T++ LI  LCK  ++QEA+  L  M  K++
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRAFSKAGNSKM 403
             S +  +YN L++  C A +  +AF +F+ + S     P VV+Y++LI  F K      
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L ++M +    P+  TY   ++  +R   +  A  +Y  M  +G SPDV TY  LIH
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G  +     +A +LF +M      PN V YN ++ G CKE     A  L  +M E+G  P
Sbjct: 561 GFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 620

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  +Y++ +   C  GK  +A  + ++M+  G  P V  YN L + 
Sbjct: 621 DRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 8/395 (2%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF----RKI 236
           +I+  C+AG ++ A  +L  + + G+ P++  ++ LI+  CK   I+ A+       RKI
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGK 295
                 ++  +Y  L+  L K       F  +  M       P + +Y+ LI  +C   +
Sbjct: 440 --SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDE 497

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +    KL+ +M       NV TYN  + GL ++ R+ +A+ + ++M  AG SP+VITY+ 
Sbjct: 498 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI GF  A + D+A  LF  + S G  P+ VTYN L+    K      A +L R+M ERG
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 617

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  VTYT L+  F     +E+A E++  M   G  PDV  Y  L+ G    G   EA 
Sbjct: 618 CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAK 677

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGV 534
           +LF  M   + +P+ V +N+MI G  K      A+ +   M  + G  P++ +Y+S I  
Sbjct: 678 QLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 737

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC + +  EA  +  ++ +L L P    +N+L  A
Sbjct: 738 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 176/426 (41%), Gaps = 41/426 (9%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           + G +IK   + G+   A      L+   F  +V  Y  L+D   ++ D+++A  +F K+
Sbjct: 99  TVGAVIKHLRDGGE---ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+V    TY VL+          +   F+ +M   G  PS   Y  +       GK 
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  ++F     + VA  ++    L+     + +  EA +L   M  +G  P+   Y+ +
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYM 275

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSP--------------------------------- 383
           +   C     D+AF+LF ++    ++P                                 
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESL 335

Query: 384 --SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
             S   Y++LIR   ++G    A +   E+  R I PS  T   +I    ++  ++ A  
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE--TKLEPNDVVYNMMIFG 499
           +   M K G+ PD+ T+ +LI+ LC    ++EA +    M    +    +   YN ++  
Sbjct: 396 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNS 455

Query: 500 YCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
            CK    ++A  +   M +E+  VP++ SYS  I   C+  +   AE L  QM+ L   P
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 559 SVSLYN 564
           +V+ YN
Sbjct: 516 NVTTYN 521



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 5/199 (2%)

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K +G+S    T   +I+     G    A    R ++ R       TY  L+D  +R  D+
Sbjct: 89  KWDGKSSCRETVGAVIKHLRDGGE---ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDL 145

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++A +++  M   G  P+ +TY VL+   C + N  EA + F  M +   +P+  +Y  +
Sbjct: 146 KQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV 205

Query: 497 IFGYCKEGNSYRALRLLG-EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
                  G      R+ G ++ ++  V  +   +  +  + QD K  EA  L   M+K G
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQD-KAIEASKLFRAMVKSG 264

Query: 556 LKPSVSLYNILYRAKNNIE 574
            KP  ++Y+ +  A   +E
Sbjct: 265 CKPDATIYSYMVLAHCKLE 283


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 205/400 (51%), Gaps = 2/400 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E  V +   LI G C  G++ +A  +++ +E+M +  +V  Y  LI+G CK GD   A 
Sbjct: 143 LEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAV 202

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
              RK+ E         Y+ ++ GL K+GL  +      +M   GV P+L TY CLI   
Sbjct: 203 EWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGL 262

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           CN G+  E   L DEM    +  ++ T N L+   CKE +V +A+ ++  M + G  P+V
Sbjct: 263 CNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDV 322

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN LI  +C   + ++A R+F+ + S G  P +V +  LI  + K  N      L+ E
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEE 382

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G  P  VT+T LI  F ++     A E++  M K G  P++ T  V++ GLC KGN
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLC-KGN 441

Query: 471 -MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA  L  +M ++ L+ N V+Y++++ G C  G    A  L   +  KGL  N+ +Y+
Sbjct: 442 LLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYT 501

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             I  LC+ G   +AE LL  M + G  P    YN+  + 
Sbjct: 502 IMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQG 541



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 198/403 (49%), Gaps = 35/403 (8%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +  LDVY++G+LI G C+ GD   A E L ++EE  + PNVV+Y++++DG CK+G + 
Sbjct: 175 KMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVS 234

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK----------------- 270
            A  L  ++   G+     TY  LI GL   G  K+     ++                 
Sbjct: 235 EALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILV 294

Query: 271 ------------------MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                             M L G  P ++TYN LIH YC + K++E  ++F  M  R   
Sbjct: 295 DAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCL 354

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++V + +LI G CK+  + +   LL++M   G  P+V+T+  LI GFC AG    A  L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKEL 414

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F  +   GQ P++ T  V++    K      A  L   ME+  +  + V Y+IL+D    
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCS 474

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  +  A+E++S +   G   +VYTY ++I GLC +G++ +A  L  +M E    P++  
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCT 534

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           YN+ + G   +    R+++ L  M +KG   + A+   TI  L
Sbjct: 535 YNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYL 577



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----GWLF 163
           +Y +I+D   K  L  +AL    +M   GVRP   T+  L+  +   C+F +    G L 
Sbjct: 219 VYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGL---CNFGRWKETGSLL 275

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               +  + LD+ +  IL+   C+ G + +A  V+  +   G  P+V  Y SLI   C  
Sbjct: 276 DEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQ 335

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +  A  +F  +   G +     +T LI G  K+          E+M   G  P + T+
Sbjct: 336 NKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTW 395

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI  +C  G+     +LF  M       N+ T   ++ GLCK   + EA  L + M+ 
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEK 455

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + +  N++ Y+ L+DG C AG+ + A+ LF+ L   G   +V TY ++I+   K G+   
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDK 515

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL+  MEE G  P   TY + +   +   ++ ++ +  ++M+  GFS D  T  + I+
Sbjct: 516 AEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITIN 575

Query: 464 GL 465
            L
Sbjct: 576 YL 577



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 4/249 (1%)

Query: 325 LCKEMRVQEAERLLDQMK-MAGISP--NVITYNKLIDGFCDAGETDKAFRLFNQLKSN-G 380
           LCK  +V+  +  LD  + MA + P  +V  +  L+           A  L   + S+ G
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
                +T N++I    +         ++  M + G+ P+ +T T LI+      ++ +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M+K  +  DVYTYGVLI+GLC  G+   A +    M E   +PN VVY+ ++ G 
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK+G    AL L  EM+ KG+ PN+ +Y+  I  LC  G+W E   LL++M+K+G++  +
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 561 SLYNILYRA 569
              NIL  A
Sbjct: 288 QTLNILVDA 296



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 1/286 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCK 170
           ++DA  K     QA      M+ +G  P   T+NSL+ I+ +++   +   +F       
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
              D+  F  LI G C+  ++NK   +L ++ +MGF P+VV +T+LI G C+ G    AK
Sbjct: 353 CLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAK 412

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF  + + G V    T  V++ GL K  L  +     E M+ + +  ++  Y+ L+   
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGM 472

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ GK++  ++LF  +  + +  NV TY  +I GLCK+  + +AE LL  M+  G  P+ 
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDN 532

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
            TYN  + G     E  ++ +    ++  G S    T  + I   S
Sbjct: 533 CTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLS 578


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 3/384 (0%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  V + +   G +P+    T+L+    +      A+ +F ++   GL AT H Y  +
Sbjct: 125 HDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAM 184

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K G          +M   GV+   ++YN +I  YC +G   E     D M    +
Sbjct: 185 LHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGI 244

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             + VT+N+ I GLCKE RV+EA +L  +M  A  +P+ +TY  LIDG+C AG  ++A +
Sbjct: 245 RPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVK 304

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++++ G  P V TYN ++R   + GN K    L+ EM+ R +    VT   LI+++ 
Sbjct: 305 LRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYC 364

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  DM  A ++   M +SG   + +TY  LIHG C    +  A + F  M +    PN  
Sbjct: 365 KRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYS 424

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           V++ ++ G+CK+ N+   L +  E+ ++GL P+ A Y S I  LC+ G   +A+ + +QM
Sbjct: 425 VFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQM 484

Query: 552 LKLGLKPSVSLYNIL---YRAKNN 572
              GL     +Y  L   Y  K N
Sbjct: 485 QSKGLVGDSLVYATLAYTYLTKGN 508



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 1/421 (0%)

Query: 147 LLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
           L++ + +S         F   R + +  D ++   L+     A     A  V +++   G
Sbjct: 114 LVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 173

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
            +    +Y +++  C K GD  +A+ +  ++   G+   + +Y  +I    + G+  +  
Sbjct: 174 LAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAM 233

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              ++M   G+ P   T+N  IH  C EG+V E  +LF EM   +   + VTY TLI G 
Sbjct: 234 CARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGY 293

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C+   V+EA +L  +M+ AG+ P V TYN ++   C+ G   +  RL +++         
Sbjct: 294 CRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADH 353

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VT N LI A+ K G+   A  + ++M E G+  +  TY  LI  F ++ +++ A E +  
Sbjct: 354 VTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQ 413

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M  +GFSP+   +  L+ G C K N      + + + +  L P+  VY  +I   C++G 
Sbjct: 414 MVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGL 473

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             +A R+  +M  KGLV +   Y++        G    A   L+ M K  L  +  +YN 
Sbjct: 474 VDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYITPQIYNC 533

Query: 566 L 566
           L
Sbjct: 534 L 534



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 3/413 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRC 169
           +++ A  ++R++  A   F +M  +G+   ++ +N++L   +K+    +     +  +  
Sbjct: 148 ALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAA 207

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            V LD +S+  +I   C  G   +A    +++++ G  P+ V + S I G CK G ++ A
Sbjct: 208 GVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEA 267

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             LF ++          TYT LI G  + G  ++  +   +M+  G+ P + TYN ++ +
Sbjct: 268 AQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRK 327

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
            C +G + E  +L  EM  R+V  + VT NTLI   CK   +  A ++  +M  +G+  N
Sbjct: 328 LCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLN 387

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             TY  LI GFC A E D A   F Q+   G SP+   ++ L+  F K  N+     +  
Sbjct: 388 HFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPD 447

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E+ +RG+ P +  Y  LI    R   +++A  ++  MQ  G   D   Y  L +    KG
Sbjct: 448 ELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKG 507

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           N   A    + M + +L     +YN +   Y  E  +   L +     E+GL+
Sbjct: 508 NPTAALNTLDGMTKNQLYITPQIYNCLCTSYADEKETLNMLWV--RAIERGLI 558



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 3/335 (0%)

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           A  H  + L+  L ++    D    ++ M+  G++P  +    L+         +   ++
Sbjct: 106 AGPHVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRV 165

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FDEM    +A     YN ++    K     +AE ++ +M  AG++ +  +YN +I  +C 
Sbjct: 166 FDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCR 225

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G   +A    +++   G  P  VT+N  I    K G  K A+ L  EM     TP  VT
Sbjct: 226 KGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVT 285

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           YT LID + R+ ++E+A ++   M+ +G  P V TY  ++  LC  GNMKE  +L + M 
Sbjct: 286 YTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMD 345

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
             K++ + V  N +I  YCK G+   A ++  +M E GL  N  +Y + I   C+  +  
Sbjct: 346 GRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELD 405

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
            A+    QM+  G  P+ S+++ L   +  KNN +
Sbjct: 406 GAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNAD 440


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 204/398 (51%), Gaps = 7/398 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+GIL++G C+AG+  +A E+L++++  G  PNVVI+T++I G C  G + +A + FR+I
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           GE       +TY++L+  L K+G   + +    +M   G SP++ TYN LI  +    ++
Sbjct: 92  GE-DCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  EM  R    +V+TY  ++   CK   + EA RLL+ ++      NV+TYN L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSL 206

Query: 357 IDGFCDA--GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
                 A    T +A  L  ++   G  P+ V Y  ++    K      A  ++  M  +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G    +V+Y IL+ +F  +     + E+   M  SG+  D  T  V+IH  C  G++ EA
Sbjct: 267 GCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF SM +    P++V YN +I  +CK      A++LL +M +    PN+ +Y+S I  
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            C++ +  EA  +   M+  G  P    Y  L  +KN+
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTLKISKND 424



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 36/343 (10%)

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            + G+EFY    L   + +  +Y  L+  +C  G+  +  +L DEM+   V  NVV + T
Sbjct: 11  HRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTT 70

Query: 321 LICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           +I GLC   +V +A  LL   ++    +PNV TY+ L+D  C +G+  +A+ L  ++   
Sbjct: 71  IIRGLCTAGKVSQA--LLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKK 128

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+VVTYN LI  F K         L++EM +RG     +TYT+++D F +++ +++A
Sbjct: 129 GCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA 188

Query: 440 F------------------------------EMYSLMQK---SGFSPDVYTYGVLIHGLC 466
           +                              E  SL++K    G  P+   Y  ++  LC
Sbjct: 189 YRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLC 248

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + EA ++  SM+    + +DV Y +++  +   G +Y +L LLG M   G + +  
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTK 308

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +  I   C+ G   EA  L   M + G  PS   YN L  A
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGA 351



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 133/299 (44%), Gaps = 17/299 (5%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++ID   K    D+ L    +M   G R    T+  +L    K+ S D
Sbjct: 131 SPNVVT----YNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSID 186

Query: 159 KGWLFFS--ENRCKVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEM---GFSPNVVI 212
           + +   +  E R     +V ++  L      A GD  +  E L+ LE+M   G  PN V 
Sbjct: 187 EAYRLLNALEKR-----NVVTYNSLFTALSTAEGD--RTTEALSLLEKMIQEGTRPNQVN 239

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y +++   CKN  ++ A  +   +   G      +Y +L+      G   D  E   +M 
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRML 299

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +G      T N +IH++C  G + E  +LF  M  R    + VTYNTLI   CK  +  
Sbjct: 300 GSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPD 359

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            A +LL QM  A   PNVITYN +I  FC     ++A  +F  +  +G  P  V+Y  L
Sbjct: 360 TAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F D+      +  +        + + V+Y +L++ F KAG  + A +L+ EM+  G+ P+
Sbjct: 5   FVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V +T +I     +  + +A   +  + +   +P+VYTY +L+  LC  G   EA  L  
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSILVDALCKSGQPHEAYGLVT 123

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    PN V YN +I G+ K       L LL EM+++G   ++ +Y+  + + C++ 
Sbjct: 124 EMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNN 183

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              EA  LLN +     K +V  YN L+ A +  E
Sbjct: 184 SIDEAYRLLNAL----EKRNVVTYNSLFTALSTAE 214



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++  FV S      +E Y       ++ +  +YG+L+ G C  G  ++A +L + M    
Sbjct: 1   MLQIFVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG 60

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRAL---RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
           + PN V++  +I G C  G   +AL   R +GE       PN+ +YS  +  LC+ G+  
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE----DCAPNVYTYSILVDALCKSGQPH 116

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           EA  L+ +M+K G  P+V  YN L
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNAL 140


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 1/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCE 187
           F  M+  G RP + TFN+++    +      G  L     +     DV +F ILI  CC 
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G    A + L+ +   G  P+V  +T+++   C+ G++  A+ LF  I ++G+      
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ G FK          YE+M+  GVSP   T+N L+  +   G++ +  +L  ++ 
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  +   Y+ ++  LC   R+ EA +LL ++   G++ +V+ +N LI  +  AG  D
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF  +  +   G +PS  T N L+    + G  + A  L+  M E+G   ++V YT+L+
Sbjct: 475 KAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLL 534

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D + + +++E A  ++  M++ G  PD   +  LI GL   GN++EA ++F  M      
Sbjct: 535 DGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFV 594

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN+  YN +I G C  G    AL+L  EM +KGL+ +  +++  I   C+ G+   A   
Sbjct: 595 PNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIET 654

Query: 548 LNQMLKLGLKPSVSLYNIL 566
              M ++GL P +  +NIL
Sbjct: 655 FLDMQRIGLLPDIFTFNIL 673



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 216/439 (49%), Gaps = 2/439 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
           F  + D G+ P +  +N+L+    K+    +  L + E R   V  D  +F IL+ G  +
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK 399

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G +  +  +L  L   G   +  +Y  ++   C  G ++ A  L +++ E GL  +   
Sbjct: 400 YGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA 459

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           +  LI    + GL+   FE Y  M   G +PS  T N L+   C +G + E   L   M 
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRML 519

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            +    N V Y  L+ G  K   ++ A+ L  +MK  GI P+ + +  LIDG   AG  +
Sbjct: 520 EKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVE 579

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A+ +F ++ + G  P+   YN LIR     G    A  L +EM ++G+     T+ I+I
Sbjct: 580 EAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D F R   M+ A E +  MQ+ G  PD++T+ +LI G C   +M  A ++ N M+   L+
Sbjct: 640 DGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLD 699

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+   YN  + GYC+     +A+ +L ++   G+VP+  +Y++ +  +C D     A +L
Sbjct: 700 PDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMIL 758

Query: 548 LNQMLKLGLKPSVSLYNIL 566
             ++LK+G  P+V   N+L
Sbjct: 759 TAKLLKMGFIPNVITTNML 777



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 3/449 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFF 164
           + +Y +++D + K+R   QA   + +M  +GV P   TFN L+    K     D   L  
Sbjct: 352 AAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLK 411

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                 + LD   + +++   C AG L++A ++L +L E G + +VV + SLI    + G
Sbjct: 412 DLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             ++A   +R +   G   +  T   L+ GL + G  ++      +M   G   +   Y 
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT 531

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+  Y     +     L+ EM+ R +  + V +  LI GL K   V+EA  +  +M   
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  PN   YN LI G CD G   +A +L  +++  G      T+N++I  F + G  K A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +   +M+  G+ P   T+ ILI  + ++ DM  A E+ + M   G  PD+ TY   +HG
Sbjct: 652 IETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHG 711

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C    M +A  + + +    + P+ V YN M+ G C +    RA+ L  ++ + G +PN
Sbjct: 712 YCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILD-RAMILTAKLLKMGFIPN 770

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + + +  +   C+ G  PE  ++  Q L+
Sbjct: 771 VITTNMLLSHFCKQGM-PEKALIWGQKLR 798



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 188/381 (49%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           GD    +++   +   G  P+ + + ++I G C+   +   + L   + +        T+
Sbjct: 226 GDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTF 285

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            +LI      G      ++   M  +GV PS+ T+  ++H  C EG V E  KLFD ++ 
Sbjct: 286 NILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQD 345

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +A N   YNTL+ G  K   V +A  L ++M+  G+SP+ +T+N L+ G    G  + 
Sbjct: 346 MGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIED 405

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           + RL   L  +G       Y+V++ +   AG    A  L++E+ E+G+T S V +  LI 
Sbjct: 406 SDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIG 465

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           ++ R+   +KAFE Y +M + GF+P   T   L+ GLC KG ++EA  L   M E     
Sbjct: 466 AYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPI 525

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N V Y +++ GY K  N   A  L  EM E+G+ P+  ++++ I  L + G   EA  + 
Sbjct: 526 NKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVF 585

Query: 549 NQMLKLGLKPSVSLYNILYRA 569
            +M  +G  P+   YN L R 
Sbjct: 586 LEMSAIGFVPNNFAYNSLIRG 606



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 213/427 (49%), Gaps = 11/427 (2%)

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           GRI  S    + L+  ++ LF  SS       LY+ ++ +   +   D+A+    ++L+ 
Sbjct: 401 GRIEDSDRLLKDLI--VSGLFLDSS-------LYDVMVSSLCWAGRLDEAMKLLQELLEK 451

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G+      FNSL+    ++   DK +  +    RC       +   L+ G C  G L +A
Sbjct: 452 GLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEA 511

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +L ++ E GF  N V YT L+DG  K  ++E A+ L++++ E G+      +T LI G
Sbjct: 512 RILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDG 571

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K G  ++ +E + +M   G  P+ + YN LI   C+ G+V+E  KL  EMR + +  +
Sbjct: 572 LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSD 631

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
             T+N +I G C+  +++ A      M+  G+ P++ T+N LI G+C A +   A  + N
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++ S G  P + TYN  +  + +      A  ++ ++   GI P  VTY  ++ S + SD
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTML-SGICSD 750

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            +++A  + + + K GF P+V T  +L+   C +G  ++A      + E     +++ Y 
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYR 810

Query: 495 MMIFGYC 501
           ++   YC
Sbjct: 811 ILDQAYC 817



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 158/316 (50%)

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ G    G+  +  E    M+  GV P L +   L+      G     +KLF +M  + 
Sbjct: 183 LLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKG 242

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              + +T+N +ICG C++ RV   E LL  M     SP+V+T+N LI+  C  G T  A 
Sbjct: 243 PRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAI 302

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
              + +  +G  PSV T+  ++ A  + GN   A  L   +++ GI P+   Y  L+D +
Sbjct: 303 DWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGY 362

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            ++ ++ +A  +Y  M+ +G SPD  T+ +L+ G    G ++++ +L   +  + L  + 
Sbjct: 363 FKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDS 422

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
            +Y++M+   C  G    A++LL E+ EKGL  ++ +++S IG   + G   +A      
Sbjct: 423 SLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRI 482

Query: 551 MLKLGLKPSVSLYNIL 566
           M++ G  PS S  N L
Sbjct: 483 MVRCGFTPSSSTCNSL 498



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 48/371 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL------ 162
           + S+I A+ ++ L D+A   +  M+  G  P S+T NSLL+ + +     KGWL      
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCR-----KGWLQEARIL 514

Query: 163 ----------------------FFSENRCK-------------VELDVYSFGILIKGCCE 187
                                 +F  N  +             +  D  +F  LI G  +
Sbjct: 515 LYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSK 574

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
           AG++ +A+EV  ++  +GF PN   Y SLI G C  G +  A  L +++ + GL++   T
Sbjct: 575 AGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFT 634

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           + ++I G  + G  K   E +  MQ  G+ P ++T+N LI  YC    +    ++ ++M 
Sbjct: 635 FNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMY 694

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  ++ TYNT + G C+  ++ +A  +LDQ+  AGI P+ +TYN ++ G C +   D
Sbjct: 695 SCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILD 753

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +A  L  +L   G  P+V+T N+L+  F K G  + A    +++ E      E++Y IL 
Sbjct: 754 RAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILD 813

Query: 428 DSF-VRSDDME 437
            ++ +  DD+E
Sbjct: 814 QAYCLMQDDVE 824


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 205/398 (51%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C   +   S  +++ G C++G +  A ++L+++   G   N + Y SL+D   +  D +R
Sbjct: 61  CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDR 120

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              + + +   G+  T  TYT+L+ GL            +E+M+   +S  +Y Y+ +I+
Sbjct: 121 VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVIN 180

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G V    ++FDE     +  N  TY  LI G CK  +++ AE L+  M++ G+  
Sbjct: 181 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 240

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I +N +IDG+C     DKA  +   ++  G    V TYN L     +A     A +L+
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R M E+G+ P+ V+YT LI       DM +A  ++  M  +G  P + TY V++ G   K
Sbjct: 301 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 360

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++EA +  N M +  L P+   Y  ++ G+C  G    ALRL  EM ++G  PN+ +Y
Sbjct: 361 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 420

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  L ++G+  EA  L + ML  GL P  +LY+ L
Sbjct: 421 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 458



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 207/457 (45%), Gaps = 38/457 (8%)

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
           T   LL       P S  P++ S     ++D + KS     A     +M   GV+  +  
Sbjct: 49  TAADLLKQAATSCPDSVTPLSAS----VVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 104

Query: 144 FNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           +NSLL                         D Y+            D ++  E+L  +E 
Sbjct: 105 YNSLL-------------------------DAYT---------REKDDDRVAEMLKVMEN 130

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P V  YT L+DG     DI + + +F ++    L    + Y+ +I    + G  + 
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E +++   NG+ P+ +TY  LI+ +C  G++     L  +M+ R V  N + +NT+I 
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G C++  V +A  +   M+  GI  +V TYN L  G   A   D+A  L   +   G  P
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           + V+Y  LI      G+   A  L REM   G  PS VTY +++D +++   + +A    
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 370

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M+K G  PD+Y+Y  L+HG C+ G +  A +LF  M +   +PN V Y  +I G  KE
Sbjct: 371 NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 430

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           G S  A +L   M   GL P+ A YS+ +G L  D K
Sbjct: 431 GRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 467



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 178/395 (45%), Gaps = 38/395 (9%)

Query: 74  ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFHQ 131
           +S  +    +     + H  QL         K  +  Y S++DA+ + +  D+       
Sbjct: 68  LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           M + G+ P   T+  L+  +  +    K    F E + K +  DVY +  +I   C AG+
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML-----FRKIG-------- 237
           + +A EV ++    G  PN   Y +LI+G CK G +E A+ML      R +G        
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247

Query: 238 ----------------------ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
                                 ++G+    +TY  L CGL +     +       M   G
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V P+  +Y  LI  +CNEG + E  +LF EM       ++VTYN ++ G  K+  ++EAE
Sbjct: 308 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 367

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R  ++M+  G+ P++ +Y  L+ G C  G+ D A RLF ++K  G  P++V Y  LI   
Sbjct: 368 RFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 427

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +K G S+ A  L   M   G+TP +  Y+ L+ S 
Sbjct: 428 AKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 445 LMQKSGFSPDVYT---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           L Q +   PD  T     V++ G C  G +  A +L + M    ++ N + YN ++  Y 
Sbjct: 54  LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 113

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +E +  R   +L  M  +G+ P + +Y+  +  L       + E +  +M    L   V 
Sbjct: 114 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 173

Query: 562 LYNILYRA 569
            Y+ +  A
Sbjct: 174 FYSSVINA 181


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 201/407 (49%), Gaps = 5/407 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGILIKGCCEAG 189
           ML     P +  +N+L+   + S  F++      +N      E D ++F I+I G C+ G
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L  A E L+++ + GF PNV+ YT LIDG CK G  E A  +   +   GL      Y 
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            LI  L K+G  +D  + Y +M   G  P +YT+N LI+  C   K+ E   L+ +M   
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  N VTYNTLI    +   +Q+A++L+ +M+  G   + ITYN LI   C  G T+K 
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
             L  Q+      PS+ + N+LI +F + G    A   +R+M +RG+TP  VTY  LI+ 
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             +    ++A  +++ +Q  G  PD  TY  LI   C +G   +A +L          PN
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIASYSSTIGVL 535
           ++ ++++I  + K  +      +L  M   G  +  I  + S+IG +
Sbjct: 687 EITWSILINYFVKNNSDSEQFTIL--MGNWGFWLAAIIRHVSSIGCI 731



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 230/474 (48%), Gaps = 8/474 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  S +Y+ +I A  ++   ++A+    +M   G  P   TFN ++  + K+    +   
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAK 291

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  +    D    G L+ G C  G +++A  +L+++     +PN V+Y +LI+G  
Sbjct: 292 LHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYV 347

Query: 222 KNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
            +G  E AK +L++ +   G      T+ ++I GL K G      EF ++M   G  P++
Sbjct: 348 VSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY  LI  +C +G   E  K+ + M  + ++ N V YN LI  LCK+ ++Q+A ++  +
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  P++ T+N LI G C   + ++A  L+  +   G   + VTYN LI AF +   
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A  LV EM  RG     +TY  LI +  ++   EK   +   M      P + +  +
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+  C  G + +A +    M +  L P+ V YN +I G CK G    AL L   +  KG
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL--YRAKNN 572
           + P+  +Y++ I   C +G + +A  LL + +  G  P+   ++IL  Y  KNN
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 225/469 (47%), Gaps = 11/469 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGV---RPRSNTFNSLL-IFVIKSCSFD 158
           V K  L+  I+  + K+ L  QA      M   GV    P   ++N +L I V  +C   
Sbjct: 126 VFKESLFILIMRYYGKAGLPGQATRLLLDMW--GVYCFEPTFKSYNVVLEILVAGNCPKV 183

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
              +F+      +   VY+FG+++K  C   +++ A  +L  + + G  PN +IY  LI 
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
              +N  +  A  L  ++  +G      T+  +I GL K G   +  + +++M L   + 
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
                  L+H  C  GKV E   +  ++ +     N V YNTLI G     R +EA+ LL
Sbjct: 304 DALIQGYLMHGLCRMGKVDEARAMLSKIPNP----NTVLYNTLINGYVVSGRFEEAKDLL 359

Query: 339 -DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              M +AG  P+  T+N +IDG C  G    A    +++   G  P+V+TY +LI  F K
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G+ + AS +V  M  +G++ + V Y  LI +  +   ++ A +MY  M   G  PD+YT
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           +  LI+GLC    M+EA  L+  M    +  N V YN +I  + +     +A +L+GEM 
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +G   +  +Y+  I  LC+ G   +   L+ QM    + PS++  NIL
Sbjct: 540 FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 179/368 (48%), Gaps = 9/368 (2%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           E  F    V+   L+ G C     + A  +F  +   G+  T +T+ V++          
Sbjct: 162 EPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVD 217

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
                   M  +G  P+   Y  LIH      +V+E  KL +EM       +V T+N +I
Sbjct: 218 SACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVI 277

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCK  R+ EA +L D+M +   + + +    L+ G C  G+ D+A  + +++ +    
Sbjct: 278 HGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN---- 333

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLV-REMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           P+ V YN LI  +  +G  + A DL+ + M   G  P   T+ I+ID   +   +  A E
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
               M K GF P+V TY +LI G C +G+ +EASK+ NSM    L  N V YN +I   C
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K+G    AL++ GEM+ KG  P+I +++S I  LC++ K  EA  L   ML  G+  +  
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 562 LYNILYRA 569
            YN L  A
Sbjct: 514 TYNTLIHA 521



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 177/367 (48%), Gaps = 2/367 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S  P   + LY ++I+ ++ S R  +     +  M+ +G  P + TFN ++  + K    
Sbjct: 329 SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL 388

Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
                F  E   K  E +V ++ ILI G C+ G   +A +V+N +   G S N V Y  L
Sbjct: 389 VSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCL 448

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I   CK+G I+ A  ++ ++   G     +T+  LI GL KN   ++    Y  M L GV
Sbjct: 449 IGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGV 508

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
             +  TYN LIH +     + +  KL  EMR R    + +TYN LI  LCK    ++   
Sbjct: 509 IANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLG 568

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           L++QM    I P++ + N LI+ FC  G+ + A +    +   G +P +VTYN LI    
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G  + A +L   ++ +GI P  VTY  LI  +        A ++      +GF P+  
Sbjct: 629 KMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEI 688

Query: 457 TYGVLIH 463
           T+ +LI+
Sbjct: 689 TWSILIN 695



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 147/373 (39%), Gaps = 69/373 (18%)

Query: 266 EFYEKMQLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           + +EK  L  G   S + Y  LI +  N G+     KL  +M+          +  ++  
Sbjct: 79  DLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRY 138

Query: 325 LCKEMRVQEAERLL-DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
             K     +A RLL D   +    P   +YN +++          A  +F  + S G SP
Sbjct: 139 YGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISP 198

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +V T+ V+++AF        A  L+R+M + G  P+ + Y +LI +   ++ + +A ++ 
Sbjct: 199 TVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLL 258

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL----------------- 486
             M   G  PDV T+  +IHGLC  G + EA+KL + M                      
Sbjct: 259 EEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRM 318

Query: 487 --------------EPNDVVYNMMIFGY-------------------------------- 500
                          PN V+YN +I GY                                
Sbjct: 319 GKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378

Query: 501 ----CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
               CK+G    AL  L EM +KG  PN+ +Y+  I   C+ G + EA  ++N M   GL
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGL 438

Query: 557 KPSVSLYNILYRA 569
             +   YN L  A
Sbjct: 439 SLNTVGYNCLIGA 451


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 203/397 (51%), Gaps = 7/397 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+GIL++G C+AG+  +A E+L++++  G  PNVVI+T++I G C  G + +A + FR+I
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           GE       +TY+ L+  L K+G   + +    +M   G SP++ TYN LI  +    ++
Sbjct: 92  GE-DCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   L  EM  R    +V+TY  ++   CK   + EA RLL+ ++      NV+TYN L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSL 206

Query: 357 IDGFCDA--GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
                 A    T +A  L  ++   G  P+ V Y  ++    K      A  ++  M  +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G    +V+Y IL+ +F  +     + E+   M  SG+  D  T  V+IH  C  G++ EA
Sbjct: 267 GCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +LF SM++    P++V YN +I  +CK      A++LL +M +    PN+ +Y+S I  
Sbjct: 327 HQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKN 571
            C++ +  EA  +   M+  G  P    Y  L  +KN
Sbjct: 387 FCREQREEEARGIFQMMVDNGCFPDRVSYTTLKLSKN 423



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 163/343 (47%), Gaps = 36/343 (10%)

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            +DG+EFY    L   + +  +Y  L+  +C  G+  +  +L DEM+   V  NVV + T
Sbjct: 11  HRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTT 70

Query: 321 LICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           +I GLC   +V +A  LL   ++    +PNV TY+ L+D  C +G+  +A+ L  ++   
Sbjct: 71  IIRGLCTAGKVSQA--LLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKK 128

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G SP+VVTYN LI  F K         L++EM +RG     +TYT+++D F +++ +++A
Sbjct: 129 GCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA 188

Query: 440 F------------------------------EMYSLMQK---SGFSPDVYTYGVLIHGLC 466
           +                              E  SL++K    G  P+   Y  ++  LC
Sbjct: 189 YRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLC 248

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               + EA ++  SM+    + +DV Y +++  +   G +Y +L LLG M   G + +  
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTK 308

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +  I   C+ G   EA  L   M + G  PS   YN L  A
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGA 351



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 13/292 (4%)

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHR---EVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           ++  + +  +  +G++ +   RHR     A N V+Y  L+ G CK    Q+A  LLD+MK
Sbjct: 1   MLQIFVDSKRHRDGYEFY---RHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMK 57

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PNV+ +  +I G C AG+  +A   F ++  +  +P+V TY+ L+ A  K+G   
Sbjct: 58  SNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDC-APNVYTYSTLVDALCKSGQPH 116

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  LV EM ++G +P+ VTY  LID F + + +++   +   M + G   DV TY +++
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMIL 176

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY-CKEGN-SYRALRLLGEMNEKG 520
              C   ++ EA +L N++ +     N V YN +       EG+ +  AL LL +M ++G
Sbjct: 177 DIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEG 232

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             PN  +Y + + +LC++ +  EA  +L  M   G K     Y IL  A  N
Sbjct: 233 TRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFAN 284



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 133/299 (44%), Gaps = 17/299 (5%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++ID   K    D+ L    +M   G R    T+  +L    K+ S D
Sbjct: 131 SPNVVT----YNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSID 186

Query: 159 KGWLFFS--ENRCKVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEM---GFSPNVVI 212
           + +   +  E R     +V ++  L      A GD  +  E L+ LE+M   G  PN V 
Sbjct: 187 EAYRLLNALEKR-----NVVTYNSLFTALSTAEGD--RTTEALSLLEKMIQEGTRPNQVN 239

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y +++   CKN  ++ A  +   +   G      +Y +L+      G   D  E   +M 
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRML 299

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
            +G      T N +IH++C  G + E  +LF  M  R    + VTYNTLI   CK  +  
Sbjct: 300 GSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPD 359

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            A +LL QM  A   PNVITYN +I  FC     ++A  +F  +  NG  P  V+Y  L
Sbjct: 360 TAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F D+      +  +        + + V+Y +L++ F KAG  + A +L+ EM+  G+ P+
Sbjct: 5   FVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V +T +I     +  + +A   +  + +   +P+VYTY  L+  LC  G   EA  L  
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSTLVDALCKSGQPHEAYGLVT 123

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M +    PN V YN +I G+ K       L LL EM+++G   ++ +Y+  + + C++ 
Sbjct: 124 EMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNN 183

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              EA  LLN +     K +V  YN L+ A +  E
Sbjct: 184 SIDEAYRLLNAL----EKRNVVTYNSLFTALSTAE 214


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 214/450 (47%), Gaps = 40/450 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y  +ID   K+   + AL     M D+G+ P   T N ++  + K+   D     F    
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID------- 218
              C+   D  ++  LI+G    G +++A+++  Q+ +    PN V+YTSLI        
Sbjct: 472 HKTCRP--DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 219 --------------GCC--------------KNGDIERAKMLFRKIGELGLVATQHTYTV 250
                         GC               K G+IE+ + LF++I  LG +    +YT+
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI GL K G   + +E +  M+  G       YN +I  +C  GKV++ ++L +EM+ + 
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               VVTY ++I GL K  R+ EA  L ++ K  GI  NV+ Y+ LIDGF   G  D+A+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  +L   G +P+V T+N L+ A  KA     A    + M++   TP+ +TY+ILI   
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +     KAF  +  MQK GF P+V+TY  +I GL   GN+ EA  LF    E     + 
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
            +YN +I G      +  A RL  E   KG
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 2/451 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+AL  F +M    + P  +T+N ++  + K+   +   +     +   +  +V +  I+
Sbjct: 392 DEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+A  L+ A  +   L+     P+ V Y SLI+G  ++G ++ A  L+ ++ +   
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +     YT LI   FK G ++DG + Y +M   G SP L   N  +      G++ +G  
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF E+++     +  +Y  LI GL K     EA  L   MK  G   +   YN +IDGFC
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+ +KA++L  ++K+ G  P+VVTY  +I   +K      A  L  E + +GI  + V
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y+ LID F +   +++A+ +   + + G +P+VYT+  L+  L     + EA   F SM
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            + K  PN + Y+++I G CK     +A     EM ++G  PN+ +Y++ I  L + G  
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            EA+ L  +  + G     ++YN +    +N
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 245/554 (44%), Gaps = 42/554 (7%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
               I  M KL    AFS +   +  G   T +    +L L   +M    +A    L   
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYT--NLIGALSTSRDSDCMLTLF-QQMQELGYAVNVHLFTT 240

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +I  R+ +      + L  L ++  +S  P     LY   ID   K+   D A   FH+M
Sbjct: 241 LI--RVFAREGRVDAALSLLDEMKSNSLEP--DVVLYNVCIDCFGKAGKVDMAWKXFHEM 296

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
             +G+     T+ S++                              G+L    C+A  LN
Sbjct: 297 KANGLVLDDVTYTSMI------------------------------GVL----CKADRLN 322

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A E+   +++    P    Y ++I G    G  E A  L  +    G + +  +Y  ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   +  + +E+M+ + + P+L TYN +I   C  GK+     + D M+   + 
Sbjct: 383 SCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV+T N ++  LCK  R+ +A  + + +      P+ +TY  LI+G    G  D+A++L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + Q+    Q P+ V Y  LIR F K G  +    +  EM   G +P  +     +D   +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           + ++EK   ++  ++  GF PD  +Y +LIHGL   G   EA +LF +M E     +   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G+CK G   +A +LL EM  KG  P + +Y S I  L +  +  EA +L  +  
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 553 KLGLKPSVSLYNIL 566
             G++ +V +Y+ L
Sbjct: 682 SKGIELNVVIYSSL 695



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 185/400 (46%), Gaps = 8/400 (2%)

Query: 172 ELDVYSFGILIKGCCE-------AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E+ +  FG     C E       +  L +AF  +  + ++ F P    YT+LI     + 
Sbjct: 155 EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR 214

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D +    LF+++ ELG     H +T LI    + G         ++M+ N + P +  YN
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             I  +   GKV   +K F EM+   +  + VTY ++I  LCK  R+ EA  L + M   
Sbjct: 275 VCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P    YN +I G+  AG+ + A+ L  + +  G  PSVV+YN ++    + G    A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                EM++  I P+  TY I+ID   ++  +E A  +   M+ +G  P+V T  +++  
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    + +A  +F  +      P+ V Y  +I G  + G    A +L  +M +   +PN
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              Y+S I    + G+  +   + N+ML+LG  P + L N
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 203/443 (45%), Gaps = 4/443 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           G  P   ++N +L  + +    D+    F E +     ++ ++ I+I   C+AG L  A 
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETAL 429

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V + +++ G  PNV+    ++D  CK   ++ A  +F  +          TY  LI GL
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            ++G   + ++ YE+M      P+   Y  LI  +   G+  +G K+++EM     + ++
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +  NT +  + K   +++   L  ++K  G  P+  +Y  LI G   AG   +A+ LF  
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +K  G       YN +I  F K+G    A  L+ EM+ +G  P+ VTY  +ID   + D 
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A+ ++   +  G   +V  Y  LI G    G + EA  +   + +  L PN   +N 
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++    K      AL     M +    PN  +YS  I  LC+  K+ +A V   +M K G
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQG 789

Query: 556 LKPSVSLYNI----LYRAKNNIE 574
            KP+V  Y      L +A N +E
Sbjct: 790 FKPNVFTYTTMISGLAKAGNIVE 812



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 172/344 (50%), Gaps = 1/344 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           L  + +D   K+   ++    F ++ + G  P + ++  L+  ++K+    + + LF++ 
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 LD  ++  +I G C++G +NKA+++L +++  G  P VV Y S+IDG  K   +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E++   G++P++YT+NCL
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       ++SE    F  M+  +   N +TY+ LI GLCK  +  +A     +M+  G 
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TY  +I G   AG   +A  LF + K  G       YN +I   S A  +  A  
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L  E   +G +    T  +L+DS  +++ +E+A  + ++++++ 
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 1/268 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +R Y ++ID   KS   ++A     +M   G  P   T+ S++  + K    D+ ++
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F E + K +EL+V  +  LI G  + G +++A+ ++ +L + G +PNV  +  L+D   
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K  +I  A + F+ + +L       TY++LI GL K       F F+++MQ  G  P+++
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  +I      G + E   LF++ + +    +   YN +I GL    R  +A RL ++ 
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++ G S    T   L+D    A   ++A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 1/246 (0%)

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++    K  +++EA   +  M+     P    Y  LI     + ++D    LF Q++  G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            + +V  +  LIR F++ G    A  L+ EM+   + P  V Y + ID F ++  ++ A+
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAW 290

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           + +  M+ +G   D  TY  +I  LC    + EA +LF  M + K  P    YN MI GY
Sbjct: 291 KXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGY 350

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G    A  LL     KG +P++ SY+  +  L + G+  EA     +M K  + P++
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNL 409

Query: 561 SLYNIL 566
           S YNI+
Sbjct: 410 STYNIM 415


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 214/450 (47%), Gaps = 40/450 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---S 165
           Y  +ID   K+   + AL     M D+G+ P   T N ++  + K+   D     F    
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID------- 218
              C+   D  ++  LI+G    G +++A+++  Q+ +    PN V+YTSLI        
Sbjct: 472 HKTCRP--DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 219 --------------GCC--------------KNGDIERAKMLFRKIGELGLVATQHTYTV 250
                         GC               K G+IE+ + LF++I  LG +    +YT+
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI GL K G   + +E +  M+  G       YN +I  +C  GKV++ ++L +EM+ + 
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               VVTY ++I GL K  R+ EA  L ++ K  GI  NV+ Y+ LIDGF   G  D+A+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            +  +L   G +P+V T+N L+ A  KA     A    + M++   TP+ +TY+ILI   
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +     KAF  +  MQK GF P+V+TY  +I GL   GN+ EA  LF    E     + 
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
            +YN +I G      +  A RL  E   KG
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 2/451 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+AL  F +M    + P  +T+N ++  + K+   +   +     +   +  +V +  I+
Sbjct: 392 DEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+A  L+ A  +   L+     P+ V Y SLI+G  ++G ++ A  L+ ++ +   
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +     YT LI   FK G ++DG + Y +M   G SP L   N  +      G++ +G  
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF E+++     +  +Y  LI GL K     EA  L   MK  G   +   YN +IDGFC
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            +G+ +KA++L  ++K+ G  P+VVTY  +I   +K      A  L  E + +GI  + V
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y+ LID F +   +++A+ +   + + G +P+VYT+  L+  L     + EA   F SM
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            + K  PN + Y+++I G CK     +A     EM ++G  PN+ +Y++ I  L + G  
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            EA+ L  +  + G     ++YN +    +N
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 246/554 (44%), Gaps = 42/554 (7%)

Query: 13  TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
               I  M KL    AFS +   +  G   T +    +L L   +M    +A    L   
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYT--NLIGALSTSRDSDCMLTLF-QQMQELGYAVNVHLFTT 240

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           +I  R+ +      + L  L ++  +S  P     LY   ID   K+   D A  +FH+M
Sbjct: 241 LI--RVFAREGRVDAALSLLDEMKSNSLEP--DVVLYNVCIDCFGKAGKVDMAWKFFHEM 296

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLN 192
             +G+     T+ S++                              G+L    C+A  LN
Sbjct: 297 KANGLVLDDVTYTSMI------------------------------GVL----CKADRLN 322

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A E+   +++    P    Y ++I G    G  E A  L  +    G + +  +Y  ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   +  + +E+M+ + + P+L TYN +I   C  GK+     + D M+   + 
Sbjct: 383 SCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NV+T N ++  LCK  R+ +A  + + +      P+ +TY  LI+G    G  D+A++L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + Q+    Q P+ V Y  LIR F K G  +    +  EM   G +P  +     +D   +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           + ++EK   ++  ++  GF PD  +Y +LIHGL   G   EA +LF +M E     +   
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G+CK G   +A +LL EM  KG  P + +Y S I  L +  +  EA +L  +  
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 553 KLGLKPSVSLYNIL 566
             G++ +V +Y+ L
Sbjct: 682 SKGIELNVVIYSSL 695



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 185/400 (46%), Gaps = 8/400 (2%)

Query: 172 ELDVYSFGILIKGCCE-------AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E+ +  FG     C E       +  L +AF  +  + ++ F P    YT+LI     + 
Sbjct: 155 EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR 214

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D +    LF+++ ELG     H +T LI    + G         ++M+ N + P +  YN
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
             I  +   GKV   +K F EM+   +  + VTY ++I  LCK  R+ EA  L + M   
Sbjct: 275 VCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P    YN +I G+  AG+ + A+ L  + +  G  PSVV+YN ++    + G    A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                EM++  I P+  TY I+ID   ++  +E A  +   M+ +G  P+V T  +++  
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC    + +A  +F  +      P+ V Y  +I G  + G    A +L  +M +   +PN
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              Y+S I    + G+  +   + N+ML+LG  P + L N
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 172/344 (50%), Gaps = 1/344 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           L  + +D   K+   ++    F ++ + G  P + ++  L+  ++K+    + + LF++ 
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 LD  ++  +I G C++G +NKA+++L +++  G  P VV Y S+IDG  K   +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E++   G++P++YT+NCL
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       ++SE    F  M+  +   N +TY+ LI GLCK  +  +A     +M+  G 
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TY  +I G   AG   +A  LF + K  G       YN +I   S A  +  A  
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L  E   +G +    T  +L+DS  +++ +E+A  + ++++++ 
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 1/268 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +R Y ++ID   KS   ++A     +M   G  P   T+ S++  + K    D+ ++
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F E + K +EL+V  +  LI G  + G +++A+ ++ +L + G +PNV  +  L+D   
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K  +I  A + F+ + +L       TY++LI GL K       F F+++MQ  G  P+++
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  +I      G + E   LF++ + +    +   YN +I GL    R  +A RL ++ 
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKA 369
           ++ G S    T   L+D    A   ++A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 1/246 (0%)

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           ++    K  +++EA   +  M+     P    Y  LI     + ++D    LF Q++  G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            + +V  +  LIR F++ G    A  L+ EM+   + P  V Y + ID F ++  ++ A+
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAW 290

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           + +  M+ +G   D  TY  +I  LC    + EA +LF  M + K  P    YN MI GY
Sbjct: 291 KFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGY 350

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
              G    A  LL     KG +P++ SY+  +  L + G+  EA     +M K  + P++
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNL 409

Query: 561 SLYNIL 566
           S YNI+
Sbjct: 410 STYNIM 415


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 202/399 (50%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E  V +   LI G C  G++ +A  + + +E+M +  +V  Y  LI+G CK GD   A 
Sbjct: 143 LEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAV 202

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
              RK+ E         Y+ ++ GL K+GL  +      +M   GV P+L TY CLI   
Sbjct: 203 GWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGL 262

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           CN G+  E   L DEM    +  ++   N L+   CKE +V +A+ ++  M + G  P+V
Sbjct: 263 CNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDV 322

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN LI  +C   + ++A R+F+ + S G+ P +V +  LI  + K  N   A  L+ E
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEE 382

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G  P   T+T LI  F ++     A E++  M K G  P++ T  V++ GLC +  
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA  L  +M ++ L+ N V+Y++++ G C  G    A  L   +  KGL  N+  Y+ 
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  LC+ G   +AE LL  M + G  P+   YN+  + 
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQG 541



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 194/398 (48%), Gaps = 35/398 (8%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LDVY++G+LI G C+ GD   A   L ++EE  + PNVV+Y++++DG CK+G +  A  L
Sbjct: 180 LDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNL 239

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-------------------- 272
             ++   G+     TY  LI GL   G  K+     ++M                     
Sbjct: 240 CSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCK 299

Query: 273 ---------------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
                          L G  P ++TYN LIH YC + K++E  ++F  M  R    ++V 
Sbjct: 300 EGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVV 359

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           + +LI G CK+  + +A  LL++M   G  P+V T+  LI GFC AG    A  LF  + 
Sbjct: 360 FTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMH 419

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             GQ P++ T  V++    K      A  L + ME+  +  + V Y+IL+D    +  + 
Sbjct: 420 KYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLN 479

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A+E++S +   G   +VY Y ++I GLC +G++ +A  L  +M E    PN+  YN+ +
Sbjct: 480 AAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFV 539

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            G   +    R+++ L  M +KG   + A+    I  L
Sbjct: 540 QGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 7/362 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----GWLF 163
           +Y +I+D   K  L  +AL    +M   GVRP   T+  L+  +   C+F +    G L 
Sbjct: 219 VYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGL---CNFGRWKEAGSLL 275

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               +  +  D+    IL+   C+ G + +A  V+  +   G  P+V  Y SLI   C  
Sbjct: 276 DEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQ 335

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +  A  +F  +   G +     +T LI G  K+          E+M   G  P + T+
Sbjct: 336 NKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATW 395

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             LI  +C  G+     +LF  M       N+ T   ++ GLCKE  + EA  L   M+ 
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEK 455

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           + +  N++ Y+ L+DG C AG+ + A+ LF+ L   G   +V  Y ++I+   K G+   
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDK 515

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL+  MEE G  P+  TY + +   +   ++ ++ +  ++M+  GFS D  T   +I+
Sbjct: 516 AEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575

Query: 464 GL 465
            L
Sbjct: 576 YL 577



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-G 380
           +C   K   + EA  L   M      P+V  +  L+           A  L   + S+ G
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLG 107

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
                +T N++I    +         ++  M + G+ P+ +T T LI+      ++ +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M+K  +  DVYTYGVLI+GLC  G+   A      M E   +PN VVY+ ++ G 
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK+G    AL L  EMN KG+ PN+ +Y+  I  LC  G+W EA  LL++M+K+G++P +
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDL 287

Query: 561 SLYNILYRA 569
            + NIL  A
Sbjct: 288 QMLNILVDA 296



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 2/301 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           ++DA  K     QA      M+ +G  P   T+NSL+         ++    F     + 
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 172 EL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            L D+  F  LI G C+  ++NKA  +L ++ +MGF P+V  +T+LI G C+ G    AK
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF  + + G V    T  V++ GL K  L  +     + M+ + +  ++  Y+ L+   
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGM 472

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+ GK++  ++LF  +  + +  NV  Y  +I GLCK+  + +AE LL  M+  G  PN 
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNN 532

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS-KAGNSKMASDLVR 409
            TYN  + G     E  ++ +    ++  G S    T   +I   S   G++K+   L R
Sbjct: 533 CTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFLFR 592

Query: 410 E 410
           +
Sbjct: 593 K 593


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 1/441 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCE 187
           F +M   G+RP   T+NSL+    K          F E +    E DV ++  LI   C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              + +AFE L+ +++ G  PNVV Y++LID  CK G +  A   F  +  +GL   + T
Sbjct: 334 FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           YT LI    K G   + F+   +MQ  GV+ ++ TY  L+   C +G++ E  +LF  + 
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 N   Y +L  G  K   +++A  +L++M    + P+++ Y   I G C   E +
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
            +  +  ++   G + +   Y  LI A+ K G +  A +L++EM++ GI  + VTY +LI
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   +   +++A   +  M ++G  P++  Y  LI GLC    ++EA  LFN M +  + 
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ +VY  +I G  K GN   AL L   M E G+  ++ +Y+S I    + G+   A+ L
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693

Query: 548 LNQMLKLGLKPSVSLYNILYR 568
           L++ML+ G+ P   L   L R
Sbjct: 694 LDEMLRKGIIPDQVLCICLLR 714



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 197/362 (54%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P   ++ +L +     G +E A+  F K+ +  ++    +   L+  L K+        F
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           ++ M + G+SPS++TYN +I     EG +     LF+EM+ + +  ++VTYN+LI G  K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
              +  A  + ++MK AG  P+VITYN LI+ FC      +AF   + +K  G  P+VVT
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           Y+ LI AF KAG    A+    +M   G+ P+E TYT LID+  +  D+ +AF++ S MQ
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           ++G + ++ TY  L+ GLC  G M+EA +LF ++ +     N  +Y  +  GY K     
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           +A+ +L EMN+K L P++  Y + I  LC+  +  ++  ++ +M+  GL  +  +Y  L 
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 568 RA 569
            A
Sbjct: 539 DA 540



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 210/430 (48%), Gaps = 1/430 (0%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           RP    F++L   ++     ++    F+  N+ +V   V S   L+    ++     A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
               +   G SP+V  Y  +I    + GD+E A+ LF ++   GL     TY  LI G  
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K G+       +E+M+  G  P + TYN LI+ +C   ++ + F+    M+ R +  NVV
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY+TLI   CK   + EA +    M   G+ PN  TY  LID  C  G+ ++AF+L +++
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +  G + ++VTY  L+    + G  + A +L   + + G T ++  YT L   ++++  M
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           EKA ++   M K    PD+  YG  I GLC +  ++++  +   M +  L  N  +Y  +
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  Y K G +  A+ LL EM + G+   + +Y   I  LC+ G   +A    + M + GL
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597

Query: 557 KPSVSLYNIL 566
           +P++ +Y  L
Sbjct: 598 QPNIMIYTAL 607



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 206/415 (49%), Gaps = 1/415 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y S+I+   K     QA  Y H M   G++P   T+++L+    K+    +   FF +  
Sbjct: 324 YNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMI 383

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ + +++  LI   C+ GDLN+AF++ +++++ G + N+V YT+L+DG C++G + 
Sbjct: 384 RVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMR 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ LF  + + G    Q  YT L  G  K  + +   +  E+M    + P L  Y   I
Sbjct: 444 EAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKI 503

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C + ++ +   +  EM    +  N   Y TLI    K  +  EA  LL +M+  GI 
Sbjct: 504 WGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIK 563

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             V+TY  LIDG C  G   +A R F+ +  NG  P+++ Y  LI    K    + A +L
Sbjct: 564 ITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNL 623

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM ++GI+P ++ YT LID  ++  +  +A  + + M + G   D+  Y  LI G   
Sbjct: 624 FNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSR 683

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G ++ A  L + M    + P+ V+   ++  Y + G+   AL L  +M  +GL+
Sbjct: 684 YGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 249/546 (45%), Gaps = 15/546 (2%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK-IISGRITSSS 82
           P  A   F  A +R G +H  +S  ++  +L   M    +  A+++I + I+ GR     
Sbjct: 108 PKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMF---YLDARSVIKEWILLGREFPG- 163

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKS-RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS 141
                  C    +  S+ N       +++++ +  +   + ++A   F +M    V P+ 
Sbjct: 164 -------CDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKV 216

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            + N LL  + KS        FF +     +   V+++ ++I      GDL  A  +  +
Sbjct: 217 RSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEE 276

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           ++  G  P++V Y SLIDG  K G +  A  +F ++ + G      TY  LI    K   
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
               FE+   M+  G+ P++ TY+ LI  +C  G + E  K F +M    +  N  TY +
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI   CK   + EA +L  +M+ AG++ N++TY  L+DG C+ G   +A  LF  L   G
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            + +   Y  L   + KA   + A D++ EM ++ + P  + Y   I    R +++E + 
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            +   M   G + + Y Y  LI      G   EA  L   M +  ++   V Y ++I G 
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G   +A+R    M   GL PNI  Y++ I  LC++    EA+ L N+ML  G+ P  
Sbjct: 577 CKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDK 636

Query: 561 SLYNIL 566
            +Y  L
Sbjct: 637 LVYTSL 642



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 19/365 (5%)

Query: 224 GDIERAKMLFRKIG-ELGLVATQHTYTVL----ICGLFKN------------GLQKDGFE 266
           GD + A   F++ G   G      +Y VL     CG+F              G +  G +
Sbjct: 106 GDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCD 165

Query: 267 FYEKM--QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           F++ +    N   P    ++ L +   + G + E  + F +M    V   V + N L+  
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           L K  +   A      M +AG+SP+V TYN +I      G+ + A  LF ++K+ G  P 
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           +VTYN LI  + K G    A  +  EM++ G  P  +TY  LI+ F + + + +AFE   
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M++ G  P+V TY  LI   C  G + EA+K F  M    L+PN+  Y  +I   CK G
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   A +L  EM + G+  NI +Y++ +  LC+DG+  EAE L   +LK G   +  +Y 
Sbjct: 406 DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYT 465

Query: 565 ILYRA 569
            L+  
Sbjct: 466 SLFHG 470



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 1/318 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +++D   +     +A   F  +L +G       + SL    IK+   +K      E N
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ D+  +G  I G C   ++  +  V+ ++ + G + N  IYT+LID   K G   
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L +++ +LG+  T  TY VLI GL K GL +    +++ M  NG+ P++  Y  LI
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C    + E   LF+EM  + ++ + + Y +LI G  K     EA  L ++M   G+ 
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGME 668

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            ++  Y  LI GF   G+   A  L +++   G  P  V    L+R + + G+   A  L
Sbjct: 669 LDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALAL 728

Query: 408 VREMEERGITPSEVTYTI 425
             +M  RG+    +  T+
Sbjct: 729 HDDMARRGLISGTIDITV 746



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 108/226 (47%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P    ++ L +   D G  ++A + F ++      P V + N L+   SK+    +A   
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            ++M   G++PS  TY ++I    R  D+E A  ++  M+  G  PD+ TY  LI G   
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +  A  +F  M +   EP+ + YN +I  +CK     +A   L  M ++GL PN+ +
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           YS+ I   C+ G   EA      M+++GL+P+   Y  L  A   I
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKI 404



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 1/219 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y ++IDA+ K   + +A+    +M D G++    T+  L+  + K     +   +F 
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590

Query: 166 E-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              R  ++ ++  +  LI G C+   L +A  + N++ + G SP+ ++YTSLIDG  K+G
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           +   A  L  ++ E+G+      YT LI G  + G  +      ++M   G+ P      
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
           CL+ +Y   G ++E   L D+M  R +    +      C
Sbjct: 711 CLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSC 749


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/579 (27%), Positives = 256/579 (44%), Gaps = 71/579 (12%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           KA   F WAS                  L K + HS +  + LI K+        +F   
Sbjct: 54  KALQTFKWASN-----------------LPKFT-HSQSTYRALIQKL-------CAFHRF 88

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
             +  L    P +        ++ ++I    ++R+    +     +   G  P    FNS
Sbjct: 89  DTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNS 148

Query: 147 LLIFVIKSCSFDKGWLFFSENR--CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           +L  ++K    D    F+ +      V+ D Y+F IL+KG C    +   F +L  ++  
Sbjct: 149 ILDVLVK-VDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSR 207

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PN V+Y +L+   CKNG + RA+ L  +I E        T+ VLI    K       
Sbjct: 208 GVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQA 263

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               EK    G  P + T   ++   CN G+V+E  ++ + + ++    +VV YNTL+ G
Sbjct: 264 LVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRG 323

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C+  +++ A R L +M+  G  PNV TYN LI GFCD+G  D A  +FN +K++G S +
Sbjct: 324 FCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWN 383

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEE-RGITPSEVT-YTILIDSFVRSDDMEKAFEM 442
             TY+ LI+     G  +    ++  MEE +G +   ++ Y  ++    + +  ++A E 
Sbjct: 384 FDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEF 443

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             LM+     P      + I G C KG +K A  +F+ M      PN +VY+ ++ G+C+
Sbjct: 444 --LMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQ 501

Query: 503 EGN-----------------------------------SYRALRLLGEMNEKGLVPNIAS 527
           EGN                                      AL+LL +M  +G VP+  +
Sbjct: 502 EGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGT 561

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  I  LC+ G + +A  + NQM++ G+ P  S +N L
Sbjct: 562 YSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSL 600



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 191/423 (45%), Gaps = 41/423 (9%)

Query: 117 LKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDV 175
           L +R+ D   F   Q++ S GV+P +  +N+LL  + K+    +      E     E + 
Sbjct: 190 LTNRIGDG--FRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIE---EPND 244

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            +F +LI   C+  +L +A  +L +   +GF P+VV  T +++  C  G +  A  +  +
Sbjct: 245 VTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLER 304

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +   G +     Y  L+ G  + G  K    F ++M+  G  P++ TYN LI  +C+ G 
Sbjct: 305 VEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGM 364

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-------------- 341
                 +F++M+   ++ N  TY+TLI GL    R++E  ++L+ M              
Sbjct: 365 FDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPY 424

Query: 342 ---------------------KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
                                KM  + P  +  +  I GFC+ G    A  +F+Q+ + G
Sbjct: 425 NSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEG 484

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
            +P+++ Y+ L+  F + GN + A +L+ EM   G       +  LI  F      E A 
Sbjct: 485 GTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESAL 544

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           ++   M   G  PD  TY  LI  LC KGN ++A  +FN M E  + P+   +N ++   
Sbjct: 545 KLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRL 604

Query: 501 CKE 503
            KE
Sbjct: 605 SKE 607


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGC 185
             +M  +   P   TFN+++  + +    D+        SE+ C    D+ ++  ++ G 
Sbjct: 379 LAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA--DIVTYSSILDGL 436

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G ++ A E+L++L+  G  P+ + YT+++ G C     ERA+ L  ++        +
Sbjct: 437 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDE 496

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+  ++  L + GL        E+M  NG SP + TYNC+I   CNE  + +  +L  +
Sbjct: 497 VTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           ++      ++VT+NTL+ GLC   R ++AE+L+  M  +   P+ +T+N +I   C  G 
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A      +  NG  P+  TY++++ A  KAG ++ A +L+  M     TP  +TY  
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNT 674

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I +  ++  ME+A ++  +M  +G  PD  TY  L +G+C +     A ++   + +T 
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   YN ++ G+C++  +  A+     M   G +P+ ++Y   +  L   G   EA+
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 546 VLLNQMLKLGL 556
            LL  +  LG+
Sbjct: 795 RLLASLCSLGV 805



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 219/468 (46%), Gaps = 15/468 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I+A       D+AL     +   G +P + T+      V+KS    + W    E  
Sbjct: 324 YNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTP----VLKSLCGSERWKEVEELL 379

Query: 167 -----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                N C    D  +F  ++   C+ G +++A EV++ + E G   ++V Y+S++DG C
Sbjct: 380 AEMTSNNCAP--DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G ++ A  L  ++   G       YT ++ GL      +   E   +M  +   P   
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N ++   C +G V    ++ ++M     + ++VTYN +I GLC E  + +A  LL  +
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G  P+++T+N L+ G C     + A +L   +  +   P  +T+N +I +  + G  
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A + ++ M E G  P+  TY+I++D+ +++   + A E+ S M     +PD+ TY  +
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  L   G M+EA  L   M    L P+   Y  + +G C+E  + RA+R+L  + + GL
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            P+   Y+  +   C+D +   A      M+  G  P  S Y IL  A
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEA 783



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 211/451 (46%), Gaps = 4/451 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
           ++ R+ D AL  F  ML  G  P   T++ LL    K   + +      E R K  E D+
Sbjct: 263 VRGRIPD-ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDI 321

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ +LI   C  GD+++A  +L+ L   G  P+ V YT ++   C +   +  + L  +
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +        + T+  ++  L + GL     E  + M  +G    + TY+ ++   C+ G+
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V +  +L   ++      + + Y T++ GLC   + + AE L+ +M  +   P+ +T+N 
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           ++   C  G  D+A R+  Q+  NG SP +VTYN +I           A +L+ +++  G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  VT+  L+      D  E A ++ + M +S   PD  T+  +I  LC KG + +A 
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +    M E    PN   Y++++    K G +  AL LL  M      P++ +Y++ I  L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNL 679

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + GK  EA  LL  M+  GL P  + Y  L
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSL 710



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 202/420 (48%), Gaps = 43/420 (10%)

Query: 187 EAGDLNKAFEVLNQLEEMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           + G++++A  + + +   G    P VV    LI   C +G +  A+ +F     LG  AT
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AALGPSAT 218

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY  ++ G  + G  +D       M      P  +T+N LI   C  G++ +   +FD
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIPDALAVFD 275

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           +M HR  + +VVTY+ L+   CKE   ++A  LLD+M+  G  P+++TYN LI+  C+ G
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D+A  + + L S+G  P  VTY  ++++   +   K   +L+ EM      P EVT+ 
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM--- 481
            ++ S  +   +++A E+   M + G   D+ TY  ++ GLC  G + +A +L + +   
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 482 ---------------------WETKLE-----------PNDVVYNMMIFGYCKEGNSYRA 509
                                WE   E           P++V +N ++   C++G   RA
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +R++ +M+E G  P+I +Y+  I  LC +    +A  LL+ +   G KP +  +N L + 
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 188/396 (47%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F  LI+  C  G +  A  V + +   G SP+VV Y+ L+D  CK     +A  L 
Sbjct: 250 DTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALL 309

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G      TY VLI  +   G   +       +  +G  P   TY  ++   C  
Sbjct: 310 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +  E  +L  EM     A + VT+NT++  LC++  V  A  ++D M   G   +++TY
Sbjct: 370 ERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTY 429

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + ++DG CD G  D A  L ++LKS G  P  + Y  +++        + A +L+ EM  
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
               P EVT+  ++ S  +   +++A  +   M ++G SPD+ TY  +I GLC +  + +
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L + +     +P+ V +N ++ G C       A +L+  M      P+  ++++ I 
Sbjct: 550 AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LCQ G   +A   L  M + G  P+ S Y+I+  A
Sbjct: 610 SLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDA 645



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 201/450 (44%), Gaps = 15/450 (3%)

Query: 123 DQALFYFHQMLDSGVR--PRSNTFNSLLIFVIKSCS----FDKGWLFFSENRCKVELDVY 176
           D+AL  F  M   G R  P     N   I + + CS     D   +F +         V 
Sbjct: 167 DEALVLFDSMASGGGRNCPPVVPCN---ILIKRLCSDGRVSDAERVFAALGPSAT---VV 220

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  ++ G C AG +  A  ++N    M F P+   +  LI   C  G I  A  +F  +
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLING---MPFPPDTFTFNPLIRALCVRGRIPDALAVFDDM 277

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G   +  TY++L+    K    +      ++M+  G  P + TYN LI+  CNEG V
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E   +   +       + VTY  ++  LC   R +E E LL +M     +P+ +T+N +
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           +   C  G  D+A  + + +  +G    +VTY+ ++      G    A +L+  ++  G 
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
            P  + YT ++     ++  E+A E+ + M  S   PD  T+  ++  LC KG +  A +
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +   M E    P+ V YN +I G C E     A+ LL ++   G  P+I ++++ +  LC
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC 577

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +W +AE L+  M++    P    +N +
Sbjct: 578 GVDRWEDAEQLMANMMRSNCPPDELTFNTV 607



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 43/211 (20%)

Query: 364 GETDKAFRLFNQLKSNG--QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           GE D+A  LF+ + S G    P VV  N+LI+     G                      
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDG---------------------- 201

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
                     R  D E+ F         G S  V TY  +++G C  G +++A +L N M
Sbjct: 202 ----------RVSDAERVFAAL------GPSATVVTYNTMVNGYCRAGRIEDARRLINGM 245

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P+   +N +I   C  G    AL +  +M  +G  P++ +YS  +   C++  +
Sbjct: 246 ---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 302

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
            +A  LL++M   G +P +  YN+L  A  N
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 198/391 (50%), Gaps = 3/391 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +   LI+  C+ G    A +++  LEE G   +V  Y  LI G CK+G+IE A    
Sbjct: 113 DVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA---L 169

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R +  +G+     TY  ++C L   G  K   +   +   +   P + T   LI   C E
Sbjct: 170 RVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKE 229

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             V +  KLF+EMR++    +VVTYN LI G CK  R+ EA R L ++   G  P+VI++
Sbjct: 230 SGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISH 289

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G    A +L   +   G  PSVVT+N+LI    + G    A +++  M +
Sbjct: 290 NMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK 349

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G TP+  ++  LI  F     +++A E   +M   G  PD+ TY +L+  LC  G + +
Sbjct: 350 HGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDD 409

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  + + +      P+ + YN +I G  K G +  A+ LL EM  KGL P++ + +S +G
Sbjct: 410 AVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVG 469

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            L ++GK  EA    + + +  ++P+  +YN
Sbjct: 470 GLSREGKVREAMKFFHYLKRFAIRPNAFIYN 500



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 191/372 (51%), Gaps = 3/372 (0%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           G+L +    L  +   G SP+V+  T+LI   CK G  + A  +   + E G V    +Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            VLI G  K+G  ++     ++M   GVSP+  TY+ ++   C+ GK+ +  ++      
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
            +   +VVT   LI   CKE  V +A +L ++M+  G  P+V+TYN LI GFC  G  D+
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A R   +L S G  P V+++N+++R+    G    A  L+  M  +G  PS VT+ ILI+
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +   + KA  +  +M K G +P+  ++  LI G C    +  A +    M      P
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V YN+++   CK+G    A+ +L +++ KG  P++ SY++ I  L + GK   A  LL
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 549 NQMLKLGLKPSV 560
            +M   GLKP +
Sbjct: 450 EEMCYKGLKPDL 461



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 214/457 (46%), Gaps = 37/457 (8%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S  V     Y  +I  + KS   ++AL    +M   GV P + T++++L      CS   
Sbjct: 143 SGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVL------CSL-- 191

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
                                     C+ G L +A +VL +  +    P+VV  T LID 
Sbjct: 192 --------------------------CDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK   + +A  LF ++   G      TY VLI G  K G   +   F +K+   G  P 
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + ++N ++   C+ G+  +  KL   M  +    +VVT+N LI  LC++  + +A  +L+
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLE 345

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M   G +PN  ++N LI GFC+    D+A      + S G  P +VTYN+L+ A  K G
Sbjct: 346 MMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDG 405

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  ++ ++  +G +PS ++Y  +ID  ++    E A E+   M   G  PD+ T  
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 465

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            ++ GL  +G ++EA K F+ +    + PN  +YN +I G CK   +  A+  L +M  K
Sbjct: 466 SVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK 525

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           G  P  A+Y++ I  +  +G   +A  L N++   GL
Sbjct: 526 GCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 3/345 (0%)

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +NG++E        +   G        T LI    K G  K+  +    ++ +G    + 
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +YN LI  YC  G++ E  ++ D M    V+ N  TY+ ++C LC   ++++A ++L + 
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +   P+V+T   LID  C      +A +LFN++++ G  P VVTYNVLI+ F K G  
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A   ++++   G  P  +++ +++ S         A ++ + M + G  P V T+ +L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+ LC KG + +A  +   M +    PN   +N +I G+C      RA+  L  M  +G 
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            P+I +Y+  +  LC+DGK  +A V+L+Q+   G  PS+  YN +
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 432



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 170/370 (45%), Gaps = 1/370 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
           QA+    + L S   P   T   L+    K     +    F+E R K  + DV ++ +LI
Sbjct: 199 QAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLI 258

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           KG C+ G L++A   L +L   G  P+V+ +  ++   C  G    A  L   +   G +
Sbjct: 259 KGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL 318

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            +  T+ +LI  L + GL        E M  +G +P+  ++N LI  +CN   +    + 
Sbjct: 319 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEY 378

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            + M  R    ++VTYN L+  LCK+ +V +A  +L Q+   G SP++I+YN +IDG   
Sbjct: 379 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 438

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+ + A  L  ++   G  P ++T   ++   S+ G  + A      ++   I P+   
Sbjct: 439 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFI 498

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  +I    +S     A +  + M   G  P   TY  LI G+  +G  ++ASKL N ++
Sbjct: 499 YNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELY 558

Query: 483 ETKLEPNDVV 492
              L    +V
Sbjct: 559 SRGLVKRSLV 568



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 147/342 (42%), Gaps = 36/342 (10%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NR 168
           +IDA  K     QA+  F++M + G +P   T+N L+    K    D+   F  +     
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 169 CKVEL---------------------------------DVYSFGILIKGCCEAGDLNKAF 195
           C+ ++                                  V +F ILI   C+ G L KA 
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            VL  + + G +PN   +  LI G C    I+RA      +   G      TY +L+  L
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K+G   D      ++   G SPSL +YN +I      GK     +L +EM ++ +  ++
Sbjct: 402 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 461

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +T  +++ GL +E +V+EA +    +K   I PN   YN +I G C + +T  A      
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           + + G  P+  TY  LI+  +  G ++ AS L  E+  RG+ 
Sbjct: 522 MVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 3/178 (1%)

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +R   + G  +  S  +  M  +G +P  +  T LI  F +    + A ++  ++++SG 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             DV +Y VLI G C  G ++EA ++ + M    + PN   Y+ ++   C  G   +A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +LG   +    P++ + +  I   C++    +A  L N+M   G KP V  YN+L + 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKG 260


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 218/456 (47%), Gaps = 17/456 (3%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL--------FFSENRCK 170
           SR +D AL  F +ML +G++   N  N+L+      C+   G L          + + C 
Sbjct: 175 SRATD-ALAVFQEMLGAGLKADVNVCNTLI-----HCTCRLGMLRQARRLLHHMTAHACA 228

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
              D +++GIL+   C AG +++    +      G + + V Y  +I G  + G +  A 
Sbjct: 229 --RDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF        V    TY +LI  L K+   ++    +++ +  GV   ++TY+ L+  +
Sbjct: 287 QLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G+ ++  ++F  M+      + V YN LI  L K+ +V EA  LL+ M   GI P+ 
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN +ID     G  +KA+  F  +K    SP VVTYN L+    K   +  A DL  E
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M+     P   T+  LID+  ++  ME A E  + + K G +P+ Y Y  LI G C  G 
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +  +LF  M E    P+ + Y +++ G+ + G++  A+ LL EM  +G  P +A+Y+ 
Sbjct: 526 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 585

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  L   G+  +A  L  +M+  G  P +  Y+ L
Sbjct: 586 LIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 43/490 (8%)

Query: 120 RLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFF----SENRCKVELD 174
           R  +QA+  F  M ++    P    +N+L+    K+   D+    F     E  CK   +
Sbjct: 103 RRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKP--N 160

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
             SF  L+   C+      A  V  ++   G   +V +  +LI   C+ G + +A+ L  
Sbjct: 161 AVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLH 220

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            +          TY +L+    + G   +   F E  + +G + S   YN +I  +   G
Sbjct: 221 HMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCG 280

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           +++E  +LF+    +E   +V TYN LI  LCK  +++EA  L  + +  G+  +V TY+
Sbjct: 281 RLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            L+D F  AG   KA  +F  ++  G  P  V YNVLI    K G    A +L+ +M  +
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           GI P   TY I+ID        EKA+  + +M++   SPDV TY  L++GL       EA
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459

Query: 475 SKLFNSM------------------------WETKLE-----------PNDVVYNMMIFG 499
             LF+ M                         E  LE           PN  +YN +I G
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +C+ G   +   L  +M E    P+  +Y+  +    + G    A  LL +M++ G  P+
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 579

Query: 560 VSLYNILYRA 569
           ++ YN+L R+
Sbjct: 580 LATYNVLIRS 589



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 156/373 (41%), Gaps = 41/373 (10%)

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           ++ + + GL    HT T ++  + K G  +   E   +++  GV  S  T    I  +  
Sbjct: 6   YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65

Query: 293 EGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMK-MAGISPN 349
            G +     + D+MR R   C  + V +   +  LC+  RV++A  L D M+     +P+
Sbjct: 66  AGDLDAAMGMLDDMR-RGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTY-------------------- 388
           V+ YN LI G+C AG+ D+A  +F +LK  G   P+ V++                    
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184

Query: 389 ---------------NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
                          N LI    + G  + A  L+  M          TY IL+++  R+
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             M +      L +  G +     Y  +I G    G + EA++LF S    +  P+   Y
Sbjct: 245 GQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY 304

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I   CK      AL L  E  + G+V ++ +YS  +    + G+  +A  +   M K
Sbjct: 305 NLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQK 363

Query: 554 LGLKPSVSLYNIL 566
            G  P   +YN+L
Sbjct: 364 AGCMPDTVVYNVL 376



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 3/201 (1%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A   +  L   G      T   +++   K G +++ ++L+ E+ ++G+  SEVT T  I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 429 SFVRSDDMEKAFEMYSLMQKSGF-SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET-KL 486
           +F R+ D++ A  M   M++  F  PD   +   +H LC    +++A  LF+ M ET   
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPEAE 545
            P+ V YN +I GYCK G+  RAL +   + ++G   PN  S+ + +  LC+  +  +A 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            +  +ML  GLK  V++ N L
Sbjct: 182 AVFQEMLGAGLKADVNVCNTL 202



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFF-- 164
           +Y  +I    K    D+AL     M   G+ P   T+N ++I V+ SC  ++K + FF  
Sbjct: 372 VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYN-IVIDVLSSCGRYEKAYSFFGM 430

Query: 165 -------------------------SENRC---------KVELDVYSFGILIKGCCEAGD 190
                                    ++  C         K   D+ +FG LI    +AG 
Sbjct: 431 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 490

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +  A E   +L +MG +PN  IY +LI G C++G +++   LF+ + E        TYT+
Sbjct: 491 MEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 550

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ G  + G      E  ++M   G +P+L TYN LI      G+V + + LF EM  + 
Sbjct: 551 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610

Query: 311 VACNVVTYNTL 321
              ++ TY+ L
Sbjct: 611 FNPDMQTYSAL 621


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 253/551 (45%), Gaps = 10/551 (1%)

Query: 22  KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           K  P  A+S F      G QH   + + ++R+L            Q+L+ +I+  + +  
Sbjct: 74  KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCR---WRLERKLQSLLSEIVGSKESVL 130

Query: 82  SFTPRSL--LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
            F   +L  +           +      + + ++ A+++  + D+A+    Q    G  P
Sbjct: 131 GFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVP 190

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
              + N L+  +I+    D     +    R  +  + Y++GI IK  C  G+  +A +V 
Sbjct: 191 HIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVF 250

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            ++EE G +PN V  ++ I+G C +   +      R +           YT +I G    
Sbjct: 251 REMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSE 310

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
              K+  + +  M   G++P  Y Y  LIH YC  G + +   L ++M    +  N V  
Sbjct: 311 MKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIV 370

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           ++++  LC+     E      + + +GI  + + YN ++D  C  G+ ++A  L N++K 
Sbjct: 371 SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 430

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
              S  VV Y  LI  +   G    A ++  EM+ERGI P  VTY IL+  F R+   ++
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E+   +   G  P+  T+  +I GLCM G +KEA    N++ +  LE     Y+ M+ 
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSAMVD 546

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK   + +A  L   ++++G++    S    +  LC +G++ +A +LL +ML L ++P
Sbjct: 547 GYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEP 606

Query: 559 SVSLYNILYRA 569
           +  +Y  L  A
Sbjct: 607 NQIMYGKLIGA 617



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 245/484 (50%), Gaps = 32/484 (6%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---- 163
           +Y ++I A+ K+    QA+   + M+ +G++      N +++  I  C  + G       
Sbjct: 334 IYGALIHAYCKAGNLLQAVALHNDMVSNGIKT-----NCVIVSSILQCLCEMGMASEVVD 388

Query: 164 -FSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F E R   + LD   + I++   C+ G + +A E+LN+++    S +VV YT+LI G C
Sbjct: 389 QFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYC 448

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G +  AK +F ++ E G+     TY +L+ G  +NGL+K+  E  + +   G+ P+  
Sbjct: 449 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 508

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T+N +I   C  GKV E     + +  +   C +  Y+ ++ G CK    ++A  L  ++
Sbjct: 509 THNRIIEGLCMAGKVKEAEAFLNTLEDK---C-LENYSAMVDGYCKANFTRKAYELFSRL 564

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              GI     +  KL+   C  GE DKA  L  ++ +    P+ + Y  LI AF + G+ 
Sbjct: 565 SKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDM 624

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           K A  +   + ERGITP  +TYT++I+ + R + + +A ++++ M++ G  PDV TY V+
Sbjct: 625 KRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVV 684

Query: 462 IHGLCMKGNMK----------------EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           + G   K N+K                +AS  ++ M E  ++P+ V Y ++I  +CK  N
Sbjct: 685 LDGHS-KVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNN 743

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A+ L  EM  +GL P+I +Y++ +   C  G    A  L+N+M   G++P     ++
Sbjct: 744 LQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSV 803

Query: 566 LYRA 569
           L+R 
Sbjct: 804 LHRG 807



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 229/448 (51%), Gaps = 11/448 (2%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC----KVELDVYSF 178
           ++A+  F +M ++GV P + T ++   ++   CS  +  L +   R        +D +++
Sbjct: 244 EEAVDVFREMEEAGVNPNAVTCST---YIEGLCSHKRSDLGYEALRALRAANWPIDTFAY 300

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             +I+G C    L +A +V   +   G +P+  IY +LI   CK G++ +A  L   +  
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+       + ++  L + G+  +  + +++ + +G+      YN ++   C  GKV E
Sbjct: 361 NGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEE 420

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             +L +EM+ R ++ +VV Y TLI G C + ++ +A+ + ++MK  GI P+++TYN L+ 
Sbjct: 421 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 480

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           GF   G   +A  L + + + G  P+  T+N +I     AG  K A   +  +E++ +  
Sbjct: 481 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE- 539

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
               Y+ ++D + +++   KA+E++S + K G      +   L+  LCM+G   +A  L 
Sbjct: 540 ---NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILL 596

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M    +EPN ++Y  +I  +C++G+  RA  +   + E+G+ P++ +Y+  I   C+ 
Sbjct: 597 ERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 656

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               EA  + N M + G+KP V  Y ++
Sbjct: 657 NCLREARDIFNDMKERGIKPDVITYTVV 684



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 197/438 (44%), Gaps = 53/438 (12%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +N V  S + + + +  + S + DQ    F +  DSG+      +N ++  + K    ++
Sbjct: 365 TNCVIVSSILQCLCEMGMASEVVDQ----FKEFRDSGIFLDEVLYNIVVDALCKLGKVEE 420

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                +E + + + LDV  +  LI G C  G L  A  +  +++E G  P++V Y  L+ 
Sbjct: 421 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 480

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL-----------FKNGLQ------ 261
           G  +NG  + A  L   IG  GL     T+  +I GL           F N L+      
Sbjct: 481 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN 540

Query: 262 --------------KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
                         +  +E + ++   G+     +   L+   C EG+  +   L + M 
Sbjct: 541 YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERML 600

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
             +V  N + Y  LI   C++  ++ A+ + D +   GI+P+VITY  +I+G+C      
Sbjct: 601 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 660

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL----------------VREM 411
           +A  +FN +K  G  P V+TY V++   SK  N KMA  L                  EM
Sbjct: 661 EARDIFNDMKERGIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEEEKMDASPFWSEM 719

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
           +E GI P  V YT+LIDS  ++++++ A  +Y  M   G  PD+ TY  L+   C +G+M
Sbjct: 720 KEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDM 779

Query: 472 KEASKLFNSMWETKLEPN 489
             A  L N M    +EP+
Sbjct: 780 DRAITLVNEMSFKGIEPD 797



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 15/233 (6%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+   C  G+ +KA  +L ++  +   PN ++Y  LI   C++GD++RA+++F  + E G
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI--HEYCN------ 292
           +     TYT++I G  +    ++  + +  M+  G+ P + TY  ++  H   N      
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARS 698

Query: 293 -------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
                  E +  +    + EM+   +  +VV Y  LI   CK   +Q+A  L D+M   G
Sbjct: 699 LQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARG 758

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           + P+++TY  L+   C  G+ D+A  L N++   G  P     +VL R   KA
Sbjct: 759 LQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKA 811



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 16/226 (7%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+AL    +ML   V P    +  L+    +     +  L F     + +  DV ++ ++
Sbjct: 590 DKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMM 649

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK-----------NGDIERAK 230
           I G C    L +A ++ N ++E G  P+V+ YT ++DG  K           +   E  K
Sbjct: 650 INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEK 709

Query: 231 M----LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           M     + ++ E+G+      YTVLI    K    +D    Y++M   G+ P + TY  L
Sbjct: 710 MDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTAL 769

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
           +   C+ G +     L +EM  + +  +    + L  G+ K  +VQ
Sbjct: 770 LSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 213/449 (47%), Gaps = 10/449 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L+   +P    +N+L+    K    D         R K    D  ++ I+I   C  G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L+ A +VLNQL      P V+ YT LI+     G ++ A  L  ++   GL     TY 
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K G+    FE    ++L G  P + +YN L+    N+GK  EG KL  +M   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +   NVVTY+ LI  LC++ +++EA  LL  MK  G++P+  +Y+ LI  FC  G  D A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                 + S+G  P +V YN ++    K G +  A ++  ++ E G +P+  +Y  +  +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
              S D  +A  M   M  +G  PD  TY  +I  LC +G + EA +L   M   +  P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN+++ G+CK      A+ +L  M   G  PN  +Y+  I  +   G   EA  L N
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567

Query: 550 QMLKLG---------LKPSVSLYNILYRA 569
            ++++          L  +  L N+L R+
Sbjct: 568 DLVRIDAISEYSFKRLHRTFPLLNVLQRS 596



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 195/386 (50%), Gaps = 1/386 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LIKG     ++ KA  V+  LE+ G  P+V  Y +LI+G CK   I+ A  +  ++    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY ++I  L   G      +   ++  +   P++ TY  LI     EG V E  
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           KL DEM  R +  ++ TYNT+I G+CKE  V  A  ++  +++ G  P+VI+YN L+   
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            + G+ ++  +L  ++ S    P+VVTY++LI    + G  + A +L++ M+E+G+TP  
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            +Y  LI +F R   ++ A E    M   G  PD+  Y  ++  LC  G   +A ++F  
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + E    PN   YN M       G+  RAL ++ EM   G+ P+  +Y+S I  LC++G 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EA  LL  M      PSV  YNI+
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIV 514



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 36/384 (9%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C +G+  ++  +L  +   G++P+V++ T LI G     +I +A  +   + + G     
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG----- 154

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                                           P ++ YN LI+ +C   ++ +  ++ D 
Sbjct: 155 -------------------------------QPDVFAYNALINGFCKMNRIDDATRVLDR 183

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR ++ + + VTYN +I  LC   ++  A ++L+Q+      P VITY  LI+     G 
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A +L +++ S G  P + TYN +IR   K G    A ++VR +E +G  P  ++Y I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+ + +     E+  ++ + M      P+V TY +LI  LC  G ++EA  L   M E  
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   Y+ +I  +C+EG    A+  L  M   G +P+I +Y++ +  LC++GK  +A 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            +  ++ ++G  P+ S YN ++ A
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSA 447



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL   +  P   +  Y  +I+A +     D+AL    +ML  G++P   T+N+++  +
Sbjct: 216 LNQLLSDNCQPTVIT--YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D+ +        K  E DV S+ IL++     G   +  +++ ++      PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y+ LI   C++G IE A  L + + E GL    ++Y  LI    + G      EF E 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  +G  P +  YN ++   C  GK  +  ++F ++     + N  +YNT+   L     
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
              A  ++ +M   GI P+ ITYN +I   C  G  D+AF L   ++S    PSVVTYN+
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF----VRSDDMEKAFEMYSLM 446
           ++  F KA   + A +++  M   G  P+E TYT+LI+       R++ ME A ++  + 
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573

Query: 447 QKSGFS 452
             S +S
Sbjct: 574 AISEYS 579



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           K+    C +G   ++  L   +   G +P V+    LI+ F    N   A  ++  +E+ 
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P    Y  LI+ F + + ++ A  +   M+   FSPD  TY ++I  LC +G +  A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            K+ N +     +P  + Y ++I     EG    AL+L+ EM  +GL P++ +Y++ I  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 535 LCQDGKWPEA-EVLLNQMLKLGLKPSVSLYNILYRA 569
           +C++G    A E++ N  LK G +P V  YNIL RA
Sbjct: 273 MCKEGMVDRAFEMVRNLELK-GCEPDVISYNILLRA 307


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 199/381 (52%), Gaps = 1/381 (0%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           + F  L+    +AG +N +  V  Q+   G  P++   T L++   K    +    +F+K
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +LG+VA  H Y VL+    K+G  +   +   +M+  GV P ++TYN LI  YC +  
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
             E   + D M    VA N+VTYN+ I G  +E R++EA RL  ++K   ++ N +TY  
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTT 312

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG+C   + D+A RL   ++S G SP VVTYN ++R   + G  + A+ L+ EM  + 
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I P  +T   LI+++ + +DM  A ++   M +SG   D+Y+Y  LIHG C    ++ A 
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +   SM E    P    Y+ ++ G+  +       +LL E  ++GL  ++A Y   I  +
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492

Query: 536 CQDGKWPEAEVLLNQMLKLGL 556
           C+  +   A+VL   M K GL
Sbjct: 493 CKLEQVDYAKVLFESMEKKGL 513



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 261/573 (45%), Gaps = 56/573 (9%)

Query: 11  ALTLNLISRMAKLP----PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSH-A 64
           A+T  +IS ++       P  ++S F W  S    +H+ QS S  + L+L+K   H H  
Sbjct: 42  AITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQS-SWKMILILTK---HKHFK 97

Query: 65  AAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQ 124
            A  L+ K+    + SS    RSL+  +      S +P   S ++  ++  + K+ + + 
Sbjct: 98  TAHQLLDKLAQRELLSSPLVLRSLVGGV------SEDPEDVSHVFSWLMIYYAKAGMIND 151

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           ++  F Q+   G++P       LL  ++K    D  W  F                    
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIF-------------------- 191

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
                          ++ ++G   N+ +Y  L+  C K+GD E+A+ L  ++ E G+   
Sbjct: 192 --------------KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPD 237

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY  LI    K  +  +     ++M+ +GV+P++ TYN  IH +  EG++ E  +LF 
Sbjct: 238 IFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR 297

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           E++  +V  N VTY TLI G C+   + EA RL + M+  G SP V+TYN ++   C+ G
Sbjct: 298 EIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
              +A RL  ++      P  +T N LI A+ K  +   A  + ++M E G+     +Y 
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416

Query: 425 ILIDSFVRSDDMEKAF-EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            LI  F +  ++E A  E++S+++K GFSP   TY  L+ G   +    E +KL     +
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEK-GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
             L  +  +Y  +I   CK      A  L   M +KGLV +   +++      + GK  E
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535

Query: 544 AEVLLNQMLKLGLKPSVSLYNIL---YRAKNNI 573
           A  L + M    L  ++ LY  +   Y   N++
Sbjct: 536 ASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 19/292 (6%)

Query: 301 KLFDEMRHREVACNVVTYNTLICGL------------------CKEMRVQEAERLLDQMK 342
           +L D++  RE+  + +   +L+ G+                   K   + ++  + +Q++
Sbjct: 101 QLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIR 160

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P++     L++       TD  +++F ++   G   ++  YNVL+ A SK+G+ +
Sbjct: 161 SCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPE 220

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+ EMEE+G+ P   TY  LI  + +     +A  +   M++SG +P++ TY   I
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HG   +G M+EA++LF  + +  +  N V Y  +I GYC+  +   ALRL   M  +G  
Sbjct: 281 HGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           P + +Y+S +  LC+DG+  EA  LL +M    ++P     N L  A   IE
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 194/393 (49%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           + Y++G L++  C+A    +A  V   +   G SPNV  Y+ LI G C+   ++ A  L 
Sbjct: 51  NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G      TY  L+ GL K G  K+  + + +M   G  P    YN LI  +  +
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + E ++LF+EM  +     V TYN+L+ G  ++      + L   M   G  PN+ T+
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+DGFC  G+  +A RLF +++S G  P VV+YN L+R     G    A  L+REM  
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR 290

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+ P  V+Y ILID + +S  ++ A +++  + KSG  PD ++Y  +I  LC  G +  
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +F  M      P+  V   ++ G C+      +  L   M +   VP I  Y+  + 
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LC+  +  +   + +++ + G  P V +  ++
Sbjct: 411 KLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 182/350 (52%)

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y  L++   K+G  +     +  +   G V   +TY  L+  L +    ++    +  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G SP++++Y+ LI   C   KV E  +L +EM       NVVTY +L+ GLCK  +++
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
           EA  L  +M   G  P+ + YN LIDGF   G+  +A+RLF ++   G  P+V TYN L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             FS+ G       L ++M  +G  P+  T+  L+D F +  DM +A  ++  M+  G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PDV +Y  L+ G+C KG   EA +L   M  + + P+ V YN++I GY K G    A++L
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
             E+ + GL P+  SYS+ I  LC+ GK   A V+   M+  G  P  ++
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 162/320 (50%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +Y  L+  L K+G     +  Y  M   G  P+ YTY  L+   C   +  E   +F  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             +  + NV +Y+ LI GLC+  +V EA  LL++M   G  PNV+TY  L+ G C  G+ 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
            +A  LF+++   G  P  V YNVLI  FSK G+   A  L  EM E+G  P+  TY  L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           +  F R  +  +   ++  M + G  P+++T+  L+ G C  G+M EA +LF  M     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ V YN ++ G C +G  + A RLL EM   G+ P+I SY+  I    + G    A  
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           L  ++ K GL+P    Y+ +
Sbjct: 319 LFYEIPKSGLEPDAFSYSTI 338



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 6/371 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I    + +  D+A    ++M+D G +P   T+ SLL  + K     +    FS   
Sbjct: 90  YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              C  +  VY+  +LI G  + GD+ +A+ +  ++ E G  P V  Y SL+ G  + G+
Sbjct: 150 YRGCPPDGVVYN--VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
             R + LF+ +   G V    T+  L+ G  K G   +    + +M+  G  P + +YN 
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C++GK  E  +L  EM    V  ++V+YN LI G  K   +  A +L  ++  +G
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  +Y+ +ID  C AG+   AF +F  + +NG +P       L+    +      + 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L + M +    P    Y +L+    ++   +   E++  + + GFSPDV    V++  L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447

Query: 466 CMKGNMKEASK 476
             + + KEA++
Sbjct: 448 -RRSDDKEAAE 457



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 127/288 (44%), Gaps = 35/288 (12%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
             ++YN L+  L K  R        + M  AG  PN  TY  L+   C A   ++A  +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 374 NQLKSNGQSPSVVTYNVLI-----------------------------------RAFSKA 398
             + + G SP+V +Y++LI                                       K 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G  K A DL   M  RG  P  V Y +LID F +  DM +A+ ++  M + G  P V+TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+ G   KG       LF  M      PN   +N ++ G+CK G+   A RL  EM  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G  P++ SY++ +  +C  GK  EA+ LL +M++ G+ P +  YNIL
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 170/390 (43%), Gaps = 15/390 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
           +A S+F   + QG      S SI++  L           A  L+ ++I G    +  T  
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE---AAELLNEMIDGGHQPNVVTYG 126

Query: 87  SLLCHLTQLFPSSSNPVTKSRL-----------YESIIDAHLKSRLSDQALFYFHQMLDS 135
           SLL  L ++          SR+           Y  +ID   K     +A   F +ML+ 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P   T+NSLL    +   F +    F +  R     ++++F  L+ G C+ GD+ +A
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +  ++  +G  P+VV Y +L+ G C  G    A+ L R++   G+     +Y +LI G
Sbjct: 247 HRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             K+G      + + ++  +G+ P  ++Y+ +I   C  GKV   F +F +M     A +
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
                 L+ GLC+  R+ E+  L   M      P +  YN L+   C A  +D    +F+
Sbjct: 367 AAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFH 426

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           +L   G SP V    V++    ++ + + A
Sbjct: 427 ELTERGFSPDVEISKVILETLRRSDDKEAA 456


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 193/358 (53%), Gaps = 5/358 (1%)

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           L+    + G ++ A  +FR++  L  +   +    ++ GL K    +  +E +++M   G
Sbjct: 117 LVIALSQMGLLDEALYVFRRLWTLPALPACNA---VLDGLVKARRSRCAWELFDEMLRRG 173

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + PS+ TYN LI+    +G V++  +++D+M  R++  NV+TY ++IC LC+E  + +AE
Sbjct: 174 MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           RL D MK AG+ PN  TYN L+ G C   + + AF L+ +L ++G  P+ V +  LI  F
Sbjct: 234 RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            KA     A D+ R+M   G+ P+   Y  L+D   RS D ++A  +Y  M + G  PD 
Sbjct: 294 CKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDE 353

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +T  +++ GLC  G ++ A++    + E  +  N   YN +I  YC+ GN   AL     
Sbjct: 354 FTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTR 413

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY--RAKN 571
           M E G+ PN+ SYSS I    + GK   A  +  +M+  G++P+V  Y  L    AKN
Sbjct: 414 MTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 471



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 218/468 (46%), Gaps = 21/468 (4%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFG 179
           L D+AL+ F ++      P     N++L  ++K+      W  F E  R  +   V ++ 
Sbjct: 126 LLDEALYVFRRLWTLPALP---ACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYN 182

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            LI  C   G + KA E+ +Q+      PNV+ YTS+I   C+ G I  A+ LF  + E 
Sbjct: 183 TLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEA 242

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+   Q+TY VL+ G  +       F  Y+++  +G+ P+   +  LI  +C   + SE 
Sbjct: 243 GMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEA 302

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             +F +M    VA  V  YN+L+ G  +    QEA  L  +M   G+ P+  T + ++ G
Sbjct: 303 KDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRG 362

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            CD G+   A R    ++ +G + +   YN LI  + + GN + A      M E G+ P+
Sbjct: 363 LCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPN 422

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            V+Y+ LID   +   M+ A  +Y+ M   G  P+V TY  LIHG    G +  A +   
Sbjct: 423 VVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHK 482

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE-----------------MNEKGLV 522
            M E  + PN +  ++++ G C+E     A+R + E                   E+ L+
Sbjct: 483 EMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLI 542

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           PN A Y + I  L  DG+  EA  L + M K G+      Y +L R +
Sbjct: 543 PNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQ 590



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 230/470 (48%), Gaps = 26/470 (5%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD----KGWLFFSE 166
           +++D  +K+R S  A   F +ML  G+ P   T+N+L    I +C +     K    + +
Sbjct: 148 AVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTL----INACRYQGAVAKAQEMWDQ 203

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + ++ +V ++  +I   CE G +  A  + + ++E G  PN   Y  L+ G C+  D
Sbjct: 204 MVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDD 263

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A +L++++   GL+     +T LI G  K     +  + +  M   GV+P++  YN 
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+      G   E   L+ EM    +  +  T + ++ GLC   ++Q A R L+ ++  G
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++ N   YN LID +C  G  ++A     ++   G  P+VV+Y+ LI   SK G  ++A 
Sbjct: 384 VNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAM 443

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +  EM  +GI P+ VTYT LI    ++  ++ AF  +  M ++G SP+  T  VL+ GL
Sbjct: 444 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503

Query: 466 CMKGNMKEASKL--------------FNSMWETKLEP---NDVVYNMMIFGYCKEGNSYR 508
           C +  +++A +               F S + T+ EP   N  +Y  +I+G   +G  Y 
Sbjct: 504 CRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYE 563

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           A +L   M + G++ +  +Y+  I   C  G    A +L   M+K+G+KP
Sbjct: 564 AGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 171/436 (39%), Gaps = 88/436 (20%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSEN 167
           Y ++I+A        +A   + QM+   + P   T+ S++ +   + C  D   LF +  
Sbjct: 181 YNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMK 240

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  + Y++ +L+ G C+  D+N AF +  +L   G  PN V++T+LIDG CK     
Sbjct: 241 EAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFS 300

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT----- 282
            AK +FR +   G+  T   Y  L+ G F++G  ++    Y++M   G+ P  +T     
Sbjct: 301 EAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVV 360

Query: 283 ------------------------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                                         YN LI EYC  G + E       M    V 
Sbjct: 361 RGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVE 420

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            NVV+Y++LI G  K  ++Q A  +  +M   GI PNV+TY  LI G    G  D AFR 
Sbjct: 421 PNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRF 480

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE---------------------- 410
             ++  NG SP+ +T +VL+    +    + A   V E                      
Sbjct: 481 HKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEP 540

Query: 411 ------------------------------MEERGITPSEVTYTILIDSFVRSDDMEKAF 440
                                         M + G+     TYT+LI        +  A 
Sbjct: 541 LIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAM 600

Query: 441 EMYSLMQKSGFSPDVY 456
            +Y+ M K G  P  Y
Sbjct: 601 MLYADMMKIGVKPMRY 616



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 18/195 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y S+ID H K      A+  + +M+  G+ P   T+ +L+    K+   D  + F  E  
Sbjct: 426 YSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMI 485

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-----------------LEEMGFSPNV 210
              +  +  +  +L+ G C    +  A   + +                  EE    PN 
Sbjct: 486 ENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNS 545

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
            IY +LI G   +G    A  LF  + + G+++   TYT+LI G    G   +    Y  
Sbjct: 546 AIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYAD 605

Query: 271 MQLNGVSPSLYTYNC 285
           M   GV P  Y   C
Sbjct: 606 MMKIGVKPMRYKIIC 620


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 187/347 (53%), Gaps = 1/347 (0%)

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P + T N+L+  +       + +LF  +       LD  S+G LI G C+ G+   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++L +++      N V+Y ++I G CK+  +  A  L+ ++   G+     TY+ LI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
            F  G  KD  + + K+ L  + P  YT+N L+  +C + K+ EG  +F  M  + +  +
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVTYN+L+ G      V  A+ + + M   G++P++ +YN LI+GFC   + DKA  LFN
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           ++      P+VVTYN LI   SK+G    A  LV +M +RG+ P+ +TY  +ID+  ++ 
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            ++KA  + +  +  G  P +YTY +LI GLC  G +K+A  +F  +
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 174/363 (47%), Gaps = 35/363 (9%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           MG+ PN +   +LI G C  G I +A                                  
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQA---------------------------------- 26

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
            F F++K+   G      +Y  LIH  C  G+      L   +  + V  N V YNT+I 
Sbjct: 27  -FLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIY 85

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           G+CK+  V +A  L  +M   GISPNV+TY+ LI GF   G+   A  LFN++      P
Sbjct: 86  GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKP 145

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
              T+N+L+  F K    K    +   M ++GI P  VTY  L+D +    ++  A  ++
Sbjct: 146 DGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIF 205

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M + G +PD+ +Y +LI+G C    + +A  LFN M    + PN V YN +I G  K 
Sbjct: 206 NTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKS 265

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    AL+L+ +M+++G+ PNI +Y+S I  L +  +  +A  L+ +    G++PS+  Y
Sbjct: 266 GRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTY 325

Query: 564 NIL 566
            IL
Sbjct: 326 TIL 328



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 157/295 (53%)

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P+  T N LI   C +G++ + F   D++       + V+Y TLI GLCK    + A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LL ++    +  N + YN +I G C     + AF L++++ S G SP+VVTY+ LI  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
           F   G  K A DL  ++    I P   T+ IL+D F +   M++   ++++M K G  PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           V TY  L+ G  +   +  A  +FN+M +  + P+   YN++I G+CK     +A+ L  
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           EM+ K ++PN+ +Y+S I  L + G+   A  L++QM   G+ P++  YN +  A
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           +  ++D   K R   +    F  M+  G+ P   T+NSL+    ++K  +  K  +F + 
Sbjct: 150 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKS-IFNTM 208

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  V  D+ S+ ILI G C+   ++KA  + N++      PNVV Y SLIDG  K+G I
Sbjct: 209 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRI 268

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  ++ + G+     TY  +I  LFK            K +  G+ PS+YTY  L
Sbjct: 269 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 328

Query: 287 IHEYCNEGKVSEGFKLFDEM 306
           I   C  G++ +   +F+++
Sbjct: 329 IDGLCKGGRLKDARNIFEDL 348



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 5/244 (2%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT S L        +  +L D A+  F++++   ++P   TFN L+    K     
Sbjct: 109 SPNVVTYSALISGFF---VVGKLKD-AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 164

Query: 159 KGWLFFS-ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           +G   F+   +  +  DV ++  L+ G     ++N A  + N + + G +P++  Y  LI
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +G CK   +++A  LF ++    ++    TY  LI GL K+G      +  ++M   GV 
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 284

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TYN +I       +V +   L  + + + +  ++ TY  LI GLCK  R+++A  +
Sbjct: 285 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNI 344

Query: 338 LDQM 341
            + +
Sbjct: 345 FEDL 348


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 228/493 (46%), Gaps = 53/493 (10%)

Query: 87  SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           SLL H   L   S N      L+ + ID  + S         F++ML     P +  FN 
Sbjct: 19  SLLAHFLSL---SHNRFHSKSLHFNTIDGAISS---------FNRMLRMQPPPSTVDFNK 66

Query: 147 LLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCE--AGDLNKAFEVLNQLE 202
           LL  + K        L  S   +   +  ++Y+  ILI   C    G + +A  + +++ 
Sbjct: 67  LLTSIAKM-KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMI 125

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             GF P+VV Y +LI+G CK G+   A  L   + +         Y  +I  L K+    
Sbjct: 126 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 185

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + F  + +M   G+SP ++TYN LIH  CN  +      L +EM   ++  +VV++NT++
Sbjct: 186 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 245

Query: 323 CGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
             LCKE +V EA  ++D+M +  G  PNVI+YN LI+G+C     DKA  LF ++     
Sbjct: 246 DALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 305

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL--------------- 426
            P  VTY+ LI         + A  L  EM      P+ VTY IL               
Sbjct: 306 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 365

Query: 427 --------------------IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
                               ID   R+ ++E A +++S +   G  PDV+TY ++I+GLC
Sbjct: 366 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 425

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +G + EASKLF  M E     N  +YN +  G+ +   + RA++LL EM  +G   + +
Sbjct: 426 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 485

Query: 527 SYSSTIGVLCQDG 539
           + +  + +L  DG
Sbjct: 486 TMTLFVKMLSDDG 498



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 138/275 (50%), Gaps = 3/275 (1%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC- 361
           F+ M   +   + V +N L+  + K         L  QM   GI PN+ T + LI+ FC 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 362 -DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            + G+  +A  LF+++   G  P VVTY  LI    K GN+  A  L+  M ++   P+ 
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             Y  +IDS  +   + +AF ++S M   G SPD++TY  LIH LC     K  + L N 
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG-LVPNIASYSSTIGVLCQDG 539
           M ++K+ P+ V +N ++   CKEG    A  ++ +M ++G  +PN+ SY++ I   C+  
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +  +A  L  +M +  L P    Y+ L     ++E
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 323



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 103/205 (50%), Gaps = 2/205 (0%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +N L+ + +K  +      L  +M+  GI P+  T  IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 427 IDSFVRSD--DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           I+SF   +   + +A  ++  M   GF PDV TYG LI+GLC  GN   A +L  SM + 
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
             +PN   YN +I   CK+     A  L  EM  KG+ P+I +Y+S I  LC   +W   
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             LLN+M+   + P V  +N +  A
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDA 247


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 227/474 (47%), Gaps = 22/474 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----- 157
           V  S +Y+++I A  +     +AL    +M   G  P   TFN ++  + K         
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATK 309

Query: 158 --DKGWL--FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             D+  L  F+ +N         ++G L+ G C  G LN+A ++L ++      PN  I 
Sbjct: 310 LVDRMLLRGFYPDN--------MTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAIL 357

Query: 214 TSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
            +LI+G   +G ++ A+  L   +   G      TY +L+ GL K G      +   +M 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G  P++ TY  L++  C  G + E   +  EM  R +  N V YN LIC LC++ +V 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
            A  LL +M   G  P++ TYN LI G C     D+AFRLF+ +  +G   + VTYN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
            A  + G  + A  LV +M  RG T  ++TY  LI +F +  ++EK  E+Y  M   G  
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D  +  ++I+GLC  G +  A +           P+ V YN ++ G CK G    AL L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +  +G+ P+  +Y++ I   C++G   +A +   + ++ G  PS   +N+L
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 2/380 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV--ELDVYSFGILIKGCCEAGDLNKAFE 196
           P +   N+L+   + S    +   F +E       + D++++ IL+ G C+ G L+ A +
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           ++N++   G  PNV+ Y  L++G CK G +E A ++  ++   GL      Y  LIC L 
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +            +M   G  P L+TYN LI+  C   ++ E F+LF  M       N V
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYNTLI  L +    Q+A  L++ M   G + + ITYN LI  FC  G  +K   L+ Q+
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             +G     ++ N++I    K G    A + +R+   RG  P  VTY  +++   +   +
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++A  ++  +Q  G  PD +TY   I   C +G + +A   F    E    P+++ +N++
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711

Query: 497 IFGYCKEGNSYRALRLLGEM 516
           ++   K+ N      +L E+
Sbjct: 712 VYTLLKQSNQENNFFVLDEL 731



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 208/431 (48%), Gaps = 8/431 (1%)

Query: 139 PRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
           P   +++ +L I V  +C      +F+      V   V++FGI++K  C   +++ A  +
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           L  + + G  PN ++Y +LI    +   +  A  L  ++  +G +    T+  +I GL K
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-NVV 316
                D  +  ++M L G  P   TY  L+H  C  GK++E  K+       ++ C N  
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL-----IKIPCPNNA 355

Query: 317 TYNTLICGLCKEMRVQEAERLLDQ-MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             NTLI G     +++EA+  L++ M   G  P++ TYN L+ G C  G    A  L N+
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G  P+V+TY +L+    KAG  + A  ++ EM  RG+T + V Y  LI +  R + 
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  A  + S M   G  PD++TY  LI+GLC    + EA +LF++M       N+V YN 
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I    + G   +AL L+ +M  +G   +  +Y+  I   C+ G   +   L  QM+  G
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595

Query: 556 LKPSVSLYNIL 566
           L       NI+
Sbjct: 596 LGADTISCNIM 606



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 185/391 (47%), Gaps = 9/391 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL+ G C     N  +++L++    G SP V  +  ++   C   +++ A  L R + + 
Sbjct: 192 ILVTGNCPQVATNVFYDMLSK----GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L +     +  +  E+M + G  P + T+N +IH  C   K+ + 
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R    + +TY  L+ GLC+  ++ EA ++L ++      PN    N LI+G
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLING 363

Query: 360 FCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +  +G+  +A    N+   N G  P + TYN+L+    K G+   A DLV EM  RG  P
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TY IL++   ++  +E+A  +   M   G + +   Y  LI  LC K  +  A  L 
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           + M     +P+   YN +I+G CK      A RL   M   G V N  +Y++ I  L + 
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G + +A  L+N ML  G       YN L +A
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           Q    LLD   +    P   +Y+ +++          A  +F  + S G SP+V T+ ++
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           ++A         A  L+R+M + G  P+ + Y  LI +  + + + +A ++   M   G 
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PDV T+  +IHGLC    + +A+KL + M      P+++ Y  ++ G C+ G    A +
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ-MLKLGLKPSVSLYNIL 566
           +L ++      PN A  ++ I      G+  EA+  LN+ M+  G +P +  YNIL
Sbjct: 345 ILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNIL 396



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           + G+      Y V I+ L   G  K   KL   M E  +   + ++ +++  Y K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 508 RALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPE-AEVLLNQMLKLGLKPSVSLYNI 565
           +A+RLL +M    L  P   SY   + +L   G  P+ A  +   ML  G+ P+V  + I
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVT-GNCPQVATNVFYDMLSKGVSPTVFTFGI 223

Query: 566 LYRA 569
           + +A
Sbjct: 224 VMKA 227


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 213/449 (47%), Gaps = 10/449 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L+   +P    +N+L+    K    D         R K    D  ++ I+I   C  G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L+ A +VLNQL      P V+ YT LI+     G ++ A  L  ++   GL     TY 
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K G+    FE    ++L G  P + +YN L+    N+GK  EG KL  +M   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +   NVVTY+ LI  LC++ +++EA  LL  MK  G++P+  +Y+ LI  FC  G  D A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                 + S+G  P +V YN ++    K G +  A ++  ++ E G +P+  +Y  +  +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
              S D  +A  M   M  +G  PD  TY  +I  LC +G + EA +L   M   +  P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN+++ G+CK      A+ +L  M   G  PN  +Y+  I  +   G   EA  L N
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567

Query: 550 QMLKLG---------LKPSVSLYNILYRA 569
            ++++          L  +  L N+L R+
Sbjct: 568 DLVRIDAISEYSFKRLHRTFPLLNVLQRS 596



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 195/386 (50%), Gaps = 1/386 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LIKG     ++ KA  V+  LE+ G  P+V  Y +LI+G CK   I+ A  +  ++    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TY ++I  L   G      +   ++  +   P++ TY  LI     EG V E  
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           KL DEM  R +  ++ TYNT+I G+CKE  V  A  ++  +++ G  P+VI+YN L+   
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRAL 308

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            + G+ ++  +L  ++ S    P+VVTY++LI    + G  + A +L++ M+E+G+TP  
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            +Y  LI +F R   ++ A E    M   G  PD+  Y  ++  LC  G   +A ++F  
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + E    PN   YN M       G+  RAL ++ EM   G+ P+  +Y+S I  LC++G 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
             EA  LL  M      PSV  YNI+
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIV 514



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 36/384 (9%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C +G+  ++  +L  +   G++P+V++ T LI G     +I +A  +   + + G     
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG----- 154

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                                           P ++ YN LI+ +C   ++ +  ++ D 
Sbjct: 155 -------------------------------QPDVFAYNALINGFCKMNRIDDATRVLDR 183

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR ++ + + VTYN +I  LC   ++  A ++L+Q+      P VITY  LI+     G 
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A +L +++ S G  P + TYN +IR   K G    A ++VR +E +G  P  ++Y I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+ + +     E+  ++ + M      P+V TY +LI  LC  G ++EA  L   M E  
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   Y+ +I  +C+EG    A+  L  M   G +P+I +Y++ +  LC++GK  +A 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            +  ++ ++G  P+ S YN ++ A
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSA 447



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL   +  P   +  Y  +I+A +     D+AL    +ML  G++P   T+N+++  +
Sbjct: 216 LNQLLSDNCQPTVIT--YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D+ +        K  E DV S+ IL++     G   +  +++ ++      PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y+ LI   C++G IE A  L + + E GL    ++Y  LI    + G      EF E 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M  +G  P +  YN ++   C  GK  +  ++F ++     + N  +YNT+   L     
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
              A  ++ +M   GI P+ ITYN +I   C  G  D+AF L   ++S    PSVVTYN+
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF----VRSDDMEKAFEMYSLM 446
           ++  F KA   + A +++  M   G  P+E TYT+LI+       R++ ME A ++  + 
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573

Query: 447 QKSGFS 452
             S +S
Sbjct: 574 AISEYS 579



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           K+    C +G   ++  L   +   G +P V+    LI+ F    N   A  ++  +E+ 
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P    Y  LI+ F + + ++ A  +   M+   FSPD  TY ++I  LC +G +  A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            K+ N +     +P  + Y ++I     EG    AL+L+ EM  +GL P++ +Y++ I  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 535 LCQDGKWPEA-EVLLNQMLKLGLKPSVSLYNILYRA 569
           +C++G    A E++ N  LK G +P V  YNIL RA
Sbjct: 273 MCKEGMVDRAFEMVRNLELK-GSEPDVISYNILLRA 307


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 244/514 (47%), Gaps = 43/514 (8%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS-- 154
           P  S+   ++ L  SI    L++  +  A+ +FH+ML     P    FN L   V KS  
Sbjct: 32  PPISDAAHRTLLLNSI--RTLETADAVVAVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQH 89

Query: 155 -------------------------------CSFDKGWLFFS----ENRCKVELDVYSFG 179
                                          C   K  L F+      +  +E  + +  
Sbjct: 90  YATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLN 149

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            ++ G C  GD+N A  ++ ++E +G+  N   Y +L++G CK GD   A    +K+ + 
Sbjct: 150 TIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKR 209

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE-GKVSE 298
            L      Y  ++ GL K GL  +      +M +  V P++ TYNCLI   C E G   E
Sbjct: 210 NLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWRE 269

Query: 299 GFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           G  LF+EM   + +  +V T++ L+ G CKE  +  AE ++  M   G+ PNV+TYN LI
Sbjct: 270 GVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLI 329

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
            G+C   + ++A R+F  +   G+   PSVVT+N LI  + K      A  L+ EM  +G
Sbjct: 330 AGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKG 389

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P   T+T LI  F        A E++  M++ G  P++ T  V++ GL       EA 
Sbjct: 390 LDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAV 449

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            LF +M ++ L+ + V+YN+M+ G CK G    A +LL  +  KGL  +  +Y+  I  L
Sbjct: 450 TLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGL 509

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C++G   +AE LL +M + G  P+   YN+  + 
Sbjct: 510 CREGLLDDAEELLRKMKENGCPPNKCSYNVFVQG 543



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 193/429 (44%), Gaps = 40/429 (9%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M   G+ P   T N+++  +      +   WL           +  ++G L+ G C+ GD
Sbjct: 136 MTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGD 195

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG------------- 237
            + A E L ++ +    PNVV+Y +++DG CK G +  A  L  ++G             
Sbjct: 196 TSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNC 255

Query: 238 ------------------------ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
                                   E G+V    T+++L+ G  K GL          M  
Sbjct: 256 LIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVR 315

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRV 331
            GV P++ TYN LI  YC   ++ E  ++F  M      C  +VVT+N+LI G CK   V
Sbjct: 316 IGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEV 375

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            +A  LL +M   G+ P+V T+  LI GFC+  +   A  LF  +K +GQ P++ T  V+
Sbjct: 376 DKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVV 435

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +    K      A  L R M + G+    V Y I++D   +   +  A ++ S +   G 
Sbjct: 436 LDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGL 495

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             D YTY ++I GLC +G + +A +L   M E    PN   YN+ + G  ++ +  R+ +
Sbjct: 496 KIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRK 555

Query: 512 LLGEMNEKG 520
            L  M +KG
Sbjct: 556 YLQIMKDKG 564



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 13/364 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL----F 163
           +Y +I+D   K  L  +AL   H+M    V P   T+N L+  +   C    GW      
Sbjct: 217 VYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGL---CGEFGGWREGVGL 273

Query: 164 FSENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           F+E   +  +  DV +F IL+ G C+ G L +A  V+  +  +G  PNVV Y SLI G C
Sbjct: 274 FNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYC 333

Query: 222 KNGDIERAKMLFR---KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
               +E A  +F    + GE G + +  T+  LI G  K            +M   G+ P
Sbjct: 334 LRSQMEEAMRVFGLMVREGE-GCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDP 392

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            ++T+  LI  +C   K     +LF  M+      N+ T   ++ GL K     EA  L 
Sbjct: 393 DVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLF 452

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             M  +G+  +++ YN ++DG C  G+ + A +L + +   G      TYN++I+   + 
Sbjct: 453 RAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCRE 512

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A +L+R+M+E G  P++ +Y + +   +R  D+ ++ +   +M+  GF  D  T 
Sbjct: 513 GLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTA 572

Query: 459 GVLI 462
            +LI
Sbjct: 573 ELLI 576



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 3/297 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   + +  ++D   K  L  +A      M+  GV P   T+NSL+         ++   
Sbjct: 284 VPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMR 343

Query: 163 FFSENRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            F     + E     V +   LI G C+  +++KA  +L+++   G  P+V  +TSLI G
Sbjct: 344 VFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGG 403

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C+      A+ LF  + E G V    T  V++ GL K  L  +    +  M  +G+   
Sbjct: 404 FCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLD 463

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +  YN ++   C  GK+++  KL   +  + +  +  TYN +I GLC+E  + +AE LL 
Sbjct: 464 IVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLR 523

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           +MK  G  PN  +YN  + G     +  ++ +    +K  G      T  +LIR  S
Sbjct: 524 KMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLS 580



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           ++D  LK  L  +A+  F  M+ SG+      +N +L  + K    +      S    K 
Sbjct: 435 VLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKG 494

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +++D Y++ I+IKG C  G L+ A E+L +++E G  PN   Y   + G  +  DI R++
Sbjct: 495 LKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSR 554

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
              + + + G      T  +LI  L  N   K   EF
Sbjct: 555 KYLQIMKDKGFPVDATTAELLIRFLSANEEDKSFKEF 591


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 256/571 (44%), Gaps = 64/571 (11%)

Query: 11  ALTLNLISRMA-------KLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSH 63
           +L  +LIS +         LPPL   + F++     L          L LL    ++   
Sbjct: 25  SLQFDLISHVTYRVLSDPTLPPLSCLTFFHFLPSPDLNAR-------LILLYRLFAARKF 77

Query: 64  AAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSD 123
           AA +TL+  +++  + +    P S +  L         P     L + +      +R+  
Sbjct: 78  AAMRTLLDSLVTTEVETKR--PVSDVVSLVD--ECEFEPHFVETLCDMLFRVCADNRMFR 133

Query: 124 QALFYFHQMLDSG--VRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFG 179
            AL  F  +++ G  V  RS        F  K    +    FF       +V++ V S  
Sbjct: 134 DALKVFDYVMEKGLVVEGRS-------CFXKKCNKVELCVRFFRRMVESGRVDIGVQSLT 186

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           I++   C  G++ +A E++N++   G  P V  Y +L++ C    D E    +   +   
Sbjct: 187 IVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMERE 246

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+VA+  TYT+LI     +    +  + YE+M    V   +Y Y  +I   C  G V   
Sbjct: 247 GVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRA 306

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             LFDEM  R +  N  T+  LI G+CK  +++ AE LL++M+  G+  NV+ +N ++DG
Sbjct: 307 SALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDG 366

Query: 360 FCDAGETDKAFRL-----------------------------------FNQLKSNGQSPS 384
           +C  G  D+AFRL                                    N +   G +P+
Sbjct: 367 YCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPN 426

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVT    I  + + GN       +R +E+RG+ P+ VTY  LID++ +++ +++A  + +
Sbjct: 427 VVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKA 486

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M + G  PDV+TY  LIHG C+   + EA KLFN M    +  N   Y  +I G  KEG
Sbjct: 487 EMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +  AL+L  EM   GL+P+   + + +G L
Sbjct: 547 RADEALKLYDEMMRMGLIPDDRVFEALVGSL 577



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 198/388 (51%), Gaps = 10/388 (2%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-----NRCKVELDVYSFGILIK 183
            ++M   GV P   T+N+LL     +C   K      E      R  V   + ++ ILI+
Sbjct: 205 MNEMAARGVVPTVFTYNTLL----NACVVRKDREGVDEILGLMEREGVVASLVTYTILIE 260

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
               +  + +A +V  ++ E     +V +YTS+I   C+ G++ RA  LF ++   G+V 
Sbjct: 261 WYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVP 320

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+  LI G+ K G  +      E+MQ  GV  ++  +N ++  YC  G + E F+L 
Sbjct: 321 NTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQ 380

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M  +    +V TYN L  GLCK  R +EA+R+L+ M   G++PNV+T    I+ +C  
Sbjct: 381 DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQE 440

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G   +  R    ++  G  P++VTYN LI A+SK    K A  L  EM E+G+ P   TY
Sbjct: 441 GNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTY 500

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           T LI      D +++A ++++ M   G   +V TY  +I GL  +G   EA KL++ M  
Sbjct: 501 TSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMR 560

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             L P+D V+  ++ G   + +S+ AL+
Sbjct: 561 MGLIPDDRVFEALV-GSLHKPSSHAALK 587



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 173/377 (45%), Gaps = 8/377 (2%)

Query: 196 EVLNQLEEMGFSPNVV--IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           +V++ ++E  F P+ V  +   L   C  N     A  +F  + E GLV    +     C
Sbjct: 100 DVVSLVDECEFEPHFVETLCDMLFRVCADNRMFRDALKVFDYVMEKGLVVEGRS-----C 154

Query: 254 GLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
              K    +    F+ +M  +G V   + +   ++   C  G+V    +L +EM  R V 
Sbjct: 155 FXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVV 214

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             V TYNTL+         +  + +L  M+  G+  +++TY  LI+ +  +    +A ++
Sbjct: 215 PTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKV 274

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + ++        V  Y  +I    +AGN + AS L  EM  RGI P+  T+  LI    +
Sbjct: 275 YEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCK 334

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  ME A  +   MQ  G   +V  +  ++ G C +G M EA +L + M     E +   
Sbjct: 335 AGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFT 394

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++  G CK      A R+L  M EKG+ PN+ + ++ I + CQ+G   E E  L  + 
Sbjct: 395 YNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIE 454

Query: 553 KLGLKPSVSLYNILYRA 569
           K G+ P++  YN L  A
Sbjct: 455 KRGVVPNIVTYNTLIDA 471


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 237/497 (47%), Gaps = 23/497 (4%)

Query: 42  HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSN 101
           H P SI  + +LL S M +  +    +L   +       S  TP+  L  L+ +F +S  
Sbjct: 50  HPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHL------DSKGTPKPSLVTLS-IFINSLT 102

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
            + +  L  S++   +K         +    L  G+  +  TF +L ++     +  KG+
Sbjct: 103 HLGQMGLAFSVMAKIVKRGFGVDP--FTLTTLMKGLCLKGRTFEALNLY---DHAVSKGF 157

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F          D   +G LI G C+ G    A E+L ++E+ G  PN+++Y  ++DG C
Sbjct: 158 SF----------DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN-GVSPSL 280
           K G +  A  L  ++   G+     TY  LI G    G  +       +M +   V P +
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YT+N L+   C  G V+E   +F  M  R +  +VV+ N L+ G C    + EA+ + D+
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   G  PNVI+Y+ LI+G+C     D+A RL  ++      P  VTYN L+   SK+G 
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
                DLV  M   G  P  +TY +L+D +++ + ++KA  ++  +  +G SP++ TY +
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GLC  G MK A ++F  +      PN   YN+MI G  +EG    A  LL EM + G
Sbjct: 448 LIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDG 507

Query: 521 LVPNIASYSSTIGVLCQ 537
             PN  ++   +  L +
Sbjct: 508 FPPNAVTFDPLVRALLE 524



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 208/398 (52%), Gaps = 1/398 (0%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           +D ++   L+KG C  G   +A  + +     GFS + V Y +LI+G CK G    A  L
Sbjct: 124 VDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIEL 183

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            RK+ + G+      Y +++ GL K GL  +      +M   G+   ++TYN LIH +C 
Sbjct: 184 LRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCG 243

Query: 293 EGKVSEGFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            G+     +L +EM  +E V  +V T+N L+  LCK   V EA  +   M   G+ P+V+
Sbjct: 244 AGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVV 303

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + N L++G+C  G   +A  +F+++   G+ P+V++Y+ LI  + K      A  L+ EM
Sbjct: 304 SCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEM 363

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +R + P  VTY  L+D   +S  +   +++   M+ SG +PD+ TY VL+     +  +
Sbjct: 364 HQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECL 423

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +A  LF  + +T + PN   YN++I G CK G    A  +   ++ KG  PNI +Y+  
Sbjct: 424 DKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIM 483

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I  L ++G   EAE LL +M+  G  P+   ++ L RA
Sbjct: 484 INGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 2/224 (0%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGNSKMASD 406
           P++++ NKL+              L + L S G   PS+VT ++ I + +  G   +A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ ++ +RG      T T L+          +A  +Y      GFS D   YG LI+GLC
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G  ++A +L   M +  + PN ++YNM++ G CKEG    A  L  EM  KG+  ++ 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQM-LKLGLKPSVSLYNILYRA 569
           +Y+S I   C  G++  A  LLN+M +K  ++P V  +NIL  A
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDA 276


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 267/541 (49%), Gaps = 20/541 (3%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
           LQ  P +  +  RL +  + S  H   +T+   II   I  ++F    L   + Q   +S
Sbjct: 68  LQEQPDT-RLGFRLFIWSLKSW-HLRCRTVQDLIIGKLIKENAF---ELYWKVLQELKNS 122

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +  ++ S  +  +I+A+ ++ + ++A+  F  M D   +P    FN +L F+++  +F  
Sbjct: 123 AIKIS-SEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               +++  +C +  DV ++GILI G C+      A  + +++ + G  PN +IY+ ++ 
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C+   I  A+ LF K+   G      TY VL+ G  K+G   D F   + +  +G   
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            +  Y CLI+      +  E    + +M    +  +V+ Y  +I GL +E RV EA  LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ P+ I YN LI GFCD G  D+A  L  ++  +   P+  TY++LI    K 
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA----FEMYSLMQKSGFSP- 453
           G    A  + +EME+ G  PS VT+  LI+   +++ +E+A    ++M  + + S F   
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481

Query: 454 --------DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
                   D+ +  V++  LC  G + +A KL   + ++ + P+   YN++I G+CK GN
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A +L  EM  KG +P+  +Y + I  L + G+  +A  +  QM+K G  P  S Y  
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 566 L 566
           +
Sbjct: 602 I 602



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 16/431 (3%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+   + NP   +  Y  +I    K+  +  AL  F +M D G+ P    ++ +L  + +
Sbjct: 188 QMLKCNLNPDVVT--YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQ 245

Query: 154 SCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
           +   FD   LF          D+ ++ +L+ G C++G L+ AF +L  L + G    V+ 
Sbjct: 246 AKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIG 305

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y  LI+G  +    E A M ++K+    +      YT++I GL + G   +      +M 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ P    YN LI  +C+ G + E   L  E+   +   N  TY+ LICG+CK   + 
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK-----------SNGQ 381
           +A+ +  +M+  G  P+V+T+N LI+G C A   ++A  LF Q++           S G 
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 382 SP--SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
                + +  V++    ++G    A  L+ ++ + G+ P   TY ILI+ F +  ++  A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F+++  MQ  G  PD  TYG LI GL   G  ++A ++F  M +    P    Y  ++  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 500 YCKEGNSYRAL 510
            C+E N   AL
Sbjct: 606 SCRENNISLAL 616



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 13/289 (4%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ DV  + I+I+G  + G + +A  +L ++ E G  P+ + Y +LI G C  G ++
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  +I +       HTY++LICG+ KNGL       +++M+  G  PS+ T+N LI
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 288 HEYCNEGKVSEGFKLFDEM-------------RHREVACNVVTYNTLICGLCKEMRVQEA 334
           +  C   ++ E   LF +M             +  +   ++ +   ++  LC+   + +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +LL Q+  +G+ P++ TYN LI+GFC  G  + AF+LF +++  G  P  VTY  LI  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             +AG ++ A ++  +M ++G  P   TY  ++    R +++  A  ++
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 132/272 (48%), Gaps = 2/272 (0%)

Query: 299 GFKLFD-EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           GF+LF   ++   + C  V  + +I  L KE   +   ++L ++K + I  +   ++ LI
Sbjct: 77  GFRLFIWSLKSWHLRCRTVQ-DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLI 135

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           + + +AG  +KA   F+ ++     P +  +N+++    +     +A  +  +M +  + 
Sbjct: 136 EAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLN 195

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  VTY ILI    ++   + A  ++  M   G  P+   Y +++ GLC    + +A +L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F+ M  +    + + YN+++ G+CK G    A  LL  + + G +  +  Y   I  L +
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFR 315

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++ EA +   +ML+  +KP V LY I+ R 
Sbjct: 316 ARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 127/270 (47%)

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           +K+  E+++  +  +   ++ LI    +    ++A      M+     P++  +N ++  
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
                    A  ++NQ+     +P VVTY +LI    K   ++ A  L  EM +RGI P+
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           ++ Y+I++    ++  +  A  ++S M+ SG + D+ TY VL++G C  G + +A  L  
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            + +       + Y  +I G  +      A     +M  + + P++  Y+  I  L Q+G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  EA  LL +M + GL+P    YN L + 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKG 382


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 48/401 (11%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLN----------QLEEMGFSPNVVIYTSLIDGCCKNGD 225
           + F + I+GC   G+L      LN          ++ + GF  NV ++  L++  CK G+
Sbjct: 199 HRFDVPIRGC---GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           I  A+ +F +I                    K  LQ                P++ ++N 
Sbjct: 256 ISDAQKVFDEIT-------------------KRSLQ----------------PTVVSFNT 280

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI+ YC  G + EGF+L  +M       +V TY+ LI  LCKE ++  A  L D+M   G
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN + +  LI G    GE D     + ++ S G  P +V YN L+  F K G+   A 
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++V  M  RG+ P ++TYT LID F R  D+E A E+   M ++G   D   +  L+ G+
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G + +A +    M    ++P+DV Y MM+  +CK+G++    +LL EM   G VP++
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  +  LC+ G+   A++LL+ ML +G+ P    YN L
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 257/525 (48%), Gaps = 25/525 (4%)

Query: 23  LPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHS-HAAAQTLILKIIS--GRI 78
           LP    F+ F + S Q G + T ++  ++ R L    + H     AQ+LI  ++S  G+ 
Sbjct: 96  LPQRSIFAFFKFISSQPGFRFTVETYFVLARFL----AVHEMFTEAQSLIELVVSRKGKN 151

Query: 79  TSSSFTPRSLLCHLTQL--FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSG 136
           ++SS     +   +T +  F   +  +T + L   I DA    RLS +  F      D  
Sbjct: 152 SASSVFISLVEMRVTPMCGFLVDALMITYTDL-GFIPDAIQCFRLSRKHRF------DVP 204

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAF 195
           +R   N  + ++    K       W F+ E       L+VY F IL+   C+ G+++ A 
Sbjct: 205 IRGCGNLLDRMM----KLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQ 260

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           +V +++ +    P VV + +LI+G CK G+++    L  ++ +        TY+ LI  L
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K          +++M   G+ P+   +  LIH +   G++    + + +M  + +  ++
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           V YNTL+ G CK   +  A  ++D M   G+ P+ ITY  LIDGFC  G+ + A  +  +
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  NG     V ++ L+    K G    A   +REM   GI P +VTYT+++D+F +  D
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            +  F++   MQ  G  P V TY VL++GLC  G MK A  L ++M    + P+D+ YN 
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           ++ G+ +  NS +  R + +  E G+V ++ASY S +  L +  K
Sbjct: 561 LLEGHHRHANSSK--RYI-QKPEIGIVADLASYKSIVNELDRASK 602



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 141/256 (55%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NV  +N L+   CKE  + +A+++ D++    + P V+++N LI+G+C  G  D+ FRL 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +Q++ +   P V TY+ LI A  K      A  L  EM +RG+ P++V +T LI    R+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +++   E Y  M   G  PD+  Y  L++G C  G++  A  + + M    L P+ + Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I G+C+ G+   AL +  EM++ G+  +   +S+ +  +C++G+  +AE  L +ML+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 554 LGLKPSVSLYNILYRA 569
            G+KP    Y ++  A
Sbjct: 479 AGIKPDDVTYTMMMDA 494


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 225/480 (46%), Gaps = 39/480 (8%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCE 187
           F +M   GV P     N +L  +  +  +D      +E  +  +E  + ++  L+    +
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 188 AGDLNKAFEVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
            G  +K   +L ++E  G S  PN V Y  +I G  + G +E A  L  ++  L   A+ 
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKKASS 302

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY  LI GL   G  K   +   +M+  G+ P++ TYN +IH     G++      F E
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR   +  +V+TYN+L+ G CK    +EA  L   ++ AG++P V+TYN LIDG+C  G+
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP------- 418
            ++A RL  ++   G  P V TY +L++      +  M  +   EM  +G+ P       
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482

Query: 419 ----------------------------SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                                         VTY ILID   ++ +++ A E+   M  +G
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD  TY  LIH  C +G ++EA K FN M    L P+ V Y ++I  YC+ GN Y A 
Sbjct: 543 LQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAY 602

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
               +M E+G+ PN  +Y+  I  LC+ G+   A     +ML+ GL P+   Y +L   K
Sbjct: 603 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGK 662



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 209/434 (48%), Gaps = 7/434 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVR--PRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++D+  K    D+      +M   G    P   T+N ++  + +    ++      E
Sbjct: 234 YNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEE 293

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R   +   +++  LI G    G + K  ++  ++E  G  P VV Y ++I G  ++G I
Sbjct: 294 MRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQI 353

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A+  F ++  +GL+    TY  L+ G  K G QK+    +  ++  G++P++ TYN L
Sbjct: 354 EAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNIL 413

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  YC  G + E  +L +EM  +    +V TY  L+ G      +       D+M   G+
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL 473

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   YN  I      G+  K+F+L   +   G S   VTYN+LI    K GN K A +
Sbjct: 474 RPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEE 533

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ +M   G+ P  +TYT LI +      + +A + ++ M   G  P   TY V+IH  C
Sbjct: 534 LMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYC 593

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
            +GN+  A   F  M E  +EPN++ YN++I   C+ G +  A R   EM E+GLVPN  
Sbjct: 594 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKY 653

Query: 527 SYSSTIGVLCQDGK 540
           +Y+  I     DGK
Sbjct: 654 TYTLLI-----DGK 662



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 3/273 (1%)

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM    VA +V   N ++  L    R  +   +  +M   GI P+++TYN L+D F  
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 363 AGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
            G  DK   L  ++++ G S  P+ VTYNV+I   ++ G  + A++LV EM       S 
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASS 302

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
            TY  LI   +    ++K  ++   M+  G  P V TY  +IHGL   G ++ A   F  
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M    L P+ + YN ++ GYCK GN   AL L G++   GL P + +Y+  I   C+ G 
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
             EA  L  +M++ G  P V  Y IL +  +N+
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNV 455


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 196/416 (47%), Gaps = 35/416 (8%)

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           G L  +   C   +   +  +++ G C++G ++ A  +L+ +   G S N + Y SL+D 
Sbjct: 162 GLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDC 221

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             +  D  R + +   +   G+ AT  TYT+L+  L            + +M+ N V   
Sbjct: 222 YVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGD 281

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +Y Y  +I+ YC  G +    K+ DE     V  N  TY  LI G CK  +++ AE LL 
Sbjct: 282 VYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 341

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRL---------------FNQLKSN----- 379
            M+  G+  N I +N +IDG+C  G  D A ++               +N L        
Sbjct: 342 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 401

Query: 380 ---------------GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
                          G  P+ VTY  LI    K G+   A  L REM E+G TPS VTY 
Sbjct: 402 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 461

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
           ++ID + +   + +A      M+K GF PDVYTY  L+HG C+ G +  A KLF  M + 
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
             EPN V Y  +I G  KEG S  A +L  +M + GL+P+ + YS+ +G L  D +
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 50/110 (45%)

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           V++ GLC  G + +A +L + M    +  N + YN ++  Y ++ +  R   +L  M  +
Sbjct: 182 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 241

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+   + +Y+  +  L       + E L N+M    +   V LY  +  A
Sbjct: 242 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 291


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 238/460 (51%), Gaps = 4/460 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDV 175
           K+++ ++AL  F+Q+     +P ++T+NS+++ +++    +K    + E  N      D 
Sbjct: 143 KAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDT 202

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ +L+    + G  + A  + ++++  G  P   IYT+L+    K+GD E+A  L ++
Sbjct: 203 MTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQE 261

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + + G   T  TYT LI GL K+G  +D +  +  M  +G  P +   N LI+ +   G+
Sbjct: 262 MKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGR 321

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYN 354
           + +  KLFD+MR  + A NVVTYNT+I  L + +    EA    ++MK  G++P+  TY+
Sbjct: 322 LEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYS 381

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDGFC     +KA  L  ++   G  P    Y  LI A  KA   + A++L  E++E 
Sbjct: 382 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKEN 441

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               S   Y ++I +  +     +A ++++ M+K G +PDVY Y  L+ GL   G ++EA
Sbjct: 442 CGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEA 501

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
                +M E    P+   +N+++ G  + G   +A  +  +M +  + P+  SY++ +G 
Sbjct: 502 FSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGS 561

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           L + G + EA  L+ +M   G +     Y+ +  A   ++
Sbjct: 562 LSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVD 601



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 194/389 (49%), Gaps = 5/389 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GEL 239
           ++K   +A  +NKA  V  Q++     P    Y S+I    + G  E+   L+ ++  E 
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEG 196

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
                  TY+VL+    K G        +++M+ NG+ P+   Y  L+  Y   G   + 
Sbjct: 197 DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKA 255

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  EM+ +  A  V TY  LI GL K  RV++A  +   M   G  P+V+  N LI+ 
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINI 315

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF--SKAGNSKMASDLVREMEERGIT 417
           F  AG  + A +LF+Q++S   +P+VVTYN +I+A   SKA  S+ AS    +M+  G+T
Sbjct: 316 FGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAAS-WFEKMKANGVT 374

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS  TY+ILID F +++ +EKA  +   M + GF P    Y  LI+ L      + A++L
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 434

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F  + E     +  +Y +MI    K G    A+ L  EM + G  P++ +Y++ +  L +
Sbjct: 435 FLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVR 494

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            G   EA   L  M + G  P ++ +NI+
Sbjct: 495 AGMIEEAFSALRTMEENGCTPDLNSHNII 523



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 161/331 (48%), Gaps = 6/331 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    KS   + A   F  ML  G +P     N+L+    K+   +     F + R
Sbjct: 274 YTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMR 333

Query: 169 C-KVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K   +V ++  +IK   E+    ++A     +++  G +P+   Y+ LIDG CK   +
Sbjct: 334 SLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRV 393

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A +L  ++ E G       Y  LI  L K    +   E + +++ N    S   Y  +
Sbjct: 394 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACN--VVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
           I      G+ SE   LF+EM  +++ CN  V  YN L+ GL +   ++EA   L  M+  
Sbjct: 454 IKNLGKCGRPSEAVDLFNEM--KKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P++ ++N +++G    G  ++A  +F ++K +   P  V+YN ++ + S++G  + A
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + L+REM  RG     +TY+ ++++  + D+
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGKVDE 602



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 6/292 (2%)

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            L TY  LI    + G   E +K+  EM R           + ++  L K   V +A  +
Sbjct: 94  DLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSV 153

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFS 396
             Q+K     P   TYN +I      G  +K   L++++ + G   P  +TY+VL+ AF 
Sbjct: 154 FYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFV 213

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G    A  L  EM+  G+ P+   YT L+  + +S D EKA  +   M+  G +P V+
Sbjct: 214 KLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVF 272

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI GL   G +++A  +F +M +   +P+ V+ N +I  + K G    AL+L  +M
Sbjct: 273 TYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQM 332

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWP--EAEVLLNQMLKLGLKPSVSLYNIL 566
                 PN+ +Y++ I  L +  K P  EA     +M   G+ PS   Y+IL
Sbjct: 333 RSLKCAPNVVTYNTVIKALFE-SKAPASEAASWFEKMKANGVTPSSFTYSIL 383



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 38/286 (13%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYS 177
           RL D AL  F QM      P   T+N+++  +F  K+ + +    F       V    ++
Sbjct: 321 RLED-ALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFT 379

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           + ILI G C+   + KA  +L +++E GF P    Y SLI+   K    E A  LF ++ 
Sbjct: 380 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELK 439

Query: 238 E-----------------------------------LGLVATQHTYTVLICGLFKNGLQK 262
           E                                   +G     + Y  L+ GL + G+ +
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIE 499

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           + F     M+ NG +P L ++N +++     G+  +  ++F +M+   +  + V+YNT++
Sbjct: 500 EAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTIL 559

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             L +    +EA +L+ +M   G   + ITY+ +++      E D+
Sbjct: 560 GSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 5/152 (3%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-- 161
           + +R+Y  +I    K     +A+  F++M   G  P    +N+L+  ++++   ++ +  
Sbjct: 445 SSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSA 504

Query: 162 -LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                EN C  +L+  S  I++ G    G   +A E+  ++++    P+ V Y +++   
Sbjct: 505 LRTMEENGCTPDLN--SHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSL 562

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            ++G  E A  L R++G  G      TY+ ++
Sbjct: 563 SRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 251/520 (48%), Gaps = 20/520 (3%)

Query: 63  HAAAQTLILKIISGRITSSSFT---PRSLLCHLTQLFPSSS--------NPVTKSRLYES 111
           HA A  L  +++  R+  ++FT       LC L +   + +          V  + LY++
Sbjct: 161 HADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQT 220

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NR 168
           +I A +      +A     +ML  G     NTFN +++ +       +          + 
Sbjct: 221 VIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG 280

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C     V ++G L++G C     ++A+ +L ++ E+    NVV+  ++I GC   G + R
Sbjct: 281 CTPS--VVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLAR 334

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L+  +G  G     HTY +L+ GL K G         ++M+  G +P++ TY+ L+H
Sbjct: 335 ATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLH 394

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C  G   +   + D+M  +  + N   YN +I  L K+ ++ EA RL+ +MK  G  P
Sbjct: 395 SFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP 454

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++ TYN +I   C+  + D+A  +F  L   G   + +TYN LI A   +G  +    L 
Sbjct: 455 DICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLA 514

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM   G     V+Y  LI +  +  +++++  +   M   G  P+ ++Y +LI+ LC  
Sbjct: 515 NEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKA 574

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G +++A +L   M    L P+ V YN +I G CK G ++ AL LL ++  + + P+I +Y
Sbjct: 575 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 634

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           +  I   C+     +A +LL++ +  G+ P+   + ++ +
Sbjct: 635 NILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 168/330 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+++ IL+ G C+ G    A  +L+++EE G +PN+V Y++L+   C+NG  + A+ + 
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G       Y  +I  L K+G   +     ++M+  G  P + TYN +I+  CN 
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ E   +F  +    V  N +TYNTLI  L    R QE  RL ++M + G   +V++Y
Sbjct: 470 DQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSY 529

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  D++  L  ++ + G  P+  +YN+LI    KAG  + A +L +EM  
Sbjct: 530 NGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 589

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+TP  VTY  LI+   +      A  +   +      PD+ TY +LI   C    + +
Sbjct: 590 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 649

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           AS L +      + PN+  + MM+  + ++
Sbjct: 650 ASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 185/409 (45%), Gaps = 32/409 (7%)

Query: 193 KAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +A  +L+Q+      +P+   Y +++    +      A +L+R++    +  T  T+ V 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
              L + G  +D       M  +G  P    Y  +IH    +G V+E   L DEM     
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF- 370
           A +V T+N ++ GLC    V+EA RL+D+M M G +P+V+TY  L+ G C   + D+A+ 
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 371 ------------------------------RLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
                                          L+  + S G  P V TYN+L+    K G 
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ EMEE+G  P+ VTY+ L+ SF R+   + A  M   M   GFS +   Y  
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I+ L   G + EA +L   M     +P+   YN +I+  C       A  + G + E+G
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +V N  +Y++ I  L   G+W E   L N+M+  G    V  YN L +A
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKA 535



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 3/208 (1%)

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GITPSEV 421
           AG+ D+A  L + L  + + P +    +L    S       A  L+ +M  R  +TPS  
Sbjct: 89  AGDPDRALALLDSLPRSSRLPPLRESLLLPLLRSLPPGR--ALHLLDQMPRRFAVTPSFR 146

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +Y  ++ +  R+D    A  +Y  M +    P  +T+GV    LC  G  ++A  L   M
Sbjct: 147 SYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P+ V+Y  +I     +G    A  LL EM   G   ++ +++  +  LC  G  
Sbjct: 207 ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            EA  L+++M+  G  PSV  Y  L R 
Sbjct: 267 REAARLVDRMMMHGCTPSVVTYGFLLRG 294



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 3/157 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A  K    D+++    +M+  G++P + ++N L+  + K+    +  L  S+  
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKV-RDALELSKEM 587

Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               L  D+ ++  LI G C+ G  + A  +L +L      P++V Y  LI   CK   +
Sbjct: 588 LNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLL 647

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           + A ML  K    G+V  + T+ +++    +  +  D
Sbjct: 648 DDASMLLDKAVSGGIVPNERTWGMMVQNFVRQPVNPD 684


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 204/398 (51%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C   +   S  +++ G C++G +  A ++L+++   G   N + Y SL+D   +  D +R
Sbjct: 137 CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDR 196

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              + + +   G+  T  TYT+L+ GL            +E+M+   +S  +Y Y+ +I+
Sbjct: 197 VAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVIN 256

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G V    ++FDE     +  N  TY  LI G CK  +++ AE L+  M++ G+  
Sbjct: 257 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N I +N +IDG+C     DKA  +   ++  G    V TYN L     +A     A +L+
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
           R M E+G+ P+ V+YT LI       DM +A  ++  M  +G  P + TY V++ G   K
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G+++EA +    M +  L P+   Y  ++ G+C  G    ALRL  EM ++G  PN+ +Y
Sbjct: 437 GSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 496

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++ I  L ++G+  EA  L + ML  GL P  +LY+ L
Sbjct: 497 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 445 LMQKSGFSPDVYT---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           L Q +   PD  T     V++ G C  G +  A +L + M    ++ N + YN ++  Y 
Sbjct: 130 LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 189

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           +E +  R   +L  M  +G+ P + +Y+  +  L       + E +  +M    L   V 
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249

Query: 562 LYNILYRA 569
            Y+ +  A
Sbjct: 250 FYSSVINA 257


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 267/541 (49%), Gaps = 20/541 (3%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
           LQ  P +  +  RL +  + S  H   +T+   II   I  ++F    L   + Q   +S
Sbjct: 68  LQEQPDT-RLGFRLFIWSLKSW-HLRCRTVQDLIIGKLIKENAF---ELYWKVLQELKNS 122

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           +  ++ S  +  +I+A+ ++ + ++A+  F  M D   +P    FN +L F+++  +F  
Sbjct: 123 AIKIS-SEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181

Query: 160 GWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
               +++  +C +  DV ++GILI G C+      A  + +++ + G  PN +IY+ ++ 
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G C+   I  A+ LF K+   G      TY VL+ G  K+G   D F   + +  +G   
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            +  Y CLI+      +  E    + +M    +  +V+ Y  +I GL +E RV EA  LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            +M   G+ P+ I YN LI GFCD G  D+A  L  ++  +   P+  TY++LI    K 
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA----FEMYSLMQKSGFSP- 453
           G    A  + +EME+ G  PS VT+  LI+   +++ +E+A    ++M  + + S F   
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481

Query: 454 --------DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
                   D+ +  V++  LC  G + +A KL   + ++ + P+   YN++I G+CK GN
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
              A +L  EM  KG +P+  +Y + I  L + G+  +A  +  QM+K G  P  S Y  
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 566 L 566
           +
Sbjct: 602 I 602



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 16/431 (3%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+   + NP   +  Y  +I    K+  +  AL  F +M D G+ P    ++ +L  + +
Sbjct: 188 QMLKCNLNPDVVT--YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQ 245

Query: 154 SCS-FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
           +   FD   LF          D+ ++ +L+ G C++G L+ AF +L  L + G    V+ 
Sbjct: 246 AKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIG 305

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
           Y  LI+G  +    E A M ++K+    +      YT++I GL + G   +      +M 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G+ P    YN LI  +C+ G + E   L  E+   +   N  TY+ LICG+CK   + 
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK-----------SNGQ 381
           +A+ +  +M+  G  P+V+T+N LI+G C A   ++A  LF Q++           S G 
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 382 SP--SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
                + +  V++    ++G    A  L+ ++ + G+ P   TY ILI+ F +  ++  A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
           F+++  MQ  G  PD  TYG LI GL   G  ++A ++F  M +    P    Y  ++  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 500 YCKEGNSYRAL 510
            C+E N   AL
Sbjct: 606 SCRENNISLAL 616



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 13/289 (4%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ DV  + I+I+G  + G + +A  +L ++ E G  P+ + Y +LI G C  G ++
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ L  +I +       HTY++LICG+ KNGL       +++M+  G  PS+ T+N LI
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 288 HEYCNEGKVSEGFKLFDEM-------------RHREVACNVVTYNTLICGLCKEMRVQEA 334
           +  C   ++ E   LF +M             +  +   ++ +   ++  LC+   + +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
            +LL Q+  +G+ P++ TYN LI+GFC  G  + AF+LF +++  G  P  VTY  LI  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             +AG ++ A ++  +M ++G  P   TY  ++    R +++  A  ++
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 131/272 (48%), Gaps = 2/272 (0%)

Query: 299 GFKLFD-EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           GF+LF   ++   + C  V  + +I  L KE   +   ++L ++K + I  +   ++ LI
Sbjct: 77  GFRLFIWSLKSWHLRCRTVQ-DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLI 135

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           + + +AG  +KA   F  ++     P +  +N+++    +     +A  +  +M +  + 
Sbjct: 136 EAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLN 195

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P  VTY ILI    ++   + A  ++  M   G  P+   Y +++ GLC    + +A +L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
           F+ M  +    + + YN+++ G+CK G    A  LL  + + G +  +  Y   I  L +
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFR 315

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             ++ EA +   +ML+  +KP V LY I+ R 
Sbjct: 316 ARRYEEAHMWYQKMLRENIKPDVMLYTIMIRG 347



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 161/369 (43%), Gaps = 37/369 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---- 164
           Y  +I    K+ L ++A   F +M   G  P   TFNSL+  + K+   ++  L F    
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 165 -----------SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
                      S+   KV  D+ S  ++++  CE+G + KA+++L QL + G  P++  Y
Sbjct: 471 IVRKPSLFLRLSQGTDKV-FDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             LI+G CK G+I  A  LF+++   G +    TY  LI GL++ G  +D  E +E+M  
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVS----------EGFKLFDEMRHREVACNVVTYNTLIC 323
            G  P   TY  ++   C E  +S            F+ +++ + R VA +         
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF-------- 641

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
                  +Q A R L +M +   + ++  Y   + G   A    +AF +F+ LK    + 
Sbjct: 642 ---DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNI 698

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           S  +  +LI       N  MA D+     ERG          L+ + +  D  + A  + 
Sbjct: 699 SSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLA 758

Query: 444 SLMQKSGFS 452
           + M+ SG+ 
Sbjct: 759 NRMEASGYD 767



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 127/270 (47%)

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           +K+  E+++  +  +   ++ LI    +    ++A      M+     P++  +N ++  
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHF 172

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
                    A  ++NQ+     +P VVTY +LI    K   ++ A  L  EM +RGI P+
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           ++ Y+I++    ++  +  A  ++S M+ SG + D+ TY VL++G C  G + +A  L  
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            + +       + Y  +I G  +      A     +M  + + P++  Y+  I  L Q+G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  EA  LL +M + GL+P    YN L + 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKG 382


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 213/423 (50%), Gaps = 26/423 (6%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +++++++ + I+I G C+ G + +A  +L+++  +G  P+   Y SL+DG CK G + +A
Sbjct: 379 RLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
              +  +   G  AT  TY  L+ G    G   D    +  M   G++P+  + + L+  
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +   GK  +   L+ E   R +A N  T+NT+I GLCK  R+ EAE L+D+MK     P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           +ITY  L  G+C  G+ D+A R+ N+L++ G +P++  +N LI     A      +D++ 
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  RG++P+ V Y  LI  + +  D+  A+ +Y  M + G  P+++    L+     KG
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 470 NMKEASKLFNSMWETKLEPN--------------------------DVVYNMMIFGYCKE 503
              EA+ +  ++  T + P+                           +++N++IFG CK 
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL 738

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A  LL ++ +KG V +  +YSS I      G    A  L + ML +GL P++  Y
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 564 NIL 566
           N L
Sbjct: 799 NSL 801



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 222/470 (47%), Gaps = 37/470 (7%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F QM  +G  P   T   +     K         F  E  +  VE+++ ++  ++ G CE
Sbjct: 231 FEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCE 290

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE-LGLVATQH 246
            G  N A  +L+ L   GFSPN+V YT L+ G C   ++E A+ + ++I +   LV  + 
Sbjct: 291 VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +  +I G  + G  +D      +M  + +  +L+ YN +I+ YC  G++ E   +  EM
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               V  +  +YN+L+ G CK+  + +A    + M   G +   +TYN L+ GFC  G  
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A RL+  +   G +P+ ++ + L+  F K+G ++ A +L +E   RG+  +  T+  +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN------- 479
           I+   + + M +A E+   M++    PD+ TY  L  G C  G+M  AS++ N       
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 480 ----------------------------SMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
                                        M    L PN V Y  +I G+CKEG+ + A  
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           L  EM EKGLVPN+   SS +    + GK+ EA ++L  ++   + P +S
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 204/392 (52%), Gaps = 1/392 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           SF +L++    AG L+ A +V +++  +G   ++    S+++   + GD+     +F ++
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G +  + T  ++     K        EF E+M   GV  +L  Y+ +++ YC  G+ 
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNK 355
           ++  ++ D +  R  + N+VTY  L+ G C E  ++EAE ++ ++ K   +  +   +  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I+G+C  G  + A RL N++  +    ++  YN++I  + K G    A +++ EM   G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P   +Y  L+D + +   M KAFE Y+ M ++GF+    TY  L+ G C  G++ +A 
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +L+  M +  + PN++  + ++ G+ K G + +AL L  E   +GL  N  ++++ I  L
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
           C+  + PEAE L+++M +    P +  Y  L+
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLF 566



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 27/419 (6%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRC 169
           +++D   KS  +++AL  + + L  G+   + TFN+++  + K     +      +  + 
Sbjct: 494 TLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQW 553

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           +   D+ ++  L  G C+ GD+++A  +LN+LE +GF+P +  + SLI G        + 
Sbjct: 554 RCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKV 613

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +  ++   GL      Y  LI G  K G     +  Y +M   G+ P+L+  + L+  
Sbjct: 614 NDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSC 673

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNV--------------------------VTYNTLIC 323
           +  +GK  E   +   +   ++  ++                          + +N +I 
Sbjct: 674 FYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIF 733

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  R+++A+ LL  +K  G   +  TY+ LI G   +G  D AF L + + S G +P
Sbjct: 734 GLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTP 793

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           ++VTYN LI    K+G    A  L +++  +GI+P+ +TY  LID   +   + +AF++ 
Sbjct: 794 NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
             M + G  P V+TY +LI+GLC +G M+EA KL + M E  ++PN V Y  +I GY +
Sbjct: 854 QRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 228/486 (46%), Gaps = 27/486 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  +I+ + K     +A    H+M   GVRP + ++NSL+    K    +K +  ++  
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R        ++  L+KG C  G ++ A  +   + + G +PN +  ++L+DG  K+G  
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L+++    GL     T+  +I GL K     +  E  +KM+     P + TY  L
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
              YC  G +    ++ +E+ +   A  +  +N+LI G     +  +   +L +M   G+
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN + Y  LI G+C  G+   A+ L+ ++   G  P++   + L+  F + G    A+ 
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 407 LVREMEERGITP--------------------------SEVTYTILIDSFVRSDDMEKAF 440
           +++ +    + P                          +++ + I+I    +   +E A 
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            + + ++  GF  D +TY  LIHG    G +  A  L ++M    L PN V YN +I+G 
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           CK G   RA+ L  ++  KG+ PN  +Y++ I   C+DG   EA  L  +M++ G+ P+V
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865

Query: 561 SLYNIL 566
             Y+IL
Sbjct: 866 FTYSIL 871



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 198/437 (45%), Gaps = 27/437 (6%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D AL  +  ML  G+ P   + ++LL    KS   +K    + E   + +  +  +F  +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C+   + +A E+++++++    P+++ Y +L  G CK GD++RA  +  ++  LG 
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             T   +  LI G F         +   +M   G+SP+   Y  LI  +C EG +   + 
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV----------- 350
           L+ EM  + +  N+   ++L+    ++ +  EA  +L  +    + P++           
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVA 710

Query: 351 ---------------ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                          I +N +I G C  G  + A  L   LK  G      TY+ LI   
Sbjct: 711 NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGC 770

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
           S +G   +A DL   M   G+TP+ VTY  LI    +S ++ +A  ++  +   G SP+ 
Sbjct: 771 SASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNA 830

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  LI   C  G + EA KL   M E  + P    Y+++I G C +G    A++LL +
Sbjct: 831 ITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQ 890

Query: 516 MNEKGLVPNIASYSSTI 532
           M E  + PN  +Y + I
Sbjct: 891 MIENNVDPNYVTYWTLI 907



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 205/464 (44%), Gaps = 43/464 (9%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           +F+ LL  +  +   D     F E R     L + S   ++    + GDL     V  Q+
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           +  G  P+      +    CK   +  A     ++ ++G+      Y  ++ G  + G  
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR-HREVACNVVTYNT 320
            D     + +   G SP++ TY  L+  YCNE  + E   +  E+R ++++  +   +  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI----------------------- 357
           +I G C+  R+++A RLL++M  + +  N+  YN +I                       
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 358 ------------DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
                       DG+C  G  +KAF  +N +  NG + + +TYN L++ F   G+   A 
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L   M ++GI P+E++ + L+D F +S   EKA  ++      G + +  T+  +I+GL
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    M EA +L + M + +  P+ + Y  +  GYCK G+  RA R+L E+   G  P I
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 526 ASYSSTIG---VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++S I    +  Q GK      +L +M   GL P+   Y  L
Sbjct: 595 EFFNSLITGHFIAKQHGK---VNDILFEMSNRGLSPNTVAYGAL 635



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 168/357 (47%), Gaps = 29/357 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI--FVIKSCSFDKGWLFFSE 166
           Y ++   + K    D+A    +++ + G  P    FNSL+   F+ K        LF   
Sbjct: 562 YRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMS 621

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           NR  +  +  ++G LI G C+ GDL+ A+ +  ++ E G  PN+ I +SL+    + G  
Sbjct: 622 NR-GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680

Query: 227 ERAKMLFRKIG-------------ELGLVAT---------QHT----YTVLICGLFKNGL 260
           + A ++ + +              E+G VA           H+    + ++I GL K G 
Sbjct: 681 DEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGR 740

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            +D       ++  G     +TY+ LIH     G V   F L D M    +  N+VTYN+
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           LI GLCK   +  A  L  ++   GISPN ITYN LID  C  G   +AF+L  ++   G
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             P+V TY++LI      G  + A  L+ +M E  + P+ VTY  LI  +VR + ++
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 36/298 (12%)

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           ++E + +  +++ L+  L    ++  A ++ D+M+  G   ++ + N +++     G+  
Sbjct: 166 YKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLG 225

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
               +F Q++  G  P   T  ++ +A+ K      A + V EM + G+  + V Y  ++
Sbjct: 226 ATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVM 285

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY----------------------------- 458
           + +        A  M   +   GFSP++ TY                             
Sbjct: 286 NGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQL 345

Query: 459 -------GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
                  G +I+G C  G M++A++L N M +++L+ N  VYN+MI GYCK G    A  
Sbjct: 346 VVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHN 405

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +L EM   G+ P+  SY+S +   C+ G   +A    N ML+ G   +   YN L + 
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKG 463



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 94/167 (56%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++  LI GC  +G ++ AF++ + +  +G +PN+V Y SLI G CK+G++ RA  LF
Sbjct: 759 DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLF 818

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+   G+     TY  LI    K+G   + F+  ++M   G+ P+++TY+ LI+  C +
Sbjct: 819 KKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQ 878

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           G + E  KL D+M    V  N VTY TLI G  +   V      LDQ
Sbjct: 879 GYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 236/466 (50%), Gaps = 5/466 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +ID   K+   + AL     M ++G+ P   T N ++  + K+   D+   +F   +
Sbjct: 415 YNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLD 474

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 D  +F  LI G    G ++ A+ +  ++ +    PNVV+YTSLI    K G  E
Sbjct: 475 HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               +++++   G           +  +FK G  + G   +E+++  G+ P + +Y+ LI
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILI 594

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H     G   E +KLF EM+ + +  +V+ YNT+I G CK  +V +A +LL++MK  G+ 
Sbjct: 595 HGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQ 654

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P V+TY  ++DG       D+A+ LF + KS G   +VV Y+ LI  F K G    A  +
Sbjct: 655 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI 714

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + E+ ++G+TP+  T+  L+D+ V+++++++A   +  M+    SP+  TY ++I+GLCM
Sbjct: 715 LEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCM 774

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
                +A   +  M +  L+PN++ Y  MI G  K GN   A  L       G VP+ A 
Sbjct: 775 IRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSAC 834

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM----LKLGLKPSVSLYNILYRA 569
           Y++ I  L    K  +A ++  +      ++  K  V L + L++A
Sbjct: 835 YNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKA 880



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 263/622 (42%), Gaps = 122/622 (19%)

Query: 28  AFSLFNWASRQGLQ-HTPQSISIILRLL------------LSKMSSHSHAAAQTLILKII 74
           AF  F W  R+  Q H P+  +  L ++            L +MS      +  + ++++
Sbjct: 116 AFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELV 175

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +  + S        +  + + F     P   +  Y ++I A   +   D  L  FHQM +
Sbjct: 176 ASFVKSHKLKEAFGVIEMMRKF--KFRPAFSA--YTTLIGALSAANRPDPMLTLFHQMQE 231

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
            G                                   E +V+ F  L++     G ++ A
Sbjct: 232 IGY----------------------------------EANVHLFTTLVRVFAREGRIDAA 257

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             +L++++   F+ ++V+Y   ID   K G ++ A   F ++   GLV    TYT LI  
Sbjct: 258 LSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGV 317

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN---------------------- 292
           L K     +  E +E++ LN   P +Y YN +I  Y +                      
Sbjct: 318 LCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPS 377

Query: 293 -------------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
                        +GKV E  ++ DEMR ++ A N+ TYN LI  LCK   ++ A ++ D
Sbjct: 378 VIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQD 436

Query: 340 QMKMAGISPNVITYNKLIDGFCDA-----------------------------------G 364
            MK AG+ PN++T N +ID  C A                                   G
Sbjct: 437 TMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG 496

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             D A+ L+ ++  + Q P+VV Y  LI+ F K G  +    + +EM  RG +P  +   
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLN 556

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
             +D   ++ ++EK   ++  ++  G  PDV +Y +LIHGL   G  +E  KLF  M E 
Sbjct: 557 SYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            L  + + YN +I G+CK G   +A +LL EM  KGL P + +Y S +  L +  +  EA
Sbjct: 617 GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
            +L  +   +G+  +V +Y+ L
Sbjct: 677 YMLFEEAKSIGVDLNVVIYSSL 698



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 232/493 (47%), Gaps = 35/493 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  +  +   D+A     +    G  P    +N +L  + +    ++      E R
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI---------------- 212
                ++ ++ ILI   C+AG+L  A +V + ++E G  PN++                 
Sbjct: 406 QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465

Query: 213 -------------------YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
                              + SLIDG  + G ++ A  L+ K+ +   +     YT LI 
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
             FK G ++DG + Y++M   G SP L   N  +      G+V +G  LF+E++ + +  
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +V +Y+ LI GL K    +E  +L  +MK  G+  +V+ YN +IDGFC +G+ DKA++L 
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            ++K+ G  P+VVTY  ++   +K      A  L  E +  G+  + V Y+ LID F + 
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +++A+ +   + + G +P+ YT+  L+  L     + EA   F +M   K  PN + Y
Sbjct: 706 GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTY 765

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           ++MI G C      +A     EM ++GL PN  +Y++ I  L + G   EA  L ++   
Sbjct: 766 SIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA 825

Query: 554 LGLKPSVSLYNIL 566
            G  P  + YN +
Sbjct: 826 SGGVPDSACYNAM 838



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 231/500 (46%), Gaps = 47/500 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY   ID   K    D A  +FH+M   G+ P   T+ +L+  + K+   D+    F E 
Sbjct: 275 LYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334

Query: 167 --NR---CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             NR   C     VY++  +I G   AG  ++A+ +L + +  G  P+V+ Y  ++    
Sbjct: 335 DLNRSVPC-----VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLG 389

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           + G +E A  +  ++ +        TY +LI  L K G  +   +  + M+  G+ P++ 
Sbjct: 390 RKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T N +I   C   K+ E   +F  + H+  + +  T+ +LI GL +  RV +A  L ++M
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508

Query: 342 KMAGISPNVITYNKLIDGF--------------------CD---------------AGET 366
             +   PNV+ Y  LI  F                    C                AGE 
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           +K   LF ++K+ G  P V +Y++LI    KAG S+    L  EM+E+G+    + Y  +
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           ID F +S  ++KA+++   M+  G  P V TYG ++ GL     + EA  LF       +
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           + N V+Y+ +I G+ K G    A  +L E+ +KGL PN  +++  +  L +  +  EA+V
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQV 748

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
               M  L   P+   Y+I+
Sbjct: 749 CFQNMKNLKCSPNAMTYSIM 768



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 171/333 (51%), Gaps = 1/333 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSE 166
           L  S +D   K+   ++    F ++   G+ P   +++ L+  ++K+  S +   LF+  
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               + LDV ++  +I G C++G ++KA+++L +++  G  P VV Y S++DG  K   +
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +   +G+      Y+ LI G  K G   + +   E++   G++P+ YT+NCL
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       ++ E    F  M++ + + N +TY+ +I GLC   +  +A     +M+  G+
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN ITY  +I G   AG   +A  LF++ K++G  P    YN +I   S A  +  A  
Sbjct: 794 KPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYI 853

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           +  E   +G   +  T  +L+D+  ++D +E+A
Sbjct: 854 VFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 182/378 (48%), Gaps = 1/378 (0%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            S+ +    +Y S+I    K    +     + +M+  G  P     NS +  V K+   +
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569

Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           KG   F E + + +  DV S+ ILI G  +AG   + +++  +++E G   +V+ Y ++I
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK+G +++A  L  ++   GL  T  TY  ++ GL K     + +  +E+ +  GV 
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
            ++  Y+ LI  +   G++ E + + +E+  + +  N  T+N L+  L K   + EA+  
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              MK    SPN +TY+ +I+G C   + +KAF  + +++  G  P+ +TY  +I   +K
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAK 809

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           AGN   A  L    +  G  P    Y  +I+    ++    A+ ++   +  G   +  T
Sbjct: 810 AGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKT 869

Query: 458 YGVLIHGLCMKGNMKEAS 475
             VL+  L     +++A+
Sbjct: 870 CVVLLDALHKADCLEQAA 887



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 4/383 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           SR + S+ID   +    D A   + +MLDS   P    + SL+    K    + G   + 
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYK 541

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E   +    D+      +    +AG++ K   +  +++  G  P+V  Y+ LI G  K G
Sbjct: 542 EMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
                  LF ++ E GL      Y  +I G  K+G     ++  E+M+  G+ P++ TY 
Sbjct: 602 FSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYG 661

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++       ++ E + LF+E +   V  NVV Y++LI G  K  R+ EA  +L+++   
Sbjct: 662 SVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 721

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN  T+N L+D    A E D+A   F  +K+   SP+ +TY+++I           A
Sbjct: 722 GLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKA 781

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
               +EM+++G+ P+ +TYT +I    ++ ++ +A  ++   + SG  PD   Y  +I G
Sbjct: 782 FVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841

Query: 465 LCMKGNMKEASKLFNSMWETKLE 487
           L       +A  +F    ET+L+
Sbjct: 842 LSSANKAMDAYIVFE---ETRLK 861



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 160/358 (44%), Gaps = 6/358 (1%)

Query: 190 DLNKAFEVLNQLE---EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
           D+N AF+    +E   +    P V  Y + +    +  +++  + +  ++   G   + H
Sbjct: 112 DVNVAFQYFRWVERKTQQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNH 169

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
               L+    K+   K+ F   E M+     P+   Y  LI       +      LF +M
Sbjct: 170 VSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQM 229

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +      NV  + TL+    +E R+  A  LLD+MK    + +++ YN  ID F   G+ 
Sbjct: 230 QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKV 289

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A++ F+++K+ G  P  VTY  LI    KA     A +L  E++     P    Y  +
Sbjct: 290 DMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I  +  +   ++A+ +    ++ G  P V  Y  ++  L  KG ++EA ++ + M +   
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA- 408

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            PN   YN++I   CK G    AL++   M E GL PNI + +  I  LC+  K  EA
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 141/363 (38%), Gaps = 65/363 (17%)

Query: 268 YEK--MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV--------- 316
           YEK   ++ G+  ++Y    ++        V E   +FDEM   EV   V+         
Sbjct: 57  YEKNEAKVEGMRKTVYDLCGVLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVA 116

Query: 317 ------------------TYNTLICGLCKEMRVQEAERLLDQMKMAGIS----------- 347
                              YN  +  + +   +   E++L++M +AG             
Sbjct: 117 FQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVA 176

Query: 348 ------------------------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
                                   P    Y  LI     A   D    LF+Q++  G   
Sbjct: 177 SFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEA 236

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +V  +  L+R F++ G    A  L+ EM+    T   V Y + ID F +   ++ A++ +
Sbjct: 237 NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFF 296

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M+  G  PD  TY  LI  LC    + EA +LF  +   +  P    YN MI GY   
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           G    A  LL     KG +P++ +Y+  +  L + GK  EA  + ++M +    P+++ Y
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTY 415

Query: 564 NIL 566
           NIL
Sbjct: 416 NIL 418


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 201/392 (51%), Gaps = 5/392 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+I    K+   D AL     M+  G  P   T + L+  + K+    +   F       
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 171 VEL---DVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDI 226
           +       +S+  L+   C+A  +++AF + + +  E    P+VV Y+ LIDG CK  ++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            RA+ L++++ +L  V    TY   + GL + G   D    YE+M   G SP + TY+ L
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +    K  +  +LF+ M  R    N VTYN L+ GLCKE +  EA  L  +M   G 
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+ +TY  L+ GFC+ G+ ++A  +F+++ S G  P VV YN L++ F +AG    A  
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGL 465
           L + M  R   P  V++ I+ID   ++  ++ A E++  M Q  G SPD+ TY  LI GL
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           C +  + EA K+F  +   KL P+   +N+++
Sbjct: 414 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 197/393 (50%), Gaps = 4/393 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL- 239
           +I+  C+AG ++ A  +L  + + G+ P++  ++ LI+  CK   I+ A+   + +    
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 240 -GLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVS 297
               ++  +Y  L+  L K       F  +  M     V P + +Y+ LI  +C   ++ 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
              KL+ +M       NV TYN  + GL ++ R+ +A+ + ++M  AG SP+VITY+ LI
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GF  A + D+A  LF  + S G  P+ VTYN L+    K      A +L R+M ERG  
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P +VTYT L+  F     +E+A E++  M   G  PDV  Y  L+ G    G   EA +L
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLC 536
           F  M   + +P+ V +N+MI G  K      A+ +   M  + G  P++ +Y+S I  LC
Sbjct: 355 FQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 414

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + +  EA  +  ++ +L L P    +N+L  A
Sbjct: 415 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 176/368 (47%), Gaps = 14/368 (3%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGE------LGLVATQHTYTVLICGLFKNGLQK 262
           N V +T+ + G CK+G IE+A    R + E           T H+    +C   K G   
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC---KAGRVD 66

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV---ACNVVTYN 319
                 E M   G  P + T++ LI+E C   K+ E  +    M +R +   A +  +YN
Sbjct: 67  SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYN 125

Query: 320 TLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           +L+  LCK  +V +A  +   M     + P+V++Y+ LIDGFC   E  +A +L+ Q+  
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
               P+V TYN  +    + G    A  +  EM   G +P  +TY+ LI  F  +   ++
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A E++  M   G  P+  TY  L+HGLC +    EA +LF  M E   +P+ V Y  +++
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G+C  G   +A+ +  EM  KG  P++ +Y+  +    + GK  EA  L   M+    KP
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 559 SVSLYNIL 566
               +NI+
Sbjct: 366 DTVSHNIM 373



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 72  KIISGRITSSSFTPRSLLCHLT------QLFPSSSNPVTKSRL------YESIIDAHLKS 119
           + IS R  SS F+  SLL  L       Q F   S  V++  +      Y  +ID   K 
Sbjct: 112 RTISTR-ASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSF 178
               +A   + QM+D    P   T+N+ L  +++          + E        DV ++
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             LI G   A   ++A E+   +   G  PN V Y  L+ G CK    + A  LFRK+ E
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G    + TYT L+ G    G  +   E +++M   G  P +  YNCL+  +   GK  E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM-AGISPNVITYNKLI 357
             +LF  M  RE   + V++N +I GL K  R+ +A  + ++M+   G SP+++TYN LI
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            G C      +A ++F ++     SP    +NVL+ A   AG+
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 483 ETKLEPNDVVYNMMIFGYCKEG---NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           E+K   N+V +   + G CK G    ++ A R + E       P+  +  S I  LC+ G
Sbjct: 4   ESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAG 63

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   A  LL  M+K G  P ++ +++L
Sbjct: 64  RVDSALSLLETMIKRGYCPDMATHSML 90


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 251/518 (48%), Gaps = 16/518 (3%)

Query: 63  HAAAQTLILKIISGRITSSSFT---PRSLLCHLTQLFPSSS--------NPVTKSRLYES 111
           HA A  L  +++  R+  ++FT       LC L +   + +          V  + LY++
Sbjct: 158 HADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQT 217

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I A +      +A     +ML  G     NTFN L++ +       +          + 
Sbjct: 218 VIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG 277

Query: 172 EL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
            +  V ++G L++G C     ++A  +L +L E+    NVV+  ++I GC   G + RA 
Sbjct: 278 CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARAT 333

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L+  +G  G     HTY++L+ GL K G         ++M+  G +P++ TY+ L+H +
Sbjct: 334 ELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 393

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C  G   +   + D+M  +  + N   YN +I  LCK+ ++ +A RL+ +MK  G  P++
Sbjct: 394 CRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI 453

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TYN +I   C+    ++A  +F  L   G   + +TYN LI A  + G  +    L  E
Sbjct: 454 CTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASE 513

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M   G     ++Y  LI +  +  +++++  +   M   G  P+ ++Y +LI+ LC  G 
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +++A +L   M    L P+ V YN +I G CK G ++ AL LL ++  + + P+I +Y+ 
Sbjct: 574 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNI 633

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
            I   C+     +A +LL++ +  G+ P+   + ++ +
Sbjct: 634 LISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 166/330 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+++ IL+ G C+ G    A  +L+++EE G +PN+V Y++L+   C+NG  + A+ + 
Sbjct: 347 DVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 406

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G       Y  +I  L K+G         ++M+  G  P + TYN +I+  CN 
Sbjct: 407 DQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNN 466

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
             + E   +F  +    V  N +TYNTLI  L +  R QE  RL  +M + G   +VI+Y
Sbjct: 467 DLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISY 526

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  D++  L  ++ + G  P+  +YN+LI    KAG  + A +L +EM  
Sbjct: 527 NGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 586

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+TP  VTY  LI+   +      A  +   +      PD+ TY +LI   C    + +
Sbjct: 587 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 646

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           A+ L +      + PN+  + MM+  + ++
Sbjct: 647 AAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 185/409 (45%), Gaps = 32/409 (7%)

Query: 193 KAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +A  +L+Q+      SP+   Y  ++    +      A +L+R++    +  T  T+ V 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
              L + G   D       M  +G  P    Y  +IH    +G V+E   L DEM     
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD---- 367
           A +V T+N L+ GLC   RV+EA RL+D+M   G  P+V+TY  L+ G C   + D    
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 368 ---------------------------KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
                                      +A  L+  + S G  P V TY++L+    K G 
Sbjct: 304 MLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGR 363

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  ++ EMEE+G  P+ VTY+ L+ SF R+   + A  M   M   GFS +   Y  
Sbjct: 364 FGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNG 423

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           +I+ LC  G + +A++L   M     +P+   YN MI+  C       A  +   + E+G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +V N  +Y++ I  L ++G+W E   L ++ML  G +  V  YN L +A
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 1/193 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I A L++    + L    +ML  G +    ++N L+  + K  + D+      E  
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K ++ + +S+ +LI   C+AG +  A E+  ++   G +P++V Y +LI+G CK G   
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  K+    +     TY +LI    K  L  D     +K    G+ P+  T+  ++
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670

Query: 288 HEYCNEGKVSEGF 300
             +  +    EG+
Sbjct: 671 QNFVRQTVNLEGY 683


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 228/478 (47%), Gaps = 39/478 (8%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           S+++  +      +A   F   L +  RP   T+ +L+    K+    +      E +  
Sbjct: 22  SLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAA 81

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +   + +FG LI+  CE    +KA ++ +Q+ +M   P+  +YT +I   CK   ++ A
Sbjct: 82  GITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 141

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
              F ++ + G +  + TYTVL+  LFK    + G + +E+M   G SP L TY  +++ 
Sbjct: 142 ASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 201

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           YC  G++ +   L   ++    + +   Y+TLI GLCK  R  EA  L +    AG   +
Sbjct: 202 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA--AGDVQD 259

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           VI Y   I G C AG+ D+A  +  ++   G +P  V+YNV+I +  K      A +L+ 
Sbjct: 260 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 319

Query: 410 EMEER----GI--------------------------------TPSEVTYTILIDSFVRS 433
           +  ER    G+                                 PS VTY+ +ID   ++
Sbjct: 320 QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKA 379

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D ++ A+ +   M+++G  PDV TY  +I   C  G + EA +LF  M E     + V Y
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           N++I GYC+      A+ ++ EM  +G+ PN+ S S+ +  LC++ +  EA +L+ +M
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 198/387 (51%), Gaps = 4/387 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           LY  +I    K    D A  YF +M+ SG  P   T+  L+  + K+C +++G   F E 
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 183

Query: 168 RCKVE-LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K    ++ ++  ++ G C+AG +++A  ++ +L+  G SP+  +Y++LIDG CK+   
Sbjct: 184 LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ LF      G V     YT  I GL K G   +    + KM   G +P   +YN +
Sbjct: 244 DEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C + +VSE  +L D+   R+    V     L+ GLCK  RV+EA  +L++M   G 
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361

Query: 347 -SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            +P+V+TY+ +IDG C A   D A+ +  +++  G  P VVTY  +I AF K G    A 
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L + M ERG     V Y ILI  + R+  +++A  M   M   G  P+V +   ++ GL
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVV 492
           C +  ++EA  L   M    L  +D V
Sbjct: 482 CKESRVEEARLLMEKMNFESLPDSDPV 508



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 236/508 (46%), Gaps = 25/508 (4%)

Query: 31  LFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
            F WA +R G QH   + + +L + ++      H  A  +    +        FT  +L+
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVN---DGCHREAYRVFKDELVTLFRPDDFTYGTLI 59

Query: 90  ---CHLTQLFPSSSNPVTKSR---------LYESIIDAHLKSRLSDQALFYFHQMLDSGV 137
              C   Q+ P + N + + +          + S+I    +   +D+AL  FHQM+D  V
Sbjct: 60  RGFCKAEQI-PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKV 118

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           +P +  +  ++  + K    D    +F    ++ C    D  ++ +L+    +A    + 
Sbjct: 119 KPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLP--DKVTYTVLVHSLFKACKWEQG 176

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            ++  ++   G SP +V Y ++++G CK G I++A  L R++   G   +   Y+ LI G
Sbjct: 177 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           L K+    +  E +E     G    +  Y   I   C  GK+ E   +  +M     A +
Sbjct: 237 LCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
            V+YN +I  LCK+ RV EA+ L+DQ       P V     L+DG C +   ++A  +  
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354

Query: 375 QLKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           ++   G ++PSVVTY+ +I    KA     A  ++++M   G  P  VTYT +ID+F + 
Sbjct: 355 RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKV 414

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             +++A E++  M + G + DV  Y +LI G C    + EA  +   M    ++PN V  
Sbjct: 415 GRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSL 474

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + ++ G CKE     A  L+ +MN + L
Sbjct: 475 STIVDGLCKESRVEEARLLMEKMNFESL 502



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 204/446 (45%), Gaps = 39/446 (8%)

Query: 126 LFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKG 184
           LF+       G +  + T NSLL +FV   C  +   +F  E       D +++G LI+G
Sbjct: 2   LFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
            C+A  + +A  +L +++  G +P +V + SLI   C+    ++A  +F ++ ++ +   
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
              YTV+I  L K         ++E+M  +G  P                          
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLP-------------------------- 155

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
                    + VTY  L+  L K  + ++  ++ ++M   G SP ++TY  +++G+C AG
Sbjct: 156 ---------DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAG 206

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             D+A  L  +LK  G+SPS   Y+ LI    K      A +L  EM   G     + YT
Sbjct: 207 RIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA-GDVQDVIVYT 264

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
             I    ++  +++A  ++  M ++G +PD  +Y V+I+ LC    + EA +L +   E 
Sbjct: 265 SFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER 324

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG-LVPNIASYSSTIGVLCQDGKWPE 543
           K  P   V  +++ G CK      A  +L  M E G   P++ +YS+ I  LC+  +  +
Sbjct: 325 KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDD 384

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A V+L +M + G  P V  Y  +  A
Sbjct: 385 AYVVLQKMRRAGCVPDVVTYTAIIDA 410


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 207/412 (50%), Gaps = 22/412 (5%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+A      M+  G  P ++T++ ++ F+ ++   +K +L F E +   V  DVY++ IL
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+ G + +A    +++E +G SP+VV YT+L+    K   + +A  +F ++ + G 
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY+ L+ GL K G  +   E Y KM   G S ++                  G  
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMI--GTSDNV------------------GSD 596

Query: 302 LFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            + E  H + +A NVVTY  LI GLCK  +V +A+ LLD M   G  PN I Y+ LIDGF
Sbjct: 597 FYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGF 656

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+ D A  +F ++   G  P+V TY  LI A  K     +A  ++ +M E   TP+ 
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNV 716

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTYT +ID   R  + +KA ++ S+M+K G +P+V TY  LI GL   G +  + +LF  
Sbjct: 717 VTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQ 776

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           M      PN V Y ++I   C  G    A  LL EM +      +  Y S +
Sbjct: 777 MITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVV 828



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 230/522 (44%), Gaps = 68/522 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------ 161
           L   +I   +++ L D+A+ + H+M  +   P   T+ +LL   +K      GW      
Sbjct: 276 LCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQL--GWCKRIIS 333

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +  +E  C     +  F  L+   C A D   A+++LN++   G  P  V+Y   I   C
Sbjct: 334 MMMNEG-CNPNPSL--FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC 390

Query: 222 KN-----------------------------------------GDIERAKMLFRKIGELG 240
                                                      G  ++A  + + +   G
Sbjct: 391 SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
            V    TY+ +I  L +    +  F  +++M+  GV P +YTY  LI  +C  G + +  
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
             FDEM     + +VVTY  L+    K  +V +A  +  +M  AG +PN ITY+ L+DG 
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570

Query: 361 CDAGETDKAFRLFNQL----------------KSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           C AGE+ KA  ++ ++                 ++  +P+VVTY  LI    KA     A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L+  M   G  P+ + Y  LID F +   ++ A E++  M K G+ P V+TY  LI  
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           +     +  A K+ + M E+   PN V Y  MI G C+ G   +AL+LL  M ++G  PN
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPN 750

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +Y+S I  L + GK   +  L  QM+  G  P+   Y +L
Sbjct: 751 VVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 220/433 (50%), Gaps = 22/433 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-------- 160
           Y +++ A+LK++   QA   FH+M+D+G  P + T+++L+  + K+    K         
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587

Query: 161 ---------WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
                    + F  E+   +  +V ++G LI G C+A  +  A E+L+ +   G  PN +
Sbjct: 588 GTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI 647

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           IY +LIDG CK G ++ A+ +F ++ + G + T HTYT LI  +FK+       +   +M
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             +  +P++ TY  +I   C  G+  +  KL   M  R    NVVTY +LI GL K  +V
Sbjct: 708 LESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             + +L  QM   G +PN +TY  LI+  C AG  D+A  L +++K       V  Y  +
Sbjct: 768 DMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSV 827

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           ++ FSK   + +   L+ E+E  G+      Y +LIDSF ++  +EKA E++  M +   
Sbjct: 828 VQGFSKKFIASLG--LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSS 885

Query: 452 SPDVY---TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           S ++    TY  LI  LC+   +++A +L++ +    + P    +  +I G  K      
Sbjct: 886 SLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNE 945

Query: 509 ALRLLGEMNEKGL 521
           AL+L   M ++G+
Sbjct: 946 ALQLCYSMCDEGV 958



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 215/521 (41%), Gaps = 61/521 (11%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           RL   I+    +     +AL    ++ D G RP   T+N+L+  +  +   D G+    E
Sbjct: 173 RLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKE 232

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +      D ++ G   +  C+ G  + A   L  +E   F  + V+ T +I G  +   
Sbjct: 233 MSELGFCTDKFTVGCFAQALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASL 289

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            + A     ++     +    TY  L+ G  K             M   G +P+   +N 
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC------------------K 327
           L+H YCN       +KL + M         V YN  I  +C                  +
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 328 EM-----------------------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           EM                       +  +A +++  M   G  P+  TY+K+I   C+A 
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + +KAF LF ++KS G  P V TY +LI +F K G  + A     EME  G +PS VTYT
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            L+ +++++  + +A +++  M  +G +P+  TY  L+ GLC  G  ++A +++  M  T
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589

Query: 485 K----------------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
                            + PN V Y  +I G CK      A  LL  M+  G  PN   Y
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + I   C+ GK   A+ +  +M K G  P+V  Y  L  A
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 154/370 (41%), Gaps = 9/370 (2%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           ++G+S     Y +L +    +      + L R+IGE           V++    ++G   
Sbjct: 130 QVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWA 189

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              E   +++  G  PS  TYN L+      G++  GF++  EM       +  T     
Sbjct: 190 KALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFA 249

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
             LCKE R  +A  ++++        + +   ++I G  +A   D+A    ++++ N   
Sbjct: 250 QALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCI 306

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  L+  F K         ++  M   G  P+   +  L+ S+  + D   A+++
Sbjct: 307 PNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKL 366

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE------ASKLFNSMWETKLEPNDVVYNMM 496
            + M   G  P    Y + I  +C    +        A K++  M  +    N V     
Sbjct: 367 LNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 426

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
               C  G   +A +++  M  KG VP+ ++YS  I  LC+  K  +A +L  +M  +G+
Sbjct: 427 ARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 486

Query: 557 KPSVSLYNIL 566
            P V  Y IL
Sbjct: 487 IPDVYTYTIL 496



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 10/315 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-- 165
           +Y+++ID   K    D A   F +M   G  P  +T+ SL+  + K    D      S  
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707

Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            E+ C    +V ++  +I G C  G+  KA ++L+ +E+ G +PNVV YTSLIDG  K+G
Sbjct: 708 LESSCTP--NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSG 765

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++ +  LF ++   G      TY VLI      GL  +      +M+       +  Y 
Sbjct: 766 KVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYC 825

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            ++  +  +   S G  L +E+    +      Y  LI    K  R+++A  L  +M   
Sbjct: 826 SVVQGFSKKFIASLG--LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEV 883

Query: 345 GISPNVI---TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             S N+    TY  LI   C A + +KAF L++++   G  P +  +  LI+   K    
Sbjct: 884 SSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKW 943

Query: 402 KMASDLVREMEERGI 416
             A  L   M + G+
Sbjct: 944 NEALQLCYSMCDEGV 958



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 43/279 (15%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSE 166
           Y S+IDA  K R  D A+    QML+S   P   T+ +++  +  I  C      L   E
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R     +V ++  LI G  ++G ++ + ++  Q+   G +PN V Y  LI+ CC  G +
Sbjct: 744 KR-GCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLL 802

Query: 227 ERAKMLFRKIGEL---------------------------------GLVATQHTYTVLIC 253
           + A  L  ++ +                                  G+V+    Y +LI 
Sbjct: 803 DEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLID 862

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLY-----TYNCLIHEYCNEGKVSEGFKLFDEMRH 308
              K G  +   E +++M    VS SL      TY  LI   C   ++ + F+L+ E+  
Sbjct: 863 SFSKAGRLEKALELHKEMM--EVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITR 920

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + V   +  +  LI GL K  +  EA +L   M   G++
Sbjct: 921 KGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 43/296 (14%)

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQE--AERLLDQMKMAGISPNVITYNKLID--GFCD 362
           RHR+   + V    L     + +R  E      L   +  G S     YN L +   F D
Sbjct: 97  RHRDFLNDAVVVAVL-----RSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDD 151

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
              T +  RL  ++  + +       NV++R   + G    A + +  +++ G  PS  T
Sbjct: 152 RARTTE--RLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGAT 209

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA-------- 474
           Y  L+     +  M+  F +   M + GF  D +T G     LC +G   +A        
Sbjct: 210 YNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIERED 269

Query: 475 --------SKLFNSMWETKL----------------EPNDVVYNMMIFGYCKEGNSYRAL 510
                   +++ + + E  L                 PN V Y  ++ G+ K+       
Sbjct: 270 FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCK 329

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           R++  M  +G  PN + ++S +   C    +P A  LLN+M   G  P   +YNI 
Sbjct: 330 RIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIF 385


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 7/464 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I+A       D+AL     +   G +P + T+  +L  +  S  + +    F+E  
Sbjct: 235 YNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA 294

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            N+C    D  +F  ++   C+ G +++A +V++ + E G  P++V Y+S++DG C  G 
Sbjct: 295 SNKCAP--DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  L  ++   G       YT ++ GL      +   E   +M  +   P   T+N 
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I   C +G V    K+ ++M       ++VTYN++I GLC E  + +A  LL  ++  G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+++T+N L+ G C     + A +L   +  +   P   T+N +I +  + G    A 
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           + ++ M E G  P++ TY I++D+ +++   ++A ++ S M     +PD+ TY  +I  +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G M+EA  L   M    L P+ + Y  + +G C+E  + RA+R+L  + + GL P+ 
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             Y+  +   CQ+ +   A      M+  G  P  S Y IL  A
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEA 694



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 212/451 (47%), Gaps = 4/451 (0%)

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
           ++ R+ D AL  F  ML  G  P   T++ LL    K+  + +  +   E R K  E D+
Sbjct: 174 VRGRVPD-ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDI 232

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++ +LI   C  GD+++A  +L+ L   G  P+ V YT ++   C +   +  + LF +
Sbjct: 233 VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +        + T+  ++  L + GL     +  + M  +G  P + TY+ ++   C+ G+
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V +  +L   ++      + + Y T++ GLC   + + AE L+ +M  +   P+ +T+N 
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I   C  G  D+A ++  Q+  NG +P +VTYN +I           A +L+  ++  G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P  VT+  L+      D  E A ++   M  S   PD  T+  +I  LC KG + +A 
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +    M E    PN   YN+++    K G +  AL+LL  M      P++ +Y++ I  +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + GK  EA  LL  M+  GL P    Y  L
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 193/402 (48%), Gaps = 6/402 (1%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           L V    ILIK  C  G +  A  V   L   G S  VV Y ++++G C+ G IE A+  
Sbjct: 96  LPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDAR-- 150

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
            R I  +       T+  LI  L   G   D    ++ M   G SPS+ TY+ L+   C 
Sbjct: 151 -RLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCK 209

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
                +   L DEMR +    ++VTYN LI  +C E  V EA  +L  +   G  P+ +T
Sbjct: 210 ASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVT 269

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  ++   C +    +   LF ++ SN  +P  VT+N ++ +  + G    A  +V  M 
Sbjct: 270 YTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           E G  P  VTY+ ++D       ++ A E+ S ++  G  PD   Y  ++ GLC     +
Sbjct: 330 EHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWE 389

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A +L   M  +   P++V +N +I   C++G   RA++++ +M+E G  P+I +Y+S I
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSII 449

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
             LC +    +A  LL+ +   G KP +  +N L +   +++
Sbjct: 450 DGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVD 491



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 195/396 (49%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++F  LI+  C  G +  A  V + +   G SP+VV Y+ L+D  CK     +A +L 
Sbjct: 161 DTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLL 220

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G      TY VLI  +   G   +       +  +G  P   TY  ++   C  
Sbjct: 221 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS 280

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +  E  +LF EM   + A + VT+NT++  LC++  V  A +++D M   G  P+++TY
Sbjct: 281 ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + ++DG CD G  D A  L ++LKS G  P  + Y  +++        + A +L+ EM  
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
               P EVT+  +I S  +   +++A ++   M ++G +PD+ TY  +I GLC +  + +
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L +++     +P+ V +N ++ G C       A +L+  M      P+  ++++ I 
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            LCQ G   +A   L  M + G  P+ S YNI+  A
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDA 556



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 212/431 (49%), Gaps = 7/431 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFGILIKGC 185
           F +M  +   P   TFN+++  + +    D+        SE+ C    D+ ++  ++ G 
Sbjct: 290 FAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP--DIVTYSSILDGL 347

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G ++ A E+L++L+  G  P+ + YT+++ G C     E A+ L  ++        +
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+  +I  L + GL     +  E+M  NG +P + TYN +I   CNE  + +  +L   
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           ++      ++VT+NTL+ GLC   R ++AE+L+  M  +   P+  T+N +I   C  G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A      +  NG  P+  TYN+++ A  KAG ++ A  L+  M     TP  +TY  
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +I +  ++  ME+A ++  +M  +G SPD  TY  L +G+C +     A ++   + +  
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           L P+   YN ++ G+C+   +  A+     M   G +P+ ++Y   +  L  +    EA+
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 546 VLLNQMLKLGL 556
            LL  +  LG+
Sbjct: 706 QLLVNLCSLGV 716


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 232/465 (49%), Gaps = 5/465 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + LY+++I A       ++A     +M   G     NTFN ++  +       +   
Sbjct: 204 VPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAAR 263

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  +    +  ++G L+KG C A  + +A  +L ++ E+    NVV++ ++I  C 
Sbjct: 264 LVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL----NVVLFNTVIGRCL 319

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
            +G ++ A  L+  +G  G     HTY++LI GL K G      +   +M+  G +PS+ 
Sbjct: 320 LDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIV 379

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  L+H +C  G       + + M  + ++ N+  YN +IC +CK+ R+ +A R + +M
Sbjct: 380 TYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEM 439

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           K  G  P++ TYN +I   C+  + ++A  LF  L   G   + +TYN LI A  + G+ 
Sbjct: 440 KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSW 499

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L  +M   G +   V+Y  LI +  R  +++++  + S M + G  P+  +Y +L
Sbjct: 500 QDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLL 559

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  LC    +++A +L   M   +L P+ V YN +I G CK G  + AL LL +++ + +
Sbjct: 560 ISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDV 619

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +I +Y+  I   C+     +A +LLN+ +  G+ P+   + I+
Sbjct: 620 HADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIM 664



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 170/330 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++ ILI G C+ G L  A ++L ++E+ GF+P++V YT L+   C+NG  +  + + 
Sbjct: 342 DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAML 401

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + GL      Y  +IC + K+    D   F ++M+  G  P + TYN +I+  CN 
Sbjct: 402 EVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ E   LF+ + H  V  N +TYNTLI  L +    Q+A  L + M + G S ++++Y
Sbjct: 462 NQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSY 521

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  D++  L +++   G  P+ V+YN+LI    K    + A +L +EM  
Sbjct: 522 NGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLN 581

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           + +TP  VTY  LI+   +   M  A  +   +       D+ TY +LI   C    + +
Sbjct: 582 QELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHD 641

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           AS L N    + + PN+  + +M+  + ++
Sbjct: 642 ASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 193/442 (43%), Gaps = 68/442 (15%)

Query: 193 KAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA-TQHTYTV 250
           +A  +L+QL      SP+   Y +++    +         L+R++     V  T  T+++
Sbjct: 118 RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSI 177

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
               L + G   +       M  +G  P    Y  +IH  C +G V+E   L DEM    
Sbjct: 178 AARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA------- 363
            + +V T+N ++ GLC   R++EA RL+D+M + G  PN ITY  L+ G C A       
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 364 ------------------------GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
                                   G+  +A  L+  + S G  P   TY++LI    K G
Sbjct: 298 TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLG 357

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVR--------------SDD---------- 435
               A  L+REME++G  PS VTYTIL+ SF R              SD           
Sbjct: 358 RLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYN 417

Query: 436 -----------MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
                      M+ A      M+  G+ PD+ TY  +I+ LC    M+EA  LF ++   
Sbjct: 418 GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE 477

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            +  N + YN +I    + G+   A+ L  +M   G   +I SY+  I  LC+DG    +
Sbjct: 478 GVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRS 537

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
            +LL++M + G+KP+   YN+L
Sbjct: 538 IMLLSEMAEKGIKPNNVSYNLL 559



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 3/310 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD--KGWLFFSENRCKVELDVYSFGILI 182
           A+    +M D G  P   T+  LL    ++  +D  +  L    ++  + +++  +  +I
Sbjct: 362 AMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK-GLSMNLEGYNGMI 420

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
              C+   ++ A   + +++  G+ P++  Y ++I   C N  +E A+ LF  +   G+V
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           A   TY  LI  L +NG  +D       M L+G S  + +YN LI   C +G V     L
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML 540

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             EM  + +  N V+YN LI  LCK  RV++A  L  +M    ++P+++TYN LI+G C 
Sbjct: 541 LSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCK 600

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G    A  L  +L +      ++TYN+LI    KA     AS L+      GITP+E T
Sbjct: 601 MGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERT 660

Query: 423 YTILIDSFVR 432
           + I++ +FVR
Sbjct: 661 WGIMVQNFVR 670


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 234/470 (49%), Gaps = 15/470 (3%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S +PV  + +   + DA    R +  A+  F +M + G    +  +N L+  + K+   D
Sbjct: 43  SPDPVELNTILAELCDA----RDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLD 97

Query: 159 K--GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           +  G L   ++R  +        ++I G C AG L  A  V  Q+ +    P+ + YT L
Sbjct: 98  EAMGLLLDMKSR-GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKL 155

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           + G  K G +  A  + +++     V    T TV++  L       D  E  E+M   G+
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLF-DEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           + +  TY+ L+   C   ++ E   L   E+  R    ++VTY+T+I GLCK  R+++A 
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            + ++M  A   P  ITYN LI G+C AG+ D+A RL  ++  +  +P V+TY  L+ AF
Sbjct: 276 DIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G    A +L ++M    ++P  VT+T L+D       ME A E+   + + G  P +
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           YTY  ++ G C    +++A +L          PN V YN+++ G C+ G + +AL+ L +
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 452

Query: 516 MN-EKGLVP-NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           +N E G  P ++A Y+  +  LC+DG+  +A     +M++ G  P+ + +
Sbjct: 453 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 224/453 (49%), Gaps = 6/453 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I    K+RL D+A+     M   G+ P +   N ++  + ++         + +  
Sbjct: 83  YYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN 142

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                D  ++  L+ G  +AG L  A +VL ++      P+    T ++   C    ++ 
Sbjct: 143 DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDD 202

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFK-NGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           A+ L  ++   G+ A   TY+ L+ GL K   L +       ++   G +P + TY+ +I
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI 262

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G++ +   +F+EM     A   +TYN+LI G C+   + EA RLL +M     +
Sbjct: 263 DGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCA 319

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VITY  L+  FC  G  D A+ LF Q+ +N  SP VVT+  L+      G  + A +L
Sbjct: 320 PDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 379

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + E+  RG  P+  TY  ++D + +S+ + KA E+ +  +  GF P+  TY +L+ G C 
Sbjct: 380 LEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 439

Query: 468 KGNMKEASKLFNSM-WETKLEPNDV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
            G   +A +  + +  E    P  V +Y +++   C++G +  A++   EM ++G VP  
Sbjct: 440 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 499

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           A++++ +  LC+  +  +A  LL +M+K G  P
Sbjct: 500 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 204/438 (46%), Gaps = 8/438 (1%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           MLD+G    S+TF  +L  +  S      G L   E R + +  D      ++   C+A 
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           D   A  + +++ E+G + N   Y +LI   CK   ++ A  L   +   G+      + 
Sbjct: 61  DTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           V+I GL + G  +     Y +M  +   P   TY  L+H     G++ +  ++  EM   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +  T   ++  LC   RV +A  L+++M   G++ N ITY+ L+DG C     D+A
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 370 FRLF-NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
             L   ++   G +P +VTY+ +I    KAG  + A D+  EM      P+ +TY  LI 
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIG 295

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
            + R+ DM++A  +   M     +PDV TY  L+   C  G + +A +LF  M   KL P
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V +  ++ G C EG    AL LL E+  +G  P I +Y+  +   C+  +  +AE L+
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV 415

Query: 549 NQMLKLGLKPSVSLYNIL 566
                 G  P+   YNIL
Sbjct: 416 ADFRSRGFVPNTVTYNIL 433



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 181/363 (49%), Gaps = 7/363 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG--WLFFSENRCKVELDVYSFGI 180
           D A     +ML  G+   + T+++L+  + K    D+    L     R     D+ ++  
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I G C+AG L  A ++    EEM  +P  + Y SLI G C+ GD++ A  L  K+ +  
Sbjct: 261 VIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                 TYT L+    K G   D +E +++M  N +SP + T+  L+   C EG++ +  
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L +E+  R     + TYN ++ G CK  +V++AE L+   +  G  PN +TYN L+ G 
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437

Query: 361 CDAGETDKAFRLFNQLKSNGQ--SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           C AG TD+A +  +QL S G     SV  Y +++ A  + G +  A     EM +RG  P
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 497

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +  T+  ++ +  ++   ++A E+   M K G +P   T   ++   C  G +++A +L 
Sbjct: 498 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 557

Query: 479 NSM 481
           + +
Sbjct: 558 SEL 560



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 198/398 (49%), Gaps = 19/398 (4%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSENRCKVE--------LDVYSFGIL 181
           Q+L   V  R    N+ L  V++S C  D+      + R  VE         +  ++  L
Sbjct: 170 QVLQEMVSARHVPDNTTLTVVVQSLCLGDR----VDDARELVEEMLHRGMAANAITYSAL 225

Query: 182 IKGCCEAGDLNKAFEVL-NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           + G C+   L++A  +L  ++   GF+P++V Y+++IDG CK G +  A  +F    E+ 
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMS 282

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
              T  TY  LI G  + G   +      KM  +  +P + TY  L+  +C  G++ + +
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +LF +M   +++ +VVT+ +L+ GLC E R+++A  LL+++   G  P + TYN ++DG+
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-EERGITPS 419
           C + +  KA  L    +S G  P+ VTYN+L+    +AG +  A   + ++  E G  P+
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 462

Query: 420 EVT-YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
            V  Y I++D+  R    + A + Y  M + G+ P   T+  ++  LC     ++A +L 
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 522

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
             M +    P     + ++  YC+ G   +A  L  E+
Sbjct: 523 EEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 7/334 (2%)

Query: 238 ELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
           + G  +   T+ V++ GL  +  L+  G    ++++  G+SP     N ++ E C+    
Sbjct: 3   DAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDT 62

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           +    LFD+M     A N  TY  LI  LCK   + EA  LL  MK  G++P  + +N +
Sbjct: 63  TTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVV 121

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G C AG    A  ++ Q+ ++   P  +TY  L+   SKAG  + A  +++EM     
Sbjct: 122 IGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA-S 475
            P   T T+++ S    D ++ A E+   M   G + +  TY  L+ GLC    + EA +
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            L   +      P+ V Y+ +I G CK G    A+ +  EM+     P   +Y+S IG  
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGY 297

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C+ G   EA  LL +M+     P V  Y  L  A
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 20/325 (6%)

Query: 71  LKIISGRITSSSFTPRSL--------LCHLTQLFPS-------SSNPVTKSRLYESIIDA 115
           + ++ G +T   FTP  +        LC   +L  +       S  P   +  Y S+I  
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT--YNSLIGG 296

Query: 116 HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELD 174
           + ++   D+A+    +M+D    P   T+ +L+    K    D  +  F +    K+  D
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 356

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V +F  L+ G C  G +  A E+L ++   G  P +  Y  ++DG CK+  + +A+ L  
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVA 416

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYCN 292
                G V    TY +L+ G  + G      ++ +++   G     S+  Y  ++   C 
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 476

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +G+  +  + ++EM  R       T+ T++  LCK  + Q+A  LL++M   G +P   T
Sbjct: 477 DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGT 536

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLK 377
            + ++  +C AG   KA  L ++L+
Sbjct: 537 CDAVVSAYCRAGMIQKADELASELR 561


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 255/577 (44%), Gaps = 65/577 (11%)

Query: 17  ISRMAKLPPLKAFSLFNWASRQGLQHTPQSISI--ILRLLLSKMSSHSHAAAQTLILKII 74
           +S +A+  P  A SLFN   R G      +I+   I+     ++     A A        
Sbjct: 69  LSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATV------ 122

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
            GR+ ++                   +P+  S L + + D   + R SD       +M +
Sbjct: 123 -GRVITTGL---------------RMSPILFSPLLKGLCD---RRRTSDAMDIVLRRMPE 163

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDL 191
            G +P   ++  LL  +    +  +        ++++ +  LDV ++  +I G    G L
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +KA+ + + + + G SP+VV Y+S+I    K   +++A  +F ++ + G++     YT L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           + G   +G  K+    ++KM  +GV P + TY  L+   C  GK +E  K+FD +  R  
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLD-------------------------------- 339
             +  TY TL+ G   E  + E   LLD                                
Sbjct: 344 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 403

Query: 340 ---QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
               M+  G++P+++ Y  ++D  C AG  D A   FN LKS G +P++V +  LI    
Sbjct: 404 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 463

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
                    +L  EM +RGI    + +  ++ +  +   + +A  ++ LM + G  P+  
Sbjct: 464 TCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTN 523

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           TY  LI G C+ G M EA KL   M    ++P+DV YN +I GY + G     L LL EM
Sbjct: 524 TYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREM 583

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + KG+ P I +Y   +  L Q G+   A+ L  +M+K
Sbjct: 584 DGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 3/308 (0%)

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           F    +      +P++ TY  +I      G++   F     +    +  + + ++ L+ G
Sbjct: 84  FNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKG 143

Query: 325 LCKEMRVQEA-ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQS 382
           LC   R  +A + +L +M   G  P++ +Y  L+ G CD   + +A  L + +  + G+ 
Sbjct: 144 LCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRC 203

Query: 383 P-SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
           P  VV Y  +I    + G    A  L   M +RG +P  VTY+ +I +  ++  M+KA +
Sbjct: 204 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQ 263

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +++ M K+G  PD   Y  L+HG C  G  KEA  +F  M    +EP+ V Y  ++   C
Sbjct: 264 VFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC 323

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K G S  A ++   + ++G  P+  +Y + +     +G   E   LL+ M+K G++    
Sbjct: 324 KNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHH 383

Query: 562 LYNILYRA 569
           ++N++  A
Sbjct: 384 IFNMIMGA 391


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 219/459 (47%), Gaps = 14/459 (3%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------- 173
           +SD+      QM++ G+   +  FN     VIK    DK W    +    +EL       
Sbjct: 341 MSDETYKLCRQMIEQGLLLSTYEFN----LVIKGLLRDKRW---KDAIGLLELVVDTGVP 393

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV+++G LI   C+   L++A  + ++++E G  P++V Y SL+ G C+ G ++ A  L+
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G    + TYT L+ G  K     + +    +M+ NGVS   YTYN LI+     
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +V E  ++             +TYN++I G  K   +  A  +  QM+  GI+PN++TY
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              IDG+C     D A +L   ++ +G  P +  YN  I  F K GN   A   +  + +
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+TP    Y   +  +     M +A + Y  M K     D   Y  LI G    GN+  
Sbjct: 634 DGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAF 693

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A +L++ M    + P+D  +  +  G C+ G+   A RLL +M    + PNI +Y+  I 
Sbjct: 694 ALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLIN 753

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
              +DGK  EA  L ++ML  G+ P  + Y+IL R  N+
Sbjct: 754 ACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRTNNS 792



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 231/492 (46%), Gaps = 46/492 (9%)

Query: 90  CHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           C   +LF   +    K   R+Y   I    K R +D+AL    +M ++G  P   T++S+
Sbjct: 202 CDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSV 261

Query: 148 LIFVIKSCSFD-----KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           +  ++K    D     K  +  +  +   ++DV    +L+ G C  G++ KA ++ +++ 
Sbjct: 262 VDVLVKVGRMDEALRLKDQMLLATGK---KMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
             G +P  V Y  LI GC   G  +    L R++ E GL+ + + + ++I GL ++   K
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           D     E +   GV P ++TY C                                   LI
Sbjct: 379 DAIGLLELVVDTGV-PDVFTYGC-----------------------------------LI 402

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
             LCK  ++ EA  L D+MK AG+ P+++TY+ L+ G+C+ G  D+A +L++++   G  
Sbjct: 403 HWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFP 462

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+ VTY  L++ + K      A  L+ EM + G++  + TY ILI+     + + +  EM
Sbjct: 463 PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEM 522

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
                  GF P   TY  +I+G    G M  A  ++  M +  + PN V Y   I GYC+
Sbjct: 523 LKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCR 582

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                 A++LL  +   G+ P+IA+Y++ I   C+ G    A   L  +LK GL P V++
Sbjct: 583 TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTV 642

Query: 563 YNILYRAKNNIE 574
           YN       N++
Sbjct: 643 YNSFVTGYKNLK 654



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 34/149 (22%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + +Y ++ID   K      AL  + +M+ + V P   TF +                
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTA---------------- 715

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                             L  G C +GD++ A  +L+ +  +  SPN+V Y  LI+ C +
Sbjct: 716 ------------------LTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +G ++ A  L  ++   G+V    TY +L
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 254/561 (45%), Gaps = 69/561 (12%)

Query: 19  RMAKLPPLK---AFSLFNWASRQG---LQHTPQSISIILRLLLSKMSSHSHAAAQTLILK 72
           R+  L P+    A    NW  ++    + H    IS    +L+    +  +  A+T +  
Sbjct: 27  RLGSLRPIHGMLALKFLNWVIKKPNLEINHLTHIISTTTHILVK---ARMYGYAKTTLSH 83

Query: 73  IISGRITSSSFTPRSLLCHLTQLFP-SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
           ++   +  ++     +   L + +P  +SNP     +++ +I   L+  +   A+  F  
Sbjct: 84  MLHMDVGFNN-----VFGALMETYPFCNSNPA----VFDLLIRVCLRENMVGDAVEAFRL 134

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
           M   G  P   T N +L  ++K    D  W FF E                         
Sbjct: 135 MGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKE------------------------- 169

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
                + N++     SPNV  +  L++  C+ G  + A +L RK+ E G   T  TY  L
Sbjct: 170 ----MIANRV-----SPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTL 220

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K G  K   E  + M   G++  + TYN LI + C + + ++G+ +   MR   V
Sbjct: 221 LNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMV 280

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             N +TYNTLI GL KE ++  A ++ ++M +  + PN +TYN LI G C  G  ++A R
Sbjct: 281 YPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALR 340

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L + + S+G  P+ VTY  L+   SK     + S ++  M   G+    ++YT +ID   
Sbjct: 341 LCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLC 400

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++  +E+A ++   M K   SPD+ T+ VL++G                  +T L PN V
Sbjct: 401 KNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGF----------------LKTGLVPNRV 444

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +++ +I+ YCK GN   AL     MN+ G V +  + S  +   C+ G+  EAE  ++ M
Sbjct: 445 LHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHM 504

Query: 552 LKLGLKPSVSLYNILYRAKNN 572
            ++GL PS   ++ +     N
Sbjct: 505 SRMGLAPSSVTFDCIIDTYGN 525



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 228/460 (49%), Gaps = 2/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           ++ IID +  S  + +A   F +M   G  P   T+  LL  ++     ++  +F    +
Sbjct: 516 FDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPS 575

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                +    +  ++     +G+L+ A  +L+++    F P+   YTSLI G C+ G + 
Sbjct: 576 SIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMV 635

Query: 228 RAKMLFRKIGELGLVATQHT-YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A +L  +  E GL++     YT L+ GL K G  K     +E M   GV P    +N L
Sbjct: 636 PALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVL 695

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  Y  +GK+S+   +   MR R +  N+ TYN L+ G  K   +    +L ++M + G 
Sbjct: 696 LDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGF 755

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+ +T++ LI G+C +G  D A +   ++   G      T NVL+    +    KMA D
Sbjct: 756 APDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFD 815

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           LV+++   G+TP+  TY  L + FVR+   ++A  +   + ++G++P    +  LI G+C
Sbjct: 816 LVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMC 875

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             GN+K A +L + M    +    V  + +I G  +   +  A R+LG M E  ++P +A
Sbjct: 876 RMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVA 935

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++++ +   C++G   +A  L + M +  +K  V+ YN+L
Sbjct: 936 TFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVL 975



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/570 (23%), Positives = 237/570 (41%), Gaps = 93/570 (16%)

Query: 93  TQLFPSSS--NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIF 150
           T++F   S  N +  S  Y ++I  H  +   ++AL     M+  G+RP   T+ +LL  
Sbjct: 304 TKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNG 363

Query: 151 VIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
           + K   F          R   V +   S+  +I G C+ G L +A ++L+ + ++  SP+
Sbjct: 364 ISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPD 423

Query: 210 VVIYTSLIDGC-------------------CKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +V ++ L++G                    CK G+++ A   +  + + G V+   T +V
Sbjct: 424 IVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSV 483

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR--- 307
           L+    + G  ++   F + M   G++PS  T++C+I  Y N G   + F +FD+M    
Sbjct: 484 LVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLG 543

Query: 308 ----------------------------HRE----VACNVVTYNTLICGLCKEMRVQEAE 335
                                       HR      A     YNT++    +   +  A 
Sbjct: 544 HLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAV 603

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIRA 394
            LLD+M M    P+  TY  LI G C  G+   A  L  +    G  SP+   Y  L+  
Sbjct: 604 ALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDG 663

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             K G+SK A  +  +M   G+ P  + + +L+D + R   M K  ++ S M+      +
Sbjct: 664 LLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFN 723

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR--- 511
           + TY +L+HG   +  M   SKL+N M      P+ + ++ +I GYCK G+   A++   
Sbjct: 724 LATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLR 783

Query: 512 --------------------------------LLGEMNEKGLVPNIASYSSTIGVLCQDG 539
                                           L+ ++N  G+ PN+ +Y+S      +  
Sbjct: 784 KITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTC 843

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + EA  +L+ +L+ G  P+   +  L R 
Sbjct: 844 SFDEARCILHALLENGYAPTCKQFTTLIRG 873



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 216/479 (45%), Gaps = 21/479 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +ID   +   S +      +M  + V P   T+N+L+  ++K          F E +
Sbjct: 252 YNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMS 311

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C +  +  ++  LI G C  G++ +A  + + +   G  PN V Y +L++G  K+    
Sbjct: 312 LCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFG 371

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL- 286
               +  ++   G+     +YT +I GL KNGL ++  +  + M    VSP + T++ L 
Sbjct: 372 LVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV 431

Query: 287 ------------------IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
                             I+ YC  G + E    +  M       +  T + L+   C+ 
Sbjct: 432 NGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRC 491

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            R++EAE  +D M   G++P+ +T++ +ID + ++G+  KAF +F+++ S G  PS  TY
Sbjct: 492 GRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTY 551

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             L++     G+   A   +              Y  ++    RS ++  A  +   M  
Sbjct: 552 EGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVM 611

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEPNDVVYNMMIFGYCKEGNSY 507
           + F PD +TY  LI GLC KG M  A  L     E   L PN  +Y  ++ G  KEG+S 
Sbjct: 612 NNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSK 671

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AL +  +M  +G+ P+  +++  +    + GK  +   +L+ M    L  +++ YNIL
Sbjct: 672 AALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNIL 730



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 205/468 (43%), Gaps = 56/468 (11%)

Query: 54   LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSL---LCHLTQLFPS------------ 98
            L S+  + S+A A  L+ +++       SFT  SL   LC   ++ P+            
Sbjct: 592  LTSRSGNLSNAVA--LLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGL 649

Query: 99   -SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
             S NP     +Y S++D  LK   S  AL+ F  ML+ GV+P +  FN LL         
Sbjct: 650  LSPNPA----MYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLL--------- 696

Query: 158  DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                            D YS           G ++K  ++L+ +       N+  Y  L+
Sbjct: 697  ----------------DRYS---------RKGKMSKVNDILSTMRSRSLCFNLATYNILL 731

Query: 218  DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
             G  K   + R   L+ ++   G    + T+  LI G  K+G      +F  K+ + G  
Sbjct: 732  HGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFK 791

Query: 278  PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
               +T N L+ + C   ++   F L  ++    V  NV TYN+L  G  +     EA  +
Sbjct: 792  VDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCI 851

Query: 338  LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            L  +   G +P    +  LI G C  G    A  L +++K  G S   V  + +IR  ++
Sbjct: 852  LHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLAR 911

Query: 398  AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            +  +  A+ ++  M E  I P+  T+T L+ ++ +  ++ KA E+ S+M++     DV  
Sbjct: 912  SRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAA 971

Query: 458  YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
            Y VLI GLC  G+++ A KL+  M +  + PN  +Y ++I  +   GN
Sbjct: 972  YNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGN 1019



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 2/288 (0%)

Query: 129  FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
            +++M+  G  P   T++SL++   KS S D    F  +   +  ++D ++  +L+   CE
Sbjct: 747  YNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCE 806

Query: 188  AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              ++  AF+++ QL  +G +PNV  Y SL +G  +    + A+ +   + E G   T   
Sbjct: 807  RNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQ 866

Query: 248  YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
            +T LI G+ + G  K   E  ++M++ GVS      + +I       K  E  ++   M 
Sbjct: 867  FTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIML 926

Query: 308  HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              ++   V T+ TL+   CKE  V +A  L   M+   +  +V  YN LI G C  G+  
Sbjct: 927  EMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQ 986

Query: 368  KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD-LVREMEER 414
             AF+L+ +++     P+   Y VLI +F   GN  + S+ L+R++  R
Sbjct: 987  AAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTR 1034


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 226/474 (47%), Gaps = 22/474 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----- 157
           V  S +Y+++I A  +     +AL    +M   G  P   TFN ++  + K         
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATK 309

Query: 158 --DKGWL--FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
             D+  L  F+ +N         ++G L+ G C  G LN+A ++L ++      PN  I 
Sbjct: 310 LVDRMLLRGFYPDN--------MTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAIL 357

Query: 214 TSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ 272
            +LI+G   +G ++ A+  L   +   G      TY +L+ GL K G      +   +M 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 273 LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQ 332
             G  P++ TY  L++  C  G + E   +  EM  R +  N V YN LIC LC++ +V 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 333 EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
            A  LL +M   G  P++ TYN LI G C     D+AFRLF+ +  +G   + VTYN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
            A  + G  + A  LV +M  RG T  ++TY  LI +F +  ++EK  E+Y  M   G  
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            D  +  ++I+GLC  G +  A +           P+ V YN ++ G CK G    AL L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              +  +G+ P+  +Y++ I   C++G   +A     + ++ G  PS   +N+L
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 2/380 (0%)

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV--ELDVYSFGILIKGCCEAGDLNKAFE 196
           P +   N+L+   + S    +   F +E       + D++++ IL+ G C+ G L+ A +
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           ++N++   G  PNV+ Y  L++G CK G +E A ++  ++   GL      Y  LIC L 
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           +            +M   G  P L+TYN LI+  C   ++ E F+LF  M       N V
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYNTLI  L +    Q+A  L++ M   G + + ITYN LI  FC  G  +K   L+ Q+
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             +G     ++ N++I    K G    A + +R+   RG  P  VTY  +++   +   +
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++A  ++  +Q  G  PD +TY   I   C +G + +A   F    E    P+++ +N++
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711

Query: 497 IFGYCKEGNSYRALRLLGEM 516
           ++   K+ N      +L E+
Sbjct: 712 VYTLLKQSNQENNFFVLDEL 731



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 203/422 (48%), Gaps = 7/422 (1%)

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           L I V  +C      +F+      V   V++FGI++K  C   +++ A  +L  + + G 
Sbjct: 190 LEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGC 249

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            PN ++Y +LI    +   +  A  L  ++  +G +    T+  +I GL K     D  +
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATK 309

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-NVVTYNTLICGL 325
             ++M L G  P   TY  L+H  C  GK++E  K+       ++ C N    NTLI G 
Sbjct: 310 LVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL-----IKIPCPNNAILNTLINGY 364

Query: 326 CKEMRVQEAERLLDQ-MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
               +++EA+  L++ M   G  P++ TYN L+ G C  G    A  L N++   G  P+
Sbjct: 365 VMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPN 424

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V+TY +L+    KAG  + A  ++ EM  RG+T + V Y  LI +  R + +  A  + S
Sbjct: 425 VITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLS 484

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G  PD++TY  LI+GLC    + EA +LF++M       N+V YN +I    + G
Sbjct: 485 EMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRG 544

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              +AL L+ +M  +G   +  +Y+  I   C+ G   +   L  QM+  GL       N
Sbjct: 545 AFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604

Query: 565 IL 566
           I+
Sbjct: 605 IM 606



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 185/391 (47%), Gaps = 9/391 (2%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL+ G C     N  +++L++    G SP V  +  ++   C   +++ A  L R + + 
Sbjct: 192 ILVTGNCPQVATNVFYDMLSK----GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V     Y  LI  L +     +  +  E+M + G  P + T+N +IH  C   K+ + 
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            KL D M  R    + +TY  L+ GLC+  ++ EA ++L ++      PN    N LI+G
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLING 363

Query: 360 FCDAGETDKAFRLFNQLKSN-GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           +  +G+  +A    N+   N G  P + TYN+L+    K G+   A DLV EM  RG  P
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           + +TY IL++   ++  +E+A  +   M   G + +   Y  LI  LC K  +  A  L 
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           + M     +P+   YN +I+G CK      A RL   M   G V N  +Y++ I  L + 
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G + +A  L+N ML  G       YN L +A
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 177/383 (46%), Gaps = 2/383 (0%)

Query: 102 PVTKSRLYESIIDAHLKS-RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           P   + +  ++I+ ++ S +L +   F    M++ G +P   T+N L+  + K  S    
Sbjct: 350 PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 161 WLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
               +E +R   E +V ++ IL+ G C+AG L +A  VL+++   G + N VIY  LI  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            C+   +  A  L  ++   G      TY  LI GL K     + F  +  M L+G   +
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
             TYN LIH     G   +   L ++M  R    + +TYN LI   CK   +++   L +
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           QM M G+  + I+ N +I+G C  G+ D AF       + G  P +VTYN ++    K G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             K A +L   ++  G+ P   TY   I    +   +  A   +    ++GF P   T+ 
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709

Query: 460 VLIHGLCMKGNMKEASKLFNSMW 482
           VL++ L  + N +    + + +W
Sbjct: 710 VLVYTLLKQSNQENNFFVLDELW 732



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           Q    LLD   +    P   +Y+ +++          A  +F  + S G SP+V T+ ++
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           ++A         A  L+R+M + G  P+ + Y  LI +  + + + +A ++   M   G 
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            PDV T+  +IHGLC    + +A+KL + M      P+++ Y  ++ G C+ G    A +
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ-MLKLGLKPSVSLYNIL 566
           +L ++      PN A  ++ I      G+  EA+  LN+ M+  G +P +  YNIL
Sbjct: 345 ILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNIL 396



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           + G+      Y V I+ L   G  K   KL   M E  +   + ++ +++  Y K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 508 RALRLLGEMNEKGLV-PNIASYSSTIGVLCQDGKWPE-AEVLLNQMLKLGLKPSVSLYNI 565
           +A+RLL +M    L  P   SY   + +L   G  P+ A  +   ML  G+ P+V  + I
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVT-GNCPQVATNVFYDMLSKGVSPTVFTFGI 223

Query: 566 LYRA 569
           + +A
Sbjct: 224 VMKA 227


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 219/449 (48%), Gaps = 7/449 (1%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFG 179
           LSD AL +F   +     P  ++FN LL        F+       E + + +  +  + G
Sbjct: 112 LSD-ALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHG 167

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +++   C   DL+KA    N +      P +  YT L+DG CK   +ERA  +F ++   
Sbjct: 168 VILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRK 227

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G       Y+ LI GL K G   +  +  + M   G  P+   Y  ++   C  G++ E 
Sbjct: 228 GYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEA 287

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            K   EMR R +   V TY+ ++ G     +V++A  ++++M     +P+ I+Y   I+ 
Sbjct: 288 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEA 347

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
               G  ++A ++F  +   G  P + TY ++I  F K G+   A+ ++R M++  + P+
Sbjct: 348 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPN 407

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              YT+++D FV+S  +E+A E+Y  + K G  P   TY  +I+ LC    M EA +L  
Sbjct: 408 RYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLR 467

Query: 480 SMWETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            M   K  LEP+ V Y+M+I G  K G   RA  LL EM + G++P+  +Y+S I  L  
Sbjct: 468 EMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAG 527

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            GK   A  LL +MLK G+ P    Y  L
Sbjct: 528 AGKVSRAMELLEEMLKAGIFPDDHTYGTL 556



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 215/439 (48%), Gaps = 14/439 (3%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGC 185
             +M   G+     T   +L  +      DK   +F   S N+C  E  ++++ +L+ G 
Sbjct: 151 LREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKC--EPTLFTYTVLVDGL 208

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+A  + +A +V  ++   G+ P+++ Y+SLIDG  K G ++ A+ L   +   G   T 
Sbjct: 209 CKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTA 268

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             YT ++ GL K G  ++  +  ++M+   + P + TY+ ++  Y   GKV + F + +E
Sbjct: 269 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R+ A + ++Y   I  L    R +EAE++ + M   G  P++ TY  +ID FC  G 
Sbjct: 329 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 388

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A  +   +      P+   Y +++  F K+   + A +L + + + GI PS VTY  
Sbjct: 389 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT 448

Query: 426 LIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           +I++  +   M++A E+   MQ  K    P + TY ++IHGL   G  + A  L   M +
Sbjct: 449 VINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMID 508

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ---DGK 540
             + P+   Y  +I      G   RA+ LL EM + G+ P+  +Y + + +LC+   D  
Sbjct: 509 NGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAA 568

Query: 541 WPEAEVLLNQMLKLGLKPS 559
           W     LL +M++ G  P+
Sbjct: 569 WD----LLQEMMRNGHTPN 583



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 234/517 (45%), Gaps = 45/517 (8%)

Query: 28  AFSLFNWA-SRQGLQHTPQSI-SIILRLLLSKMSSHSHAAAQTLILK--IISGRITSSSF 83
           A   ++WA +R G  HT  +  S++L L+     S +    Q+ I +  + S  I    F
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGF 138

Query: 84  TPRSLLCHLTQLFPS-SSNPVTKSRLYESIIDAHLKSRLS-DQALFYFHQMLDSGVRPRS 141
             R     +  L     S  +T +     +I + L +R   D+A+ YF+ +  +   P  
Sbjct: 139 AARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTL 198

Query: 142 NTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
            T+  L+  + K+   ++    F E  R   + D+ ++  LI G  +AG +++A ++++ 
Sbjct: 199 FTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDL 258

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-----------------GELGLVA 243
           +   G  P  V YTS++ G CK G I+ A    +++                 G +G+  
Sbjct: 259 MVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 318

Query: 244 TQH------------------TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +                   +YT+ I  L+  G +++  + +E M   G  P ++TY  
Sbjct: 319 VEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 378

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I  +C EG ++    +   M    V  N   Y  ++ G  K  R++EA  L  ++   G
Sbjct: 379 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 438

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKM 403
           I P+ +TYN +I+  C   + D+A  L  +++   +   PS+VTY+++I    K G  + 
Sbjct: 439 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 498

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL+ EM + G+ P   TYT LI +   +  + +A E+   M K+G  PD +TYG L+ 
Sbjct: 499 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ 558

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            LC + ++  A  L   M      PN+  +  +  G+
Sbjct: 559 ILC-RSDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 184/404 (45%), Gaps = 50/404 (12%)

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKD 263
           GFS  +    SL+    + G +  A   F+  I E  +     ++ +L+ G       +D
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNV----SSFNILLRGF----AARD 142

Query: 264 GFE----FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
            FE       +M+  G++ +  T+  ++   C    + +    F+ +   +    + TY 
Sbjct: 143 DFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYT 202

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            L+ GLCK  +V+ A  + ++M   G  P++I Y+ LIDG   AG  D+A +L + + + 
Sbjct: 203 VLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVAR 262

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVR------------------------------ 409
           G  P+ V Y  ++    K G  + A   ++                              
Sbjct: 263 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKA 322

Query: 410 -----EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
                EM +R   P  ++YT+ I++       E+A +++  M + G  PD++TYG++I  
Sbjct: 323 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 382

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C +G+M  A+ +   M +  ++PN  +Y M++ G+ K      AL L   + + G++P+
Sbjct: 383 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 442

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQM--LKLGLKPSVSLYNIL 566
             +Y++ I  LC+  K  EA  LL +M   K  L+PS+  Y+++
Sbjct: 443 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMI 486


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 220/450 (48%), Gaps = 40/450 (8%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC---KVELDVYSFG 179
           + ALF F+ M+     P    F+ LL  +++   +  G +     R    ++E DV+ F 
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHY--GTVLSLSKRIELLRIERDVFHFN 123

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ILI        ++ AF VL ++ ++GF P+ V ++SLI+G C      RA          
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARA---------- 173

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
                                     EF+++M  +G  P+L+TYN +I  +C  GK +  
Sbjct: 174 -------------------------MEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA 208

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L  +M       ++V YNT+I GLCK+  V EA  +  ++K  G+ P+V TY+ L+ G
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHG 268

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C++ + ++A  LFN++ S    P VVT+N+L+    K G    A  +++ M E+G+ P+
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TY  L++ +   + + +A  ++  M   G  P+V +Y +LI+G C    + EA +LF+
Sbjct: 329 YATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFD 388

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M    L PN   YN +I G C+ G    A  L  +M  +G  P++ + +  +  LC+ G
Sbjct: 389 EMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLG 448

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               A  L   M    LKP++  Y+IL RA
Sbjct: 449 YLDNALRLFRAMQDSCLKPNLVTYDILIRA 478



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 180/337 (53%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E D  +F  LI G C      +A E  +++   G+ PN+  Y ++I G CK G    A  
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVG 210

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L +K+ + G       Y  +I GL K+ L  +  + + +++  GV P ++TY+ L+H  C
Sbjct: 211 LLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N  +  E   LF+EM    +  +VVT+N L+  LCKE  + EA+ ++  M   G+ PN  
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           TYN L++G+C   +  +A  +F+ + + G  P+VV+YN+LI  + KA     A +L  EM
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             RG+ P+   Y  LI    ++    +A E++  MQ  G SPD+ T  +L+  LC  G +
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
             A +LF +M ++ L+PN V Y+++I    K G  YR
Sbjct: 451 DNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 189/356 (53%), Gaps = 3/356 (0%)

Query: 119 SRLS--DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDV 175
           SRL   D A     +++  G  P + TF+SL+  +     F +   FF E      + ++
Sbjct: 130 SRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNL 189

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +++  +IKG C+ G    A  +L ++++ G  P++VIY ++IDG CK+  +  A  +F +
Sbjct: 190 HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSE 249

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           I   G+     TY++L+ GL  +  +++    + +M    + P + T+N L+ + C EG 
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +SE   +   M  + V  N  TYN+L+ G C + +V EA  + D M   G  PNV++YN 
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LI+G+C A   D+A  LF+++   G  P+   YN LI    +AG    A +L ++M+ +G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            +P  VT TIL+DS  +   ++ A  ++  MQ S   P++ TY +LI  +   G +
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 40/295 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +IID   K RL  +AL  F ++   GVRP                            
Sbjct: 226 IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP---------------------------- 257

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV+++ IL+ G C +    +A  + N++  +   P+VV +  L+D  CK G + 
Sbjct: 258 ------DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE---FYEKMQLNGVSPSLYTYN 284
            A+ + + + E G+     TY  L+ G     LQ   FE    ++ M   G  P++ +YN
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGY---CLQNKVFEARMVFDAMITKGCMPNVVSYN 368

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ YC   ++ E  +LFDEM  R +  N   YNTLI GLC+  R  EA  L   M+  
Sbjct: 369 ILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQ 428

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           G SP+++T   L+D  C  G  D A RLF  ++ +   P++VTY++LIRA  K+G
Sbjct: 429 GCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 35/311 (11%)

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+   + +    F+ M H+     +V ++ L+  L +         L  ++++  I  +V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
             +N LI+ F      D AF +  ++   G  P  VT++ LI           A +   E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP----------------- 453
           M   G  P+  TY  +I  F +      A  +   M K+G  P                 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 454 ------------------DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                             DV+TY +L+HGLC     +EAS LFN M    + P+ V +N+
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++   CKEG    A  ++  M EKG+ PN A+Y+S +   C   K  EA ++ + M+  G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 556 LKPSVSLYNIL 566
             P+V  YNIL
Sbjct: 360 CMPNVVSYNIL 370


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 240/504 (47%), Gaps = 36/504 (7%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P    R +  +I  + K      A   F  M   G+ P +  F SL+     +       
Sbjct: 265 PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVL 324

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               E + + +EL + ++ I+I G  +  D   A  +  + +      N +IY+++I   
Sbjct: 325 SCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAH 384

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G+++RA+ L R++ E G+ A    Y  ++ G      +K     +E+++    +PS+
Sbjct: 385 CQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSI 444

Query: 281 YTYNCLIHEYCNEGKVSEG-----------------------------------FKLFDE 305
            +Y CLI+ Y   GKV++                                    F +F+E
Sbjct: 445 ISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEE 504

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M    +  +   YN LI   CK   +  A R+L++M+   + P+   +  +I+GF  AG+
Sbjct: 505 MLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD 564

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             +A  + + ++ +G +P+V+TYN LI    K    + A  ++ +M   GITP+E TYTI
Sbjct: 565 MKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTI 624

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++  +  + D+ KAFE ++ +++ G   DVY Y  L+   C  G M+ A  +   M   K
Sbjct: 625 IMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQK 684

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +  N  VYN++I G+ + G+ + A  L+ +M E G+ PNI +Y+S I   C+ G    A+
Sbjct: 685 IARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQ 744

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            ++ +M  +GLKP++  Y  L + 
Sbjct: 745 KVIEEMADVGLKPNLKTYTTLIKG 768



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 206/433 (47%), Gaps = 9/433 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-----IFVIKSCSFDKGWL 162
           +Y +II AH +S   D+A     +M + G+    + ++S++     I   K C      +
Sbjct: 376 IYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLI----V 431

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F     C     + S+G LI    + G + KA  +  ++E  G   N   Y+ LI G   
Sbjct: 432 FERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIH 491

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
             D   A  +F ++ + GL   +  Y +LI    K G         EKMQ   + PS   
Sbjct: 492 LHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRA 551

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           +  +I  +   G +     + D MR    A  V+TYN LI GL K+ +V+ A  +L++M 
Sbjct: 552 FRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMS 611

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           +AGI+PN  TY  ++ G+   G+  KAF  F ++K  G    V  Y  L+RA  K+G  +
Sbjct: 612 IAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQ 671

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I
Sbjct: 672 SALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYI 731

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           +  C  G+M+ A K+   M +  L+PN   Y  +I G+ K     RAL+   EM   GL 
Sbjct: 732 NACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLK 791

Query: 523 PNIASYSSTIGVL 535
           P+ A+Y   +  L
Sbjct: 792 PDEAAYHCLVTSL 804



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 159/315 (50%), Gaps = 2/315 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIK 183
           A   F +ML SG++P    +N L+    K  + D+      +  + +++    +F  +I+
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 557

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G   AGD+ +A  +L+ +   G +P V+ Y +LI G  K   +ERA  +  K+   G+  
Sbjct: 558 GFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITP 617

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
            +HTYT+++ G   NG     FE++ K++  G+   +Y Y  L+   C  G++     + 
Sbjct: 618 NEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVT 677

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM  +++A N   YN LI G  +   V EA  L+ QMK  G+ PN+ TY   I+  C A
Sbjct: 678 REMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKA 737

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+  +A ++  ++   G  P++ TY  LI+ ++KA     A     EM+  G+ P E  Y
Sbjct: 738 GDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAY 797

Query: 424 TILIDSFV-RSDDME 437
             L+ S + R+  ME
Sbjct: 798 HCLVTSLLSRATVME 812



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 182/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +A+    +M   G++  + T++ L+   I    F   +  F E  
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEML 506

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 507 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 566

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +   +   G   T  TY  LI GL K    +       KM + G++P+ +TY  ++
Sbjct: 567 RALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIM 626

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I+
Sbjct: 627 RGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIA 686

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 687 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKV 746

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + ++   ++A + +  M+ +G  PD   Y  L+  L  
Sbjct: 747 IEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLS 806

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 807 RATVMEGS 814



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 3/334 (0%)

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           ++  + ++I    K G +      +E M+  G+ P+ + +  L+H Y     +       
Sbjct: 268 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCV 327

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +EM+   +   +VTY+ +I G  K    Q A+ L  + K      N I Y+ +I   C +
Sbjct: 328 EEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQS 387

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G  D+A  L  +++ +G    +  Y+ ++  ++   + K    +   ++E   TPS ++Y
Sbjct: 388 GNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISY 447

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LI+ +++   + KA  +   M+  G   +  TY +LI G     +   A  +F  M +
Sbjct: 448 GCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLK 507

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
           + L+P+  +YN++I  +CK GN  RA+R+L +M ++ + P+  ++   I      G    
Sbjct: 508 SGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR 567

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA---KNNIE 574
           A  +L+ M + G  P+V  YN L      KN +E
Sbjct: 568 ALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVE 601



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + ++I  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 262 ERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 321

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
                   M    +E   V Y+++I G+ K  ++  A  L  E   K    N   YS+ I
Sbjct: 322 GVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNII 381

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+ +M + G+   +  Y+
Sbjct: 382 HAHCQSGNMDRAEELVREMEEDGIDAPIDAYH 413


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 236/502 (47%), Gaps = 41/502 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  I+    K R  ++AL  F +M    V P   T+N L+  + +    +       +  
Sbjct: 373 YNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDME 431

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  +V +  I+I   C+A  L +A  +   +++   +PN V ++SLIDG  K G ++
Sbjct: 432 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 491

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY------ 281
            A  L+ K+ + G V     YT LI   FK G ++DG + Y++M   G SP L       
Sbjct: 492 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551

Query: 282 -----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                                        +Y+ LIH     G  +E ++LF  M+ +   
Sbjct: 552 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 611

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +   YN +I G CK  +V +A +LL++MK+ G  P V+TY  +IDG       D+A+ L
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F + KSNG   +VV Y+ LI  F K G    A  ++ E+ ++G+TP+  T+  L+D+ V+
Sbjct: 672 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 731

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           ++++ +A   +  M+     P+  TY +LI+GLC      +A   +  M +  L+PN + 
Sbjct: 732 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 791

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  MI G  K GN   A  L       G +P+ ASY++ I  L    K  +A  L  +  
Sbjct: 792 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851

Query: 553 KLG----LKPSVSLYNILYRAK 570
             G     K  V L + L++A+
Sbjct: 852 LKGCNIHTKTCVVLLDALHKAE 873



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 6/465 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY   ID   K+   D +  +FH+M   G+ P   T+ S++  + K+   D+    F + 
Sbjct: 267 LYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQL 326

Query: 167 --NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             NR KV    Y++  +I G   AG  ++A+ +L + +  G  P+V+ Y  ++    K  
Sbjct: 327 EQNR-KVPC-AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +E A  +F ++ +   V    TY +LI  L + G      E  + M+  G+ P++ T N
Sbjct: 385 RVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I   C   K+ E   +F+ M  +    N VT+++LI GL K  RV +A  L ++M   
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 503

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G  P  I Y  LI  F   G  +   +++ ++   G SP +   N  +    KAG ++  
Sbjct: 504 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 563

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L RE+   G  P   +Y+ILI   V++    + +E++  M++ G   D + Y  +I G
Sbjct: 564 RALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDG 623

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G + +A +L   M      P  V Y  +I G  K      A  L  E    G+  N
Sbjct: 624 FCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLN 683

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  YSS I    + G+  EA +++ ++++ GL P+V  +N L  A
Sbjct: 684 VVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 206/458 (44%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  +  +   D+A     +    G  P    +N +L  + K    ++    F E +
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                +V ++ ILI   C  G LN A E+ + +E  G  PNV+    +ID  CK   +E 
Sbjct: 398 RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 457

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F  + +        T++ LI GL K G   D +  YEKM   G  P    Y  LI 
Sbjct: 458 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 517

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G+  +G K++ EM H   + ++   NT +  + K    ++   L  ++   G  P
Sbjct: 518 SFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP 577

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +  +Y+ LI G   AG  ++ + LF  +K  G       YN +I  F K+G    A  L+
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM+ +G  P+ VTY  +ID   + D +++A+ ++   + +G   +V  Y  LI G    
Sbjct: 638 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 697

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +   + +  L PN   +N ++    K      AL     M +    PN  +Y
Sbjct: 698 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 757

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S  I  LC+  K+ +A V   +M KLGLKP+   Y  +
Sbjct: 758 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 795



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 201/429 (46%), Gaps = 14/429 (3%)

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI-------LIKGCCEAGDLNKAF 195
            +NSLL+ + ++  FD         R   E+ +  FG        L+  C ++  L +AF
Sbjct: 127 AYNSLLMVMARNTEFDH------LERILEEMSLSGFGPSSNISIELVANCVKSRKLREAF 180

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           +++  + +  F P    YT LI    +  + +   +LF ++ ELG     H +T LI   
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            + G         ++M+ N +   +  YN  I  +   GKV   +K F EM+   +  + 
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTY ++I  LCK  R+ EA  L +Q++     P    YN +I G+  AG+ D+A+ L  +
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
            K+ G  PSV+ YN ++    K    + A  +  EM +R   P+  TY ILID   R   
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGK 419

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  A E+   M+++G  P+V T  ++I  LC    ++EA  +F  M +    PN V ++ 
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G  K G    A  L  +M + G VP    Y+S I    + G+  +   +  +M+  G
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539

Query: 556 LKPSVSLYN 564
             P ++L N
Sbjct: 540 CSPDLTLIN 548



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 181/346 (52%), Gaps = 1/346 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           L  + +D   K+  +++    F ++   G  P + +++ L+  ++K+   ++ + LF++ 
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 LD +++  +I G C++G +NKA+++L +++  G  P VV Y S+IDG  K   +
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 665

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E++   G++P++YT+NCL
Sbjct: 666 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       +++E    F  M+  +   N +TY+ LI GLC+  +  +A     +M+  G+
Sbjct: 726 LDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGL 785

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN ITY  +I G   AG   +A  LF++ K+NG  P   +YN +I   S A  +  A  
Sbjct: 786 KPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 845

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           L  E   +G      T  +L+D+  +++ +E+A  + ++++++  S
Sbjct: 846 LFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKS 891



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 36/285 (12%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISP----------------------NVI--- 351
            YN+L+  + +       ER+L++M ++G  P                      ++I   
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 352 ----------TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                      Y  LI    +  E D    LF+Q++  G   +V  +  LIR F++ G  
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L+ EM+   +    V Y + ID F ++  ++ +++ +  M+  G  PD  TY  +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  LC    + EA +LF  + + +  P    YN MI GY   G    A  LL     KG 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +P++ +Y+  +  L +  +  EA  +  +M K    P+V  YNIL
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNIL 410


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 236/502 (47%), Gaps = 41/502 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  I+    K R  ++AL  F +M    V P   T+N L+  + +    +       +  
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDME 186

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  +V +  I+I   C+A  L +A  +   +++   +PN V ++SLIDG  K G ++
Sbjct: 187 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 246

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY------ 281
            A  L+ K+ + G V     YT LI   FK G ++DG + Y++M   G SP L       
Sbjct: 247 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 306

Query: 282 -----------------------------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                                        +Y+ LIH     G  +E ++LF  M+ +   
Sbjct: 307 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 366

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +   YN +I G CK  +V +A +LL++MK+ G  P V+TY  +IDG       D+A+ L
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 426

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F + KSNG   +VV Y+ LI  F K G    A  ++ E+ ++G+TP+  T+  L+D+ V+
Sbjct: 427 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 486

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           ++++ +A   +  M+     P+  TY +LI+GLC      +A   +  M +  L+PN + 
Sbjct: 487 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 546

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  MI G  K GN   A  L       G +P+ ASY++ I  L    K  +A  L  +  
Sbjct: 547 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 606

Query: 553 KLG----LKPSVSLYNILYRAK 570
             G     K  V L + L++A+
Sbjct: 607 LKGCNIHTKTCVVLLDALHKAE 628



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 206/458 (44%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++I  +  +   D+A     +    G  P    +N +L  + K    ++    F E +
Sbjct: 93  YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 152

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                +V ++ ILI   C  G LN A E+ + +E  G  PNV+    +ID  CK   +E 
Sbjct: 153 RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 212

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +F  + +        T++ LI GL K G   D +  YEKM   G  P    Y  LI 
Sbjct: 213 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 272

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +   G+  +G K++ EM H   + ++   NT +  + K    ++   L  ++   G  P
Sbjct: 273 SFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP 332

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +  +Y+ LI G   AG  ++ + LF  +K  G       YN +I  F K+G    A  L+
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM+ +G  P+ VTY  +ID   + D +++A+ ++   + +G   +V  Y  LI G    
Sbjct: 393 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 452

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +   + +  L PN   +N ++    K      AL     M +    PN  +Y
Sbjct: 453 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 512

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           S  I  LC+  K+ +A V   +M KLGLKP+   Y  +
Sbjct: 513 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 550



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 1/395 (0%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
            Y++  +I G   AG  ++A+ +L + +  G  P+V+ Y  ++    K   +E A  +F 
Sbjct: 90  AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 149

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ +   V    TY +LI  L + G      E  + M+  G+ P++ T N +I   C   
Sbjct: 150 EM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 208

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+ E   +F+ M  +    N VT+++LI GL K  RV +A  L ++M   G  P  I Y 
Sbjct: 209 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 268

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI  F   G  +   +++ ++   G SP +   N  +    KAG ++    L RE+   
Sbjct: 269 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAH 328

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P   +Y+ILI   V++    + +E++  M++ G   D + Y  +I G C  G + +A
Sbjct: 329 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 388

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +L   M      P  V Y  +I G  K      A  L  E    G+  N+  YSS I  
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             + G+  EA +++ ++++ GL P+V  +N L  A
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 181/346 (52%), Gaps = 1/346 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
           L  + +D   K+  +++    F ++   G  P + +++ L+  ++K+   ++ + LF++ 
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 LD +++  +I G C++G +NKA+++L +++  G  P VV Y S+IDG  K   +
Sbjct: 361 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 420

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A MLF +    G+      Y+ LI G  K G   + +   E++   G++P++YT+NCL
Sbjct: 421 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 480

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +       +++E    F  M+  +   N +TY+ LI GLC+  +  +A     +M+  G+
Sbjct: 481 LDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGL 540

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN ITY  +I G   AG   +A  LF++ K+NG  P   +YN +I   S A  +  A  
Sbjct: 541 KPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 600

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           L  E   +G      T  +L+D+  +++ +E+A  + ++++++  S
Sbjct: 601 LFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKS 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 26/384 (6%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+  C ++  L +AF+++  + +  F P    YT LI                   G++G
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI-------------------GKVG 56

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           L+     +  ++C   K     +  E +E+++ N   P  Y YN +I  Y + GK  E +
Sbjct: 57  LMLL---FPWVLC---KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY 110

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
            L +  + +    +V+ YN ++  L K+ RV+EA R+ ++MK   + PNV TYN LID  
Sbjct: 111 GLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDML 169

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+ + A  + + ++  G  P+V+T N++I    KA   + A  +   M+++  TP+ 
Sbjct: 170 CREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNA 229

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VT++ LID   +   ++ A+ +Y  M   G  P    Y  LI      G  ++  K++  
Sbjct: 230 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M  T   P+  + N  +    K G + +   L  E+N  G +P+  SYS  I  L + G 
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 349

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYN 564
             E   L   M + G       YN
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYN 373



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 11/304 (3%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG------ 324
           M L+G  PS      L+       K+ E F +   MR  +       Y  LI        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 325 ----LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
               LCK  R+ EA  L +Q++     P    YN +I G+  AG+ D+A+ L  + K+ G
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             PSV+ YN ++    K    + A  +  EM +R   P+  TY ILID   R   +  A 
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAAL 179

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
           E+   M+++G  P+V T  ++I  LC    ++EA  +F  M +    PN V ++ +I G 
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            K G    A  L  +M + G VP    Y+S I    + G+  +   +  +M+  G  P +
Sbjct: 240 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 299

Query: 561 SLYN 564
           +L N
Sbjct: 300 TLIN 303



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 61/166 (36%), Gaps = 45/166 (27%)

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG------ 464
           M   G  PS      L+ + V+S  + +AF++   M+K  F P    Y +LI        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 465 ----LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
               LC    + EA +LF  + + +  P    YN MI GY   G++              
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY---GSA-------------- 103

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                             GK+ EA  LL +    G  PSV  YN +
Sbjct: 104 ------------------GKFDEAYGLLERQKAKGSIPSVIAYNCI 131


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 228/493 (46%), Gaps = 39/493 (7%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NR 168
           +I A+  S L  +AL  ++ ++D     P     NSLL  ++     +     + E  +R
Sbjct: 137 VISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDR 196

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
              ++D Y+  I+ KG C+ G + +   ++ +    G  PN+V Y +LIDG CKNGDIER
Sbjct: 197 -NGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIER 255

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGL--------------------------------- 255
           A +LF+++   G + T  TY  +I                                    
Sbjct: 256 ANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIID 315

Query: 256 --FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
             FK+G + +  +    M  +G  P + TYN LI+  C++GKV E  +L +    R +  
Sbjct: 316 ARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFP 375

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N  +Y  LI    K      A  LL +M   G + ++I Y  L+ G   AGE D A  + 
Sbjct: 376 NKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVR 435

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++   G  P    YNVL+    K G    A  L+ EM ++ +TP       L+D F+R 
Sbjct: 436 DKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRH 495

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            ++++A +++ L  + G    V     +I G C  G M +A   F  M+     P++  Y
Sbjct: 496 GNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTY 555

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + +I GY K+ +   ALR+ G M +K   PN+ +++S I   C++G    AE +  +M  
Sbjct: 556 STIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRS 615

Query: 554 LGLKPSVSLYNIL 566
            G +P+V  Y IL
Sbjct: 616 FGFEPNVVTYTIL 628



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 203/434 (46%), Gaps = 11/434 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFF 164
            Y ++ID + K+   ++A   F ++   G  P   T+ +++    K   F   DK  +  
Sbjct: 239 FYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM 298

Query: 165 SENRCKVELDVYSFGIL---IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            E    V L +++ GI+    K  CE     +A + +  + E G  P++  Y +LI+G C
Sbjct: 299 KERGLAVSLQIFN-GIIDARFKHGCEI----EAADAVRWMIESGCEPDMATYNTLINGSC 353

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G +  A+ L       GL   + +YT LI    KNG      E   +M   G +  L 
Sbjct: 354 SKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLI 413

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+H     G+V     + D+M  R +  +   YN L+ GLCK+ R   A++LL +M
Sbjct: 414 AYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEM 473

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
               ++P+      L+DGF   G  D+A +LF      G   SVV  N +I+ + K G  
Sbjct: 474 LDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMM 533

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A    + M     +P E TY+ +ID +V+ +D+  A  M+ LM K    P+V T+  L
Sbjct: 534 NDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSL 593

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+G C  G++  A K+F  M     EPN V Y ++I  +CKEG   +A     +M     
Sbjct: 594 INGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKC 653

Query: 522 VPNIASYSSTIGVL 535
           +PN A+++  +  L
Sbjct: 654 IPNDATFNYLVNGL 667



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 171/327 (52%), Gaps = 1/327 (0%)

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEK-MQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           L+ T    + +I     +GL K+  E Y   + ++   P ++  N L++   + GKV   
Sbjct: 127 LIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIA 186

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            K++DEM  R    +  T   +  GLCKE +V+E   L+++    G  PN++ YN LIDG
Sbjct: 187 RKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDG 246

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           +C  G+ ++A  LF +LK  G  P+V TY  +I AF K G  +    L+ EM+ERG+  S
Sbjct: 247 YCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVS 306

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              +  +ID+  +     +A +    M +SG  PD+ TY  LI+G C KG ++EA +L  
Sbjct: 307 LQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLE 366

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
                 L PN   Y  +I  + K G   RA  LL EM+E+G   ++ +Y + +  L   G
Sbjct: 367 HAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAG 426

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +   A  + ++M++ G+ P  ++YN+L
Sbjct: 427 EVDVALTVRDKMMERGILPDANIYNVL 453



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 193/394 (48%), Gaps = 1/394 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEM-GFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +   +I     +G + +A E+ N + ++    P+V    SL++    +G +E A+ ++ +
Sbjct: 133 ALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDE 192

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +       +T  ++  GL K G  ++G    EK    G  P++  YN LI  YC  G 
Sbjct: 193 MVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGD 252

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +     LF E++ +     V TY  +I   CK+ + +  ++LL +MK  G++ ++  +N 
Sbjct: 253 IERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNG 312

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID     G   +A      +  +G  P + TYN LI      G  + A +L+     RG
Sbjct: 313 IIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG 372

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P++ +YT LI +F ++ +  +A E+   M + G + D+  YG L+HGL + G +  A 
Sbjct: 373 LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVAL 432

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            + + M E  + P+  +YN+++ G CK+G    A +LL EM ++ + P+    ++ +   
Sbjct: 433 TVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGF 492

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            + G   EA+ L    ++ G+  SV   N + + 
Sbjct: 493 IRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKG 526



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 207/455 (45%), Gaps = 30/455 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           +++  IIDA  K     +A      M++SG  P   T+N+L   +  SCS  KG +  +E
Sbjct: 308 QIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTL---INGSCS--KGKVREAE 362

Query: 167 N------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                  R  +  + +S+  LI    + G+  +A E+L ++ E G + +++ Y +L+ G 
Sbjct: 363 ELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGL 422

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
              G+++ A  +  K+ E G++   + Y VL+ GL K G      +   +M    V+P  
Sbjct: 423 VVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDA 482

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           +    L+  +   G + E  KLF     R +  +VV  N +I G CK   + +A     +
Sbjct: 483 FVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKR 542

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M     SP+  TY+ +IDG+    +   A R+F  +      P+VVT+  LI  F + G+
Sbjct: 543 MFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGD 602

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  +  EM   G  P+ VTYTILI  F +   + KA   +  M  +   P+  T+  
Sbjct: 603 LNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNY 662

Query: 461 LIHGLCMKGNMKEASKLFNSM---------------WETKLEPNDVVYNMMIFGYCKEGN 505
           L++GL     +  +SK  NS                W+ ++      YN ++   C+   
Sbjct: 663 LVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRI----AAYNSILLCLCQHKM 718

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
              AL+L  +M  KG  P+  S+ + +  LC +G+
Sbjct: 719 VKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGR 753



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 172/358 (48%), Gaps = 13/358 (3%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D   + +L+ G C+ G    A ++L ++ +   +P+  +  +L+DG  ++G+++ AK LF
Sbjct: 446 DANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLF 505

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV-SPSLYTYNCLIHEYCN 292
           +   E G+  +      +I G  K G+  D    +++M  NGV SP  +TY+ +I  Y  
Sbjct: 506 QLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRM-FNGVHSPDEFTYSTIIDGYVK 564

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +  +    ++F  M  +    NVVT+ +LI G C+   +  AE++ ++M+  G  PNV+T
Sbjct: 565 QNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVT 624

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF---------SKAGNSK- 402
           Y  LI  FC  G+  KA   F Q+  N   P+  T+N L+            SK  NS+ 
Sbjct: 625 YTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQP 684

Query: 403 -MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            +  +    M   G       Y  ++    +   ++ A +++  M   GF PD  ++  L
Sbjct: 685 NLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIAL 744

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           +HGLC++G +++ + +    +  +     V Y+  +  +  EG +  A  LL  + EK
Sbjct: 745 LHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEK 802



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 1/269 (0%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ-MKMAGISPNVITYNKLIDGF 360
           L + M+ +E+       + +I        V+EA  L +  + +    P+V   N L++  
Sbjct: 118 LLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLL 177

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G+ + A ++++++          T  ++ +   K G  +    L+ +   +G  P+ 
Sbjct: 178 VHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNI 237

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           V Y  LID + ++ D+E+A  ++  ++  GF P V TYG +I+  C KG  +   KL   
Sbjct: 238 VFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVE 297

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  L  +  ++N +I    K G    A   +  M E G  P++A+Y++ I   C  GK
Sbjct: 298 MKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGK 357

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             EAE LL   ++ GL P+   Y  L  A
Sbjct: 358 VREAEELLEHAIRRGLFPNKFSYTPLIHA 386



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 8/209 (3%)

Query: 370 FRLFNQ-------LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE-MEERGITPSEV 421
           FR+F +       +KS    P+    + +I A++ +G  K A +L    ++     P   
Sbjct: 109 FRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVF 168

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
               L++  V    +E A ++Y  M       D YT  ++  GLC +G ++E   L    
Sbjct: 169 ACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKR 228

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
           W     PN V YN +I GYCK G+  RA  L  E+  KG +P + +Y + I   C+ GK+
Sbjct: 229 WGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKF 288

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
              + LL +M + GL  S+ ++N +  A+
Sbjct: 289 EAVDKLLVEMKERGLAVSLQIFNGIIDAR 317


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 238/499 (47%), Gaps = 39/499 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y  IID   KS+  D+A     QM+++G RP S T+NSL+                    
Sbjct: 263 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 322

Query: 149 ----IFVIKSCSFDKGWLF----FSENRCKVE--------LDVYSFGILIKGCCEAGD-- 190
               I  + +C+     LF     +E +C  +         D+ S+  ++ G   A D  
Sbjct: 323 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 382

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L     + N +   G +PN  ++  LI+   + G +++A ++F  +   G++    T+  
Sbjct: 383 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 442

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L + G   D    +  M   GV PS   Y CLI   CN G++ +  +L  EM +++
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502

Query: 311 VACNVVTY-NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +    V Y +++I  LCKE RV E + ++D M   G  PNV+T+N L++G+C  G  ++A
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F L + + S G  P+   Y  L+  + K G    A  + R+M  +G+ P+ V Y+I++  
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++     A +M+  M +SG +  ++TYGV++ GLC      EA+ L   ++   ++ +
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N++I    K G    A  L   ++  GLVPNI +YS  I  L ++  + EA+ L  
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 742

Query: 550 QMLKLGLKPSVSLYNILYR 568
            + K G      L N + R
Sbjct: 743 SVEKSGHASDSRLLNHIVR 761



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 4/460 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           S+I   +K    D+A   F +M++ GV P+    NS++  + K    DK      +    
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  D++++ ++I G C++  ++KA  VL Q+ E G  PN + Y SLI G   +G    +
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +F+++   G++ T       I  LFK+G   +    ++ M L G  P + +Y+ ++H 
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 290 Y--CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           Y    +  +++   +F+ M  + +A N   +N LI    +   + +A  + + M+  G+ 
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 434

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +T+  +I   C  G  D A   FN +   G  PS   Y  LI+     G    A +L
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM  + I P  V Y + +I++  +   + +  ++  +M ++G  P+V T+  L+ G C
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 554

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + GNM+EA  L ++M    +EPN  +Y  ++ GYCK G    AL +  +M  KG+ P   
Sbjct: 555 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 614

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS  +  L Q  +   A+ + ++M++ G   S+  Y ++
Sbjct: 615 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 654



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 39/431 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +S+  LI G  + G+++KA  +  ++ E G  P ++I  S+I   CK  ++++A+ + 
Sbjct: 190 DDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 248

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ + G+     TY+++I GL K+          E+M   G  P+  TYN LIH Y   
Sbjct: 249 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 308

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G  +E  ++F +M    V   V   N+ I  L K  R  EA+ + D M + G  P++I+Y
Sbjct: 309 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 368

Query: 354 NKLIDGFCDAGET--DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + ++ G+  A ++       +FN + + G +P+   +N+LI A+++ G    A  +  +M
Sbjct: 369 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 428

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG------- 464
           + +G+ P  VT+  +I S  R   ++ A   ++ M   G  P    YG LI G       
Sbjct: 429 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 488

Query: 465 -----------------------------LCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                                        LC +G + E   + + M +T   PN V +N 
Sbjct: 489 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 548

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ GYC  GN   A  LL  M   G+ PN   Y + +   C++G+  +A  +   ML  G
Sbjct: 549 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 608

Query: 556 LKPSVSLYNIL 566
           +KP+  LY+I+
Sbjct: 609 VKPTSVLYSII 619



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 194/400 (48%), Gaps = 45/400 (11%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL---GLVATQHTYTVLICGLFKNGLQKDG 264
           P +  Y  LID C +   + R  +    +G L   GL     +Y+ LI G  K+G     
Sbjct: 154 PTIHTYNILID-CYRR--VHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA 209

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              + +M   GV P +   N +I E C   ++ +   +  +M    +A ++ TY+ +I G
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS------ 378
           LCK   + +AER+L+QM  AG  PN ITYN LI G+  +G  +++ R+F Q+ S      
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329

Query: 379 -----------------------------NGQSPSVVTYNVLIRAFSKAGNSKMAS--DL 407
                                         G  P +++Y+ ++  ++ A +S +A   ++
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 389

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M  +GI P++  + ILI+++ R   M+KA  ++  MQ  G  PD  T+  +I  LC 
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIA 526
            G + +A   FN M +  + P++ VY  +I G C  G   +A  L+ EM  K +  P + 
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +SS I  LC++G+  E + +++ M++ G +P+V  +N L
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 549



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 207/441 (46%), Gaps = 10/441 (2%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F+ ML  G+ P  + FN L+    +    DK  L F + + K  + D  +F  +I   C 
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A    N + ++G  P+  +Y  LI GCC +G++ +AK L  ++    +      
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           Y + +I  L K G   +G +  + M   G  P++ T+N L+  YC  G + E F L D M
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 569

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  N   Y TL+ G CK  R+ +A  +   M   G+ P  + Y+ ++ G   A  T
Sbjct: 570 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 629

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A ++F+++  +G + S+ TY V++    +   +  A+ L+ ++    +    +T+ I+
Sbjct: 630 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 689

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  +    ++A E++  +   G  P++ TY ++I  L  + + +EA  LF S+ ++  
Sbjct: 690 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 749

Query: 487 EPNDVVYNM---MIFGYCKEGNSYRALRLLGEMN---EKGLVPNIASYSSTIGVLCQDGK 540
             +  + N    M+    +   +   L ++GE N   E   +  +AS  S  G++   G 
Sbjct: 750 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI--KGL 807

Query: 541 WPEAEVLLNQMLKLGLKPSVS 561
           +  A      +L+L L  +VS
Sbjct: 808 FGTAPAPAPALLELELSQTVS 828



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 197/403 (48%), Gaps = 8/403 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++  +I+A+ +  + D+A+  F  M + G+ P + TF +++  + +    D     F+ 
Sbjct: 403 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 462

Query: 167 NRCKVELDVYS----FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-TSLIDGCC 221
               V++ V      +G LI+GCC  G+L KA E+++++      P  V Y +S+I+  C
Sbjct: 463 ---MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +   K +   + + G      T+  L+ G    G  ++ F   + M   G+ P+ Y
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 579

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+  YC  G++ +   +F +M H+ V    V Y+ ++ GL +  R   A+++  +M
Sbjct: 580 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 639

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G + ++ TY  ++ G C    TD+A  L  +L +      ++T+N++I A  K G  
Sbjct: 640 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 699

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A +L   +   G+ P+  TY+++I + ++ +  E+A  ++  ++KSG + D      +
Sbjct: 700 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 759

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           +  L  K  + +AS   + + E  L       +++   + +EG
Sbjct: 760 VRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 802



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 2/352 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGI 180
           D AL  F+ M+D GV P    +  L+          K     SE  N+      V  F  
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+ G + +  ++++ + + G  PNVV + SL++G C  G++E A  L   +  +G
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    + Y  L+ G  KNG   D    +  M   GV P+   Y+ ++H      + +   
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 633

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F EM       ++ TY  ++ GLC+     EA  LL+++    +  ++IT+N +I   
Sbjct: 634 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G   +A  LF+ + + G  P++ TY+++I    K  + + A +L   +E+ G     
Sbjct: 694 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 753

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
                ++   +   ++ KA    S++ ++  + +  T  +L      +G +K
Sbjct: 754 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 805



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P++ TYN+LI  + +     +   +V  + + G+ P + +Y+ LI  FV+  +++KA  +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M + G  P +     +I  LC    M +A  +   M ++ + P+   Y+++I G CK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                +A R+L +M E G  PN  +Y+S I      G W E+  +  QM   G+ P+V  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 563 YNILYRA 569
            N    A
Sbjct: 333 CNSFIHA 339


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 216/479 (45%), Gaps = 40/479 (8%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE--LDVYSFGILIKGC 185
           Y  ++ DS   P     N+LL  V+KS   +     + E  C+    +D YS  I++KG 
Sbjct: 159 YVVELYDS--VPDVIACNALLSLVVKSRRLEDARKVYDE-MCERGGCVDNYSTCIMVKGM 215

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G + +  +++      G  PN+V Y ++I G CK GDIE AK++F+++   G + T 
Sbjct: 216 CSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTL 275

Query: 246 HTYTVLICGL-----------------------------------FKNGLQKDGFEFYEK 270
            T+  +I G                                    +++G + D  E    
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           +  N   P + TYN LI+  C EGK      L DE   + +    ++Y  LI   CK   
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
              A +LL Q+   G  P+++TY  LI G   +G  D A  +  +L   G SP    YN+
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+    K G    A  L  EM +R I P    Y  LID F+RS D ++A ++++L  + G
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
              DV  +  +I G C  G + EA    N M E  L P+   Y+ +I GY K+ +   A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++  +M +    PN+ +Y+S I   C  G +  AE    +M    L P+V  Y  L R+
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRS 634



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 185/417 (44%), Gaps = 18/417 (4%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N CK   D+ ++ ILI   C+ G    A  +L++  + G     + Y  LI   CK+ + 
Sbjct: 339 NDCKP--DIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEY 396

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  ++ E G      TY +LI GL  +G   D      K+   GVSP    YN L
Sbjct: 397 DIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C  G+      LF EM  R +  +   Y TLI G  +     EA ++       G+
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGV 516

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             +V+ +N +I GFC +G  D+A    N++      P   TY+ +I  + K  +   A  
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + R+ME+    P+ VTYT LI+ F    D   A E +  MQ     P+V TY  LI    
Sbjct: 577 IFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFA 636

Query: 467 MKGN-MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE--------------GNSYRALR 511
            + + +++A   +  M   K  PN+V +N ++ G+ K+              G S+    
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFE 696

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS-VSLYNILY 567
               M   G   + A+Y+S +  LC  G    A +L ++M+K G  P  VS   IL+
Sbjct: 697 FFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILH 753



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 19/408 (4%)

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           L  +E  CK   D+ ++GILI G   +G ++ A  +  +L + G SP+  IY  L+ G C
Sbjct: 404 LQLAERGCKP--DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G    AK+LF ++ +  ++   + Y  LI G  ++G   +  + +      GV   + 
Sbjct: 462 KTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVV 521

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            +N +I  +C  G + E     + M    +  +  TY+T+I G  K+  +  A ++   M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDM 581

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +     PNV+TY  LI+GFC  G+   A   F +++S    P+VVTY  LIR+F+K  ++
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESST 641

Query: 402 KMASDLVRE-MEERGITPSEVTYTILIDSFVRS---------DDMEKA-----FEMYSLM 446
              +    E M      P+EVT+  L+  FV+          D          FE +  M
Sbjct: 642 LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRM 701

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           +  G+S     Y  ++  LC+ G +K A  L + M +    P+ V +  ++ G+C  GNS
Sbjct: 702 KSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNS 761

Query: 507 YRALRL-LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
            +   +    ++EKGL   +  YS  +          EA  +L+ M++
Sbjct: 762 KQWRNMDFRNLDEKGLEVAV-RYSRVLEQHLPKAVICEASTILHAMVE 808



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 197/419 (47%), Gaps = 71/419 (16%)

Query: 187 EAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           E+G L+KA E+ + + E+  S P+V+   +L+    K+  +E A+ ++ ++ E G     
Sbjct: 146 ESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDN 205

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           ++  +++ G+                                   C+EGKV EG KL ++
Sbjct: 206 YSTCIMVKGM-----------------------------------CSEGKVEEGRKLIED 230

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
              +    N+V YNT+I G CK   ++ A+ +  ++K+ G  P + T+  +I+GFC  G+
Sbjct: 231 RWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGD 290

Query: 366 TDKAFRLFNQLK-----------------------------------SNGQSPSVVTYNV 390
              + RL  ++K                                   +N   P + TYN+
Sbjct: 291 FVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNI 350

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    K G  ++A+ L+ E  ++G+  + ++Y  LI ++ +S + + A ++   + + G
Sbjct: 351 LINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERG 410

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD+ TYG+LIHGL + G+M +A  +   + +  + P+  +YNM++ G CK G    A 
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  EM ++ ++P+   Y++ I    + G + EA  +    ++ G+K  V  +N + + 
Sbjct: 471 LLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKG 529



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 174/378 (46%), Gaps = 15/378 (3%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S+  LI+  C++ + + A ++L QL E G  P++V Y  LI G   +G ++ A  +  K+
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G+      Y +L+ GL K G        + +M    + P  Y Y  LI  +   G  
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  K+F     + V  +VV +N +I G C+   + EA   +++M    + P+  TY+ +
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           IDG+    +   A ++F  ++ N   P+VVTY  LI  F   G+  +A +  +EM+ R +
Sbjct: 562 IDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDL 621

Query: 417 TPSEVTYTILIDSFVR-SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            P+ VTYT LI SF + S  +EKA   + LM  +   P+  T+  L+ G   K + +   
Sbjct: 622 VPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLG 681

Query: 476 K--------------LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           +               F+ M       +   YN ++   C  G    A  L   M +KG 
Sbjct: 682 EPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGF 741

Query: 522 VPNIASYSSTIGVLCQDG 539
            P+  S+++ +   C  G
Sbjct: 742 SPDPVSFAAILHGFCVVG 759



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 165/376 (43%), Gaps = 53/376 (14%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A   F +MLD  + P +  + +L+   I+S  FD+    F+ +  K V++DV     +IK
Sbjct: 469 AKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIK 528

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C +G L++A   +N++ E    P+   Y+++IDG  K  D+  A  +FR         
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR--------- 579

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                                      M+ N   P++ TY  LI+ +C +G  S   + F
Sbjct: 580 --------------------------DMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETF 613

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMR-VQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            EM+ R++  NVVTY TLI    KE   +++A    + M      PN +T+N L+ GF  
Sbjct: 614 KEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673

Query: 363 A------GETDK--------AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
                  GE D          F  F+++KS+G S     YN ++      G  K A  L 
Sbjct: 674 KTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQ 733

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCM 467
             M ++G +P  V++  ++  F    + ++   M +  + + G    V    VL   L  
Sbjct: 734 DRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHL-P 792

Query: 468 KGNMKEASKLFNSMWE 483
           K  + EAS + ++M E
Sbjct: 793 KAVICEASTILHAMVE 808



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 24/363 (6%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           ++SG   +  F P  LL   +++   S  P   + +Y ++ID  ++S   D+A   F   
Sbjct: 456 LMSGLCKTGRFLPAKLL--FSEMLDRSILP--DAYVYATLIDGFIRSGDFDEARKVFTLS 511

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           ++ GV+      N+++    +S   D+     +  N   +  D +++  +I G  +  D+
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             A ++   +E+    PNVV YTSLI+G C  GD   A+  F+++    LV    TYT L
Sbjct: 572 ATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTL 631

Query: 252 ICGLFKNG--LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC--------------NEGK 295
           I    K    L+K  + ++E M  N   P+  T+NCL+  +               N G+
Sbjct: 632 IRSFAKESSTLEKAVY-YWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQ 690

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
               F+ F  M+    + +   YN+++  LC    V+ A  L D+M   G SP+ +++  
Sbjct: 691 SFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAA 750

Query: 356 LIDGFCDAGETDKAFRL-FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           ++ GFC  G + +   + F  L   G   +V    VL +   KA   + AS ++  M E+
Sbjct: 751 ILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICE-ASTILHAMVEK 809

Query: 415 GIT 417
             T
Sbjct: 810 ADT 812



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 12/210 (5%)

Query: 371 RLFNQLKS---NGQSPSV-VTYNVL---IRAFSKAGNSKMAS---DLVREMEERGITPSE 420
           R+FN+++    N ++ +V +T+  L   + A++++G    A    D V E+ +    P  
Sbjct: 113 RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDS--VPDV 170

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +    L+   V+S  +E A ++Y  M + G   D Y+  +++ G+C +G ++E  KL   
Sbjct: 171 IACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIED 230

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
            W     PN V YN +I GYCK G+   A  +  E+  KG +P + ++ + I   C+ G 
Sbjct: 231 RWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGD 290

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
           +  ++ LL ++ + GL+  V   N +  AK
Sbjct: 291 FVASDRLLEEVKERGLRVCVWFLNNIIDAK 320


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 237/504 (47%), Gaps = 36/504 (7%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P    R +  +I  + K      A   F  M   G+ P +  F SL+     +       
Sbjct: 260 PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGAL 319

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               E + + +EL + ++ ILI G  +  D   A  +  + +    S N +IY+++I   
Sbjct: 320 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 379

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G++ERA+ L R++ E G+ A    Y  ++ G      +      +E+++  G  PS+
Sbjct: 380 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 439

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            +Y CL++ Y   GKV++   +  EM    +  N  TY+ LI G         A  + ++
Sbjct: 440 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 499

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKA------------------FR----------- 371
           M  +G+ P+   YN LI+ FC  G  D+A                  FR           
Sbjct: 500 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 559

Query: 372 ------LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                   + ++ +G  P+V+TYN LI    +    + A  ++ +M   GITP+E TYTI
Sbjct: 560 MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 619

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++  +  S D+ KAFE ++ +++SG   DVY Y  L+   C  G M+ A  +   M   K
Sbjct: 620 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 679

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +  N  +YN++I G+ + G+ + A  L+ +M E G+ PNI +Y+S I   C+ G    AE
Sbjct: 680 IPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAE 739

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            ++ +M+ +GLKP+V  Y  L + 
Sbjct: 740 KVIEEMVDVGLKPNVKTYTTLIKG 763



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 1/429 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH +S   ++A     +M + G+    + ++S++       + +K  + F   
Sbjct: 371 IYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL 430

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C  +  + S+G L+    + G + KA  +  ++E  G   N   Y+ LI+G     D 
Sbjct: 431 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDF 490

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F ++   GL   +  Y +LI    K G         EKMQ   + PS   +  +
Sbjct: 491 ANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 550

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y   G +       D MR       V+TYN LI GL ++ +VQ A  +LD+M +AGI
Sbjct: 551 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGI 610

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  
Sbjct: 611 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 670

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I+  C
Sbjct: 671 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 730

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A K+   M +  L+PN   Y  +I G+ +     RAL+   EM   GL P+ A
Sbjct: 731 KAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEA 790

Query: 527 SYSSTIGVL 535
           SY   +  L
Sbjct: 791 SYHCLVTSL 799



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +++ ++K     +AL    +M   G++  + T++ L+   I    F   +  F E  
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 561

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G V T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 562 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 622 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 681

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 682 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 741

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + R    ++A + +  M+ +G  PD  +Y  L+  L  
Sbjct: 742 IEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 801

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 802 RATVMEGS 809



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + ++I  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 257 ERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 316

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A      M    LE   V Y+++I G+ K  +S  A  L  E   K    N   YS+ I
Sbjct: 317 GALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNII 376

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+ +M + G+   + +Y+
Sbjct: 377 HAHCQSGNMERAEELVREMEEDGIDAPIDVYH 408


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 207/399 (51%), Gaps = 1/399 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           ++DV     L+KG C  G + +A  +L++  + GF  + V Y ++I+G CK G    A  
Sbjct: 137 QIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQ 196

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +F K+ ++ +      Y  +I GL K GL  +      +M  NG+   +Y+YN +IH +C
Sbjct: 197 MFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFC 256

Query: 292 NEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           + G+     KL DEM  R +V  +V T+N LI GLCK  RV EA  ++  M   G  P++
Sbjct: 257 SVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDI 316

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           ++YN L++G+C +G   +A ++F+++      P+V++Y  LI  + K      A  L+ E
Sbjct: 317 VSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTE 376

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M  + + P  VTY  L+D   +S      +++   M+ SG   D+ TY VL+        
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
             +A  LF  + E  + PN   YN+++ G CK G    A  +   ++ KG  PNI +Y+ 
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNI 496

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            I  LC++G   EAE LL +M+     P+   ++ + RA
Sbjct: 497 MIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 212/426 (49%), Gaps = 3/426 (0%)

Query: 144 FNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           FN LL  +IK   ++     ++  +++  ++  + +F ILI    + G +  AF +L  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            +MGF  +V I T+L+ G C  G +  A  L  +  + G    +  Y  +I GL K G  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           +D  + + KM+   V P+L  YN +I   C +G V E   L  EM    +  +V +YN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 322 ICGLCKEMRVQEAERLLDQMKMAG-ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
           I G C   R Q A +LLD+M + G + P+V T+N LIDG C  G   +A+ +   +   G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
             P +V+YN L+  +  +G+   A  +  +M ER   P+ ++Y  LI+ + +   +++A 
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
            + + M      PD  TY  L+ GL   G       L  +M  +    + + YN+++  Y
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            K     +AL L   + E G+ PNI +Y+  +  LC+ G+   A+ +   +   G +P++
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNI 491

Query: 561 SLYNIL 566
             YNI+
Sbjct: 492 RTYNIM 497



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 165/344 (47%), Gaps = 8/344 (2%)

Query: 94  QLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           Q+FP          L  Y ++ID   K  L D+A     +M+++G+     ++NS++   
Sbjct: 196 QMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGF 255

Query: 152 IKSCSFDKGWLFFSEN--RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
                F        E   R KV  DVY+F ILI G C+ G +++A+ V+  + + G+ P+
Sbjct: 256 CSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           +V Y +L++G C +G +  AK +F K+ E   +    +Y  LI G  K  +  +      
Sbjct: 316 IVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLT 375

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M    + P   TYNCL+      G+    + L + MR      +++TYN L+    K  
Sbjct: 376 EMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHE 435

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
           +  +A  L   +   GISPN+ TYN L+DG C +G    A  +F  L + G  P++ TYN
Sbjct: 436 KFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYN 495

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           ++I    K G    A  L+ +M      P+ +T+    D+ VR+
Sbjct: 496 IMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITF----DTIVRA 535



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 2/362 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y +II+   K   +  A+  F +M    V P    +N+++  + K    D+     +E  
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMV 237

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDI 226
              +ELDVYS+  +I G C  G    A ++L+++   G   P+V  +  LIDG CK G +
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +   + + G      +Y  L+ G   +G   +  + ++KM      P++ +Y  L
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC    V E   L  EM ++ +  + VTYN L+ GL K  R      L++ M+ +G 
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             ++ITYN L+D +    + DKA  LF  +   G SP++ TYN+L+    K+G  K A +
Sbjct: 418 PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKE 477

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + + +  +G  P+  TY I+I    +   +++A  +   M  + + P+  T+  ++  + 
Sbjct: 478 IFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537

Query: 467 MK 468
           +K
Sbjct: 538 VK 539


>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
          Length = 879

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 237/504 (47%), Gaps = 36/504 (7%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P    R +  +I  + K      A   F  M   G+ P +  F SL+     +       
Sbjct: 238 PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGAL 297

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               E + + +EL + ++ ILI G  +  D   A  +  + +    S N +IY+++I   
Sbjct: 298 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 357

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G++ERA+ L R++ E G+ A    Y  ++ G      +      +E+++  G  PS+
Sbjct: 358 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 417

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            +Y CL++ Y   GKV++   +  EM    +  N  TY+ LI G         A  + ++
Sbjct: 418 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 477

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKA------------------FR----------- 371
           M  +G+ P+   YN LI+ FC  G  D+A                  FR           
Sbjct: 478 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 537

Query: 372 ------LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                   + ++ +G  P+V+TYN LI    +    + A  ++ +M   GITP+E TYTI
Sbjct: 538 MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 597

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++  +  S D+ KAFE ++ +++SG   DVY Y  L+   C  G M+ A  +   M   K
Sbjct: 598 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 657

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +  N  +YN++I G+ + G+ + A  L+ +M E G+ PNI +Y+S I   C+ G    AE
Sbjct: 658 IPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAE 717

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            ++ +M+ +GLKP+V  Y  L + 
Sbjct: 718 KVIEEMVDVGLKPNVKTYTTLIKG 741



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 1/429 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH +S   ++A     +M + G+    + ++S++       + +K  + F   
Sbjct: 349 IYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL 408

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C  +  + S+G L+    + G + KA  +  ++E  G   N   Y+ LI+G     D 
Sbjct: 409 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDF 468

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F ++   GL   +  Y +LI    K G         EKMQ   + PS   +  +
Sbjct: 469 ANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 528

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y   G +       D MR       V+TYN LI GL ++ +VQ A  +LD+M +AGI
Sbjct: 529 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGI 588

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  
Sbjct: 589 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 648

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I+  C
Sbjct: 649 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 708

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A K+   M +  L+PN   Y  +I G+ +     RAL+   EM   GL P+ A
Sbjct: 709 KAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEA 768

Query: 527 SYSSTIGVL 535
           SY   +  L
Sbjct: 769 SYHCLVTSL 777



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +++ ++K     +AL    +M   G++  + T++ L+   I    F   +  F E  
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 539

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G V T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 540 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 599

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 600 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 659

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 660 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 719

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + R    ++A + +  M+ +G  PD  +Y  L+  L  
Sbjct: 720 IEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 779

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 780 RATVMEGS 787



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + ++I  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 235 ERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 294

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A      M    LE   V Y+++I G+ K  +S  A  L  E   K    N   YS+ I
Sbjct: 295 GALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNII 354

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+ +M + G+   + +Y+
Sbjct: 355 HAHCQSGNMERAEELVREMEEDGIDAPIDVYH 386


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 194/365 (53%), Gaps = 2/365 (0%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           ++A +V   +   GF P++   T L++   K+   +    +++K+ +LG+VA  H Y VL
Sbjct: 153 HEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVL 212

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K+G  +   +   +M+L  V P L+TYN LI  YC +G   E   + D M    +
Sbjct: 213 LHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGI 272

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
           + ++ TYN+LI G C+E R++EA +L   +K   ++PN +TY  LIDG+C   + D+A R
Sbjct: 273 SPDIFTYNSLIYGFCREGRMREAVQLFRDIK--DVTPNHVTYTSLIDGYCRVNDLDEALR 330

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L   +   G  P+V+TYN ++R   + G  + A+ L+ EM ER I P  VT   LI+++ 
Sbjct: 331 LKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYC 390

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  DM  A ++   M  +G   D +TY  LIHG C    + +A +L   M +    P+  
Sbjct: 391 KIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYC 450

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y+ ++  YCK+ N    ++L  E+  +GL  +++ Y + I   C+  K   A+ +L  M
Sbjct: 451 TYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLM 510

Query: 552 LKLGL 556
              G+
Sbjct: 511 KDKGI 515



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 258/554 (46%), Gaps = 51/554 (9%)

Query: 25  PLKAFSLFNW--ASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSS 82
           P  +++LF W  +S    +H+ QS   +L +L    + H H       L+ I+ +     
Sbjct: 63  PCLSWALFKWIESSVPNYKHSLQSSWTMLYIL----TKHKHFKTAHAFLENIAFK---DF 115

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
            + +S+L  L ++     +P   S +   ++  +  S+++ +A+  F  M  +G RP  +
Sbjct: 116 LSTQSVLSSLVKI---HDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLH 172

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
               LL  + K    D  W                                  ++  ++ 
Sbjct: 173 ACTVLLNSLAKDRLTDTVW----------------------------------KIYKKMV 198

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           ++G   N+ +Y  L+  CCK+GD+E+A+ +  ++    +     TY  LI    K G+  
Sbjct: 199 KLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHY 258

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +     ++M++ G+SP ++TYN LI+ +C EG++ E  +LF +++  +V  N VTY +LI
Sbjct: 259 EALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIK--DVTPNHVTYTSLI 316

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            G C+   + EA RL + M   G+ P VITYN ++   C+ G    A  L N++      
Sbjct: 317 DGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIE 376

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P  VT N LI A+ K G+ + A  +  +M   G+   + TY  LI  F ++ +++KA E+
Sbjct: 377 PDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKEL 436

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
              M  +GFSP   TY  L+   C + N +   KL + +    L  +  VY  +I  +CK
Sbjct: 437 LFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCK 496

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                 A R+LG M +KG+  +   Y+S      + GK      +L++M K  L  ++ +
Sbjct: 497 IEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRLMITLKI 556

Query: 563 Y---NILYRAKNNI 573
           Y   N  Y + N+I
Sbjct: 557 YRSFNASYASDNSI 570



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 170/348 (48%), Gaps = 2/348 (0%)

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  +   G     H  TVL+  L K+ L    ++ Y+KM   GV  +++ YN L
Sbjct: 153 HEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVL 212

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +H  C  G V +  K+  EM  + V  ++ TYNTLI   CK+    EA  + D+M+MAGI
Sbjct: 213 LHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGI 272

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP++ TYN LI GFC  G   +A +LF  +K    +P+ VTY  LI  + +  +   A  
Sbjct: 273 SPDIFTYNSLIYGFCREGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALR 330

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L   M E+G+ P+ +TY  ++        +  A  + + M +    PD  T   LI+  C
Sbjct: 331 LKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYC 390

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A K+ + M    L+ +   Y  +I G+CK     +A  LL  M + G  P+  
Sbjct: 391 KIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYC 450

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +YS  +   C+         L +++++ GL   VS+Y  L R    IE
Sbjct: 451 TYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIE 498


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 238/499 (47%), Gaps = 39/499 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y  IID   KS+  D+A     QM+++G RP S T+NSL+                    
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180

Query: 149 ----IFVIKSCSFDKGWLF----FSENRCKVE--------LDVYSFGILIKGCCEAGD-- 190
               I  + +C+     LF     +E +C  +         D+ S+  ++ G   A D  
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L     + N +   G +PN  ++  LI+   + G +++A ++F  +   G++    T+  
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L + G   D    +  M   GV PS   Y CLI   CN G++ +  +L  EM +++
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 311 VACNVVTY-NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +    V Y +++I  LCKE RV E + ++D M   G  PNV+T+N L++G+C  G  ++A
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F L + + S G  P+   Y  L+  + K G    A  + R+M  +G+ P+ V Y+I++  
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++     A +M+  M +SG +  ++TYGV++ GLC      EA+ L   ++   ++ +
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N++I    K G    A  L   ++  GLVPNI +YS  I  L ++  + EA+ L  
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 550 QMLKLGLKPSVSLYNILYR 568
            + K G      L N + R
Sbjct: 601 SVEKSGHASDSRLLNHIVR 619



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 4/460 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           S+I   +K    D+A   F +M++ GV P+    NS++  + K    DK      +    
Sbjct: 53  SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 112

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  D++++ ++I G C++  ++KA  VL Q+ E G  PN + Y SLI G   +G    +
Sbjct: 113 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 172

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +F+++   G++ T       I  LFK+G   +    ++ M L G  P + +Y+ ++H 
Sbjct: 173 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 232

Query: 290 Y--CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           Y    +  +++   +F+ M  + +A N   +N LI    +   + +A  + + M+  G+ 
Sbjct: 233 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 292

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +T+  +I   C  G  D A   FN +   G  PS   Y  LI+     G    A +L
Sbjct: 293 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 352

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM  + I P  V Y + +I++  +   + +  ++  +M ++G  P+V T+  L+ G C
Sbjct: 353 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 412

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + GNM+EA  L ++M    +EPN  +Y  ++ GYCK G    AL +  +M  KG+ P   
Sbjct: 413 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 472

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS  +  L Q  +   A+ + ++M++ G   S+  Y ++
Sbjct: 473 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 512



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 205/431 (47%), Gaps = 39/431 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +S+  LI G  + G+++KA  +  ++ E G  P ++I  S+I   CK  ++++A+ + 
Sbjct: 48  DDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 106

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ + G+     TY+++I GL K+          E+M   G  P+  TYN LIH Y   
Sbjct: 107 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 166

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G  +E  ++F +M    V   V   N+ I  L K  R  EA+ + D M + G  P++I+Y
Sbjct: 167 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 226

Query: 354 NKLIDGFCDAGETDKA--FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + ++ G+  A ++  A    +FN + + G +P+   +N+LI A+++ G    A  +  +M
Sbjct: 227 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 286

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG------- 464
           + +G+ P  VT+  +I S  R   ++ A   ++ M   G  P    YG LI G       
Sbjct: 287 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 346

Query: 465 -----------------------------LCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                                        LC +G + E   + + M +T   PN V +N 
Sbjct: 347 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 406

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ GYC  GN   A  LL  M   G+ PN   Y + +   C++G+  +A  +   ML  G
Sbjct: 407 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 466

Query: 556 LKPSVSLYNIL 566
           +KP+  LY+I+
Sbjct: 467 VKPTSVLYSII 477



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 194/400 (48%), Gaps = 45/400 (11%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL---GLVATQHTYTVLICGLFKNGLQKDG 264
           P +  Y  LID C +   + R  +    +G L   GL     +Y+ LI G  K+G     
Sbjct: 12  PTIHTYNILID-CYRR--VHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA 67

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              + +M   GV P +   N +I E C   ++ +   +  +M    +A ++ TY+ +I G
Sbjct: 68  HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS------ 378
           LCK   + +AER+L+QM  AG  PN ITYN LI G+  +G  +++ R+F Q+ S      
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 379 -----------------------------NGQSPSVVTYNVLIRAFSKAGNSKMAS--DL 407
                                         G  P +++Y+ ++  ++ A +S +A   ++
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M  +GI P++  + ILI+++ R   M+KA  ++  MQ  G  PD  T+  +I  LC 
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIA 526
            G + +A   FN M +  + P++ VY  +I G C  G   +A  L+ EM  K +  P + 
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +SS I  LC++G+  E + +++ M++ G +P+V  +N L
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 407



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 198/422 (46%), Gaps = 2/422 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F+ ML  G+ P  + FN L+    +    DK  L F + + K  + D  +F  +I   C 
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A    N + ++G  P+  +Y  LI GCC +G++ +AK L  ++    +      
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           Y + +I  L K G   +G +  + M   G  P++ T+N L+  YC  G + E F L D M
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  N   Y TL+ G CK  R+ +A  +   M   G+ P  + Y+ ++ G   A  T
Sbjct: 428 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 487

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A ++F+++  +G + S+ TY V++    +   +  A+ L+ ++    +    +T+ I+
Sbjct: 488 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 547

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  +    ++A E++  +   G  P++ TY ++I  L  + + +EA  LF S+ ++  
Sbjct: 548 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 607

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
             +  + N ++     +    +A   L  + E  L    ++ S    +  ++GK+ E   
Sbjct: 608 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIK 667

Query: 547 LL 548
           LL
Sbjct: 668 LL 669



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++  +I+A+ +  + D+A+  F  M + G+ P + TF +++  + +    D     F+ 
Sbjct: 261 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 320

Query: 167 NRCKVELDV----YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-TSLIDGCC 221
               V++ V      +G LI+GCC  G+L KA E+++++      P  V Y +S+I+  C
Sbjct: 321 ---MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 377

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +   K +   + + G      T+  L+ G    G  ++ F   + M   G+ P+ Y
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 437

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+  YC  G++ +   +F +M H+ V    V Y+ ++ GL +  R   A+++  +M
Sbjct: 438 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 497

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G + ++ TY  ++ G C    TD+A  L  +L +      ++T+N++I A  K G  
Sbjct: 498 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 557

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A +L   +   G+ P+  TY+++I + ++ +  E+A  ++  ++KSG + D      +
Sbjct: 558 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 617

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +  L  K  + +AS   + + E  L       +++   + +EG     ++LL
Sbjct: 618 VRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P++ TYN+LI  + +     +   +V  + + G+ P + +Y+ LI  FV+  +++KA  +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M + G  P +     +I  LC    M +A  +   M ++ + P+   Y+++I G CK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                +A R+L +M E G  PN  +Y+S I      G W E+  +  QM   G+ P+V  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 563 YNILYRA 569
            N    A
Sbjct: 191 CNSFIHA 197


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 244/520 (46%), Gaps = 53/520 (10%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLS-DQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKSCS 156
           SS   T   L   I++ H    L  + AL  F ++L    RP S + FNS+L  V ++ S
Sbjct: 6   SSGRRTCLELERIILNRHRSGSLGREDALNLFDELLPQA-RPASVHAFNSVLTVVARADS 64

Query: 157 FDKGW--------LFFSENRCKVEL---DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
                        LF +  R  V +   + Y  GILI+  C  G L+ AF       +MG
Sbjct: 65  SSSPRHSAALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMG 124

Query: 206 FSPNVVIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           +    V    LI G C     + A  M+FR++ ELG      +Y  LI GL      ++ 
Sbjct: 125 WRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEA 184

Query: 265 FEFYEKMQLNG---VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            E    M  +G    SP++ +Y+ +I  +  EG+V + + LFDEM  +    +VVTY++L
Sbjct: 185 LELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSL 244

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLCK   + +AE +L  M   G+ PN  TYN +I G+C  G+ ++A RL  ++  +G 
Sbjct: 245 IDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 304

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY------------------ 423
            P VVTY +LI+ + K G    A  +   M  +G  P+   Y                  
Sbjct: 305 QPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 364

Query: 424 -----------------TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
                             ILI ++ +   ++KA   ++ M+++G  PDV +Y  +IH LC
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 424

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +++A   FN M    L PN + +  +I G C  G   +   L  EM  +G+ P+  
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 484

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             ++ +  LC++G+  EA+   + ++ +G+KP+V  YN L
Sbjct: 485 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 226/483 (46%), Gaps = 3/483 (0%)

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           LL H+T     + +P   S  Y +IID   K    D+A F F +M+  G  P   T++SL
Sbjct: 187 LLLHMTADGGYNCSPNVVS--YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSL 244

Query: 148 LIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           +  + K+ + +K          K V  +  ++ I+I+G C  G L +A  +L ++   G 
Sbjct: 245 IDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 304

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P+VV Y  LI   CK G    A+ +F  +   G       Y +L+ G    G   D  +
Sbjct: 305 QPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 364

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             + M  +G+      +N LI  Y   G V +    F EMR   +  +VV+Y+T+I  LC
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 424

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  RV++A    +QM   G+SPN+I++  LI G C  GE  K   L  ++ + G  P  +
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 484

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
             N ++    K G    A D    +   G+ P+ V+Y  LID +     M+++ + +  M
Sbjct: 485 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRM 544

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  PD +TY  L++G    G +++A  L+  M+   ++   +  N+++ G  + G  
Sbjct: 545 VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRI 604

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L  +M ++G    I +Y++ +G LC++    EA  +   +     +  V  +NI+
Sbjct: 605 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIV 664

Query: 567 YRA 569
             A
Sbjct: 665 INA 667



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 227/513 (44%), Gaps = 62/513 (12%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           VT ++L + + D     R  D     F +M + G  P   ++N+L+          KG  
Sbjct: 130 VTLNQLIKGLCDG---KRTDDAMDMVFRRMPELGYTPDVFSYNALI----------KGLC 176

Query: 163 FFSENRCKVEL--------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
              +++  +EL              +V S+  +I G  + G+++KA+ + +++   GF P
Sbjct: 177 VEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPP 236

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y+SLIDG CK   + +A+ + + + + G++    TY ++I G    G  ++     
Sbjct: 237 DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLL 296

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY---------- 318
           +KM  +G+ P + TY  LI  YC  G+ +E   +FD M  +    N   Y          
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 356

Query: 319 -------------------------NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                                    N LIC   K   V +A     +M+  G+ P+V++Y
Sbjct: 357 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 416

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + +I   C  G  + A   FNQ+ S G SP+++++  LI      G  K   +L  EM  
Sbjct: 417 STVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 476

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI P  +    ++D+  +   + +A + + ++   G  P+V +Y  LI G C  G M E
Sbjct: 477 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDE 536

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           + K F+ M    L P+   YN ++ GY K G    AL L  EM  K +     + +  + 
Sbjct: 537 SIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILH 596

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L Q G+   A  L  +M+  G +  +  YN +
Sbjct: 597 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 1/429 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           +A   F  M+  G +P S  ++ LL  +  K    D   L     R  +  +  +F ILI
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
               + G ++KA     ++ + G  P+VV Y+++I   CK G +E A   F ++   GL 
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
               ++T LI GL   G  K   E   +M   G+ P     N ++   C EG+V E    
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           FD + H  V  NVV+YNTLI G C   ++ E+ +  D+M   G+ P+  TYN L++G+  
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  + A  L+ ++         +T N+++    +AG    A +L  +M +RG      T
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIET 625

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  ++     +  +++A  M+  ++   F  DV+T+ ++I+ L   G + EA  LF++M 
Sbjct: 626 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
                P+ + Y++MI    +EG    +  L   M + G   +    +  I  L + G   
Sbjct: 686 LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR 745

Query: 543 EAEVLLNQM 551
            A   L ++
Sbjct: 746 RAGTYLTKI 754



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 181/387 (46%), Gaps = 10/387 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++I    K    + A+++F+QM+  G+ P   +F SL+  +   CS  + W     L 
Sbjct: 416 YSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL---CSIGE-WKKVEELA 471

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  D      ++   C+ G + +A +  + +  +G  PNVV Y +LIDG C  
Sbjct: 472 FEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFV 531

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ +   F ++  +GL     TY  L+ G FKNG  +D    Y +M    V     T 
Sbjct: 532 GKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITS 591

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++H     G++    +L+ +M  R     + TYNT++ GLC+   V EA R+ + ++ 
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
                +V T+N +I+     G  D+A  LF+ +   G  P V+TY+++I++  + G  + 
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEE 711

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           + DL   ME+ G         ++I   +   D+ +A    + + +  FS +  T  +LI 
Sbjct: 712 SDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIP 771

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPND 490
            +  K   KE  K     + + ++P D
Sbjct: 772 IVSEKKYQKEV-KFLPEKYHSFMQPRD 797


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 229/498 (45%), Gaps = 41/498 (8%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y  I+DA L           +  M   G+ P   T+N LL  + K+   D       E
Sbjct: 147 KIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVE 206

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K  + D  S+  LI   C+ G + +A E+      M F+P+V +Y +LI+G CK   
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYT 261

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E A  L  ++   G+     +YT +I  L   G  +       KM   G SP+L+T+  
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +  +G   E    +D M    V  NVV YN L+ GLC +  + +A  + +QM++ G
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV-------------------- 385
             PNV TY+ LIDG+  AG+ D A  ++N + ++G  P+V                    
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 386 ---------------VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                          VT+N  I+    +G    A  +  +M   G  P+  TY  L+DS 
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           ++     +AF +   M+  G   ++ TY  +I+G C  G + EA +L   M     +P+ 
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +  N++I  YCK+G    A++L+  ++     P+I +Y+S I  +C      EA V L +
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 551 MLKLGLKPSVSLYNILYR 568
           ML  G+ P+V+ +N+L R
Sbjct: 622 MLSEGISPNVATWNVLVR 639



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 6/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
           L+ S+I ++ ++  S+QAL  F++M D  V+P    +N +L  ++    F     ++ + 
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E +V+++ IL+K  C+   ++ A ++L ++   G  P+ V YT+LI   CK G +
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ L      +    +   Y  LI G+ K    ++ F+  ++M   G+ P++ +Y  +
Sbjct: 233 KEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+   + G V     +  +M  R  + N+ T+ +LI G   +    EA    D+M   G+
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+ YN L+ G C       A  +FNQ++ NG  P+V TY+ LI  ++KAG+   AS+
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M   G  P+ V YT ++D   R+    +A+ +   MQ     P+  T+   I GLC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +  A K+F+ M  +   PN   YN ++    K+     A  L+ +M  +G+  N+ 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ I   C  G   EA  LL +M+  G KP     NI+  A
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 1/358 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y +II+A   +   + +L    +M   G  P  +TF SL+  F +K  S +    +    
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  +V ++  L+ G C    L  A  V NQ+E  G  PNV  Y++LIDG  K GD++
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  ++  +   G       YT ++  L +N +    +   E MQ+    P+  T+N  I
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V    K+FD+M +     N  TYN L+  L K+ R  EA  L+  M+  GI 
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N++TYN +I G+C AG   +A  L  ++   G  P  +T N++I A+ K G   +A  L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +  +      P  + YT LI        +E+A      M   G SP+V T+ VL+  L
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 186/411 (45%), Gaps = 31/411 (7%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           D+  A E    +     F    + Y  +I+      +++  + L +++   G+  ++  +
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             +I    + G  +   + + +MQ   V P++  YN ++    +E +      ++  M+ 
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG----------------------- 345
             +  NV TYN L+  LCK  RV  A +LL +M   G                       
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 346 -------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                   +P+V  YN LI+G C     ++AF+L +++ + G  P+V++Y  +I A S A
Sbjct: 235 ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDA 294

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           GN +++  ++ +M  RG +P+  T+T LI  F       +A + +  M + G  P+V  Y
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+HGLC K ++ +A  +FN M      PN   Y+ +I GY K G+   A  +   M  
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G  PN+ +Y+  + VLC++  + +A  L+  M      P+   +N   + 
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 36/269 (13%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R Y ++ID + K+   D A   ++ M+  G  P    +  ++  + ++  F++ +     
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + +    +  +F   IKG C +G ++ A +V +Q+   G  PN   Y  L+D   K+  
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              A  L + +   G+     TY  +I G    G+  +  E   KM + G  P   T N 
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566

Query: 286 LIHEYCNEGKVSEGFKLFDE-----------------------------------MRHRE 310
           +I  YC +GKV+   +L D                                    M    
Sbjct: 567 VIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG 626

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLD 339
           ++ NV T+N L+  L   M    A + LD
Sbjct: 627 ISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)

Query: 435 DMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D+  A E + S+     F     TY ++I  L  +  M     L   M    +  ++ ++
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I  Y + G+S +AL+    M +  + P +  Y+  +  L  + ++     + + M K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 554 LGLKPSVSLYNILYRA--KNN 572
            G++P+V  YNIL +A  KNN
Sbjct: 175 DGMEPNVFTYNILLKALCKNN 195


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 238/499 (47%), Gaps = 39/499 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y  IID   KS+  D+A     QM+++G RP S T+NSL+                    
Sbjct: 207 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 266

Query: 149 ----IFVIKSCSFDKGWLF----FSENRCKVE--------LDVYSFGILIKGCCEAGD-- 190
               I  + +C+     LF     +E +C  +         D+ S+  ++ G   A D  
Sbjct: 267 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 326

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L     + N +   G +PN  ++  LI+   + G +++A ++F  +   G++    T+  
Sbjct: 327 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 386

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L + G   D    +  M   GV PS   Y CLI   CN G++ +  +L  EM +++
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446

Query: 311 VACNVVTY-NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +    V Y +++I  LCKE RV E + ++D M   G  PNV+T+N L++G+C  G  ++A
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F L + + S G  P+   Y  L+  + K G    A  + R+M  +G+ P+ V Y+I++  
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++     A +M+  M +SG +  ++TYGV++ GLC      EA+ L   ++   ++ +
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N++I    K G    A  L   ++  GLVPNI +YS  I  L ++  + EA+ L  
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 686

Query: 550 QMLKLGLKPSVSLYNILYR 568
            + K G      L N + R
Sbjct: 687 SVEKSGHASDSRLLNHIVR 705



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 4/460 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           S+I   +K    D+A   F +M++ GV P+    NS++  + K    DK      +    
Sbjct: 139 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 198

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  D++++ ++I G C++  ++KA  VL Q+ E G  PN + Y SLI G   +G    +
Sbjct: 199 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 258

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +F+++   G++ T       I  LFK+G   +    ++ M L G  P + +Y+ ++H 
Sbjct: 259 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 318

Query: 290 Y--CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           Y    +  +++   +F+ M  + +A N   +N LI    +   + +A  + + M+  G+ 
Sbjct: 319 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 378

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +T+  +I   C  G  D A   FN +   G  PS   Y  LI+     G    A +L
Sbjct: 379 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 438

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM  + I P  V Y + +I++  +   + +  ++  +M ++G  P+V T+  L+ G C
Sbjct: 439 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 498

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + GNM+EA  L ++M    +EPN  +Y  ++ GYCK G    AL +  +M  KG+ P   
Sbjct: 499 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 558

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS  +  L Q  +   A+ + ++M++ G   S+  Y ++
Sbjct: 559 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 598



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 39/431 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +S+  LI G  + G+++KA  +  ++ E G  P ++I  S+I   CK  ++++A+ + 
Sbjct: 134 DDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 192

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ + G+     TY+++I GL K+          E+M   G  P+  TYN LIH Y   
Sbjct: 193 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 252

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G  +E  ++F +M    V   V   N+ I  L K  R  EA+ + D M + G  P++I+Y
Sbjct: 253 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 312

Query: 354 NKLIDGFCDAGET--DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + ++ G+  A ++       +FN + + G +P+   +N+LI A+++ G    A  +  +M
Sbjct: 313 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 372

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG------- 464
           + +G+ P  VT+  +I S  R   ++ A   ++ M   G  P    YG LI G       
Sbjct: 373 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 432

Query: 465 -----------------------------LCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                                        LC +G + E   + + M +T   PN V +N 
Sbjct: 433 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 492

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ GYC  GN   A  LL  M   G+ PN   Y + +   C++G+  +A  +   ML  G
Sbjct: 493 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 552

Query: 556 LKPSVSLYNIL 566
           +KP+  LY+I+
Sbjct: 553 VKPTSVLYSII 563



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 194/400 (48%), Gaps = 45/400 (11%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL---GLVATQHTYTVLICGLFKNGLQKDG 264
           P +  Y  LID C +   + R  +    +G L   GL     +Y+ LI G  K+G     
Sbjct: 98  PTIHTYNILID-CYRR--VHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA 153

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              + +M   GV P +   N +I E C   ++ +   +  +M    +A ++ TY+ +I G
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS------ 378
           LCK   + +AER+L+QM  AG  PN ITYN LI G+  +G  +++ R+F Q+ S      
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 379 -----------------------------NGQSPSVVTYNVLIRAFSKAGNSKMAS--DL 407
                                         G  P +++Y+ ++  ++ A +S +A   ++
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M  +GI P++  + ILI+++ R   M+KA  ++  MQ  G  PD  T+  +I  LC 
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIA 526
            G + +A   FN M +  + P++ VY  +I G C  G   +A  L+ EM  K +  P + 
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +SS I  LC++G+  E + +++ M++ G +P+V  +N L
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 493



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 207/441 (46%), Gaps = 10/441 (2%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F+ ML  G+ P  + FN L+    +    DK  L F + + K  + D  +F  +I   C 
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A    N + ++G  P+  +Y  LI GCC +G++ +AK L  ++    +      
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           Y + +I  L K G   +G +  + M   G  P++ T+N L+  YC  G + E F L D M
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 513

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  N   Y TL+ G CK  R+ +A  +   M   G+ P  + Y+ ++ G   A  T
Sbjct: 514 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 573

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A ++F+++  +G + S+ TY V++    +   +  A+ L+ ++    +    +T+ I+
Sbjct: 574 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 633

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  +    ++A E++  +   G  P++ TY ++I  L  + + +EA  LF S+ ++  
Sbjct: 634 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693

Query: 487 EPNDVVYNM---MIFGYCKEGNSYRALRLLGEMN---EKGLVPNIASYSSTIGVLCQDGK 540
             +  + N    M+    +   +   L ++GE N   E   +  +AS  S  G++   G 
Sbjct: 694 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI--KGL 751

Query: 541 WPEAEVLLNQMLKLGLKPSVS 561
           +  A      +L+L L  +VS
Sbjct: 752 FGTAPAPAPALLELELSQTVS 772



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 197/403 (48%), Gaps = 8/403 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++  +I+A+ +  + D+A+  F  M + G+ P + TF +++  + +    D     F+ 
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406

Query: 167 NRCKVELDVYS----FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-TSLIDGCC 221
               V++ V      +G LI+GCC  G+L KA E+++++      P  V Y +S+I+  C
Sbjct: 407 ---MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +   K +   + + G      T+  L+ G    G  ++ F   + M   G+ P+ Y
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 523

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+  YC  G++ +   +F +M H+ V    V Y+ ++ GL +  R   A+++  +M
Sbjct: 524 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 583

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G + ++ TY  ++ G C    TD+A  L  +L +      ++T+N++I A  K G  
Sbjct: 584 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 643

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A +L   +   G+ P+  TY+++I + ++ +  E+A  ++  ++KSG + D      +
Sbjct: 644 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 703

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
           +  L  K  + +AS   + + E  L       +++   + +EG
Sbjct: 704 VRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 746



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 2/352 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGI 180
           D AL  F+ M+D GV P    +  L+          K     SE  N+      V  F  
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+ G + +  ++++ + + G  PNVV + SL++G C  G++E A  L   +  +G
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    + Y  L+ G  KNG   D    +  M   GV P+   Y+ ++H      + +   
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F EM       ++ TY  ++ GLC+     EA  LL+++    +  ++IT+N +I   
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G   +A  LF+ + + G  P++ TY+++I    K  + + A +L   +E+ G     
Sbjct: 638 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 697

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
                ++   +   ++ KA    S++ ++  + +  T  +L      +G +K
Sbjct: 698 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P++ TYN+LI  + +     +   +V  + + G+ P + +Y+ LI  FV+  +++KA  +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M + G  P +     +I  LC    M +A  +   M ++ + P+   Y+++I G CK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                +A R+L +M E G  PN  +Y+S I      G W E+  +  QM   G+ P+V  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 563 YNILYRA 569
            N    A
Sbjct: 277 CNSFIHA 283


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 257/541 (47%), Gaps = 10/541 (1%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P  AFS FN     G  H P + + I+R+L     S       +++++II  +  +  F 
Sbjct: 73  PSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRK---LDSILMEIIK-KDGNLDFG 128

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
             +L   L     + S  V   ++ +++I   + S + DQA     Q    G  P+  + 
Sbjct: 129 IVNLFEALGDGIANESFSVL-VQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSC 187

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N L+  +++S   D     + + +   +  + Y++ I IKG C  G+L +A +V   +EE
Sbjct: 188 NFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEE 247

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G +PN   YT+ I+G C +G  +    + + +    +      YTV+I G       K+
Sbjct: 248 SGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKE 307

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                 +M+  G +P +Y Y  LI  YC  G + +   L DEM  + V  N V  ++++ 
Sbjct: 308 AESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQ 367

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GL +     E      + K  GI  +   YN ++D  C  G+ ++A  L  ++K     P
Sbjct: 368 GLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVP 427

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            ++ Y  +I  +   G    A ++ REM++ G  P  VTY +L   F R+   ++A  + 
Sbjct: 428 DIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLL 487

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M+  G  PD  T+ ++I GLC+ G + +A   F+++ E  LE     Y+ M+ GYC+ 
Sbjct: 488 NYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLEN----YSAMVNGYCEA 543

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
            +  +A  LL  ++++G +   AS+   +G LC +G   +A  LL  M+ L + P++ +Y
Sbjct: 544 NHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMY 603

Query: 564 N 564
           +
Sbjct: 604 S 604



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 213/426 (50%), Gaps = 28/426 (6%)

Query: 157 FDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
           F K  +FF E           + +++   C+ G + +A E+L +++     P+++ YT++
Sbjct: 385 FKKMGIFFDEA---------CYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           I G    G +  A  ++R++ ++G      TY VL  G  +NGL ++       M+  GV
Sbjct: 436 ISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGV 495

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P   T+N +I   C  GKV +    FD +  + +      Y+ ++ G C+   V +A  
Sbjct: 496 KPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFA 551

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LL ++   G      ++ KL+   C  G+++KA  L   + +   +P+++ Y+ +I A  
Sbjct: 552 LLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALF 611

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           +AG  + A  +   + +RG+ P  +TYTI+I+ + R + M++A+ +   M+  G  PDV 
Sbjct: 612 QAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVI 671

Query: 457 TYGVLIH---------------GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           TY VL++                +  K NM + S L++ M +  ++P+ + Y ++I  +C
Sbjct: 672 TYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHC 731

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
           K  N   A+ L  EM ++GL P+  +Y++ +   C  G   +A VL ++ML  G++P   
Sbjct: 732 KTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAH 791

Query: 562 LYNILY 567
             ++L+
Sbjct: 792 TMSVLH 797



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 251/597 (42%), Gaps = 85/597 (14%)

Query: 59  SSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
           + H   A Q L    +  R+  S     ++  +  QL     NP      Y   I    +
Sbjct: 175 TKHCGFAPQILSCNFLMNRLVESRKVDMAIAIY-RQLKAFGLNP--NDYTYTIAIKGFCR 231

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYS 177
                +A+  F  M +SGV P S ++ + +  +      D G+    +    K+ +DV++
Sbjct: 232 KGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFA 291

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML----- 232
           + ++I+G C    L +A  +L ++E+ GF+P+V +Y +LI G C  G++ +A  L     
Sbjct: 292 YTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMV 351

Query: 233 ------------------------------FRKIGELGLVATQHTYTVLICGLFKNGLQK 262
                                         F++  ++G+   +  Y V++  L K G  +
Sbjct: 352 SKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVE 411

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +  E   +M+   + P +  Y  +I  Y  +GKV +   ++ EM+      ++VTYN L 
Sbjct: 412 EAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLA 471

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD--------------- 367
            G  +    QEA  LL+ M+  G+ P+ +T+N +I+G C  G+ D               
Sbjct: 472 GGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE 531

Query: 368 ----------------KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
                           KAF L  +L   G+     ++  L+      G+S+ A  L+  M
Sbjct: 532 NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETM 591

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
               I P+ + Y+ +I +  ++ +MEKA  +++++   G +PDV TY ++I+G C    M
Sbjct: 592 VALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKM 651

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCK---------------EGNSYRALRLLGEM 516
           KEA  +   M    +EP+ + Y +++    K               + N      L  EM
Sbjct: 652 KEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEM 711

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
            +  + P++  Y+  I   C+     +A  L N+M+  GL P    Y  L     N+
Sbjct: 712 KDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNV 768



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 22/328 (6%)

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYC-----------------NEGKVSEGF-----K 301
            F ++ +++ +G S   YTY  ++   C                  +G +  G       
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L D + +   +  V   + LI          +A  +L Q K  G +P +++ N L++   
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           ++ + D A  ++ QLK+ G +P+  TY + I+ F + GN   A D+ R+MEE G+TP+  
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +YT  I+        +  F++   +  +    DV+ Y V+I G C +  +KEA  +   M
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +    P+  VY  +I GYC  GN  +AL L  EM  KG+  N    SS +  L Q G  
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            E      +  K+G+    + YN++  A
Sbjct: 376 SEVANQFKEFKKMGIFFDEACYNVVMDA 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 106/271 (39%), Gaps = 63/271 (23%)

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           VIT N L        E   AF  FNQLK +G S    TY  ++R     G S+    ++ 
Sbjct: 63  VITLNNL------RNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILM 116

Query: 410 EM---------------EERGITPSEVTYTILI--------------------------- 427
           E+               E  G   +  ++++L+                           
Sbjct: 117 EIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTK 176

Query: 428 ---------------DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
                          +  V S  ++ A  +Y  ++  G +P+ YTY + I G C KGN+ 
Sbjct: 177 HCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLA 236

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  +F  M E+ + PN   Y   I G C  G S    ++L ++    +  ++ +Y+  I
Sbjct: 237 EAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVI 296

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
              C + K  EAE +L +M K G  P V +Y
Sbjct: 297 RGFCSEMKLKEAESILREMEKQGFAPDVYVY 327



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 53/287 (18%)

Query: 54  LLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESII 113
           LL ++S       +    K++ G + S   + ++L C L  +   + NP     +Y  +I
Sbjct: 552 LLIRLSKQGRILKKASFFKLL-GNLCSEGDSEKAL-CLLETMVALNINPTM--IMYSKVI 607

Query: 114 DAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL 173
            A  ++   ++A + F+ ++D G+ P                                  
Sbjct: 608 GALFQAGEMEKAQYVFNMLVDRGLAP---------------------------------- 633

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG--------D 225
           DV ++ I+I G C    + +A+ VL  ++  G  P+V+ YT L++ C K          D
Sbjct: 634 DVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLD 693

Query: 226 IERAK-------MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
             ++K        L+ ++ ++ +      YTVLI    K    +D    + +M   G++P
Sbjct: 694 AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP 753

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
              TY  L+  YCN G + +   LFDEM ++ +  +  T + L C L
Sbjct: 754 DTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVLHCIL 800


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 243/536 (45%), Gaps = 59/536 (11%)

Query: 42  HTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSN 101
           HTP + ++ L  L   ++S  +A    LI +       S +FTP SL   L  L      
Sbjct: 45  HTPSAATLSLLRLSPGLASELYA----LIAE------PSHAFTPASL-ASLHSLAARHRI 93

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   + L   ++     S  ++ A F    +      P  + FNSLL  + ++ +  +G 
Sbjct: 94  PPPSALLLSKLVRRF--SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNL-RGM 150

Query: 162 --LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--FSPNVVIYTSLI 217
             LF S     V+ DV ++GIL+ G C++G +  A +VL+++   G    P++ I  +++
Sbjct: 151 TELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVV 210

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-LNGV 276
           DG CK G +++A +                                     E+M+ ++G 
Sbjct: 211 DGLCKIGRLQQAIIFVD----------------------------------ERMRHVHGC 236

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           +P+  TYNCL   +C  G +    K+   M    VA NV+T NT+I GLC+  RV  A  
Sbjct: 237 APNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALE 296

Query: 337 LLDQMKMAGISP----NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
              + +   + P    N +TY+ L   F      D A  LF+++  +G  P  V Y  +I
Sbjct: 297 FFREKRT--VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMI 354

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
              ++AG    A      M++ G       Y ILI  F R   + +A+E+   M+  G  
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQ 414

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           PDVYTY  L+ GLC  G+     +L   M +   +P+ V +  ++ GYCK G +  ALR+
Sbjct: 415 PDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
              M+E  + PN   Y++ I  LC+  +   A  L ++M +  +  +V+ YN L +
Sbjct: 475 FRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLK 530



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 220/494 (44%), Gaps = 22/494 (4%)

Query: 25  PLKAFSLFNWASRQGL---QHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSS 81
           P  AF+  + AS   L      P   +++L  L+ + SS + AA   L   + SG     
Sbjct: 72  PSHAFTPASLASLHSLAARHRIPPPSALLLSKLVRRFSSPAEAAG-FLRDSLASGAPAPD 130

Query: 82  SFTPRSLLCHL---------TQLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFH 130
                SLL  L         T+LF S  +   K  +  Y  +++   KS     AL    
Sbjct: 131 ISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLD 190

Query: 131 QMLDSG--VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE---LDVYSFGILIKGC 185
           +M   G  V P     N+++  + K     +  +F  E    V     +  ++  L    
Sbjct: 191 RMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAF 250

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  GD+  A +++ ++E+ G +PNV+   ++I G C+ G +  A   FR+   +   A  
Sbjct: 251 CRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG 310

Query: 246 H--TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
           +  TY+ L              E + +M  +G  P    Y  +I      G++ +     
Sbjct: 311 NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTA 370

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M+      +   YN LI G C++ ++ EA  LL++MK  G+ P+V TYN L+ G C A
Sbjct: 371 ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKA 430

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+      L   +  +G  PSVVT+  L+  + KAG +  A  + R M+E  I P+ V Y
Sbjct: 431 GDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIY 490

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             LID   +S +++ A +++  M++     +V TY  L+ GL  K   ++A +L + M E
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550

Query: 484 TKLEPNDVVYNMMI 497
            +  PN V  ++++
Sbjct: 551 ERCTPNYVTVDVLM 564


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 238/499 (47%), Gaps = 39/499 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y  IID   KS+  D+A     QM+++G RP S T+NSL+                    
Sbjct: 283 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 342

Query: 149 ----IFVIKSCSFDKGWLF----FSENRCKVE--------LDVYSFGILIKGCCEAGD-- 190
               I  + +C+     LF     +E +C  +         D+ S+  ++ G   A D  
Sbjct: 343 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 402

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L     + N +   G +PN  ++  LI+   + G +++A ++F  +   G++    T+  
Sbjct: 403 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 462

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           +I  L + G   D    +  M   GV PS   Y CLI   CN G++ +  +L  EM +++
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522

Query: 311 VACNVVTY-NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +    V Y +++I  LCKE RV E + ++D M   G  PNV+T+N L++G+C  G  ++A
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           F L + + S G  P+   Y  L+  + K G    A  + R+M  +G+ P+ V Y+I++  
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
             ++     A +M+  M +SG +  ++TYGV++ GLC      EA+ L   ++   ++ +
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + +N++I    K G    A  L   ++  GLVPNI +YS  I  L ++  + EA+ L  
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 762

Query: 550 QMLKLGLKPSVSLYNILYR 568
            + K G      L N + R
Sbjct: 763 SVEKSGHASDSRLLNHIVR 781



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 4/460 (0%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RC 169
           S+I   +K    D+A   F +M++ GV P+    NS++  + K    DK      +    
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            +  D++++ ++I G C++  ++KA  VL Q+ E G  PN + Y SLI G   +G    +
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             +F+++   G++ T       I  LFK+G   +    ++ M L G  P + +Y+ ++H 
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 290 Y--CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           Y    +  +++   +F+ M  + +A N   +N LI    +   + +A  + + M+  G+ 
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 454

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +T+  +I   C  G  D A   FN +   G  PS   Y  LI+     G    A +L
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 514

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM  + I P  V Y + +I++  +   + +  ++  +M ++G  P+V T+  L+ G C
Sbjct: 515 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 574

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + GNM+EA  L ++M    +EPN  +Y  ++ GYCK G    AL +  +M  KG+ P   
Sbjct: 575 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 634

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            YS  +  L Q  +   A+ + ++M++ G   S+  Y ++
Sbjct: 635 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 674



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 39/431 (9%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +S+  LI G  + G+++KA  +  ++ E G  P ++I  S+I   CK  ++++A+ + 
Sbjct: 210 DDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 268

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           +K+ + G+     TY+++I GL K+          E+M   G  P+  TYN LIH Y   
Sbjct: 269 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 328

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G  +E  ++F +M    V   V   N+ I  L K  R  EA+ + D M + G  P++I+Y
Sbjct: 329 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 388

Query: 354 NKLIDGFCDAGET--DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           + ++ G+  A ++       +FN + + G +P+   +N+LI A+++ G    A  +  +M
Sbjct: 389 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 448

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG------- 464
           + +G+ P  VT+  +I S  R   ++ A   ++ M   G  P    YG LI G       
Sbjct: 449 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 508

Query: 465 -----------------------------LCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
                                        LC +G + E   + + M +T   PN V +N 
Sbjct: 509 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 568

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           ++ GYC  GN   A  LL  M   G+ PN   Y + +   C++G+  +A  +   ML  G
Sbjct: 569 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 628

Query: 556 LKPSVSLYNIL 566
           +KP+  LY+I+
Sbjct: 629 VKPTSVLYSII 639



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 194/400 (48%), Gaps = 45/400 (11%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL---GLVATQHTYTVLICGLFKNGLQKDG 264
           P +  Y  LID C +   + R  +    +G L   GL     +Y+ LI G  K+G     
Sbjct: 174 PTIHTYNILID-CYRR--VHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKA 229

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              + +M   GV P +   N +I E C   ++ +   +  +M    +A ++ TY+ +I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS------ 378
           LCK   + +AER+L+QM  AG  PN ITYN LI G+  +G  +++ R+F Q+ S      
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 379 -----------------------------NGQSPSVVTYNVLIRAFSKAGNSKMAS--DL 407
                                         G  P +++Y+ ++  ++ A +S +A   ++
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 409

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M  +GI P++  + ILI+++ R   M+KA  ++  MQ  G  PD  T+  +I  LC 
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL-VPNIA 526
            G + +A   FN M +  + P++ VY  +I G C  G   +A  L+ EM  K +  P + 
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +SS I  LC++G+  E + +++ M++ G +P+V  +N L
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 569



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 198/422 (46%), Gaps = 2/422 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
           F+ ML  G+ P  + FN L+    +    DK  L F + + K  + D  +F  +I   C 
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G L+ A    N + ++G  P+  +Y  LI GCC +G++ +AK L  ++    +      
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529

Query: 248 Y-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           Y + +I  L K G   +G +  + M   G  P++ T+N L+  YC  G + E F L D M
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 589

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               +  N   Y TL+ G CK  R+ +A  +   M   G+ P  + Y+ ++ G   A  T
Sbjct: 590 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 649

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A ++F+++  +G + S+ TY V++    +   +  A+ L+ ++    +    +T+ I+
Sbjct: 650 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 709

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  +    ++A E++  +   G  P++ TY ++I  L  + + +EA  LF S+ ++  
Sbjct: 710 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
             +  + N ++     +    +A   L  + E  L    ++ S    +  ++GK+ E   
Sbjct: 770 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIK 829

Query: 547 LL 548
           LL
Sbjct: 830 LL 831



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
            ++  +I+A+ +  + D+A+  F  M + G+ P + TF +++  + +    D     F+ 
Sbjct: 423 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 482

Query: 167 NRCKVELDVYS----FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-TSLIDGCC 221
               V++ V      +G LI+GCC  G+L KA E+++++      P  V Y +S+I+  C
Sbjct: 483 ---MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +   K +   + + G      T+  L+ G    G  ++ F   + M   G+ P+ Y
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  L+  YC  G++ +   +F +M H+ V    V Y+ ++ GL +  R   A+++  +M
Sbjct: 600 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 659

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             +G + ++ TY  ++ G C    TD+A  L  +L +      ++T+N++I A  K G  
Sbjct: 660 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 719

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A +L   +   G+ P+  TY+++I + ++ +  E+A  ++  ++KSG + D      +
Sbjct: 720 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 779

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
           +  L  K  + +AS   + + E  L       +++   + +EG     ++LL
Sbjct: 780 VRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 163/363 (44%), Gaps = 2/363 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGI 180
           D AL  F+ M+D GV P    +  L+          K     SE  N+      V  F  
Sbjct: 474 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 533

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +I   C+ G + +  ++++ + + G  PNVV + SL++G C  G++E A  L   +  +G
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    + Y  L+ G  KNG   D    +  M   GV P+   Y+ ++H      + +   
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K+F EM       ++ TY  ++ GLC+     EA  LL+++    +  ++IT+N +I   
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G   +A  LF+ + + G  P++ TY+++I    K  + + A +L   +E+ G     
Sbjct: 714 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 773

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
                ++   +   ++ KA    S++ ++  + +  T  +L      +G  +E  KL  +
Sbjct: 774 RLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 833

Query: 481 MWE 483
            ++
Sbjct: 834 KYQ 836



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P++ TYN+LI  + +     +   +V  + + G+ P + +Y+ LI  FV+  +++KA  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           +  M + G  P +     +I  LC    M +A  +   M ++ + P+   Y+++I G CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
                +A R+L +M E G  PN  +Y+S I      G W E+  +  QM   G+ P+V  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 563 YNILYRA 569
            N    A
Sbjct: 353 CNSFIHA 359


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 237/506 (46%), Gaps = 36/506 (7%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S P      + ++I+ + K    D+A   ++ M++ G+ P    ++ L+  + ++   ++
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT---- 214
           G   FS    + V++DV  F  ++      GDL KA EV  ++ + G SPNVV Y+    
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388

Query: 215 -------------------------------SLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                                          SLIDG CK+ ++     L+  +   G V 
Sbjct: 389 GLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVP 448

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                ++LI GL + G+  +   F+ +    G++ + Y +N LI       +  +G K++
Sbjct: 449 DVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY 508

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M   +V  +VVTY  L+ GL ++ R+ EA  L  Q+   G SP+ I Y  LIDGFC  
Sbjct: 509 ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            +     ++F  ++SNG  P +  YNVLI  F + G  +   +L+RE+ + G+ P  VTY
Sbjct: 569 RDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +I  +       KA +++ +++     P+  T+ +LI   C  G M +A  +F+SM E
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
              EPN + Y+ +I GY K  N+  A  L  +M    + PNI SYS  I  LC+ G   E
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A +     +   L P V  Y IL R 
Sbjct: 749 ASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 255/577 (44%), Gaps = 49/577 (8%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A   F WA    GL H  QS   I  +LL     H      T +   + G+     F
Sbjct: 69  PTSALRFFEWAENFLGLCHPVQSFCGIAHVLLR----HRMFDPATRVFDRMVGQ-----F 119

Query: 84  TPRSLLCHLTQLFPS-SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
               +L      F +  SNP   S +Y  ++  + ++ + D+A+  F  M   GV     
Sbjct: 120 GNLEVLGEFHGSFRNYGSNP---STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHY 176

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI---------------------- 180
             + +L  +I S   D   L   E  CK  L VY F                        
Sbjct: 177 AASEMLDLLIDSDRIDV-ILENYEEMCK-GLGVYEFVFNSFLKRGEVEKGLNFHRALVER 234

Query: 181 -----------LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                      ++KG C    +  A +  + +   G SPN+V +++LI+  CK   ++ A
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L+  + E G+V     Y++LI GLF+ G  ++G   +      GV   +  ++ ++  
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           Y   G + +  +++  M    ++ NVVTY+ LI GLC+  RV EA  +  Q+   G+ P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY+ LIDGFC +      F L+  +   G  P VV  ++LI   S+ G    A     
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +  +RG+T +   +  LID   R        +MY LM      PDV TY VL+ GL  +G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA  LF  + +    P+ ++Y  +I G+CK+ +    L++   M   G+ P+I  Y+
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             I +  ++G       LL +++K GL+P +  YN +
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 219/453 (48%), Gaps = 36/453 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++ SI+DA+++     +A+  + +ML  G+ P   T++ L+  + ++    +    F + 
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E  V ++  LI G C++ +L   F +   +   G  P+VV+ + LI+G  + G +
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A   F +  + GL    + +  LI G F+    +DG + Y  M +  V P + TY  L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK------------------- 327
           +     +G++ E   LF ++  +  + + + Y TLI G CK                   
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586

Query: 328 ----------------EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                           E  V+    LL ++   G+ P+++TYN +I G+C      KA +
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF  LK     P+ +T+ +LI A+ K G    A  +   M ERG  P+ +TY+ LID + 
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++++ E AFE+Y  M     SP++ +Y +LI GLC KG M+EAS  F       L P+ +
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVI 766

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            Y ++I GYCK G    A+ L   M   G++P+
Sbjct: 767 AYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 222/442 (50%), Gaps = 5/442 (1%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKG 184
           +F  M+ SG  P   TF++L+    K    D+ +  ++   E     +L +YS  ILI G
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS--ILING 319

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
              AG L +   + +     G   +VVI++S++D   + GD+ +A  ++ ++ + G+   
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY++LI GL +NG   +    + ++   G+ PS+ TY+ LI  +C    + +GF L+ 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M  +    +VV  + LI GL ++  + EA R   Q    G++ N   +N LIDG     
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
            T    +++  +      P VVTY VL++  ++ G    A  L  ++ ++G +P  + Y 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID F +  D     +++ LMQ +G  PD+  Y VLI+    +G ++   +L   + + 
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            LEP+ V YN MI GYC      +A++L   +      PN  +++  I   C+DG+  +A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
            ++ + ML+ G +P++  Y+ L
Sbjct: 680 MLIFSSMLERGPEPNILTYSCL 701



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 182/385 (47%), Gaps = 1/385 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y S+ID   KS         +  ML  G  P     + L+  + +    D+    FF   
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  + L+ Y F  LI GC          ++   +      P+VV YT L+ G  + G ++
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ + G       Y  LI G  K      G + ++ MQ NG+ P +  YN LI
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +  EG V    +L  E+    +  ++VTYNT+ICG C      +A +L + +K     
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ 657

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN IT+  LID +C  G  D A  +F+ +   G  P+++TY+ LI  + K  N++ A +L
Sbjct: 658 PNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFEL 717

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M    ++P+ V+Y+ILID   +   ME+A   +         PDV  YG+LI G C 
Sbjct: 718 YEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCK 777

Query: 468 KGNMKEASKLFNSMWETKLEPNDVV 492
            G + EA  L++ M    + P+D++
Sbjct: 778 VGRLAEAMMLYDHMLVNGIMPDDLL 802



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P+ + Y+ L+  +C  G  D+A   F  +   G S S    + ++     +    + 
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +   EM  +G+      Y  + +SF++  ++EK    +  + + G  P +     ++ G
Sbjct: 195 LENYEEMC-KGLG----VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LCM   +  AS  F+ M  +   PN V ++ +I  YCKE     A  L   M EKG+VP+
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  YS  I  L + GK  E   L +  L  G+K  V +++ +  A
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 228/478 (47%), Gaps = 16/478 (3%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           NP+   + + ++    +K +    A+         GV+P  +T   L I +   C     
Sbjct: 2   NPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHT---LTIVINCLCHLKHT 58

Query: 161 WLFFS----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
              FS      +  VE  V +F  LI G C  G++  A    + LE+MG+  N   + ++
Sbjct: 59  VFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTI 118

Query: 217 IDGCCKNGDIERAKMLFRKI-----GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           I+G CK GD   A     KI     G   L+A    Y+ ++  L K+G+      F+  M
Sbjct: 119 INGLCKVGDTAGAISYLEKIEGRNRGFDLLIA----YSTIMDSLCKDGMLCLALNFFSGM 174

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
              G+ P L  YN LIH  C+ G+ +E   L   M  + +  NV T+N L+   CKE ++
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             A+ ++  M   G+ P+V+TYN +I G C   + + A ++F  +   G  P+VVTY+ L
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSL 294

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I  + K  N   A  ++ EM   G+    VT++ LI  F ++   E A E++  M +   
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQ 354

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
            P++ T  +++ GL       EA  LF  M +  LE N V YN+++ G C  G    A  
Sbjct: 355 LPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARE 414

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L   +  KG+  ++ +Y++ I  LC++G   +AE LL +M + G  P+   YN+L R 
Sbjct: 415 LFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRG 472



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 173/360 (48%), Gaps = 36/360 (10%)

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           FFS   CK ++ D+ ++  LI G C  G  N+A  +L  +   G  PNV  +  L+D  C
Sbjct: 170 FFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFC 229

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G I RAK             T   + V +                      GV P + 
Sbjct: 230 KEGKISRAK-------------TIMCFMVHV----------------------GVEPDVV 254

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN +I  +C   ++++  K+F+ M H+ +  NVVTY++LI G CK   + +A  +LD+M
Sbjct: 255 TYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEM 314

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G++ +V+T++ LI GFC AG  + A  LF  +  + Q P++ T  +++    K    
Sbjct: 315 VNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFH 374

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A  L R+ME+  +  + VTY I++D          A E++S +   G   DV  Y  +
Sbjct: 375 SEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTM 434

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I GLC +G + +A  L   M E    PN+  YN+++ G  +  +  R+ + L  M  KGL
Sbjct: 435 IKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGL 494



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 17/331 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-EN 167
           Y S+I         ++A      M+  G+ P   TFN L+    K     +         
Sbjct: 186 YNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMV 245

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              VE DV ++  +I G C    +N A +V   +   G  PNVV Y+SLI G CK  +I 
Sbjct: 246 HVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNIN 305

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT----- 282
           +A  +  ++   GL     T++ LI G  K G  +   E +  M  +   P+L T     
Sbjct: 306 KAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIIL 365

Query: 283 ---YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
              + C  H        SE   LF +M    +  N+VTYN ++ G+C   +  +A  L  
Sbjct: 366 DGLFKCQFH--------SEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFS 417

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            +   GI  +V+ Y  +I G C  G  D A  L  +++ NG  P+  TYNVL+R   +  
Sbjct: 418 CLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRY 477

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +   ++  +  M+ +G++    T  +LI  F
Sbjct: 478 DISRSTKYLMLMKGKGLSADATTTELLISYF 508



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 21/276 (7%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-----------DVYSFGI 180
           M+  GV P   T+NS++           G    S+    V++           +V ++  
Sbjct: 244 MVHVGVEPDVVTYNSVI----------SGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSS 293

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C+  ++NKA  VL+++   G + +VV +++LI G CK G  E A  LF  + E  
Sbjct: 294 LIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
            +    T  +++ GLFK     +    + KM+   +  ++ TYN ++   C+ GK ++  
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +LF  +  + +  +VV Y T+I GLCKE  + +AE LL +M+  G  PN  TYN L+ G 
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
               +  ++ +    +K  G S    T  +LI  FS
Sbjct: 474 LQRYDISRSTKYLMLMKGKGLSADATTTELLISYFS 509


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 6/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
           L+ S+I ++ ++  S+QAL  F++M D  V+P    +N +L  ++    F     ++ + 
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E +V+++ IL+K  C+   ++ A ++L ++   G  P+ V YT+LI   CK G +
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ L      +    +   Y  LI G+ K    ++ F+  ++M   G+ P++ +Y  +
Sbjct: 233 KEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+   + G V     +  +M  R  + N+ T+ +LI G   +    EA    D+M   G+
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+ YN L+ G C       A  +FNQ++ NG  P+V TY+ LI  ++KAG+   AS+
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +   M   G  P+ V YT ++D   R+    +A+ +   MQ     P+  T+   I GLC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G +  A K+F+ M  +   PN   YN ++    K+     A  L+ +M  +G+  N+ 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ I   C  G   EA  LL +M+  G KP     NI+  A
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 229/498 (45%), Gaps = 41/498 (8%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y  I+DA L           +  M   G+ P   T+N LL  + K+   D       E
Sbjct: 147 KIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVE 206

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K  + D  S+  LI   C+ G + +A E+      M F+P+V +Y +LI+G CK   
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYT 261

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            E A  L  ++   G+     +YT +I  L   G  +       KM   G SP+L+T+  
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI  +  +G   E    +D M    V  NVV YN L+ GLC +  + +A  + +QM++ G
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV-------------------- 385
             PNV TY+ LIDG+  AG+ D A  ++N + ++G  P+V                    
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 386 ---------------VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                          VT+N  I+    +G    A  +  +M   G  P+  TY  L+DS 
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
           ++     +AF +   M+  G   ++ TY  +I+G C  G + EA +L   M     +P+ 
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           +  N++I  YCK+G    A++L+  ++     P+I +Y+S I  +C      EA V L +
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 551 MLKLGLKPSVSLYNILYR 568
           ML  G+ P+V+ +N+L R
Sbjct: 622 MLSEGISPNVATWNVLVR 639



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 1/358 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y +II+A   +   + +L    +M   G  P  +TF SL+  F +K  S +    +    
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  +V ++  L+ G C    L  A  V NQ+E  G  PNV  Y++LIDG  K GD++
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  ++  +   G       YT ++  L +N +    +   E MQ+    P+  T+N  I
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G+V    K+FD+M +     N  TYN L+  L K+ R  EA  L+  M+  GI 
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N++TYN +I G+C AG   +A  L  ++   G  P  +T N++I A+ K G   +A  L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +  +      P  + YT LI        +E+A      M   G SP+V T+ VL+  L
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 186/411 (45%), Gaps = 31/411 (7%)

Query: 190 DLNKAFEVLNQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           D+  A E    +     F    + Y  +I+      +++  + L +++   G+  ++  +
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             +I    + G  +   + + +MQ   V P++  YN ++    +E +      ++  M+ 
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG----------------------- 345
             +  NV TYN L+  LCK  RV  A +LL +M   G                       
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 346 -------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
                   +P+V  YN LI+G C     ++AF+L +++ + G  P+V++Y  +I A S A
Sbjct: 235 ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDA 294

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           GN +++  ++ +M  RG +P+  T+T LI  F       +A + +  M + G  P+V  Y
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             L+HGLC K ++ +A  +FN M      PN   Y+ +I GY K G+   A  +   M  
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G  PN+ +Y+  + VLC++  + +A  L+  M      P+   +N   + 
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 169/366 (46%), Gaps = 7/366 (1%)

Query: 89  LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
           L  L ++F    +P   +  + S+I        S +AL ++ +M+  GV P    +N+L+
Sbjct: 301 LAVLAKMFARGCSPNLHT--FTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 149 IFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
             +    S       F++   N C   +  YS   LI G  +AGDL+ A EV N +   G
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYS--ALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
             PNVV YT ++D  C+N    +A  L   +          T+   I GL  +G      
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           + +++M  +G  P+  TYN L+     + +  E F L  +M HR +  N+VTYNT+I G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C    + EA  LL +M + G  P+ IT N +ID +C  G+ + A +L ++L +    P +
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           + Y  LI         + A   +R M   GI+P+  T+ +L+     +     A +    
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656

Query: 446 MQKSGF 451
           +  SGF
Sbjct: 657 VLGSGF 662



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)

Query: 435 DMEKAFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           D+  A E + S+     F     TY ++I  L  +  M     L   M    +  ++ ++
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I  Y + G+S +AL+    M +  + P +  Y+  +  L  + ++     + + M K
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 554 LGLKPSVSLYNILYRA--KNN 572
            G++P+V  YNIL +A  KNN
Sbjct: 175 DGMEPNVFTYNILLKALCKNN 195


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 192/393 (48%), Gaps = 41/393 (10%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           YS+ ILI G C+ G + KA +++ ++ +    P++V Y+SL DG CK+G  E +  +F  
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHN 418

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKD---GFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           +G  G      +Y  LI G     LQ+D     +   +M++NG  P+ +T+N LIH +C 
Sbjct: 419 LGAEGYKHDVISYNTLINGFV---LQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 293 -----------------------------------EGKVSEGFKLFDEMRHREVACNVVT 317
                                              EG   E  KL +E++   +  N  T
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           YN +I  LCKE + ++A  +L  M    + P  I YN LIDG+       KA  L+ ++ 
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  PS+VTY +LI  FS     + A  L +EM ++G+ P E+ +T +I  F +  DM+
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMK 655

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            A+ +Y  M + G SP+V TY  LI G      M +A  LFN M    + P+ + Y  +I
Sbjct: 656 SAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           FGY   G S R   +  EM E G+ PN  +Y++
Sbjct: 716 FGYQSLGYSDRVREMFNEMKENGVFPNYTAYAT 748



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 215/423 (50%), Gaps = 5/423 (1%)

Query: 149 IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
           +F   +   D   +F    R  +EL++ S   L+    EA        +  +L++ G SP
Sbjct: 187 VFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSP 246

Query: 209 NVVIYTSLIDGCCK-----NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           NV  YT +++  CK     N DI +A  +  ++   G   T  TY   I GL + G  + 
Sbjct: 247 NVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEF 306

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                  +++     + Y YN +IHE+C  G++ E F+L ++MR   ++    +Y+ LI 
Sbjct: 307 ALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILID 366

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK+ +V++A  L+++M  + + P+++TY+ L DG C +G T+ +  +F+ L + G   
Sbjct: 367 GLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKH 426

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
            V++YN LI  F    +   A  LV EM   G  P+  T+  LI  F +   ++KA E++
Sbjct: 427 DVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVF 486

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           ++M K G   +++T  ++      +G+  EA KL N + +  + PN   YN++I   CKE
Sbjct: 487 TIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKE 546

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
             + +A  +L  M +  + P    Y++ I    +     +A +L  +MLK+G+ PS+  Y
Sbjct: 547 QKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY 606

Query: 564 NIL 566
            +L
Sbjct: 607 TML 609



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 199/394 (50%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           L+ Y +  +I   C  G+L++AFE+L  +   G SP    Y+ LIDG CK G +E+A  L
Sbjct: 321 LNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDL 380

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             ++ +  +  +  TY+ L  GL K+GL +     +  +   G    + +YN LI+ +  
Sbjct: 381 IEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVL 440

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
           +  +    KL  EMR      N  T+N LI G CK  R+ +A  +   M   G+  N+ T
Sbjct: 441 QRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFT 500

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
            N + D F   G   +A +L N+++  G  P+  TYN++I+   K   ++ A +++  M 
Sbjct: 501 CNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVML 560

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           +  + P  + Y  LID + +  +  KA  +Y+ M K G  P + TY +LI+    +  M+
Sbjct: 561 KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQ 620

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  LF  M +  L P+++++  +I G+CK G+   A  L  EM++ G  PN+ +Y+  I
Sbjct: 621 EAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLI 680

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +  +  +A+ L N+M +  + P    Y  L
Sbjct: 681 DGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTAL 714



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 201/390 (51%), Gaps = 5/390 (1%)

Query: 174 DVYSFGILIKGCCEAG-----DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           +V+++ I++   C+       D+ KA EVL ++E  G SP VV Y + I G C+ G +E 
Sbjct: 247 NVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEF 306

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  L R +         + Y  +I    +NG   + FE  E M+ +G+SP+ Y+Y+ LI 
Sbjct: 307 ALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILID 366

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C +G+V +   L +EM    V  ++VTY++L  GLCK    + +  +   +   G   
Sbjct: 367 GLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKH 426

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +VI+YN LI+GF    +   A +L ++++ NG  P+  T+N LI  F K      A ++ 
Sbjct: 427 DVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVF 486

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M + G+  +  T  I+ D F R     +A ++ + +Q  G  P+ YTY ++I  LC +
Sbjct: 487 TIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKE 546

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
              ++A ++   M +  + P  + YN +I GY K+ N  +AL L  +M + G+ P+I +Y
Sbjct: 547 QKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY 606

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           +  I +     K  EA  L  +M+K GL P
Sbjct: 607 TMLINMFSNRSKMQEAYYLFKEMIKKGLVP 636



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 207/445 (46%), Gaps = 8/445 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELD-------VYSFGIL 181
           F ++ DSG  P   T+  ++ +  K  SF K            E++       V ++G  
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKG-SFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C AG +  A  ++  L       N   Y ++I   C+NG++  A  L   +   G+
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             T ++Y++LI GL K G  +   +  E+M  + V PSL TY+ L    C  G       
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F  +       +V++YNTLI G   +  +  A +L+ +M+M G  PN  T+N+LI GFC
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                DKA  +F  +   G   ++ T N++   F++ G+   A  L+ E+++ GI P+  
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY I+I    +    EKA+E+  +M K+   P    Y  LI G   + N  +A  L+  M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +  + P+ V Y M+I  +        A  L  EM +KGLVP+   ++  I   C+ G  
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L  +M + G  P+V  Y  L
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCL 679



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 173/392 (44%), Gaps = 75/392 (19%)

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           VLI    +N +  D  + + + +  G+  ++ + N L++ +    +      LF+E++  
Sbjct: 183 VLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDS 242

Query: 310 EVACNVVTYNTLICGLC-----KEMRVQEAERLLDQMKMAGISPNVIT------------ 352
             + NV TY  ++   C     K + + +A  +L++M+M G SP V+T            
Sbjct: 243 GPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAG 302

Query: 353 -----------------------YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
                                  YN +I  FC  GE  +AF L   ++S+G SP+  +Y+
Sbjct: 303 CVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYS 362

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           +LI    K G  + A DL+ EM +  + PS VTY+ L D   +S   E +  M+  +   
Sbjct: 363 ILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAE 422

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK------- 502
           G+  DV +Y  LI+G  ++ +M  A KL + M      PN   +N +I G+CK       
Sbjct: 423 GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKA 482

Query: 503 ----------------------------EGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
                                       EG+ + AL+L+ E+ + G+VPN  +Y+  I  
Sbjct: 483 LEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKW 542

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC++ K  +A  +L  MLK  + P    YN L
Sbjct: 543 LCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTL 574



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 27/327 (8%)

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEG---------------------KVSEGFK-LFD 304
           F++ +  +G S S+Y +  +IH   + G                      VSE F  L D
Sbjct: 108 FFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLD 167

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
             +   +  +++  N LI    +   + +A  +  Q +  G+  N+++ N L++ F +A 
Sbjct: 168 SPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEAN 227

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK-----MASDLVREMEERGITPS 419
           +T+    LF +LK +G SP+V TY +++  + K    K      A++++ EME  G +P+
Sbjct: 228 QTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPT 287

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VTY   I    R+  +E A  +   ++      + Y Y  +IH  C  G + EA +L  
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M    + P    Y+++I G CK+G   +AL L+ EM +  + P++ +YSS    LC+ G
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
               +  + + +   G K  V  YN L
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTL 434


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 237/523 (45%), Gaps = 29/523 (5%)

Query: 68  TLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALF 127
            L  ++ISG + +S F       H  +      N VT    Y +++   LK +       
Sbjct: 272 VLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVT----YRTLLTGFLKKKQLGWCKR 327

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCC 186
             + M+  G  P  + FNSL+     +  +   +  F+  N C        + I I   C
Sbjct: 328 IINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC 387

Query: 187 EAGDLNKAFEVLN----QLEEMGFSPNVV--IYTSLIDGC-CKNGDIERAKMLFRKIGEL 239
              +L    E+L+      EEM  +  V+  I T+    C C  G  E+A  + +++   
Sbjct: 388 GREELPNP-ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V    TYT +I  L +       F  +++M+  GV+P +YTY  LI  +C  G + + 
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA 506

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
              FDEMR    + NVVTY  L+    K  ++ +A  +  +M      PN ITY+ LIDG
Sbjct: 507 QSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDG 566

Query: 360 FCDAGETDKAFRLFNQL----------------KSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            C AGE  KA  ++ +L                 ++  SP+VVTY  L+    KA     
Sbjct: 567 LCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSD 626

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A DL+  M   G  P+++ Y  L+D F +  +++ A E++  M K G+ P V+TY  LI 
Sbjct: 627 AHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLID 686

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            +   G +  A K+ + M +    PN V Y  M+ G CK G + +AL LL  M +KG  P
Sbjct: 687 RMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           N+ +Y++ I  L + GK      L  QM   G  P+   Y IL
Sbjct: 747 NVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 207/411 (50%), Gaps = 20/411 (4%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           ++A     +M+  G  P ++T+  ++ F+ ++   DK +L F E  +  V  DVY++ IL
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A    +++   G SPNVV YT+L+    K+  + +A  +F ++     
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                TY+ LI GL K G  +   E Y K  L G S ++ +      ++  EGK ++   
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAK--LIGTSDNIES------DFYFEGKDTD--- 602

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
                    ++ NVVTY  L+ GLCK  +V +A  LLD M  AG  PN I Y+ L+DGFC
Sbjct: 603 --------TISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             GE D A  +F ++   G  PSV TY  LI    K G   +A  ++ +M +    P+ V
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVV 714

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT ++D   ++ + EKA  + SLM+K G SP+V TY  LI GL   G +    +LF  M
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
                 PN V Y ++I   C  G    A  LL EM +      +  Y +T+
Sbjct: 775 KTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTV 825



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 181/370 (48%), Gaps = 16/370 (4%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C  G   KAF+++ ++   GF P+   YT +I   C+   +++A +LF+++ ++G+    
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           +TYT+LI    K GL +    ++++M+  G SP++ TY  L+H Y    ++ +   +F  
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM----------------KMAGISPN 349
           M       N +TY+ LI GLCK   +Q+A  +  ++                    ISPN
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY  L++G C A +   A  L + + + G  P+ + Y+ L+  F K G    A ++  
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M + G  PS  TYT LID   +   ++ A ++ S M K   +P+V TY  ++ GLC  G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
             ++A  L + M +    PN V Y  +I G  K G     L L  +M  KG  PN  +Y 
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787

Query: 530 STIGVLCQDG 539
             I   C  G
Sbjct: 788 ILINHCCAAG 797



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 201/452 (44%), Gaps = 57/452 (12%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           +LD      +I G  EA   N+A   L+++    + PNVV Y +L+ G  K   +   K 
Sbjct: 268 KLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKR 327

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +   +   G   +   +  L+            ++ + +M   G  P    YN  I   C
Sbjct: 328 IINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC 387

Query: 292 NE-----------------------------------------GKVSEGFKLFDEMRHRE 310
                                                      GK  + F++  EM  + 
Sbjct: 388 GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              +  TY  +I  LC+  RV +A  L  +MK  G++P+V TY  LID FC AG  ++A 
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
             F++++S G SP+VVTY  L+ A+ K+     A+D+   M      P+ +TY+ LID  
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567

Query: 431 VRSDDMEKAFEMYSLM----------------QKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
            ++ +++KA E+Y+ +                     SP+V TYG L++GLC    + +A
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             L ++M     EPN +VY+ ++ G+CK G    A  +   M + G +P++ +Y+S I  
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +DG+   A  +L+QMLK    P+V  Y  +
Sbjct: 688 MFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 204/458 (44%), Gaps = 26/458 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +ID+  K+ L +QA  +F +M  +G  P   T+ +LL   +KS    +    F    
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL----------------EEMGFSPN 209
            + C      YS   LI G C+AG++ KA EV  +L                +    SPN
Sbjct: 550 GDACYPNAITYS--ALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           VV Y +L++G CK   +  A  L   +   G    Q  Y  L+ G  K G      E + 
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M   G  PS++TY  LI     +G++    K+  +M       NVVTY  ++ GLCK  
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
             ++A  LL  M+  G SPNV+TY  LIDG   AG+ D    LF Q+K+ G +P+ VTY 
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           +LI     AG    A  L+ EM++         Y   +  F  S     +  +   M+  
Sbjct: 788 ILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESH 845

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM---MIFGYCKEGNS 506
             +P    YG+LI      G ++ A +L   M E     N    +M   +I   C     
Sbjct: 846 DTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQV 905

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
             A+ L  EM  +G+VP+++++   +  L +  KW EA
Sbjct: 906 EEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEA 943



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 30/445 (6%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y +++ A+LKS+   QA   FH+M+     P + T+++L+  + K+    
Sbjct: 519 SPNVVT----YTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQ 574

Query: 159 KG-----------------WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           K                  + F  ++   +  +V ++G L+ G C+A  ++ A ++L+ +
Sbjct: 575 KACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAM 634

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G  PN ++Y +L+DG CK G+I+ A+ +F ++ + G + + HTYT LI  +FK+G  
Sbjct: 635 LAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
               +   +M  +  +P++ TY  ++   C  G+  +   L   M  +  + NVVTY  L
Sbjct: 695 DLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTAL 754

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL K  +V     L  QMK  G +PN +TY  LI+  C AG  D A  L +++K    
Sbjct: 755 IDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW 814

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              +  Y   ++ FSK   + +   L+ EME     P    Y +LIDSF ++  +E A E
Sbjct: 815 PKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALE 872

Query: 442 MYSLMQKSG-----FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++  M +        S D++T   LI  LC+   ++EA  L++ M    + P+   +  +
Sbjct: 873 LHKEMMEVSSSLNMASKDMHT--SLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCL 930

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGL 521
           + G  +      AL+L   + ++G+
Sbjct: 931 VKGLIERNKWNEALQLCYGICQEGV 955



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 158/370 (42%), Gaps = 9/370 (2%)

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           ++G+      Y +L +          A+ L R+IGE           VL+      GL  
Sbjct: 127 QVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWG 186

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
           +  E   +++  G  PS  TYN L+    + G+V   F++  EM       +  T  +  
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
             LCKE R  +A   LD ++      + +   ++I G  +A   ++A    ++++ N   
Sbjct: 247 QALCKEGRWGDA---LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI 303

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P+VVTY  L+  F K         ++  M   G  PS   +  L+ ++  ++D   A+++
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE------ASKLFNSMWETKLEPNDVVYNMM 496
           ++ M   G  P    Y + I  +C +  +        A K++  M       N +     
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANF 423

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
               C  G   +A +++ EM  KG VP+ ++Y+  I  LCQ  +  +A +L  +M K+G+
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483

Query: 557 KPSVSLYNIL 566
            P V  Y IL
Sbjct: 484 NPDVYTYTIL 493



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 163/396 (41%), Gaps = 44/396 (11%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           +L++ CC  G   +A E L +L++ G+ P+ V Y +L+      G +E A  + +++   
Sbjct: 174 VLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSAS 233

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC--LIHEYCNEGKVS 297
           G    + T       L K G   D  +  E+         L T  C  +I         +
Sbjct: 234 GFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFK-----LDTVLCTQMISGLMEASLFN 288

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E       MR      NVVTY TL+ G  K+ ++   +R+++ M   G +P+   +N L+
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS----DLVREMEE 413
             +C+A +   A++LFN++ + G  P  V YN+ I   S  G  ++ +    DL  ++ E
Sbjct: 349 HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIG--SICGREELPNPELLDLAEKVYE 406

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             +  S V   I   +F R                                LC  G  ++
Sbjct: 407 EMLVASCVLNKINTANFARC-------------------------------LCGVGKFEK 435

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A ++   M      P+   Y  +I   C+     +A  L  EM + G+ P++ +Y+  I 
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             C+ G   +A+   ++M   G  P+V  Y  L  A
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 5/216 (2%)

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           GF D   T  A RL  ++  + +       NVL+R     G    A + +  +++ G  P
Sbjct: 145 GFEDPART--AERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRP 202

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           S VTY  L+     +  +E AF +   M  SGF  D  T G     LC +G   +A  L 
Sbjct: 203 SAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLL 262

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
                   + + V+   MI G  +      A+  L  M     +PN+ +Y + +    + 
Sbjct: 263 E---REDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKK 319

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
            +    + ++N M+  G  PS SL+N L     N E
Sbjct: 320 KQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAE 355



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV---IYTSLIDGCCKNGDIERAKMLFR 234
           +G+LI    +AG L  A E+  ++ E+  S N+    ++TSLI   C +  +E A  L+ 
Sbjct: 854 YGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYS 913

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++   G+V     +  L+ GL +        ++ E +Q             L +  C EG
Sbjct: 914 EMRRRGIVPDLSAFVCLVKGLIERN------KWNEALQ-------------LCYGICQEG 954

Query: 295 KVSEGFKLFD 304
              EG K  D
Sbjct: 955 VNWEGNKFCD 964


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 206/426 (48%), Gaps = 5/426 (1%)

Query: 151 VIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
           ++++ S ++    F EN C++     ++ +LI+G C A DL+ AF +L +++  G   N 
Sbjct: 1   MVRAGSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGFEFYE 269
              + ++ G C+ G + +A   F    EL        +YT LI GL K G     F+ + 
Sbjct: 61  RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120

Query: 270 KM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           KM    G  P+ +TYN L+   C + ++     +  E R R+ A +VVTYNTL+  L + 
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            RV EA     QM   G  P ++++N +I G C A     A  +FN++      P++VTY
Sbjct: 181 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 240

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           +V+I    K+     A  L+  M   G  P  V YT L+  F  +  ++ A  +   M  
Sbjct: 241 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 300

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  PDV TY V+I  LC  G + +A ++F  +   K  PN V Y+ +I GYC+      
Sbjct: 301 QGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDE 360

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
             +++ EM  +   PN+ +Y++ I  L    +  EA  +  +M + G  P    Y  L R
Sbjct: 361 GGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKR 417

Query: 569 AKNNIE 574
           A   I+
Sbjct: 418 ALRMID 423



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 175/414 (42%), Gaps = 84/414 (20%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLL-----LSKMSSH-------SHA----------- 64
           AFSL      +G+Q   ++ SIIL+ L     +++   H       +HA           
Sbjct: 44  AFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLI 103

Query: 65  ----------AAQTLILKIIS-GRITSSSFTPRSL---LCHLTQLFPSSSNPVTKSR--- 107
                     AA  L  K+++ G    ++FT  +L   LC   +L  ++   +T++R   
Sbjct: 104 NGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRL-DAARAVITEARKRD 162

Query: 108 ------LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
                  Y +++ A  +    D+AL  F QM + G  P   +FN+               
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA--------------- 207

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                              +I G C A  L  A EV N++ +  F PN+V Y+ +IDG C
Sbjct: 208 -------------------IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLC 248

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K+  ++ A+ L  ++   G       YT L+ G    G          +M   G  P + 
Sbjct: 249 KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 308

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  +I + C  G+V +  ++F E+   + + NVVTY+ LI G C+  RV E  +++ +M
Sbjct: 309 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                 PNV+TYN +I G       ++A+ +F ++   G  P   TY  L RA 
Sbjct: 369 ---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 211/406 (51%), Gaps = 8/406 (1%)

Query: 168 RC----KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCK 222
           RC    K +L +  F ++ K   + GD  ++  +   ++ ++   PN  IYT +I    +
Sbjct: 99  RCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGR 158

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E+ + +F ++   G+  +  ++T LI    +NG  K   E  ++M+   VSPS+ T
Sbjct: 159 EGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILT 218

Query: 283 YNCLIHEYCNEGKVS--EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YN +I+  C  G +   E   LF +MRH  +  ++VTYNTL+    +     EAE +   
Sbjct: 219 YNTVINS-CARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRT 277

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M   GI P++ TY+ L++ F      +K   L  +++S G  P + +YNVL+ A +++G+
Sbjct: 278 MNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGS 337

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            K A  + R+M+  G  P+  TY+IL++ + R    +   +++  M+ S   P+  TY +
Sbjct: 338 IKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 397

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI+     G  KE   LF+ M E  +EPN   Y  +IF   K G    A ++L  MNEKG
Sbjct: 398 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKG 457

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +VP+  +Y+  I    Q   + EA V  N M ++G KP+V  YN L
Sbjct: 458 VVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSL 503



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 222/468 (47%), Gaps = 11/468 (2%)

Query: 109 YESIIDAHLKSRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SE 166
           Y ++I++  +  L  ++ L  F QM   G++    T+N+LL    +    D+  + F + 
Sbjct: 219 YNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTM 278

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   +  D+ ++  L++   +   L K  E+L ++E  G  P++  Y  L++   ++G I
Sbjct: 279 NEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSI 338

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  +FR++   G V    TY++L+    ++G   D  + + +M+++   P+  TYN L
Sbjct: 339 KEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNIL 398

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ +   G   E   LF +M    V  N+ TY  LI    K    ++A+++L  M   G+
Sbjct: 399 INVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGV 458

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  +I+ +  A   ++A   FN +   G  P+V TYN LI+ F+K G  K +  
Sbjct: 459 VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEA 518

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ +M + G+  +  T+  +I++F +    E+A + Y  M+K+   PD  T   ++   C
Sbjct: 519 ILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYC 578

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++E+ + F  +    + P+ + Y MM+  Y K      A +LL EM        ++
Sbjct: 579 FAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM----FTNRVS 634

Query: 527 SYSSTIGVLCQ-----DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +    IG + +     D  W   E +  ++   G    V  YN L  A
Sbjct: 635 NIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEA 682



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 144/382 (37%), Gaps = 72/382 (18%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +++AH +S    +A+  F QM  +G  P + T++ LL    +   +D     F E +
Sbjct: 325 YNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMK 384

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               E +  ++ ILI    E G   +   + + + E    PN+  Y  LI  C K G  E
Sbjct: 385 VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHE 444

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +   + E G+V +   YT +I    +  L ++    +  M   G  P++ TYN LI
Sbjct: 445 DAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLI 504

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL---------------------- 325
             +   G   E   +  +M    VA N  T+N +I                         
Sbjct: 505 QMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCD 564

Query: 326 -------------CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
                        C    V+E+E    ++K  GI P+V+ Y  ++  +  A   D A +L
Sbjct: 565 PDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQL 624

Query: 373 ------------------------------------FNQLKSNGQSPSVVTYNVLIRAFS 396
                                               F +LKS G S  V  YN L+ A  
Sbjct: 625 LDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALW 684

Query: 397 KAGNSKMASDLVREMEERGITP 418
             G  + A+ ++ E  +RG+ P
Sbjct: 685 WLGQKERATRVLNEATKRGLFP 706



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 118/257 (45%), Gaps = 2/257 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-W 161
           V  S+ Y  +I+A+ ++ L ++AL  F+ M + G +P   T+NSL+    K   + +   
Sbjct: 459 VPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEA 518

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +     +  V  +  +F  +I+   + G   +A +   ++E+    P+     +++   C
Sbjct: 519 ILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYC 578

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G +E ++  F +I  LG++ +   Y +++    K     D  +  ++M  N VS    
Sbjct: 579 FAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQ 638

Query: 282 TYNCLIH-EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
               +I  +Y ++        +F++++    +  V  YNTL+  L    + + A R+L++
Sbjct: 639 VIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNE 698

Query: 341 MKMAGISPNVITYNKLI 357
               G+ P +   NKL+
Sbjct: 699 ATKRGLFPELFRKNKLV 715


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 237/506 (46%), Gaps = 36/506 (7%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S P      + ++I+ + K    D+A   ++ M++ G+ P    ++ L+  + ++   ++
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328

Query: 160 GWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT---- 214
           G   FS    + V++DV  F  ++      GDL KA EV  ++ + G SPNVV Y+    
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388

Query: 215 -------------------------------SLIDGCCKNGDIERAKMLFRKIGELGLVA 243
                                          SLIDG CK+ ++     L+  +   G V 
Sbjct: 389 GLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVP 448

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                ++LI GL + G+  +   F+ +    G++ + Y +N LI       +  +G K++
Sbjct: 449 DVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY 508

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
             M   +V  +VVTY  L+ GL ++ R+ EA  L  Q+   G SP+ I Y  LIDGFC  
Sbjct: 509 ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
            +     ++F  ++SNG  P +  YNVLI  F + G  +   +L+RE+ + G+ P  VTY
Sbjct: 569 RDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             +I  +       KA +++ +++     P+  T+ +LI   C  G M +A  +F+SM E
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPE 543
              EPN + Y+ +I GY K  N+  A  L  +M    + PNI SYS  I  LC+ G   E
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748

Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
           A +     +   L P V  Y IL R 
Sbjct: 749 ASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 255/577 (44%), Gaps = 49/577 (8%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P  A   F WA    GL H  QS   I  +LL     H      T +   + G+     F
Sbjct: 69  PTSALRFFEWAENFLGLCHPVQSFCGIAHVLLR----HRMFDPATRVFDRMVGQ-----F 119

Query: 84  TPRSLLCHLTQLFPS-SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
               +L      F +  SNP   S +Y  ++  + ++ + D+A+  F  M   GV     
Sbjct: 120 GNLEVLGEFHGSFRNYGSNP---STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHY 176

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGI---------------------- 180
             + +L  +I S   D   L   E  CK  L VY F                        
Sbjct: 177 AASEMLDLLIDSDRIDV-ILENYEEMCK-GLGVYEFVFNSFLKRGEVEKGLNFHRALVER 234

Query: 181 -----------LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                      ++KG C    +  A +  + +   G SPN+V +++LI+  CK   ++ A
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
             L+  + E G+V     Y++LI GLF+ G  ++G   +      GV   +  ++ ++  
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           Y   G + +  +++  M    ++ NVVTY+ LI GLC+  RV EA  +  Q+   G+ P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V+TY+ LIDGFC +      F L+  +   G  P VV  ++LI   S+ G    A     
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +  +RG+T +   +  LID   R        +MY LM      PDV TY VL+ GL  +G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            + EA  LF  + +    P+ ++Y  +I G+CK+ +    L++   M   G+ P+I  Y+
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             I +  ++G       LL +++K GL+P +  YN +
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 219/453 (48%), Gaps = 36/453 (7%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           ++ SI+DA+++     +A+  + +ML  G+ P   T++ L+  + ++    +    F + 
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            +  +E  V ++  LI G C++ +L   F +   +   G  P+VV+ + LI+G  + G +
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A   F +  + GL    + +  LI G F+    +DG + Y  M +  V P + TY  L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK------------------- 327
           +     +G++ E   LF ++  +  + + + Y TLI G CK                   
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586

Query: 328 ----------------EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                           E  V+    LL ++   G+ P+++TYN +I G+C      KA +
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           LF  LK     P+ +T+ +LI A+ K G    A  +   M ERG  P+ +TY+ LID + 
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++++ E AFE+Y  M     SP++ +Y +LI GLC KG M+EAS  F       L P+ +
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVI 766

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            Y ++I GYCK G    A+ L   M   G++P+
Sbjct: 767 AYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 222/442 (50%), Gaps = 5/442 (1%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKG 184
           +F  M+ SG  P   TF++L+    K    D+ +  ++   E     +L +YS  ILI G
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS--ILING 319

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
              AG L +   + +     G   +VVI++S++D   + GD+ +A  ++ ++ + G+   
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             TY++LI GL +NG   +    + ++   G+ PS+ TY+ LI  +C    + +GF L+ 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M  +    +VV  + LI GL ++  + EA R   Q    G++ N   +N LIDG     
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
            T    +++  +      P VVTY VL++  ++ G    A  L  ++ ++G +P  + Y 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID F +  D     +++ LMQ +G  PD+  Y VLI+    +G ++   +L   + + 
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            LEP+ V YN MI GYC      +A++L   +      PN  +++  I   C+DG+  +A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 545 EVLLNQMLKLGLKPSVSLYNIL 566
            ++ + ML+ G +P++  Y+ L
Sbjct: 680 MLIFSSMLERGPEPNILTYSCL 701



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 182/385 (47%), Gaps = 1/385 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y S+ID   KS         +  ML  G  P     + L+  + +    D+    FF   
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  + L+ Y F  LI GC          ++   +      P+VV YT L+ G  + G ++
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++ + G       Y  LI G  K      G + ++ MQ NG+ P +  YN LI
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + +  EG V    +L  E+    +  ++VTYNT+ICG C      +A +L + +K     
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ 657

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN IT+  LID +C  G  D A  +F+ +   G  P+++TY+ LI  + K  N++ A +L
Sbjct: 658 PNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFEL 717

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M    ++P+ V+Y+ILID   +   ME+A   +         PDV  YG+LI G C 
Sbjct: 718 YEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCK 777

Query: 468 KGNMKEASKLFNSMWETKLEPNDVV 492
            G + EA  L++ M    + P+D++
Sbjct: 778 VGRLAEAMMLYDHMLVNGIMPDDLL 802



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G +P+ + Y+ L+  +C  G  D+A   F  +   G S S    + ++     +    + 
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +   EM  +G+      Y  + +SF++  ++EK    +  + + G  P +     ++ G
Sbjct: 195 LENYEEMC-KGLG----VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LCM   +  AS  F+ M  +   PN V ++ +I  YCKE     A  L   M EKG+VP+
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  YS  I  L + GK  E   L +  L  G+K  V +++ +  A
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 231/444 (52%), Gaps = 9/444 (2%)

Query: 132 MLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M  +G  P S TFN+L+  F  +    D   L  +     ++ +V S+  L++G C+   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 191 LNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
            ++A E++  +   G   +P++V Y++L+ G CK G +E ++ L +++   GL      Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T ++  L K+    +  E  E+M   G  P+L T+N LI   C E  +     L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  +VVTYNTL+ GLCK  R+QEAE+LL++MK +G +P+V+ Y+  + G C +G+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GITPSEVTYTILI 427
           A ++  Q++ +   P+VVTYN ++    K+G    A +++ +M    G   + V Y+ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   +    ++A  +   M ++G  PDV TY  L++GLC  G ++EA +    M     +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-----PNIASYSSTIGVLCQDGKWP 542
           PN V Y  ++ G C  G    A R++ EM+  G       P++++Y++ IG LC+ G+  
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A     +M   G  P    Y+ +
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTI 444



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 6/384 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ ++  L+ G C+AG + ++ E+L ++   G  P+ ++YT ++   CK+  +  A  L 
Sbjct: 81  DMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELL 140

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G   T  T+  LI G  +    +      +KM  +GV   + TYN L+   C  
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKA 200

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E  +L + M+    A +VV Y++ + GLCK  +V +A ++L+QM+ +   PNV+TY
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTY 260

Query: 354 NKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           N ++DG C +G+ D A  +  Q+  S+G   +VV Y+ ++    K G ++ A  ++  M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
             G  P  VTY+ L++   ++  +E+A E    M   G  P+  TY  L+HGLC  G + 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 473 EASKLFNSMWETK-----LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           EA ++   M           P+   YN +I G CK G    AL+    M  +G  P+  S
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
           YS+ +  L + G+  +AE++L+++
Sbjct: 441 YSTIVEGLARSGRALQAEMILSEV 464



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 7/310 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I    + +  + A     +M  SGV+    T+N+L+  + K+    +        +
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV ++   + G C++G +  A +VL Q+ +    PNVV Y +++DG CK+G I+
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKID 274

Query: 228 RA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A +M+ +     G       Y+ ++ GL K G  ++     E M   G  P + TY+ L
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG- 345
           ++  C  GK+ E  +   EM       N VTY +L+ GLC   R+ EAER++++M   G 
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394

Query: 346 ----ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 P+V TYN LI G C AG  D A + F +++S G  P  V+Y+ ++   +++G +
Sbjct: 395 GGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454

Query: 402 KMASDLVREM 411
             A  ++ E+
Sbjct: 455 LQAEMILSEV 464



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 138/276 (50%), Gaps = 7/276 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSEN 167
           Y +++D   K+    +A     +M  SG  P    ++S +  + KS    D   +     
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR 249

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM-GFSPNVVIYTSLIDGCCKNGDI 226
               + +V ++  ++ G C++G ++ A E++ Q+    G   NVV Y++++DG CK G  
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+ +   +   G      TY+ L+ GL K G  ++  E   +M + G  P+  TY  L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVA---C--NVVTYNTLICGLCKEMRVQEAERLLDQM 341
           +H  C+ G+++E  ++ +EM         C  +V TYN LI GLCK  R+ +A +   +M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           +  G  P+ ++Y+ +++G   +G   +A  + ++++
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 229/484 (47%), Gaps = 26/484 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L+ ++I    +    D+AL  F  M +    P   T+N+++  + K+   D+G   F + 
Sbjct: 36  LHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDM 94

Query: 168 RCKVEL------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
             + E       DV S+  +I   C+A  ++KA+E   ++  +G +PNVV Y+SLIDG C
Sbjct: 95  EKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLC 154

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K   ++ A  L  ++    +V     Y  ++ G  + G   +  E    M+  G   ++ 
Sbjct: 155 KVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINII 214

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            +N ++H      +  +  + F+ +       NVVTYN  + GLCK  +V EA R+L +M
Sbjct: 215 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEM 274

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
             + ++P+VITY+ +IDGFC AG  DKA  +F ++  +   P  VT+  L+  FS+   S
Sbjct: 275 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 334

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  +  +M   G  P   TY +L+D    +D +E A E+Y  M++    PD  TY  L
Sbjct: 335 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPL 394

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-------- 513
           I  LC    + EA +  + M    + PN  + + ++   CK+G    A  +L        
Sbjct: 395 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICK 454

Query: 514 -GEMNE----------KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            GE +E          KG+ P+ A+Y + +  LC   +   A     +M   G  P +  
Sbjct: 455 AGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVT 514

Query: 563 YNIL 566
           Y +L
Sbjct: 515 YTLL 518



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 193/360 (53%), Gaps = 6/360 (1%)

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
           +YT++I+G CK G +++A  L  ++ E G+      ++ LI GL + G   +  E ++ M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-----NVVTYNTLICGLC 326
                SP++ TYN +++  C   ++ EG +LFD+M  R  A      +V++Y+T+I  LC
Sbjct: 61  G-EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  RV +A     +M+  G +PNV+TY+ LIDG C     D+A+ L  QLK     P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            YN ++  F + G      +L+  M+E+G   + + +  ++ +  ++D+ EKA + +  +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            KSG  P+V TY V +HGLC  G + EA ++   M E+K+ P+ + Y+ +I G+CK G  
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +A  +   M     +P+  ++ + +    +  K  EA  +   M+  G  P +  YN+L
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 201/394 (51%), Gaps = 6/394 (1%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +  +I G C+AG +++AFE+L++++E G   +V+++++LI G C+ G I+ A   F+ +G
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL-----NGVSPSLYTYNCLIHEYCN 292
           E        TY  ++ GL K     +G E ++ M+      +G  P + +Y+ +I   C 
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
             +V + ++ F  MR    A NVVTY++LI GLCK  RV EA  LL Q+K   + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN +++GF   G+  +   L   +K  G   +++ +N ++ A  K    + A      + 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           + G  P+ VTY + +    ++  +++A+ +   M +S  +PDV TY  +I G C  G M 
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           +A  +F  M   +  P+ V +  ++ G+ +   S  A R+  +M   G +P + +Y+  +
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             +C       A  + ++M +   +P  + Y  L
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPL 394



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 11/422 (2%)

Query: 153 KSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG--FSPN 209
           K+   D+ +    E + + V++DV     LI+G C  G +++A E   Q + MG   SPN
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE---QFKSMGEECSPN 67

Query: 210 VVIYTSLIDGCCKNGDIERAKMLF-----RKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           V+ Y ++++G CK   I+    LF     R     G      +Y+ +I  L K       
Sbjct: 68  VITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKA 127

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           +E++++M+  G +P++ TY+ LI   C   +V E + L  +++  ++    + YN ++ G
Sbjct: 128 YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNG 187

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             ++ +  E   LL  MK  G   N+I +N ++       E +KA + F +L  +G+ P+
Sbjct: 188 FKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPN 247

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVTYNV +    KAG    A  ++ EM E  +TP  +TY+ +ID F ++  M+KA ++++
Sbjct: 248 VVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFT 307

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M      P   T+  L+HG       +EA ++   M      P    YN+++   C   
Sbjct: 308 RMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGAD 367

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +   AL +  +M  K   P+  +Y+  I  LC+  +  EA+  L+ M    + P+ ++ +
Sbjct: 368 SVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICH 427

Query: 565 IL 566
            L
Sbjct: 428 AL 429



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 187/409 (45%), Gaps = 19/409 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V ++  Y ++++   +     + L     M + G       FN++L  + K+   +K   
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           FF    +   + +V ++ + + G C+AG +++A+ +L ++ E   +P+V+ Y+S+IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G +++A  +F ++     +    T+  L+ G  ++   ++ F  +E M   G  P L 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TYN L+   C    V    +++ +M+ ++   +  TY  LI  LC+  RV EA+  LD M
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +   + PN    + L++  C  GE D+A  + +              NV+     KAG  
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLD--------------NVV--EICKAGEP 458

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             A +++ +M  +G+ P E TY  ++ S    D ++ A   +  M   G +P + TY +L
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           I   C      +A ++F +M      P      M     C     Y+ L
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQ--AQTMRTLSSCLRDAGYQDL 565


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 213/449 (47%), Gaps = 10/449 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L+   +P    +N+L+    K    D         R K    D  ++ I+I   C  G
Sbjct: 144 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L+ A +VL+QL      P V+ YT LI+     G ++ A  L  ++   GL     TY 
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K G+    FE    ++L G  P + +YN L+    N+GK  EG KL  +M   
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
           +   NVVTY+ LI  LC++ +++EA  LL  MK  G++P+  +Y+ LI  FC  G  D A
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                 + S+G  P +V YN ++    K G +  A ++  ++ E G +P+  +Y  +  +
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
              S D  +A  M   M  +G  PD  TY  +I  LC +G + +A +L   M   +  P+
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPS 503

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN+++ G+CK      A+ +L  M   G  PN  +Y+  I  +   G   EA  L N
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 563

Query: 550 QMLKLG---------LKPSVSLYNILYRA 569
            ++++          L  +  L N+L R+
Sbjct: 564 DLVRINAISEYSFKRLHRTFPLLNVLQRS 592



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 177/368 (48%), Gaps = 11/368 (2%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L QL   +  P   +  Y  +I+A +     D+AL    +ML  G++P   T+N+++  +
Sbjct: 212 LDQLLSDNCQPTVIT--YTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 152 IKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            K    D+ +        K  E DV S+ IL++     G   +  +++ ++      PNV
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           V Y+ LI   C++G IE A  L + + E GL    ++Y  LI    + G      EF E 
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKE 328
           M  +G  P +  YN ++   C  GK  +  ++F ++   EV C  N  +YNT+   L   
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNSSSYNTMFSALWSS 447

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
                A  ++ +M   GI P+ ITYN +I   C  G  DKAF L   ++S    PSVVTY
Sbjct: 448 GDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF----VRSDDMEKAFEMYS 444
           N+++  F KA   + A D++  M   G  P+E TYT+LI+       R++ ME A ++  
Sbjct: 508 NIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567

Query: 445 LMQKSGFS 452
           +   S +S
Sbjct: 568 INAISEYS 575



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 117/241 (48%), Gaps = 1/241 (0%)

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           C+     E+  LL+ M   G +P+VI   KLI GF       KA R+   L+  GQ P V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDV 154

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
             YN LI  F K      A+ ++  M  +  +P  VTY I+I S      ++ A ++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           +      P V TY +LI    ++G + EA KL + M    L+P+   YN +I G CKEG 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             RA  ++  +  KG  P++ SY+  +  L   GKW E E L+ +M      P+V  Y+I
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 566 L 566
           L
Sbjct: 335 L 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
           K+    C +G   ++  L   +   G +P V+    LI+ F    N   A  ++  +E+ 
Sbjct: 90  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKF 149

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P    Y  LI+ F + + ++ A  +   M+   FSPD  TY ++I  LC +G +  A
Sbjct: 150 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            K+ + +     +P  + Y ++I     EG    AL+LL EM  +GL P++ +Y++ I  
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 535 LCQDGKWPEA-EVLLNQMLKLGLKPSVSLYNILYRA 569
           +C++G    A E++ N  LK G +P V  YNIL RA
Sbjct: 269 MCKEGMVDRAFEMIRNLELK-GCEPDVISYNILLRA 303


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 193/374 (51%)

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
            EVL++  E    P+V+ YT LI+  C    + +A  L  ++G  G      TY VL+ G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
           + K G   +  +F   M   G  P++ T+N ++   C+ G+  +  KL  EM  +  + +
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
           VVT+N LI  LC++  +  A  +L++M   G +PN ++YN L+ GFC   + D+A +   
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            + S G  P +VTYN ++ A  K G    A +L+ ++  +G +P  +TY  +ID   +  
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             ++A E+   M+  G  PDV TY  LI GL  +G ++EA K F+ +    ++PN   YN
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++FG CK   + RA+  L  M  KG  P   SY+  I  +  +G   EA  LLN++   
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360

Query: 555 GLKPSVSLYNILYR 568
           G+    S   ++ R
Sbjct: 361 GVVKKSSAEQVVVR 374



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 178/349 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++ ILI+  C    + +A ++L+++   G  P+VV Y  L++G CK G ++ A    
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G      T+ +++  +   G   D  +   +M   G SPS+ T+N LI+  C +
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +     + ++M       N ++YN L+ G CKE ++  A + L+ M   G  P+++TY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C  G+ D A  L NQL S G SP ++TYN +I   SK G +  A +L+ EM  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P  +TY+ LI    R   +E+A + +  ++  G  P+ +TY  ++ GLC       
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           A      M     +P +V Y ++I G   EG +  AL LL E+  +G+V
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 7/313 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS----FDKGWLFF 164
           Y  +++   K    D+A+ + + M   G +P   T N   I +   CS     D   L  
Sbjct: 54  YNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHN---IILRSMCSTGRWMDAEKLLT 110

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              R      V +F ILI   C  G L +A ++L ++   G +PN + Y  L+ G CK  
Sbjct: 111 EMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEK 170

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++RA      +   G      TY  ++  L K+G      E   ++   G SP L TYN
Sbjct: 171 KMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 230

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I      GK  +  +L  EMR + +  +V+TY++LI GL +E +V+EA +    ++  
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGF 290

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ PN  TYN ++ G C A +TD+A      + S G  P+ V+Y +LI   +  G +K A
Sbjct: 291 GVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEA 350

Query: 405 SDLVREMEERGIT 417
            +L+ E+  RG+ 
Sbjct: 351 LELLNELCSRGVV 363



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCE 187
           +M+  G  P   TFN L+ F+ +     +      +   + C    +  S+  L+ G C+
Sbjct: 111 EMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTP--NSLSYNPLLHGFCK 168

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              +++A + L  +   G  P++V Y +++   CK+G ++ A  L  ++   G      T
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 228

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  +I GL K G      E   +M+  G+ P + TY+ LI     EGKV E  K F ++ 
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              V  N  TYN+++ GLCK  +   A   L  M   G  P  ++Y  LI+G  + G   
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIR 393
           +A  L N+L S G         V++R
Sbjct: 349 EALELLNELCSRGVVKKSSAEQVVVR 374



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 53/94 (56%)

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           ++ +   E +  P+ + Y ++I   C E    +A++LL EM  +G  P++ +Y+  +  +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C++G+  EA   LN M   G +P+V  +NI+ R+
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRS 95


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 228/490 (46%), Gaps = 21/490 (4%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           SS   T +     ++ A  +  L D+AL+ F ++      P     N++L  ++K+    
Sbjct: 112 SSTSTTPAPALGVLVIALSQMGLLDEALYVFRRLRTLPALP---ACNAVLDGLVKARRPG 168

Query: 159 KGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
             W  F E  R  +   V ++  LI  C   G + KA EV +Q+      PNVV YT++I
Sbjct: 169 CAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMI 228

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
              C+ G I  A+ LF  + E G+   Q+TY VL+ G  +          Y+++  +G++
Sbjct: 229 CALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLN 288

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+   +  LI  +C   + SE   +F EM    VA  V  YN+L+ G  +    QEA  L
Sbjct: 289 PNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALAL 348

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M   G+ P+  T + ++ G CD G+   A R    ++ +G + +   YN LI  + +
Sbjct: 349 YQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCR 408

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            GN + A      M E GI P+ V+Y+ LID   +   M+ A  +Y+ M   G  P+V T
Sbjct: 409 IGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVT 468

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE-- 515
           Y  LIHG    G +  A +L   M E  + PN +  ++++ G C+E     A+R + E  
Sbjct: 469 YTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYS 528

Query: 516 ---------------MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
                          + E+ L+PN   Y + I  L  DG+  EA  L + M K G+ P  
Sbjct: 529 GLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDS 588

Query: 561 SLYNILYRAK 570
             Y +L R +
Sbjct: 589 FTYTLLIRGQ 598



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 5/350 (1%)

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ A  +FR++  L  +   +    ++ GL K       +E +++M   G+ PS+ TY
Sbjct: 133 GLLDEALYVFRRLRTLPALPACNA---VLDGLVKARRPGCAWELFDEMLRRGLVPSVVTY 189

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+    +G V++  +++D+M  +++  NVVTY T+IC LC+E  + +AERL D MK 
Sbjct: 190 NTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKE 249

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG+ PN  TYN L+ G C   + + A  L+ +L  +G +P+ V +  LI  F KA     
Sbjct: 250 AGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSE 309

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  +  EM   G+ P+   Y  L+D   RS + ++A  +Y  M + G  PD +T  +++ 
Sbjct: 310 AKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVR 369

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC  G M  A +    + E  +  N   YN +I  YC+ GN   AL     M E G+ P
Sbjct: 370 GLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEP 429

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY--RAKN 571
           N+ SYSS I    + GK   A  +  +M+  G++P+V  Y  L    AKN
Sbjct: 430 NVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 479



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 229/471 (48%), Gaps = 26/471 (5%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD----KGWLFFSE 166
           +++D  +K+R    A   F +ML  G+ P   T+N+L    I +C F     K    + +
Sbjct: 156 AVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTL----INACRFQGTVAKAQEVWDQ 211

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + ++ +V ++  +I   CE G +  A  + + ++E G  PN   Y  L+ G C+  D
Sbjct: 212 MVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDD 271

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A +L++++ + GL      +T LI G  K     +    + +M   GV+P++  YN 
Sbjct: 272 VNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+      G   E   L+ EM    +  +  T + ++ GLC   ++  A+R L  ++  G
Sbjct: 332 LMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDG 391

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++ N   YN LID +C  G  ++A     ++   G  P+VV+Y+ LI   SK G  ++A 
Sbjct: 392 VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAM 451

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            +  EM  +GI P+ VTYT LI    ++  ++ AF ++  M ++G SP+  T  VL+ GL
Sbjct: 452 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL 511

Query: 466 CMKGNMKEASKLFN-----------------SMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
           C +  ++EA +                    ++ E  L PN V+Y  +I+G   +G    
Sbjct: 512 CRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCE 571

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           A +L   M + G++P+  +Y+  I   C  G    A +L   M+K+G+KP+
Sbjct: 572 AGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 201/434 (46%), Gaps = 53/434 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           Y ++I+A        +A   + QM+   + P   T+ +++  + +  C  D   LF +  
Sbjct: 189 YNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMK 248

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ + Y++ +L+ G C+  D+N A  +  +L + G +PN VI+T+LIDG CK     
Sbjct: 249 EAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFS 308

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F ++   G+  T   Y  L+ G F++G  ++    Y++M   G+ P  +T + ++
Sbjct: 309 EAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVV 368

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ G++    +    ++   V  N   YN LI   C+   ++EA     +M   GI 
Sbjct: 369 RGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIE 428

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV++Y+ LIDG    G+   A  ++ ++ + G  P+VVTY  LI   +K G    A  L
Sbjct: 429 PNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRL 488

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAF--------------------------- 440
            +EM E GI+P+ +T ++L+D   R + +++A                            
Sbjct: 489 HKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC 548

Query: 441 -------------------------EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
                                    +++S M+KSG  PD +TY +LI G CM G +  A 
Sbjct: 549 LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAM 608

Query: 476 KLFNSMWETKLEPN 489
            L+  M +  ++P 
Sbjct: 609 MLYADMMKIGVKPT 622



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 18/195 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y S+ID H K      A+  + +M+  G+ P   T+ +L+    K+   D  +    E  
Sbjct: 434 YSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI 493

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ-----------------LEEMGFSPNV 210
              +  +  +  +L+ G C    + +A   + +                 +EE    PN 
Sbjct: 494 ENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNS 553

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
           VIY +LI G   +G    A  LF  + + G++    TYT+LI G    G   +    Y  
Sbjct: 554 VIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYAD 613

Query: 271 MQLNGVSPSLYTYNC 285
           M   GV P+ Y   C
Sbjct: 614 MMKIGVKPTRYKIEC 628


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 214/442 (48%), Gaps = 20/442 (4%)

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           R+  +N  L F+   C  DKG+            DV     LIKG   + ++ KA  V+ 
Sbjct: 81  RAGKYNESLYFL--ECMVDKGY----------TPDVILCTKLIKGFFNSRNIGKATRVME 128

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
            LE  G  P+V  Y +LI G  K   +E A  +  ++   G +    TY ++I      G
Sbjct: 129 ILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
                 E +E++  +   P++ TY  LI     +G +    KL DEM  + +  + +TYN
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I G+CKEM V +A  LL  +   G  P++ITYN L+      G+  +  +L +++ S 
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P+VVT+++LI    + G  + A +L+R M+E+G+ P    Y  LI  F R   ++ A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            E    M   G  PD+  Y  ++ GLC  G   +A ++F  + E    PN   YN +   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
               G+ YRAL ++ ++  +G+ P+  +Y+S I  LC+DG   EA  LL  M     +P+
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487

Query: 560 VSLYNILY-------RAKNNIE 574
           V  YNI+        RA + IE
Sbjct: 488 VVSYNIILLGLCKVNRANDAIE 509



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 201/422 (47%), Gaps = 1/422 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAG 189
           ++L+   +P    +N+L+   IK+   +         + +  L DV ++ I+I   C  G
Sbjct: 128 EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L+ A E+  +L +    P V+ YT LI+    +G I+ A  L  ++   GL     TY 
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I G+ K  +    FE    +   G  P + TYN L+    + GK SEG KL  EM   
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               NVVT++ LI  LC++ +V+EA  LL  MK  G+ P+   Y+ LI GFC  G  D A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
                 + S+G  P +V YN ++    + G +  A ++  +++E G  P+  +Y  L  +
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
              S D  +A EM   +   G  PD  TY  LI  LC  G + EA +L   M   +  PN
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN+++ G CK   +  A+ +L  M EKG  PN  +Y   I  +   G   EA  L N
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELAN 547

Query: 550 QM 551
            +
Sbjct: 548 SL 549



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 191/386 (49%), Gaps = 1/386 (0%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L+   C AG  N++   L  + + G++P+V++ T LI G   + +I +A  +   +   G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                  Y  LI G  K    ++     ++M+  G  P + TYN +I  +C+ GK+    
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           ++F+E+        V+TY  LI     +  +  A +LLD+M   G+ P+ +TYN +I G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C     DKAF L   L S G  P ++TYN+L+R     G       L+ EM   G  P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VT++ILI +  R   +E+A  +   M++ G  PD Y Y  LI G C +G +  A++    
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M      P+ V YN ++ G C+ G + +AL +  +++E G  PN++SY++    L   G 
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A  ++ ++L  G+ P    YN L
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSL 459



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 210/444 (47%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           +++L++   M+D G  P       L+     S +  K            + DV+++  LI
Sbjct: 86  NESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALI 145

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G  +A  L  A  VL++++  GF P+VV Y  +I   C  G ++ A  +F ++ +    
Sbjct: 146 SGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCE 205

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
            T  TYT+LI     +G      +  ++M   G+ P   TYN +I   C E  V + F+L
Sbjct: 206 PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL 265

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
              +  R    +++TYN L+  L    +  E E+L+ +M   G  PNV+T++ LI   C 
Sbjct: 266 LRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCR 325

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G+ ++A  L   +K  G  P    Y+ LI  F + G   +A++ +  M   G  P  V 
Sbjct: 326 DGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVN 385

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           Y  ++    R+   ++A E++  + + G  P+V +Y  L   L   G+   A ++   + 
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL 445

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              ++P+++ YN +I   C++G    A+ LL +M      PN+ SY+  +  LC+  +  
Sbjct: 446 NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAN 505

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  +L  M + G +P+ + Y +L
Sbjct: 506 DAIEVLAAMTEKGCQPNETTYILL 529



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 212/453 (46%), Gaps = 20/453 (4%)

Query: 78  ITSSSFTPRSLLC-HLTQLFPSSSNPVTKSRL--------------YESIIDAHLKSRLS 122
           +    +TP  +LC  L + F +S N    +R+              Y ++I   +K+   
Sbjct: 95  MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQL 154

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFG 179
           + A     +M   G  P   T+N ++         D     F E   + C  E  V ++ 
Sbjct: 155 ENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNC--EPTVITYT 212

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           ILI+     G ++ A ++L+++   G  P+ + Y ++I G CK   +++A  L R +   
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G      TY +L+  L   G   +G +   +M   G  P++ T++ LI   C +GKV E 
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L   M+ + +  +   Y+ LI G C+E R+  A   L+ M   G  P+++ YN ++ G
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G+ D+A  +F +L   G  P+V +YN L  A   +G+   A +++ ++  +GI P 
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           E+TY  LI    R   +++A E+   MQ   + P+V +Y +++ GLC      +A ++  
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLA 512

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           +M E   +PN+  Y ++I G    G    A+ L
Sbjct: 513 AMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 154/375 (41%), Gaps = 63/375 (16%)

Query: 4   SKQGEGQALTLNLISR-MAK-LPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSH 61
           SK  E   LT N I R M K +   KAF L    S +G +    + +I+LR LLS+    
Sbjct: 236 SKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSR---G 292

Query: 62  SHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRL 121
             +  + LI ++IS                         N VT S L    I    +   
Sbjct: 293 KWSEGEKLISEMIS--------------------IGCKPNVVTHSIL----IGTLCRDGK 328

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
            ++A+     M + G++P                                  D Y +  L
Sbjct: 329 VEEAVNLLRSMKEKGLKP----------------------------------DAYCYDPL 354

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I G C  G L+ A E L  +   G  P++V Y +++ G C+ G  ++A  +F K+ E+G 
Sbjct: 355 IAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC 414

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                +Y  L   L+ +G +    E   K+   G+ P   TYN LI   C +G V E  +
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L  +M+      NVV+YN ++ GLCK  R  +A  +L  M   G  PN  TY  LI+G  
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIG 534

Query: 362 DAGETDKAFRLFNQL 376
            +G   +A  L N L
Sbjct: 535 FSGLRAEAMELANSL 549


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 229/459 (49%), Gaps = 3/459 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVY 176
           +++  +A+  F+Q+     +P ++ +NS++I ++    ++K    ++E  N  +   D  
Sbjct: 168 AKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTV 227

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI   C+ G  + A  +LN++++ G  P   IYT L+    K  ++  A  LF ++
Sbjct: 228 TYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEM 287

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
                     TYT LI GL K G   + + F+ +M+  G  P     N +I+     G++
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRL 347

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYNK 355
            +  KLF+EM       +VVTYNT+I  L + + RV E     ++MK +GISP+  TY+ 
Sbjct: 348 DDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSI 407

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDGFC    T+KA  L  ++   G  P    Y  LI A  KA    +A++L +E++E  
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENC 467

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
            + S   Y ++I    ++  ++ A +++  M + G +P+VY Y  L+ GL   G + EA 
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEAL 527

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
                M +    P+   YN+++    K G   RA+ +L  M +  + P+  SY++ +G L
Sbjct: 528 TTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGAL 587

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
              G + EA  L+ +M  +G    +  Y+ +  A   ++
Sbjct: 588 SHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVD 626



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 190/390 (48%), Gaps = 9/390 (2%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q FP +         Y ++I A  K    D A++  ++M D+G++P +  +  L+  + K
Sbjct: 221 QCFPDTVT-------YSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFK 273

Query: 154 SCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI 212
             +       F E R +    DV+++  LI+G  +AG L++A+   +++   G  P+ V+
Sbjct: 274 LDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVL 333

Query: 213 YTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF-EFYEKM 271
             ++I+   K G ++ A  LF ++  L  + +  TY  +I  LF++  +      ++E+M
Sbjct: 334 MNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERM 393

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
           + +G+SPS +TY+ LI  +C   +  +   L +EM  +        Y +LI  L K  R 
Sbjct: 394 KGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 453

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
             A  L  ++K    S +   Y  +I     AG  D A  LF+++   G +P+V  YN L
Sbjct: 454 DLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNAL 513

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +   ++AG    A   +R M++ G  P   +Y I++++  ++   ++A  M   M++S  
Sbjct: 514 MSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAI 573

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            PD  +Y  ++  L   G  +EA+KL   M
Sbjct: 574 KPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 70/157 (44%), Gaps = 5/157 (3%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           + +R+Y  +I    K+   D A+  F +M   G  P    +N+L+  + ++   D+    
Sbjct: 470 SSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTT 529

Query: 164 ---FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                ++ C    D+ S+ I++    + G  ++A  +L  +++    P+ V Y +++   
Sbjct: 530 MRRMQDHGCIP--DINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGAL 587

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
              G  E A  L +++  +G      TY+ ++  + K
Sbjct: 588 SHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 231/462 (50%), Gaps = 7/462 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF----SENRCKVEL 173
           + ++ ++AL  F+Q+     RP + T+NS+++ +++    +K    +    SE  C    
Sbjct: 172 RVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFP-- 229

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  LI    +    + A  + ++++E G  P   IYT+L+    K G +E A  L 
Sbjct: 230 DTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLV 289

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++     V T +TYT LI GL K+G  +D +  Y+ M  +G  P +   N LI+     
Sbjct: 290 HEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRS 349

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE-MRVQEAERLLDQMKMAGISPNVIT 352
            ++ E  +LF+EMR      NVVTYNT+I  L ++     EA   L++MK  G+ P+  T
Sbjct: 350 DRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFT 409

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y+ LIDGFC     +KA  L  ++   G  P    Y  LI +  KA   + A++L +E++
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           E   + S   Y ++I  F +     +A  +++ M+K G  PDVY Y  LI G+     M 
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  LF +M E    P+   +N+++ G  + G   RA+ +  +M    + P+  SY++ +
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           G L + G + EA  L+ +M   G +  +  Y+ +  A   ++
Sbjct: 590 GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVD 631



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 2/329 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    KS   + A   +  ML  G +P     N+L+  + +S    +    F E R
Sbjct: 304 YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363

Query: 169 C-KVELDVYSFGILIKGCCE-AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 +V ++  +IK   E     ++A   L ++++ G  P+   Y+ LIDG CK   +
Sbjct: 364 LLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRV 423

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A +L  ++ E G       Y  LI  L K    +   E +++++ N  S S+  Y  +
Sbjct: 424 EKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVM 483

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +   G+ +E   LF+EM+      +V  YN LI G+ +   + EA  L   M+  G 
Sbjct: 484 IKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGC 543

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++ ++N +++G    G   +A  +F ++KS+   P  V+YN ++   S+AG  + A+ 
Sbjct: 544 NPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATK 603

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDD 435
           L++EM  +G     +TY+ ++++  + D+
Sbjct: 604 LMKEMNSKGFEYDLITYSSILEAVGKVDE 632



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 2/287 (0%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI        V E ++   +M     A      + ++  L +   V +A  +  Q+
Sbjct: 127 TYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQV 186

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGN 400
           K     P   TYN +I      G  +K   L+N++ S G   P  VTY+ LI AF K   
Sbjct: 187 KGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNR 246

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  EM+E G+ P+   YT L+  + +   +E+A  +   M+     P VYTY  
Sbjct: 247 DDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTE 306

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GL   G +++A  ++ +M +   +P+ V+ N +I    +      A+ L  EM    
Sbjct: 307 LIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLN 366

Query: 521 LVPNIASYSSTIGVLCQDGKWP-EAEVLLNQMLKLGLKPSVSLYNIL 566
             PN+ +Y++ I  L +D   P EA   L +M K G+ PS   Y+IL
Sbjct: 367 CTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 18/305 (5%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG------- 160
           L  ++I+   +S    +A+  F +M      P   T+N+    +IKS   DK        
Sbjct: 338 LMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT----IIKSLFEDKAPPSEASS 393

Query: 161 WLFFSENRCKVELDV---YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           WL     R K +  V   +++ ILI G C+   + KA  +L +++E GF P    Y SLI
Sbjct: 394 WL----ERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 449

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +   K    E A  LF+++ E    ++   Y V+I    K G   +    + +M+  G  
Sbjct: 450 NSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCI 509

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P +Y YN LI        + E F LF  M       ++ ++N ++ GL +    + A  +
Sbjct: 510 PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEM 569

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +MK + I P+ ++YN ++     AG  ++A +L  ++ S G    ++TY+ ++ A  K
Sbjct: 570 FAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629

Query: 398 AGNSK 402
               +
Sbjct: 630 VDEDR 634



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-- 164
           R+Y  +I    K    ++A+  F++M   G  P    +N+L+  ++++   D+ +  F  
Sbjct: 478 RVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRT 537

Query: 165 -SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
             EN C    D+ S  I++ G    G   +A E+  +++     P+ V Y +++    + 
Sbjct: 538 MEENGCNP--DINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRA 595

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLI 252
           G  E A  L +++   G      TY+ ++
Sbjct: 596 GLFEEATKLMKEMNSKGFEYDLITYSSIL 624


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 245/541 (45%), Gaps = 104/541 (19%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGC 185
           +  M+ +GV P + TFN L+  + +S + D     F   SE  C+   + ++ GIL++G 
Sbjct: 139 YTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQP--NKFTVGILVRGF 196

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C AG   +A E ++   +MG + N V+Y +L+   CK    + A+ L  ++ E GL+   
Sbjct: 197 CRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNG----VSPSLYTYNCLIHEYCNEGKVSEGFK 301
            T+   I  L + G   +    +  MQ++G      P++ T+N ++  +C EG + E   
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L + M+      ++ +YNT + GL +  ++ E   +LD+M   GI PN+ +YN ++DG C
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTY--------------------------------- 388
                  A RL + + SNG  P  VTY                                 
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 389 --NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
             N L+ +  K G    A +++++M E+      VT  I+++   R+ ++EKA E+ S M
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 447 QKSGFS----------------------PDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
              G +                      PDV TY  LI+GLC  G ++EA K F  M   
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALR--------------------------------- 511
            L P+ V Y+  +  +CK+G    ALR                                 
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614

Query: 512 --LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILYR 568
             L+ EM E+G+ P+I +Y++ I  LC+ GK  +A  LL++ML  G + P+VS + IL +
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674

Query: 569 A 569
           A
Sbjct: 675 A 675



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 224/468 (47%), Gaps = 30/468 (6%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAG 189
           +M+++G+ P   ++N ++  + ++    D   L        V  D  ++  L+ G C  G
Sbjct: 353 EMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKG 412

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            + +A  +LN++   G  PN     +L++   K G    A+ + +K+ E        T  
Sbjct: 413 KVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCN 472

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVS----------------------PSLYTYNCLI 287
           +++ GL +NG  +   E   +M  +G +                      P + TY  LI
Sbjct: 473 IVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLI 532

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +  C  GK+ E  K F EM  + +  + VTY+T +   CK+ ++  A R+L  M+  G S
Sbjct: 533 NGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCS 592

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
             + TYN LI G    G+  + + L ++++  G  P + TYN +I    + G +K A+ L
Sbjct: 593 KTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSL 652

Query: 408 VREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSL-MQKSGFSPDVYTYGVLIHGL 465
           + EM ++G ++P+  ++ ILI +F +S D + A E++ + +   G    +Y+  ++ + L
Sbjct: 653 LHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYS--LMFNEL 710

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              G + +A +LF +  E  L   + +Y  +I   CK+G    A  LL ++ +KG   + 
Sbjct: 711 LAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDH 770

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +S+   I  L + G   +A+  L ++++L L+   S  +  YR  N+I
Sbjct: 771 SSFIPVIDGLSKRGNKQQADE-LGRIMELALEDKTS--DRTYRNGNSI 815



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 9/170 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFF--S 165
           Y ++I+   +   +  A    H+MLD G V P  ++F  L+    KS  F      F  +
Sbjct: 633 YNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVA 692

Query: 166 ENRCKVELDVYS--FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
            + C  +  +YS  F  L+ G    G L+ A E+     E        +Y  LID  CK+
Sbjct: 693 LSVCGHKEALYSLMFNELLAG----GKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKD 748

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           G ++ A  L +K+ + G      ++  +I GL K G ++   E    M+L
Sbjct: 749 GRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMEL 798


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 261/597 (43%), Gaps = 55/597 (9%)

Query: 14  LNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKI 73
           L L+ R A  P + A  LF   S       P+  S + RL+       +H AA  L+ ++
Sbjct: 11  LALLRRNAASPAV-ALRLFLHLSSAASLPPPRCTSFLARLV------AAHPAAGALLPRL 63

Query: 74  -------------ISGRITSSSFTP-RSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
                        +   ++ S   P R  +     L   +S P   + +Y  +I   L+ 
Sbjct: 64  HRHILSFPDPCPHLLALLSCSDILPLRLAIPAFRSLRALASAPPPPTPVYNRLILTALRE 123

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
              D     +  +L +G +P   T N LL  +  +   +     F     + E   +SFG
Sbjct: 124 SRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMPVRNE---FSFG 180

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           IL +G C AG    A +VL+ +  M    N+V+  +++ G CK G +E A+ L  ++   
Sbjct: 181 ILARGYCRAGRSVDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQ 236

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVS-PSLYTYNCLIHEYCNEGK 295
           GL     T+   I  L K G   D +  ++ MQ +   G+  P   T++ ++  +C+ G 
Sbjct: 237 GLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF 296

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           V E   L D MR       V +YN  + GL +  RV EA  LL +M    I PN  TYN 
Sbjct: 297 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNI 356

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           ++ G C  G+   A R+ N ++S   SP VVTY  L+ A+   GN   A+ ++ EM ++G
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+  TY +L+ S  R+    +A  +   M + G+S D     ++I GLC    +  A 
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAM 476

Query: 476 KLFNSMWE-----------------------TKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
            + + MWE                        +  P+ + Y+++I   CKEG    A + 
Sbjct: 477 GIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKK 536

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L EM  K + P+   Y + I   C+ GK   A  +L  M K G  PS   YN+L R 
Sbjct: 537 LLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG 593



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 181/422 (42%), Gaps = 63/422 (14%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +++    K  L ++A     +M   G+ P   TFNS +  + K+      +  F + +  
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED 271

Query: 171 VE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +      D  +F +++ G C+AG +++A  +++ +   GF   V  Y   + G  +NG 
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +  A  L R++    +    +TY +++ GL K G   D       ++   +SP + TY  
Sbjct: 332 VGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL------------------------ 321
           L+H YC++G ++   ++ DEM  +  A N  TYN L                        
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG 451

Query: 322 -----------ICGLCKEMRVQEAERLLDQMKMAGIS----------------------- 347
                      I GLC+  ++  A  ++D M   G +                       
Sbjct: 452 YSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCL 511

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ ITY+ LI   C  G  D+A +   ++     SP  V Y+  I  + K G + +A  +
Sbjct: 512 PDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R+ME++G  PS  TY +LI  F      ++  ++ S M++ G SP+V TY  LI   C 
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQ 631

Query: 468 KG 469
           +G
Sbjct: 632 QG 633



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++ ILI   C+ G  ++A + L ++     SP+ VIY + I G CK+G    A  + 
Sbjct: 513 DRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R + + G   +  TY +LI G  +     +  +   +M+  GVSP++ TYN LI  +C +
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQ 632

Query: 294 GKVSE 298
           G ++ 
Sbjct: 633 GMLTR 637



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I A  K    D+A     +M+   + P S  +++   F+   C   K  L     R
Sbjct: 517 YSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDT---FIHGYCKHGKTSLAIKVLR 573

Query: 169 ------CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                 C      Y+  +LI+G  E    ++  ++++++EE G SPNV+ Y SLI   C+
Sbjct: 574 DMEKKGCNPSTRTYN--LLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQ 631

Query: 223 NGDIER 228
            G + R
Sbjct: 632 QGMLTR 637


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 238/459 (51%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SII+ + K  + D+A+    +MLD  + P +  +  L+    K+   +     ++E +
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++++   F +L+        +++A E+L  +   G   + V YTSL+DG  K G   
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +  ++ E  +     TY VLI GL ++G + +    Y  M   G++P+  TYN +I
Sbjct: 536 AALNMVEEMTEKSIPFDVVTYNVLINGLLEHG-KYEAKSVYSGMIEMGLAPNQATYNIMI 594

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             YC +G++    +L++EM+  ++  + +T NTL+ GL +   +++A  +L++M + GI 
Sbjct: 595 KAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIH 654

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN++ +  L++    +G+ +   ++  QL   G   +   YN LI  F +   +K A+ +
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSV 714

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++ M   G     VTY  LI  +  S  ++KA   Y+ M   G SP++ TY +L+ GL  
Sbjct: 715 LKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLG 774

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M E  +LF+ M E  L P+   Y+ +I GY K GN   ++RL  EM  +G VP  ++
Sbjct: 775 AGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTST 834

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I    + GK  +A  LLN+M   G+ PS S Y+IL
Sbjct: 835 YNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDIL 873



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 207/396 (52%), Gaps = 1/396 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV ++  ++ G C+ G L++A E+L ++++MG  PN V YT+LID   K G    A    
Sbjct: 272 DVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQ 331

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+       T L+ GLFK+   K+  + +  +    + P+  TY  LI  YC  
Sbjct: 332 SQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKV 391

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G +     L  EM  + +  NV+TY+++I G  K+  + EA  ++ +M    I PN   Y
Sbjct: 392 GDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVY 451

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG+C AG+ + A  L+N++K +G   + V ++VL+    +      A +L++++  
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+    V YT L+D F ++     A  M   M +     DV TY VLI+GL   G   E
Sbjct: 512 RGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-E 570

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  +++ M E  L PN   YN+MI  YCK+G    AL L  EM    ++P+  + ++ + 
Sbjct: 571 AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVV 630

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L + G+  +A  +LN+M  +G+ P++ ++ +L  A
Sbjct: 631 GLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNA 666



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 228/463 (49%), Gaps = 60/463 (12%)

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
             S   CK   DV  F  LI G C+AG+++ A +++ ++ + G   ++V Y +LI+G CK
Sbjct: 138 LVSGGTCK---DVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCK 194

Query: 223 NGDIERAKMLFRKIGE---------------------LGLVATQHTYTVLICGLFKNGLQ 261
            G+ ++AK L  +I E                     L L A   TYT +I    K    
Sbjct: 195 RGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGL 254

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++    YE+M +NG  P + TY+ +++  C +G++SE  +L  EM+   V  N V Y TL
Sbjct: 255 EEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTL 314

Query: 322 I--------------C---------------------GLCKEMRVQEAERLLDQMKMAGI 346
           I              C                     GL K  + +EAE +   +    +
Sbjct: 315 IDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNL 374

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN ITY  LIDG+C  G+ ++   L  +++    +P+V+TY+ +I  ++K G    A +
Sbjct: 375 IPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAIN 434

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++++M ++ I P+   Y ILID + ++   E A ++Y+ M+ SG   +   + VL++ L 
Sbjct: 435 VMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLK 494

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               M EA +L   +    L  + V Y  ++ G+ K G    AL ++ EM EK +  ++ 
Sbjct: 495 RGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVV 554

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y+  I  L + GK+ EA+ + + M+++GL P+ + YNI+ +A
Sbjct: 555 TYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKA 596



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 194/405 (47%), Gaps = 21/405 (5%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            D  +  IL+KG C  G       +++ L   G   +V+ + +LIDG CK G++  A  L
Sbjct: 110 FDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDL 169

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLY---------- 281
             ++ + GL++   +Y  LI G  K G   K     +E  +  GV  S++          
Sbjct: 170 VERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKD 229

Query: 282 ----------TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
                     TY  +I  YC +  + E   L++EM       +VVTY++++ GLCK+ R+
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
            EA+ LL +MK  G+ PN + Y  LID    AG   +AF   +QL   G +  +V    L
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTL 349

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           +    K+   K A D+ R + +  + P+ +TYT LID + +  DME+   +   M++   
Sbjct: 350 VDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHI 409

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           +P+V TY  +I+G   KG + EA  +   M +  + PN  VY ++I GYCK G    A  
Sbjct: 410 NPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATD 469

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           L  EM   GL  N   +   +  L +  +  EAE LL  +   GL
Sbjct: 470 LYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGL 514



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 223/468 (47%), Gaps = 14/468 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI++   K     +A     +M   GV P    + +L+  + K+ S    W  F+   
Sbjct: 276 YSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGS---AWEAFA--- 329

Query: 169 CKVEL-------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           C+ +L       D+     L+ G  ++    +A ++   L ++   PN + YT+LIDG C
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYC 389

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K GD+ER + L +++ E  +     TY+ +I G  K G+  +     +KM    + P+ Y
Sbjct: 390 KVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAY 449

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            Y  LI  YC  GK      L++EM+   +  N V ++ L+  L +  R+ EAE LL  +
Sbjct: 450 VYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDV 509

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+  + + Y  L+DGF  AG+   A  +  ++        VVTYNVLI    + G  
Sbjct: 510 TSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY 569

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  +   M E G+ P++ TY I+I ++ +  +++ A E+++ M+     P   T   L
Sbjct: 570 E-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTL 628

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           + GL   G +++A  + N M    + PN V++ +++    K G +   L++  ++ + GL
Sbjct: 629 VVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGL 688

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             N  +Y++ I V C+     +A  +L  M++ G       YN L R 
Sbjct: 689 KINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRG 736



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 185/416 (44%), Gaps = 61/416 (14%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIG-ELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           PNV  +  L+   CK G++  A  L R +  E+  V    TY  +I G  ++GL    F 
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILALDLLRNVDVEVDTV----TYNTVIWGFCQHGLVNQAFG 98

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
           F   M          T N L+  +C  G    G ++ D +       +V+ +NTLI G C
Sbjct: 99  FLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYC 158

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSV 385
           K   +  A  L+++M+  G+  ++++YN LI+GFC  GE DKA  L +++ +S G   SV
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218

Query: 386 --------------------VTYNVLIRAFSKA--------------------------- 398
                               +TY  +I  + K                            
Sbjct: 219 FFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSS 278

Query: 399 --------GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
                   G    A +L+REM++ G+ P+ V YT LIDS  ++    +AF   S +   G
Sbjct: 279 IVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRG 338

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
            + D+     L+ GL      KEA  +F ++ +  L PN + Y  +I GYCK G+  R  
Sbjct: 339 MTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVE 398

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LL EM EK + PN+ +YSS I    + G   EA  ++ +ML   + P+  +Y IL
Sbjct: 399 SLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAIL 454



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 205/447 (45%), Gaps = 29/447 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+     AL    +M +  +     T+N L+  +++   ++   ++     
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIE 580

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +  +  ++ I+IK  C+ G+L+ A E+ N+++     P+ +   +L+ G  + G+IE+
Sbjct: 581 MGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK 640

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +  ++  +G+      + VL+    K+G      + +E++   G+  +   YN LI 
Sbjct: 641 AMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIV 700

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C      +   +   M       + VTYN LI G C+   V++A     QM   G+SP
Sbjct: 701 VFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSP 760

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N++TYN L+ G   AG   +   LF+++K NG +P   TY+ LI  + K GN K +  L 
Sbjct: 761 NIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLY 820

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  +G  P   TY +LI  F +   M++A E+ + MQ  G  P   TY +LI G C  
Sbjct: 821 CEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNL 880

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP---NI 525
               +  +    ++ T                        A  L+ EMN+KG VP    I
Sbjct: 881 SKHPDLDRTLKKIYRTD-----------------------AKNLITEMNDKGFVPCKSTI 917

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQML 552
           A  SST     + GK  +AE LL ++ 
Sbjct: 918 ACISSTFA---RPGKMLDAEKLLKEIF 941



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 59/364 (16%)

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           GL     + Y +M  + V P++YT+N L+H +C  G +       D +R+ +V  + VTY
Sbjct: 24  GLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNL---ILALDLLRNVDVEVDTVTY 80

Query: 319 NTLICGLCKEMRVQEA-----------------------------------ERLLDQMKM 343
           NT+I G C+   V +A                                   ER++D +  
Sbjct: 81  NTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVS 140

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G   +VI +N LIDG+C AGE   A  L  +++  G    +V+YN LI  F K G    
Sbjct: 141 GGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDK 200

Query: 404 ASDLVREM-EERGITPSE--------------------VTYTILIDSFVRSDDMEKAFEM 442
           A  L+ E+ E RG+  S                     +TYT +I ++ +   +E+A  +
Sbjct: 201 AKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARAL 260

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           Y  M  +GF PDV TY  +++GLC  G + EA +L   M +  ++PN V Y  +I    K
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFK 320

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G+++ A     ++  +G+  ++   ++ +  L +  K  EAE +   + KL L P+   
Sbjct: 321 AGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSIT 380

Query: 563 YNIL 566
           Y  L
Sbjct: 381 YTAL 384



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 24/317 (7%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+ + + P+L  +N LI+ +   G VS+   ++ EM    V  NV T+N L+   CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A   LD ++   +  + +TYN +I GFC  G  ++AF   + +         +T N+
Sbjct: 61  LILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L++ F + G +K    ++  +   G     + +  LID + ++ +M  A ++   M+K G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK---------------------LEPN 489
              D+ +Y  LI+G C +G   +A  L + + E++                     LE +
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y  +I  YCK+     A  L  EM   G +P++ +YSS +  LC+DG+  EA+ LL 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 550 QMLKLGLKPSVSLYNIL 566
           +M K+G+ P+   Y  L
Sbjct: 298 EMKKMGVDPNHVAYTTL 314


>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 202/394 (51%), Gaps = 1/394 (0%)

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           + F  L+    ++G +N +  V  Q+   G  P++   T L++   K    +    +F+K
Sbjct: 134 HVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKK 193

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + +LG+VA  H Y VL+    K+G  +   +   +M+  GV P ++TYN LI  YC +  
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
             E   + D M    VA ++VTYN+LI G  +E R++EA RL  ++K   +  N +TY  
Sbjct: 254 HFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIK-GVVMANHVTYTT 312

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           LIDG+C   + D+A RL   ++S G  P VVTYN ++R   + G  + A+ L+ EM  + 
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKK 372

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I P  +T   LI+++ + +DM  A ++   M +SG   D+Y+Y  LIHG C    +  A 
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAK 432

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +   SM E  L P    Y+ ++ G+  +       +L  E  ++GL P++A Y   I  +
Sbjct: 433 EELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRI 492

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C+  +   A+VL   M K GL     +Y  +  A
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYA 526



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 244/509 (47%), Gaps = 14/509 (2%)

Query: 25  PLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKIISGRITSSS 82
           P  ++S ++W  S    +H+ QS S  + L+L+K   H+H   A  L+ K+    + SS 
Sbjct: 60  PSLSWSFYSWTDSLPSCKHSLQS-SWKMILILTK---HNHFKTAHQLLDKLSQRELLSSP 115

Query: 83  FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
              RSL+  +      S +P   S ++  ++  + KS + + ++  F Q++  G++P   
Sbjct: 116 LVLRSLVGGV------SEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQ 169

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
               LL  ++K    D  W  F +  +  V  +++ + +L+  C ++GD  KA ++L+++
Sbjct: 170 ACTVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEM 229

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           EE G  P++  Y +LI   CK      A  +  ++   G+     TY  LI G  + G  
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRM 289

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++    + K++   V  +  TY  LI  YC    + E  +L + M  R     VVTYN++
Sbjct: 290 REATRLFRKIK-GVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSI 348

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           +  LC++ R++EA RLL +M +  I P+ IT N LI+ +C   +   A ++  ++  +G 
Sbjct: 349 LRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              + +Y  LI  F K      A + +  M E+G++P    Y+ L+D F   +  ++  +
Sbjct: 409 KLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITK 468

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
           +    +K G  PDV  Y  LI  +C    +  A  LF SM +  L  + V+Y  M + Y 
Sbjct: 469 LPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYW 528

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + G    A  L   M  + L+ N+  Y S
Sbjct: 529 RTGKVTDASALFDVMYNRRLMVNLKLYKS 557



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 148/292 (50%), Gaps = 19/292 (6%)

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRV------------------QEAERLLDQMK 342
           +L D++  RE+  + +   +L+ G+ ++  V                   ++  + +Q+ 
Sbjct: 101 QLLDKLSQRELLSSPLVLRSLVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIM 160

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ P++     L++       TD  +++F ++   G   ++  YNVL+ A SK+G+S+
Sbjct: 161 SCGLKPHLQACTVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSE 220

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L+ EMEE+G+ P   TY  LI  + +     +A  +   M++SG +PD+ TY  LI
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLI 280

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HG   +G M+EA++LF  + +  +  N V Y  +I GYC+  +   ALRL   M  +G  
Sbjct: 281 HGFSREGRMREATRLFRKI-KGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFC 339

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           P + +Y+S +  LC+DG+  EA  LL +M    ++P     N L  A   IE
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIE 391


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 6/433 (1%)

Query: 136 GVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNK 193
           GV+P   ++N +L  + ++ C  D   L+    +R +V    ++FG+  +  C  G  N+
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +L  +   G  P+ V+Y ++I   C  G +  A  L  ++  +G  A  +T+  ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G+   G  ++     ++M   G  P + TY  L+   C   +  E   +      R    
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG----RVPEL 309

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVV +NT+I G   E ++ EA  L + M + G  P+  TY+ L+ G C  G    A RL 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++  G +P+VVTY +++ +F K G       L+ EM  +G+T +   Y  +I +  + 
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             M++A  +   M+  G +PD+ +Y  +I+ LC    M+EA  +F ++ E  +  N + Y
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I    ++G    A+RL  EM   G   ++ SY+  I  +C+DG    + VLL +M +
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 554 LGLKPSVSLYNIL 566
            G+KP+   YNIL
Sbjct: 550 KGIKPNNVSYNIL 562



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 253/553 (45%), Gaps = 54/553 (9%)

Query: 27  KAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII-SGRITSSSFT 84
           +A  L +   R+ G+Q + +S +++L +L     +  HA A  L  +++   R+  ++FT
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTFT 177

Query: 85  ---PRSLLCHLTQLFPSSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
                  LC L +   + +          V  + LY+++I A     L DQ         
Sbjct: 178 FGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHA-----LCDQG-------- 224

Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNK 193
             GV   +   N +L+     C+ D                V +F  +++G C  G + +
Sbjct: 225 --GVTEAATLLNEMLLM---GCAAD----------------VNTFDDVVRGMCGLGRVRE 263

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +++++   G  P V+ Y  L+ G C+    + A+ +  ++ EL +V     +  +I 
Sbjct: 264 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFNTVIG 319

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G    G   +  E YE M L G  P  +TY+ L+H  C  G++S   +L  EM  +  A 
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAP 379

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVVTY  ++   CK     +   LL++M   G++ N   YN +I   C  G  D+A  L 
Sbjct: 380 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 439

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++S G +P + +YN +I         + A  +   + E G+  + +TY  +I + +R 
Sbjct: 440 QEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRD 499

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
              + A  +   M   G S DV +Y  LI  +C  GN+  +  L   M E  ++PN+V Y
Sbjct: 500 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 559

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I   CKE     AL L  +M  +GL P+I +Y++ I  LC+ G    A  LL ++  
Sbjct: 560 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN 619

Query: 554 LGLKPSVSLYNIL 566
             + P +  YNIL
Sbjct: 620 ENVHPDIITYNIL 632



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 160/306 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++ IL+ G C+ G ++ A  +L ++E+ GF+PNVV YT ++   CKNG  +  + L 
Sbjct: 345 DAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL      Y  +I  L K+G   +     ++M+  G +P + +YN +I+  CN 
Sbjct: 405 EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ E   +F+ +    V  N +TYNT+I  L ++ R Q+A RL  +M + G S +V++Y
Sbjct: 465 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSY 524

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  D++  L  ++   G  P+ V+YN+LI    K    + A +L ++M  
Sbjct: 525 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 584

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P  VTY  LI+   +   M  A  +   +      PD+ TY +LI   C    + +
Sbjct: 585 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDD 644

Query: 474 ASKLFN 479
           A+ L N
Sbjct: 645 AAMLLN 650



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A+    +M   G  P   T+  +L    K+  +D       E   K + L+   +  +I 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C+ G +++A  ++ ++   G +P++  Y ++I   C N  +E A+ +F  + E G+VA
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-------------------------- 277
              TY  +I  L ++G  +D     ++M L+G S                          
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 278 ---------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
                    P+  +YN LI E C E +V +  +L  +M ++ +A ++VTYNTLI GLCK 
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             +  A  LL+++    + P++ITYN LI   C     D A  L N+
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S+ Y  +I A  K    D+A+    +M   G  P   ++N+++  +  +   ++    F 
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF- 474

Query: 166 ENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           EN  +  V  +  ++  +I      G    A  +  ++   G S +VV Y  LI   CK+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+++R+ +L  ++ E G+     +Y +LI  L K    +D  E  ++M   G++P + TY
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 594

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+  C  G +     L +++ +  V  +++TYN LI   CK   + +A  LL++  M
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR-AM 653

Query: 344 AGISP 348
           A + P
Sbjct: 654 AAVCP 658


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 205/396 (51%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V++ VYS  I+++G C  G++ K+ +++ +    G  P    Y ++I+   K  D    +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            + + + + G+V  + TYT+L+    KNG   D  + +++M+  G+   ++ Y  LI   
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C +G +   F LFDE+  + ++ +  TY  LI G+CK   +  AE L+++M+  G++   
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + +N LIDG+C  G  D+A  +++ ++  G    V T N +   F++      A   +  
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M E G+  S V+YT LID + +  ++E+A  ++  M   G  P+  TY V+I+  C +G 
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           +KEA KL  +M    ++P+   Y  +I G C   N   A+RL  EM  KGL  N  +Y+ 
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            I  L + GK  EA  L ++M + G      +Y  L
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 35/370 (9%)

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           +FR++ + G+  T ++ T+++ GL + G  +   +  ++  + G+ P  YTYN +I+ Y 
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +   S    +   M+   V  N VTY  L+    K  ++ +AE+L D+M+  GI  +V 
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            Y  LI   C  G   +AF LF++L   G SPS  TY  LI    K G    A  L+ EM
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT-------------- 457
           + +G+  ++V +  LID + R   +++A  +Y +M++ GF  DV+T              
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450

Query: 458 ---------------------YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
                                Y  LI   C +GN++EA +LF  M    ++PN + YN+M
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I+ YCK+G    A +L   M   G+ P+  +Y+S I   C      EA  L ++M   GL
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570

Query: 557 KPSVSLYNIL 566
             +   Y ++
Sbjct: 571 DQNSVTYTVM 580



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 134/271 (49%)

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           Y + G   EG ++FD M  + ++ +  +    +    K  R+     +  +M  +G+   
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V +   +++G C  GE +K+ +L  +    G  P   TYN +I A+ K  +      +++
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M++ G+  ++VTYT+L++  V++  M  A +++  M++ G   DV+ Y  LI   C KG
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           NMK A  LF+ + E  L P+   Y  +I G CK G    A  L+ EM  KG+      ++
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           + I   C+ G   EA ++ + M + G +  V
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 126/276 (45%), Gaps = 21/276 (7%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIIL------------RLLLSKMSSHSHAAAQTLILKII 74
           +AF LF+  + +GL  +  +   ++             +L+++M S      Q +   +I
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS--DQALFYFHQM 132
            G      +  + ++   + ++        ++ ++     A   +RL   D+A  +  +M
Sbjct: 407 DG------YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDL 191
           ++ GV+  + ++ +L+    K  + ++    F E   K V+ +  ++ ++I   C+ G +
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
            +A ++   +E  G  P+   YTSLI G C   +++ A  LF ++G  GL     TYTV+
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           I GL K G   + F  Y++M+  G +     Y  LI
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 234/462 (50%), Gaps = 1/462 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y S+I A+   R  ++AL    +M + G+     T++ L+    K    +    +F 
Sbjct: 324 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 383

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E + +   L+   +G +I   C+A ++ +A  ++ ++EE G    + IY +++DG    G
Sbjct: 384 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 443

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E+  ++F ++ E G   +  +Y  LI    K G      E  + M++ G+  ++ TY+
Sbjct: 444 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 503

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ +      +  F +F+++    +  +VV YN +I   C    +  A R + +M+  
Sbjct: 504 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 563

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P   T+  +I GF  +G+  +A  +F+ ++ +G  P+V T+N LI    +    + A
Sbjct: 564 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKA 623

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +++ EM   GI+P+E TYT ++  +    D  KAFE ++ ++  G   DVYTY  L+  
Sbjct: 624 VEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKA 683

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G M+ A  +   M   K+  N  VYN++I G+ + G+ + A  L+ +M ++G+ P+
Sbjct: 684 CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPD 743

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I +Y+S I   C+ G    A   + +M  +G+KP++  Y  L
Sbjct: 744 IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTL 785



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 206/422 (48%), Gaps = 1/422 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH ++    QA     +M + G+    + +++++       + +K  + F   
Sbjct: 396 IYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRL 455

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C     V S+G LI    + G ++KA EV   +E  G   N+  Y+ LI+G  +  D 
Sbjct: 456 KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDW 515

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + GL      Y  +I      G         ++MQ     P+  T+  +
Sbjct: 516 ANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPI 575

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +   G +    ++FD MR       V T+N LI GL ++ ++++A  +LD+M +AGI
Sbjct: 576 IHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGI 635

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN  TY  ++ G+   G+T KAF  F +LK+ G    V TY  L++A  K+G  + A  
Sbjct: 636 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 695

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A E+   M++ G  PD++TY   I+  C
Sbjct: 696 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACC 755

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A+K    M    ++PN   Y  +I G+ +     +AL+   EM   GL P+ A
Sbjct: 756 KAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKA 815

Query: 527 SY 528
            Y
Sbjct: 816 VY 817



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 1/366 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +AL     M  +G++    T++ L+   ++   +   +  F +  
Sbjct: 467 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 526

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ DV  +  +I+  C  G++++A   + ++++    P    +  +I G  ++GD+ 
Sbjct: 527 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMR 586

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +F  +   G + T HT+  LI GL +    +   E  ++M L G+SP+ +TY  ++
Sbjct: 587 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 646

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y + G   + F+ F +++   +  +V TY  L+   CK  R+Q A  +  +M    I 
Sbjct: 647 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 706

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K  G  P + TY   I A  KAG+ + A+  
Sbjct: 707 RNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKT 766

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++EME  G+ P+  TYT LI  + R+   EKA + +  M+ +G  PD   Y  L+  L  
Sbjct: 767 IQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLS 826

Query: 468 KGNMKE 473
           + ++ E
Sbjct: 827 RASVAE 832



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 195/424 (45%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++      GD++ A      +   G  P   +YTSLI       D+E A    RK+ 
Sbjct: 292 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 351

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  +  TY++L+ G  K    +    ++++ +    + +   Y  +I+ +C    ++
Sbjct: 352 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 411

Query: 298 EGFKLFDEMRHREVACNVVTYNTLI---------------------CGLCKEM------- 329
           +   L  EM    +   +  Y+T++                     CG    +       
Sbjct: 412 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 471

Query: 330 -------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
                  +V +A  +   M++AGI  N+ TY+ LI+GF    +   AF +F  +  +G  
Sbjct: 472 NLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLK 531

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VV YN +IRAF   GN   A   V+EM++    P+  T+  +I  F RS DM +A E+
Sbjct: 532 PDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 591

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M+ SG  P V+T+  LI GL  K  M++A ++ + M    + PN+  Y  ++ GY  
Sbjct: 592 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 651

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A     ++  +GL  ++ +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 652 LGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFV 711

Query: 563 YNIL 566
           YNIL
Sbjct: 712 YNIL 715



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 7/374 (1%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +AFE + +     F   V  Y        + GD+  A+  F  +   G+  T H YT LI
Sbjct: 279 QAFERIKKPSRKEFGLMVTYY-------ARRGDMHHARGTFESMRARGIEPTSHVYTSLI 331

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                    ++      KM+  G+  SL TY+ L+  +            F E + R   
Sbjct: 332 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 391

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N + Y  +I   C+   + +AE L+ +M+  GI   +  Y+ ++DG+   G  +K   +
Sbjct: 392 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 451

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F++LK  G +PSV++Y  LI  + K G    A ++ + ME  GI  +  TY++LI+ FVR
Sbjct: 452 FDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVR 511

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D   AF ++  + K G  PDV  Y  +I   C  GNM  A +    M + +  P    
Sbjct: 512 LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRT 571

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +  +I G+ + G+  RAL +   M   G +P + ++++ I  L +  +  +A  +L++M 
Sbjct: 572 FMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMS 631

Query: 553 KLGLKPSVSLYNIL 566
             G+ P+   Y  +
Sbjct: 632 LAGISPNEHTYTTI 645



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A    + M+  GI P    Y  LI  +    + ++A     ++K  G   S+VTY++
Sbjct: 305 MHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSI 364

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  F+K  +++ A    +E +ER  T + + Y  +I +  ++ +M +A  +   M++ G
Sbjct: 365 LVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEG 424

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
               +  Y  ++ G  + GN ++   +F+ + E    P+ + Y  +I  Y K G   +AL
Sbjct: 425 IDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKAL 484

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   M   G+  N+ +YS  I    +   W  A  +   ++K GLKP V LYN + RA
Sbjct: 485 EVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 543



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 18/222 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +I+  +     + +A  YF ++   G+     T+ +LL    KS           E +
Sbjct: 642 YTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMS 701

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K+  + + + ILI G    GD+ +A E++ Q+++ G  P++  YTS I+ CCK GD++
Sbjct: 702 SQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 761

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA    +++  +G+     TYT LI G  +  L +   + +++M+  G+ P    Y+CL+
Sbjct: 762 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 821

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
               +   V+E +                 Y+ ++ G+C+EM
Sbjct: 822 TSLLSRASVAEEY----------------IYSGVV-GICREM 846


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 224/464 (48%), Gaps = 7/464 (1%)

Query: 112 IIDAHLKSRLSDQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---- 166
           I  A+ K+ L ++A+  F +M  +   +    +FNS+L  +I+   F +   F++     
Sbjct: 131 IFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGA 190

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +  +V +F ++IK  C+ G ++ A +V   +      P+V  Y +L+DG CK   I
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  ++   G   +  T+ VLI GL K G      +  + M L G  P+  TYN L
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH  C +GK+ +   L D M   +   NVVTY T+I GL K+ R  +   +L  M+  G 
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY 370

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
             N   Y+ LI G    G++ +A  LF ++   G   + + Y+ +I    + G    A +
Sbjct: 371 CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVE 430

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ EM  +G TP+  T + L+  F  + +  +A E++  M K  F+ +   Y VLIHGLC
Sbjct: 431 VLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLC 490

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL--VPN 524
             G +KEA  ++  M     +P+ V Y+ MI G    G    A++L  EM  +G    P+
Sbjct: 491 KDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPD 550

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           + +Y+  +  LC+      A  LLN ML  G  P +    I  R
Sbjct: 551 VVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR 594



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 198/474 (41%), Gaps = 66/474 (13%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I A  K  L D A+  F  M      P   T+ +L+  + K+   D+      E    +
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE----M 260

Query: 172 ELD-----VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++D       +F +LI G C+ GDL++A ++++ +   G  PN V Y +LI G C  G +
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L  ++     V    TY  +I GL K G   DG      M+  G   + Y Y+ L
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I     EGK  E   LF EM  +    N + Y+ +I GLC++ +  +A  +L +M   G 
Sbjct: 381 ISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440

Query: 347 SPNVIT-----------------------------------YNKLIDGFCDAGETDKAFR 371
           +PN  T                                   Y+ LI G C  G+  +A  
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT--PSEVTYTILIDS 429
           ++ Q+   G  P VV Y+ +I   S AG  + A  L  EM  +G    P  VTY IL+++
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNT 560

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP- 488
             +   + +A ++ + M   G  PD+ T                   +F  M   KL+P 
Sbjct: 561 LCKQSSISRAIDLLNSMLDRGCDPDLVT-----------------CTIFLRMLREKLDPP 603

Query: 489 --NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
                  + ++    K      A +++  M +K L P  ++++  +  LC+  K
Sbjct: 604 QDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKK 657


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 240/517 (46%), Gaps = 50/517 (9%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLS-DQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKSCS 156
           SS   T   L   I++ H    L  + AL  F ++L    RP S + FNS+L  V ++ S
Sbjct: 6   SSGRRTCLELERIILNRHRSGSLGREDALNLFDELLPQA-RPASVHAFNSVLTVVARADS 64

Query: 157 FDKGW--------LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
                        LF +  R  V +     GILI+  C  G L+ AF       + G+  
Sbjct: 65  SSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRV 124

Query: 209 NVVIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
             V    LI G C     + A  M+FR++ ELG      +Y  LI GL      ++  E 
Sbjct: 125 QNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 184

Query: 268 YEKMQLNG---VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
              M  +G    SP++ +YN +I  +  EG+V + + LF EM  + +  +VVTYN+LI G
Sbjct: 185 LIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG 244

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
           LCK   + +A  +L  M   G+ P+  TYN +I G+C  G+ ++A RL  ++  +G  P 
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY--------------------- 423
           VVTY++LI+ + K G    A  +   M  +G  P+   Y                     
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364

Query: 424 --------------TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                          ILI ++ +   ++KA   ++ M+++G  PDV +Y  +IH LC  G
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +++A   FN M    L PN + +  +I G C  G   +   L  EM  +G+ P+    +
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 484

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           + +  LC++G+  EA+   + ++ +G+KP V  YN L
Sbjct: 485 TIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 227/483 (46%), Gaps = 3/483 (0%)

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
           LL H+T     + +P   S  Y ++ID   K    D+A F FH+M+  G+ P   T+NSL
Sbjct: 184 LLIHMTADGGYNCSPNVVS--YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSL 241

Query: 148 LIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           +  + K+ + DK          K V  D  ++ I+I+G C  G L +A  +L ++   G 
Sbjct: 242 IDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 301

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
            P+VV Y+ LI   CK G    A+ +F  +   G       Y +L+ G    G   D  +
Sbjct: 302 QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 361

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
             + M  +G+      +N LI  Y   G V +    F EMR   +  +VV+Y+T+I  LC
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           K  RV++A    +QM   G+SPN+I++  LI G C  GE  K   L  ++ + G  P  +
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
             N ++    K G    A D    +   G+ P  V+Y  LID +     M+++ +    M
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
              G  PD +TY  L++G    G +++A  L+  M+   ++   +  N+M+ G  + G  
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRI 601

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A  L  +M ++G    I +Y++ +G LC++    EA  +   +     +  V  ++I+
Sbjct: 602 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIV 661

Query: 567 YRA 569
             A
Sbjct: 662 INA 664



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 226/513 (44%), Gaps = 62/513 (12%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           VT ++L + + D +   R  D     F +M + G  P   ++N+L+          KG  
Sbjct: 127 VTLNQLIKGLCDGN---RTDDAMDMVFRRMPELGYTPDVFSYNALI----------KGLC 173

Query: 163 FFSENRCKVEL--------------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
              +++  +EL              +V S+  +I G  + G+++KA+ + +++   G  P
Sbjct: 174 VEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPP 233

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV Y SLIDG CK   +++A  + + + + G++    TY ++I G    G  ++     
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY---------- 318
           +KM  +G+ P + TY+ LI  YC  G+ +E   +FD M  +    N   Y          
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 353

Query: 319 -------------------------NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
                                    N LIC   K   V +A     +M+  G+ P+V++Y
Sbjct: 354 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 413

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           + +I   C  G  + A   FNQ+ S G SP+++++  LI      G  K   +L  EM  
Sbjct: 414 STVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 473

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RGI P  +    ++D+  +   + +A + + ++   G  PDV +Y  LI G C  G M E
Sbjct: 474 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDE 533

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           + K  + M    L P+   YN ++ GY K G    AL L  EM  K +     + +  + 
Sbjct: 534 SIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLH 593

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            L Q G+   A  L  +M+  G +  +  YN +
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 186/380 (48%), Gaps = 1/380 (0%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           + R +  +I A+ K    D+A+  F +M  +G+RP   ++++++  + K+   +     F
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHF 433

Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           ++   + +  ++ SF  LI G C  G+  K  E+  ++   G  P+ +   +++D  CK 
Sbjct: 434 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G +  A+  F  +  +G+     +Y  LI G    G   +  +  ++M   G+ P  +TY
Sbjct: 494 GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTY 553

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N L++ Y   G+V +   L+ EM  ++V    +T N ++ GL +  R+  A  L  +M  
Sbjct: 554 NSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVD 613

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G    + TYN ++ G C+    D+A R+F  L+S      V T++++I A  K G    
Sbjct: 614 RGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDE 673

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   M  RG  P  +TY+++I S +    +E++  ++  M+K+G + D +   +++ 
Sbjct: 674 AKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVR 733

Query: 464 GLCMKGNMKEASKLFNSMWE 483
            L  KG+++ A      + E
Sbjct: 734 RLLEKGDVRRAGTYLTKIDE 753



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 10/387 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y ++I    K+   + A+++F+QM+  G+ P   +F SL+  +   CS  + W     L 
Sbjct: 413 YSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL---CSIGE-WKKVEELA 468

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           F      +  D      ++   C+ G + +A +  + +  +G  P+VV Y +LIDG C  
Sbjct: 469 FEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFV 528

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G ++ +     ++  +GL     TY  L+ G FKNG  +D    Y +M    V     T 
Sbjct: 529 GKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS 588

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N ++H     G++    +L+ +M  R     + TYNT++ GLC+   V EA R+ + ++ 
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
                +V T++ +I+     G  D+A  LF+ +   G  P V+TY+++I++  + G  + 
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           + +L   ME+ G         I++   +   D+ +A    + + +  FS +  T  +LI 
Sbjct: 709 SDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIP 768

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPND 490
            +  K   KE  K     + + ++P D
Sbjct: 769 IVSEKKYQKEV-KFLPEKYHSFMQPRD 794


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 191/393 (48%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +V  + ++I G C+ GDL +A  V  +L+  GF P +  Y +LIDG CK G  +    L 
Sbjct: 239 NVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLL 298

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++  +GL      +  +I   +K GL     E    M   G  P + TYN LI+  C+ 
Sbjct: 299 NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSG 358

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ E  +  +  + R +  N  +Y  L+   CK+     A  +L ++   G  P++++Y
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
              I G    GE D A  +  ++   G  P    YNVL+    K G    A  L+ EM +
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
             + P    Y  L+D F+R+++++KA E++ ++   G  P V  Y V+I GLC  G M +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTD 538

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A    N M      P++  ++ +I GY K+ +   AL++ G+M ++   PN+ +Y+S I 
Sbjct: 539 AVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLIN 598

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             C+      AE +   M    L+P+V  Y IL
Sbjct: 599 GFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 219/497 (44%), Gaps = 48/497 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
            Y  IID + K     +A   F ++   G  P   T+ +L+    K+  F       +E 
Sbjct: 242 FYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEM 301

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N   + ++V  F  +I    + G ++KA E++  + EMG  P++  Y  LI+  C  G I
Sbjct: 302 NVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRI 361

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A+    +  E  L+  + +YT L+    K G      +   K+   G  P L +Y   
Sbjct: 362 KEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAF 421

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH     G++     + ++M  + V  +   YN L+ GLCK+ R   A+ LL +M    +
Sbjct: 422 IHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNL 481

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+   Y  L+DGF    E DKA  LF  + S G  P VV YNV+I+   K G    A  
Sbjct: 482 QPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVS 541

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
            V +M+     P E T++ +ID +V+  D++ A +M+  M K  + P+V  Y  LI+G C
Sbjct: 542 YVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFC 601

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL------------- 513
              +M  A K+F +M    LEPN V Y ++I G+ K G   +A                 
Sbjct: 602 KIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDT 661

Query: 514 ---------------------GEMNEKGLVPN-------------IASYSSTIGVLCQDG 539
                                 E N++ L+ +             IA+Y+S I  LC+ G
Sbjct: 662 TFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHG 721

Query: 540 KWPEAEVLLNQMLKLGL 556
               A++L  +ML+ G 
Sbjct: 722 MVDTAQLLQTKMLRKGF 738



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 197/390 (50%), Gaps = 7/390 (1%)

Query: 187 EAGDLNKAFEVLNQLEEM-GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG----- 240
           E G ++KA ++   + E+    P VV   SL++   KNG ++ A  L+ K+ E G     
Sbjct: 140 EYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGL 199

Query: 241 -LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            LV   ++  +++ GL   G  ++G +  +    NG  P++  YN +I  YC +G +   
Sbjct: 200 DLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRA 259

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
            ++F+E++ +     + TY  LI G CK  + Q  ++LL++M + G++ NV  +N +ID 
Sbjct: 260 TRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDA 319

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
               G  DKA  +   +   G  P + TYN+LI      G  K A + +   +ER + P+
Sbjct: 320 KYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPN 379

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
           + +YT L+ ++ +  D   A +M   + ++G  PD+ +YG  IHG    G +  A  +  
Sbjct: 380 KFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVRE 439

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M E  + P+  +YN+++ G CK+G    A  LL EM +  L P+   Y++ +    ++ 
Sbjct: 440 KMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNN 499

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  +A  L   ++  G+ P V  YN++ + 
Sbjct: 500 ELDKATELFEVVMSKGIDPGVVGYNVMIKG 529



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 202/492 (41%), Gaps = 49/492 (9%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           +++ SIIDA  K  L D+A      M + G  P   T+N L+ F        +   F   
Sbjct: 311 KVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLER 370

Query: 167 NRCKVEL------------------------------------DVYSFGILIKGCCEAGD 190
            + +  L                                    D+ S+G  I G    G+
Sbjct: 371 AKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGE 430

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           ++ A  V  ++ E G  P+  IY  L+ G CK G    AK+L  ++ +L L    + Y  
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYAT 490

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ G  +N       E +E +   G+ P +  YN +I   C  GK+++     ++M+   
Sbjct: 491 LVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIAN 550

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
            A +  T++T+I G  K+  +  A ++  QM      PNV+ Y  LI+GFC   +  +A 
Sbjct: 551 HAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAE 610

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++F  ++S    P+VVTY +LI  FSK G  + A+     M      P++ T+  LI+  
Sbjct: 611 KVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670

Query: 431 V------------RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
                          +D     + ++ M   G+S  + TY  +I  LC  G +  A  L 
Sbjct: 671 TNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQ 730

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M       + V ++ ++ G C+ G S     ++     K        YS  +     D
Sbjct: 731 TKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYD 790

Query: 539 GKWPEAE-VLLN 549
           GK  EA  +LLN
Sbjct: 791 GKPSEASYILLN 802



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 30/258 (11%)

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N V Y++L+  + K     E E +L+ MK     P +   N +I  + + G  DKA ++F
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 374 NQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             + +     P VV  N L+    K G   +A +L  +M ERG    +    +++D+   
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERG---GDHGLDLVVDN--- 205

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                                  Y+  +++ GLC  G ++E  KL +  W     PN V 
Sbjct: 206 -----------------------YSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVF 242

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN++I GYCK+G+  RA R+  E+  KG +P + +Y + I   C+ GK+   + LLN+M 
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMN 302

Query: 553 KLGLKPSVSLYNILYRAK 570
            +GL  +V ++N +  AK
Sbjct: 303 VMGLNVNVKVFNSIIDAK 320



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 7/275 (2%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGF 360
           + ++M++R     +   N++IC   +   V +A ++   + ++    P V+  N L++  
Sbjct: 115 VLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCL 174

Query: 361 CDAGETDKAFRLFNQLKSNGQSPS----VVTYNVLI--RAFSKAGNSKMASDLVREMEER 414
              G+ D A  L++++   G        V  Y+++I  +     G  +    L+ +    
Sbjct: 175 VKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGN 234

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G  P+ V Y ++ID + +  D+++A  ++  ++  GF P + TYG LI G C  G  +  
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
            +L N M    L  N  V+N +I    K G   +A  ++  M E G  P+I +Y+  I  
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINF 354

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            C  G+  EAE  L +  +  L P+   Y  L  A
Sbjct: 355 SCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 198/409 (48%), Gaps = 16/409 (3%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK----------- 222
           +V S+ ++I G  + G+++KA+ + +++   GF PN+V Y S+IDG CK           
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 223 -----NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
                 G +E A  L +K+   GL     TY++LI    K G   +    ++ M   G +
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P  YTY  L+H Y  +G + +   L   M    +      +N LI    K   + +A   
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M+  G SPNV+TY  +ID  C AG  + A   F+Q+ S G SP ++T+  LI     
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  K    L  EM  RGI P+ +    ++DS  +   + +A + +  +   G  PDV +
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVS 437

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y +LI G C+ G M E+ KL   M    L P++V Y+ ++ GYCK G    AL L  EM 
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            K + PN  +Y+  +  L   G+   A     +++  G++  ++ YNI+
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 213/458 (46%), Gaps = 18/458 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+   K    D+A   FH+ML  G  P   T+NS++  + K+ + DK         
Sbjct: 142 YNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE------- 194

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                       +++   + G L +A  +L ++   G  P+VV Y+ LID  CK G    
Sbjct: 195 -----------AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTE 243

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ +F  +   G     +TY  L+ G    G   D  +    M  +G+    + +N LI 
Sbjct: 244 ARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIR 303

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            Y     + +    F EMR +  + NVVTY T+I  LCK  RV++A     QM   G+SP
Sbjct: 304 AYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           ++IT+  LI G C  GE  K  +L  ++ + G  P+ +  N ++ +  K G    A D  
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            ++   G+ P  V+YTILID +     M+++ ++   M   G  PD  TY  L++G C  
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKN 483

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + +A  L+  M+   ++PN + YN+++ G    G    A     ++ + G+   I +Y
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTY 543

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +G LC++    EA  +   +     +  V  +NI+
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 1/444 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y  +ID + K     +A   F  M+  G  P + T+ +LL  +  K    D   L     
Sbjct: 228 YSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMI 287

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  + L+ + F ILI+   +   L+KA     ++ + GFSPNVV YT++ID  CK G +E
Sbjct: 288 QDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVE 347

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A   F ++   GL     T+T LI GL   G  K   +   +M   G+ P+    N ++
Sbjct: 348 DAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIM 407

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG+V E    FD++ H  V  +VV+Y  LI G C + ++ E+ +LL +M   G+ 
Sbjct: 408 DSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLR 467

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +TY+ L++G+C  G  D A  L+ ++ S    P+ +TYN+++     AG    A + 
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             ++ + GI     TY I++     +  +++A  M+  ++   F  +V T+ ++I GL  
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +A  LF+++  + L P+ ++Y +MI  + +EG    +  L   M + G   N  +
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRT 647

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQM 551
            ++ +  L + G    A   L ++
Sbjct: 648 LNAIVRKLLEKGDVRRAGTYLTKI 671



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 165/365 (45%), Gaps = 65/365 (17%)

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC----------- 313
           F    ++ +N ++    T+  LI  +CN G +   F L +E R    A            
Sbjct: 79  FNTMAQVGVNKLATDACTFGILIRCFCNVGLLD--FALEEESRGSRAAVHMMADDGYNCP 136

Query: 314 -NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC----------- 361
            NV++YN +I GL KE  V +A  L  +M   G  PN++TYN +IDG C           
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 362 -----DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
                D G+ ++A RL  ++   G  P VVTY++LI  + K G    A ++   M  RG 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 417 TPSEVTY-----------------------------------TILIDSFVRSDDMEKAFE 441
            P   TY                                    ILI ++ +++ ++KA  
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
            +  M++ GFSP+V TY  +I  LC  G +++A   F+ M    L P+ + +  +I G C
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
             G   +  +L  EM  +G+ PN    ++ +  LC++G+  EA    +Q++ +G+KP V 
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 562 LYNIL 566
            Y IL
Sbjct: 437 SYTIL 441



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 6/393 (1%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S N VT    Y ++ID   K+   + A+ +F QM+  G+ P   TF SL+  +     + 
Sbjct: 327 SPNVVT----YTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382

Query: 159 K-GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           K   L F      +  +      ++   C+ G + +A +  +Q+  +G  P+VV YT LI
Sbjct: 383 KVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILI 442

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG C +G ++ +  L  ++  +GL     TY+ L+ G  KNG   D    Y +M    V 
Sbjct: 443 DGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVK 502

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TYN ++H   + G+V    + + ++    +   + TYN ++ GLC+   V EA R+
Sbjct: 503 PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRM 562

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
              ++       V T+N +I G    G    A  LF+ +  +G  P  + Y ++I++  +
Sbjct: 563 FQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIE 622

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + + +L   ME+ G T +  T   ++   +   D+ +A    + + +  +S +  T
Sbjct: 623 EGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST 682

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
             +LI  +  +   KE  K     +++ +EP D
Sbjct: 683 AVLLISIVSERKYQKEV-KFLPEKYQSFMEPRD 714


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 233/460 (50%), Gaps = 3/460 (0%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DV 175
           K+++ ++AL  F+Q+     RP ++T+NS+++ +++    +K    ++E   +V    D 
Sbjct: 165 KAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDT 224

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            ++  LI    +    + A  + ++++E G  P   IYT+L+    K G +E A  L ++
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKE 284

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +     + T  TYT LI GL K+G  +D +  Y+ M  +G  P +   N LI+       
Sbjct: 285 MRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNH 344

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCK-EMRVQEAERLLDQMKMAGISPNVITYN 354
           + +  KLFDEM+    A NVVTYNT+I  L + +  + EA    ++MK  GI P+  TY+
Sbjct: 345 LRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYS 404

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LIDG+C     +KA  L  ++   G  P    Y  LI     A    +A++L +E++E 
Sbjct: 405 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKEN 464

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
               S   Y ++I  F +   + +A  +++ M+K G +PDVY Y  L+ G+     M EA
Sbjct: 465 CGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEA 524

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             LF +M E    P+   +N+++ G  + G    AL +  +M    + P++ S+++ +G 
Sbjct: 525 FSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGC 584

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           L + G + EA  L+ +M   G +  +  Y+ +  A   ++
Sbjct: 585 LSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVD 624



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 158/329 (48%), Gaps = 2/329 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I    KS   + A   +  ML  G +P     N+L+  + +S         F E +
Sbjct: 297 YTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMK 356

Query: 169 C-KVELDVYSFGILIKGCCEA-GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
                 +V ++  +IK   EA   L++A     ++++ G  P+   Y+ LIDG CK   +
Sbjct: 357 LLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRV 416

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A +L  ++ E G       Y  LI  L          E +++++ N    S   Y  +
Sbjct: 417 EKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVM 476

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  +   G+++E   LF+EM+      +V  YN L+ G+ +  R+ EA  L   M+  G 
Sbjct: 477 IKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGC 536

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P++ ++N +++G    G    A  +F ++K++   P VV++N ++   S+AG  + A+ 
Sbjct: 537 TPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAK 596

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDD 435
           L++EM  +G     +TY+ ++++  + DD
Sbjct: 597 LMQEMSSKGFQYDLITYSSILEAVGKVDD 625



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 6/284 (2%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
            A+  F +M      P   T+N+++  +F  K+   +    F    +  +    +++ IL
Sbjct: 347 DAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSIL 406

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--GCCKNGDIERAKMLFRKIGEL 239
           I G C+   + KA  +L +++E GF P    Y SLI+  G  K  D+  A  LF+++ E 
Sbjct: 407 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDV--ANELFQELKEN 464

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
              ++   Y V+I    K G   +    + +M+  G +P +Y YN L+       ++ E 
Sbjct: 465 CGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEA 524

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           F LF  M       ++ ++N ++ GL +    + A  +  +MK + I P+V+++N ++  
Sbjct: 525 FSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGC 584

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
              AG  ++A +L  ++ S G    ++TY+ ++ A  K  + KM
Sbjct: 585 LSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDCKM 628



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 7/299 (2%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  LI          E +K   +M     A      + ++  L K   V  A  +  Q+
Sbjct: 120 TYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQV 179

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS-PSVVTYNVLIRAFSKAGN 400
           K     P   TYN +I      G  +K   L+N++ S     P  VTY+ LI AF+K   
Sbjct: 180 KGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNR 239

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A  L  EM+E G+ P+   YT L+  + +   +E+A  +   M+       V+TY  
Sbjct: 240 DDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTE 299

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           LI GL   G +++A   + +M +   +P+ V+ N +I    +  +   A++L  EM    
Sbjct: 300 LIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLN 359

Query: 521 LVPNIASYSSTIGVLCQDGKWP--EAEVLLNQMLKLGLKPSVSLYNIL---YRAKNNIE 574
             PN+ +Y++ I  L +  K P  EA     +M K G+ PS   Y+IL   Y   N +E
Sbjct: 360 CAPNVVTYNTIIKSLFE-AKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVE 417



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 5/152 (3%)

Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
           + +R+Y  +I    K    ++A+  F++M   G  P    +N+L+  ++++   D+ +  
Sbjct: 468 SSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSL 527

Query: 164 F---SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
           F    EN C    D+ S  I++ G    G    A E+  +++     P+VV + +++   
Sbjct: 528 FRTMEENGCTP--DINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCL 585

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            + G  E A  L +++   G      TY+ ++
Sbjct: 586 SRAGLFEEAAKLMQEMSSKGFQYDLITYSSIL 617


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 234/462 (50%), Gaps = 1/462 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y S+I A+   R  ++AL    +M + G+     T++ L+    K    +    +F 
Sbjct: 303 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 362

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E + +   L+   +G +I   C+A ++ +A  ++ ++EE G    + IY +++DG    G
Sbjct: 363 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 422

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E+  ++F ++ E G   +  +Y  LI    K G      E  + M++ G+  ++ TY+
Sbjct: 423 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 482

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ +      +  F +F+++    +  +VV YN +I   C    +  A R + +M+  
Sbjct: 483 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 542

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P   T+  +I GF  +G+  +A  +F+ ++ +G  P+V T+N LI    +    + A
Sbjct: 543 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKA 602

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +++ EM   GI+P+E TYT ++  +    D  KAFE ++ ++  G   DVYTY  L+  
Sbjct: 603 VEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKA 662

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G M+ A  +   M   K+  N  VYN++I G+ + G+ + A  L+ +M ++G+ P+
Sbjct: 663 CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPD 722

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I +Y+S I   C+ G    A   + +M  +G+KP++  Y  L
Sbjct: 723 IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTL 764



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 206/422 (48%), Gaps = 1/422 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH ++    QA     +M + G+    + +++++       + +K  + F   
Sbjct: 375 IYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRL 434

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C     V S+G LI    + G ++KA EV   +E  G   N+  Y+ LI+G  +  D 
Sbjct: 435 KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDW 494

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + GL      Y  +I      G         ++MQ     P+  T+  +
Sbjct: 495 ANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPI 554

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +   G +    ++FD MR       V T+N LI GL ++ ++++A  +LD+M +AGI
Sbjct: 555 IHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGI 614

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SPN  TY  ++ G+   G+T KAF  F +LK+ G    V TY  L++A  K+G  + A  
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A E+   M++ G  PD++TY   I+  C
Sbjct: 675 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACC 734

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A+K    M    ++PN   Y  +I G+ +     +AL+   EM   GL P+ A
Sbjct: 735 KAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKA 794

Query: 527 SY 528
            Y
Sbjct: 795 VY 796



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 1/366 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ ++K     +AL     M  +G++    T++ L+   ++   +   +  F +  
Sbjct: 446 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 505

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ DV  +  +I+  C  G++++A   + ++++    P    +  +I G  ++GD+ 
Sbjct: 506 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMR 565

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +F  +   G + T HT+  LI GL +    +   E  ++M L G+SP+ +TY  ++
Sbjct: 566 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 625

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y + G   + F+ F +++   +  +V TY  L+   CK  R+Q A  +  +M    I 
Sbjct: 626 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 685

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K  G  P + TY   I A  KAG+ + A+  
Sbjct: 686 RNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKT 745

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           ++EME  G+ P+  TYT LI  + R+   EKA + +  M+ +G  PD   Y  L+  L  
Sbjct: 746 IQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLS 805

Query: 468 KGNMKE 473
           + ++ E
Sbjct: 806 RASVAE 811



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 195/424 (45%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++      GD++ A      +   G  P   +YTSLI       D+E A    RK+ 
Sbjct: 271 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 330

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  +  TY++L+ G  K    +    ++++ +    + +   Y  +I+ +C    ++
Sbjct: 331 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 390

Query: 298 EGFKLFDEMRHREVACNVVTYNTLI---------------------CGLCKEM------- 329
           +   L  EM    +   +  Y+T++                     CG    +       
Sbjct: 391 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 450

Query: 330 -------RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
                  +V +A  +   M++AGI  N+ TY+ LI+GF    +   AF +F  +  +G  
Sbjct: 451 NLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLK 510

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VV YN +IRAF   GN   A   V+EM++    P+  T+  +I  F RS DM +A E+
Sbjct: 511 PDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 570

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M+ SG  P V+T+  LI GL  K  M++A ++ + M    + PN+  Y  ++ GY  
Sbjct: 571 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 630

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A     ++  +GL  ++ +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 631 LGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFV 690

Query: 563 YNIL 566
           YNIL
Sbjct: 691 YNIL 694



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 173/374 (46%), Gaps = 7/374 (1%)

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +AFE + +     F   V  Y        + GD+  A+  F  +   G+  T H YT LI
Sbjct: 258 QAFERIKKPSRKEFGLMVTYY-------ARRGDMHHARGTFESMRARGIEPTSHVYTSLI 310

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
                    ++      KM+  G+  SL TY+ L+  +            F E + R   
Sbjct: 311 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 370

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N + Y  +I   C+   + +AE L+ +M+  GI   +  Y+ ++DG+   G  +K   +
Sbjct: 371 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 430

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           F++LK  G +PSV++Y  LI  + K G    A ++ + ME  GI  +  TY++LI+ FVR
Sbjct: 431 FDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVR 490

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             D   AF ++  + K G  PDV  Y  +I   C  GNM  A +    M + +  P    
Sbjct: 491 LKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRT 550

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +  +I G+ + G+  RAL +   M   G +P + ++++ I  L +  +  +A  +L++M 
Sbjct: 551 FMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMS 610

Query: 553 KLGLKPSVSLYNIL 566
             G+ P+   Y  +
Sbjct: 611 LAGISPNEHTYTTI 624



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A    + M+  GI P    Y  LI  +    + ++A     ++K  G   S+VTY++
Sbjct: 284 MHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSI 343

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           L+  F+K  +++ A    +E +ER  T + + Y  +I +  ++ +M +A  +   M++ G
Sbjct: 344 LVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEG 403

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
               +  Y  ++ G  + GN ++   +F+ + E    P+ + Y  +I  Y K G   +AL
Sbjct: 404 IDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKAL 463

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   M   G+  N+ +YS  I    +   W  A  +   ++K GLKP V LYN + RA
Sbjct: 464 EVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 522



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 1/193 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y +I+  +     + +A  YF ++   G+     T+ +LL    KS           E +
Sbjct: 621 YTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMS 680

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             K+  + + + ILI G    GD+ +A E++ Q+++ G  P++  YTS I+ CCK GD++
Sbjct: 681 SQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 740

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA    +++  +G+     TYT LI G  +  L +   + +++M+  G+ P    Y+CL+
Sbjct: 741 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800

Query: 288 HEYCNEGKVSEGF 300
               +   V+E +
Sbjct: 801 TSLLSRASVAEEY 813


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 244/551 (44%), Gaps = 67/551 (12%)

Query: 42  HTPQSISIILRLLLSKMSSHSHAAAQTLILKI--ISGRITS------SSFTPRSLL---- 89
            TP + S++  LL +   S   A+A TL+     ++  + S        F P SL     
Sbjct: 31  QTPTAASLLADLLSAPTPS---ASALTLLRDAPSLAAELYSLLAAPYHGFDPASLALLFS 87

Query: 90  ---CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
              CH     P  S  +  + LY+  I +   S  +D A F    +      P ++ FN+
Sbjct: 88  LPSCHR---LPPPSPRILSALLYK--ILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNT 142

Query: 147 LLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE--E 203
           LL  + ++        LF S     V  +V ++GIL+KG C+AG +  A  VL+ +   E
Sbjct: 143 LLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPE 202

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
               P+VV+  +++DG CK G +++A                                  
Sbjct: 203 SDVCPDVVMLNNIVDGLCKTGRLQQAVKFVE----------------------------- 233

Query: 264 GFEFYEKMQ-LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
                E+M+ ++G +P+  TYNCL H +C  G V    +L  +M    V  N VT NT++
Sbjct: 234 -----ERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIV 288

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISP----NVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
            GLC   RV  A     + +   + P    N +TY+ L+  F        A  LF+++  
Sbjct: 289 GGLCWVGRVGAALEFFREKRT--VWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVD 346

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G SP  + Y  +I   ++AG    A  +   M++ G       Y ILI  F R   + +
Sbjct: 347 EGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNE 406

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A+E+   M+++G  PDVYTY  L+ GLC  G+     +L   M +    P+ V +  +I 
Sbjct: 407 AYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIH 466

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           GYCK G    ALR+   M+E G+ PN   Y++ I  LC+      A  L ++M +  +  
Sbjct: 467 GYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPA 526

Query: 559 SVSLYNILYRA 569
           +V+ +N L + 
Sbjct: 527 NVTTFNALLKG 537



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 212/473 (44%), Gaps = 18/473 (3%)

Query: 43  TPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHL---------T 93
           +P+ +S +L  +LS+  S S  AA+ L   + +G     +    +LL  L         T
Sbjct: 98  SPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMT 157

Query: 94  QLFPSSSNPVTKSRL--YESIIDAHLKSRLSDQALFYFHQM--LDSGVRPRSNTFNSLLI 149
           QLF S  +   +  +  Y  ++    K+     AL     M   +S V P     N+++ 
Sbjct: 158 QLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVD 217

Query: 150 FVIKSCSFDKGWLFFSENRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
            + K+    +   F  E    V     +  ++  L    C AG++  A E++ ++E+   
Sbjct: 218 GLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERV 277

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH--TYTVLICGLFKNGLQKDG 264
           +PN V   +++ G C  G +  A   FR+   +   A  +  TY+ L+            
Sbjct: 278 TPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVA 337

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
            E + +M   G SP    Y  +I      G++ + + +   M+      +   YN LI G
Sbjct: 338 MELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGG 397

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C+  R+ EA  LL +MK AG+ P+V TYN L+ G C AG+      L  ++   G  PS
Sbjct: 398 FCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPS 457

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVT+  LI  + K G    A  + R M+E GI P+ V Y  LID   +S D   A E++ 
Sbjct: 458 VVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFD 517

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
            M++     +V T+  L+ GL  K   ++A +L + M E +  P+ V  ++++
Sbjct: 518 EMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILM 570



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 1/261 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y +++ A L +     A+  FH+M+D G  P +  + +++  + ++   D  W +  S  
Sbjct: 321 YSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMK 380

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +   +LD  ++ ILI G C    LN+A+E+L +++E G  P+V  Y +L+ G CK GD  
Sbjct: 381 KAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFL 440

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L  K+ + G   +  T+  LI G  K G   +    +  M  +G+ P+   YN LI
Sbjct: 441 AVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLI 500

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C     S   +LFDEMR + V  NV T+N L+ GL  +   ++A  L+D M+    +
Sbjct: 501 DFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCT 560

Query: 348 PNVITYNKLIDGFCDAGETDK 368
           P+ +T + L++     GETD+
Sbjct: 561 PDYVTIDILMEWLPVIGETDR 581



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I  + K    D+AL  F  M +SG++P +  +N+L+ F+ KS         F E R
Sbjct: 461 FGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMR 520

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K V  +V +F  L+KG  +     KAFE+++ + E   +P+ V    L++     G+ +
Sbjct: 521 EKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETD 580

Query: 228 RAK 230
           R K
Sbjct: 581 RLK 583


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 240/546 (43%), Gaps = 89/546 (16%)

Query: 94  QLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK 153
           Q+   S  P   +  Y ++ID + ++  +D+A    ++M  +GVRPR  +    ++    
Sbjct: 359 QMLRQSLKPSVAT--YTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL---- 412

Query: 154 SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
            C    G          ++ DV ++  LI G C+ G +++  E+L+++++ G  PN V+Y
Sbjct: 413 KCMLADG----------IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 462

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T+L+   CK G  + A   F  I   GLVA    +  L+C  ++ G+  +  +F + M  
Sbjct: 463 TTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSR 522

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RH------------------------ 308
             +S  + ++NC+I  YC  G V E F ++D M RH                        
Sbjct: 523 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 582

Query: 309 --------REVACNV--VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
                    E AC +   T NTL+ G+CK   + EA  L ++M    I P+  TY  L+D
Sbjct: 583 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 642

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS------------- 405
           GFC  G+   A  L   +   G  P  + Y  L+      G  K AS             
Sbjct: 643 GFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 702

Query: 406 -----------------------DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
                                   L+R M E  + PS  +Y IL+  +++   + +   +
Sbjct: 703 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 762

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW--ETKLEPNDVVYNMMIFGY 500
           Y  M K G  PD  TY +LI GLC  G ++ A K    M   E+ L+P    Y  +I   
Sbjct: 763 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAK 822

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+ G+   A  L  +M   G+VP+  + SS +  LC+ GK  EA ++ + +++ G+ P++
Sbjct: 823 CRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 882

Query: 561 SLYNIL 566
           + +  L
Sbjct: 883 ATFTTL 888



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 226/469 (48%), Gaps = 16/469 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
           LY +++    K+  + +AL YF  +  SG+   S   N+LL      CSF  +G +  +E
Sbjct: 461 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALL------CSFYREGMIAEAE 514

Query: 167 ------NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
                 +R K+  DV SF  +I   C+ G++ +AF V + +   G+ P++  Y SL+ G 
Sbjct: 515 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 574

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C+ G + +AK     + E      + T   L+ G+ K+G   +  +  EKM    + P  
Sbjct: 575 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 634

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTY  L+  +C  GK+     L   M  + +  + + Y  L+ GL  E +V+ A  +  +
Sbjct: 635 YTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 694

Query: 341 MKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +    G+  + I YN +++G+   G+ ++  RL   +  N   PS  +YN+L+  + K G
Sbjct: 695 IICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG 754

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS--LMQKSGFSPDVYT 457
                  L R+M + GI P  VTY +LI        +E A +     ++++SG  P    
Sbjct: 755 QLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTH 814

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI+  C  G++  A +L   M    + P++V  + ++ G CK G    A+ +   + 
Sbjct: 815 YIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 874

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             G+VP IA++++ +  LC++ K  +A  L   M   GLK  V  YN+L
Sbjct: 875 RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVL 923



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 213/460 (46%), Gaps = 17/460 (3%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+ +SI+      R++       H ++ + +  ++ +    L     SCS     L  + 
Sbjct: 93  RMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTI 152

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +RC    +++S  +L+    + G +  A   +  ++E GF  ++    ++++        
Sbjct: 153 SRCD-PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E   +  ++  +        T  +++  L   G         +KM+ N   P+  TYN +
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTI 270

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           ++ Y  +G+     ++ D+M    +  ++ TYN +I  LCK  R   A  LL +M+   +
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+  +YN LI GF   G+ + A  +FNQ+      PSV TY  LI  + + G +  A  
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           ++ EM+  G+ P EV+               KA ++   M   G  PDV TY  LI+G+C
Sbjct: 391 VLYEMQITGVRPREVS---------------KAKQILKCMLADGIDPDVITYSALINGMC 435

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G + E  ++ + M ++ + PN+V+Y  ++F +CK G++  AL+   ++   GLV N  
Sbjct: 436 KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +++ +    ++G   EAE     M ++ +   V+ +N +
Sbjct: 496 IHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCI 535



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 159/360 (44%), Gaps = 39/360 (10%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N +  +  Y  ++D   K      AL     ML+ G+ P +  +  LL  ++      
Sbjct: 627 TRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 686

Query: 159 KGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
                F E  CK  L  D  ++  ++ G  + G +N+   ++  + E    P+   Y  L
Sbjct: 687 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 746

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL--N 274
           + G  K G + R   L+R + + G+     TY +LI GL + GL +   +F EKM L  +
Sbjct: 747 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEES 806

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH-----REVA----------C------ 313
           G+ P    Y  LI+  C  G +   F+L ++M+       EVA          C      
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866

Query: 314 --------------NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
                          + T+ TL+ GLCKE ++ +A  L   M+  G+  +V+TYN LI G
Sbjct: 867 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 926

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C+      A  L+ ++KS G  P++ TY  L  A    G  +    L++++E+RGI PS
Sbjct: 927 LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 231/454 (50%), Gaps = 2/454 (0%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           +P+ +   +  ++ ++ ++     A+     M  +G+ P  +  N+ +  ++     DK 
Sbjct: 227 DPIRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKA 286

Query: 161 WLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
             F    +  ++E +V ++  LIKG C+   L  A E++ ++   G SP+ + Y +++  
Sbjct: 287 VRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGF 346

Query: 220 CCKNGDIERAKMLFRK-IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
            CK   I+  ++L  K + +  L+  Q TY   +  L K+G   +  EF  + +      
Sbjct: 347 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
               Y+ ++H +C EG++ +  ++ +EM  +    +VVTY ++I GLC+E +V +A+++L
Sbjct: 407 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 466

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
            QM   G  PN ++Y  L++G C  G + +A  + N  + +   P+ +TY+VL+  F + 
Sbjct: 467 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRRE 526

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G S  A DLVREM ++G  P+ V   +LI S  + + +++A         +G + +V  +
Sbjct: 527 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 586

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
             +IHG C K +++ A  L + M+ +   P+ V Y  +I    K+G    A +L  +M  
Sbjct: 587 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 646

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            GL+P   +Y + I   C+ G+  +   LL +ML
Sbjct: 647 VGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML 680



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 218/448 (48%), Gaps = 6/448 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVY 176
           + R+ +  L     + DS + P   T+N+ +  + K    D+   F  E    +  +D  
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            +  ++   C  G ++KA E++N++   G  P+VV YTS+I+G C+   +++AK + R++
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G      +YT L+ GL KNG   +  E     + +   P+  TY+ L+H +  EGK 
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           SE   L  EM  +      V  N LI  LC+E +V EA+R ++Q    G + NV+ +  +
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC   + + A  L + +  + + P VVTY  +I A  K G  + A+ L  +M   G+
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT-YGVLIHGLCMKGNMKEAS 475
            P+ VTY  +I  + R   M +  ++  L++K     +  T Y  +I  LC  GN+++A 
Sbjct: 650 IPTPVTYRTVIHQYCR---MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAY 706

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           KL   +  T  + +    +M+I  Y  +G    +  +   M  + L+P++         L
Sbjct: 707 KLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKL 766

Query: 536 CQDGKWPEAEVLLNQMLKLG-LKPSVSL 562
             +GK  EA+ L+ + ++ G + P   L
Sbjct: 767 MLEGKSEEADKLILRFVERGRISPQCQL 794



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 3/315 (0%)

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           + G  ++       MQ  G+ P L   N  IH      ++ +  +  + M+  E+  NV+
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 303

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ- 375
           TYN LI G C   R+++A  L+ +M   G SP+ I+Y  ++   C      K  RL  + 
Sbjct: 304 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI-KEVRLLMEK 362

Query: 376 -LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
            LK +   P  VTYN  +   SK G+   A + +RE EER     +V Y+ ++ SF R  
Sbjct: 363 MLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 422

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
            M+KA E+ + M   G  PDV TY  +I+GLC +  + +A K+   M++   +PN V Y 
Sbjct: 423 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 482

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ G CK GNS  A  ++    E   +PN  +YS  +    ++GK  EA  L+ +M+K 
Sbjct: 483 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542

Query: 555 GLKPSVSLYNILYRA 569
           G  P+    N+L ++
Sbjct: 543 GFFPTPVEINLLIQS 557



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 192/448 (42%), Gaps = 75/448 (16%)

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
           D+ W +  +   + E    +FG ++     AG L  A  VL  +++ G  P++ I  + I
Sbjct: 219 DRQWRYRHDPIRRPE----AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAI 274

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
                                           VL+ G   N L K    F E+MQ+  + 
Sbjct: 275 H-------------------------------VLVMG---NRLDK-AVRFLERMQIVEIE 299

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P++ TYNCLI  YC+  ++ +  +L  EM  +  + + ++Y T++  LCKE R++E   L
Sbjct: 300 PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL 359

Query: 338 LDQM-KMAGISPNVITYN-----------------------------------KLIDGFC 361
           +++M K + + P+ +TYN                                    ++  FC
Sbjct: 360 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 419

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G  DKA  + N++ S G  P VVTY  +I    +      A  ++R+M + G  P+ V
Sbjct: 420 REGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTV 479

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           +YT L++   ++ +  +A EM ++ ++  + P+  TY VL+HG   +G   EA  L   M
Sbjct: 480 SYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREM 539

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
            +    P  V  N++I   C+E     A R + +    G   N+ ++++ I   CQ    
Sbjct: 540 IKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDL 599

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             A  LL+ M      P V  Y  +  A
Sbjct: 600 EAALSLLDDMYLSNKHPDVVTYTTIIDA 627


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 202/392 (51%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           + ++  ++  CC+ G    A ++++++E  G   +V  Y  LID  CKN    +  +L +
Sbjct: 10  IVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLK 69

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           K+ +  +   + TY  LI GL K          + +M +  +SP+  TYN LI  +C+ G
Sbjct: 70  KMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCG 129

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
              +  +L D M  + +  + V Y  L+ GL K  +   A+ L+++++M+G+      Y 
Sbjct: 130 NFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYT 189

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            +IDG C  G  D++ +L + +  +G SP ++T++VLI  F KAG  K A +++ +M + 
Sbjct: 190 AMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKA 249

Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
           G+ P+ V Y  LI +  +  D+ +AF  Y+ M ++G   D +   VLI  LC  G + EA
Sbjct: 250 GLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEA 309

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
                 M    L PN + ++ +I GY   G++ +A  +  EM + G  P+  +Y S +  
Sbjct: 310 EDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKG 369

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LC+ G   EA+ LL ++  +      ++YN +
Sbjct: 370 LCKGGNLREAKKLLYKLHHIPAAVDTNIYNTI 401



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 219/461 (47%), Gaps = 2/461 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +I++   K      A     +M   G+     T+N L+  + K+    KG+L   + R
Sbjct: 13  YNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMR 72

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            + +  + +++  LI G  +   +  A  V N++  +  SPN V Y  LIDG C  G+ E
Sbjct: 73  KRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFE 132

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L   +   GL   +  Y  L+ GL K           E+++++G+      Y  +I
Sbjct: 133 QALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMI 192

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C  G + E  +L D M     + +++T++ LI G CK  +++ A+ ++ +M  AG++
Sbjct: 193 DGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLA 252

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN + Y  LI   C  G+  +AFR +  +   G        NVLI +  +AG    A D 
Sbjct: 253 PNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDF 312

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R M    + P+ +T+  +I+ +    D  KAF M+  M K G  P  +TYG L+ GLC 
Sbjct: 313 MRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCK 372

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            GN++EA KL   +       +  +YN ++   CK G    A+ L GEM +  ++P+  +
Sbjct: 373 GGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHT 432

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILY 567
           Y+  +  L + GK   A +   + L  G L P+  +Y  L+
Sbjct: 433 YAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLF 473



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 168/320 (52%)

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G V T  TY  ++    K G  K   +  ++M+  G+   + TYN LI + C   + ++G
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
           + L  +MR R +A N  TYNTLI GL KE ++  A R+ ++M M  +SPN +TYN LIDG
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            CD G  ++A RL + +++ G  P  V Y  L+   SK     +A  L+  +   G+   
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
              YT +ID   +   ++++ ++  +M K G SPD+ T+ VLI+G C  G +K A ++  
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            M++  L PN V+Y  +I+  CK+G+   A R    M   G   +    +  I  LC+ G
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 540 KWPEAEVLLNQMLKLGLKPS 559
           +  EAE  +  M  + L P+
Sbjct: 305 RVAEAEDFMRHMSTIDLAPN 324



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 252/607 (41%), Gaps = 92/607 (15%)

Query: 53  LLLSKMSSHSHAAAQTLILKIISGR-ITSSSFTPRSLLCHL---------TQLFPS---- 98
           +L+  +  ++ +A   L+LK +  R I  + FT  +L+  L         T++F      
Sbjct: 50  MLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLML 109

Query: 99  --SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
             S N VT    Y  +ID H      +QAL     M   G+RP    + +LL  + K   
Sbjct: 110 NLSPNRVT----YNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAK 165

Query: 157 FD------------------KGWLFFSENRCKVEL------------------DVYSFGI 180
           FD                  + +    +  CK  L                  D+ +F +
Sbjct: 166 FDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSV 225

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C+AG +  A EV+ ++ + G +PN VIY +LI   CK GDI  A   +  +   G
Sbjct: 226 LINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTG 285

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                    VLI  L + G   +  +F   M    ++P+  T++C+I+ Y   G   + F
Sbjct: 286 HDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAF 345

Query: 301 KLFDEM-----------------------------------RHREVACNVVTYNTLICGL 325
            +FDEM                                    H   A +   YNT++   
Sbjct: 346 SMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSET 405

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPS 384
           CK  ++ +A  L  +M    + P+  TY  ++ G    G+   A   F +  + G  SP+
Sbjct: 406 CKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPN 465

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            V Y  L     K G S  AS +  EME +GI P  +    ++D + R   MEK  +++ 
Sbjct: 466 KVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFI 525

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            MQ    +P + TY +L+HG   K ++ + SK +N M    + P+ +  + +I G CK G
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                 ++L +M  +  + +  + +  I   C+  K  +A  LLN    LG+ P V+ YN
Sbjct: 586 MLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYN 645

Query: 565 ILYRAKN 571
            ++   N
Sbjct: 646 AIFTGLN 652



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 211/446 (47%), Gaps = 4/446 (0%)

Query: 106 SRLYESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           + +Y +I+    K  +LSD A+  F +M+   V P S+T+  +L  + +        LFF
Sbjct: 395 TNIYNTILSETCKRGKLSD-AVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453

Query: 165 SEN--RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +   R  +  +   +  L  G  + G  N A  +  ++E  G +P+ +   +++DG  +
Sbjct: 454 EKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSR 513

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E+ + LF K+    L  +  TY +L+ G  K        +FY  M   G+SP   T
Sbjct: 514 MGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLT 573

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
            + +I   C  G +  GFK+  +M   +   + +T N LI   C+  ++ +A  LL+   
Sbjct: 574 CHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKN 633

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           + GI P+V TYN +  G   A    ++  L + +   G +P+   Y  LI    + G+ +
Sbjct: 634 LLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQ 693

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L  EME  G++  +V  + ++    +   +E+A  +   M +    P V T+  L+
Sbjct: 694 GAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLM 753

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           H LC K  + EA KL   M    ++ + V YN++I G C +G++  A  L  EM E+GL 
Sbjct: 754 HMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLW 813

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLL 548
           PN  +Y + I  +  +    E  +L+
Sbjct: 814 PNTTTYCTLIDAISTNEGEVEERLLV 839



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 201/431 (46%), Gaps = 2/431 (0%)

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           +N +N++L    K          F E  +  V  D +++ I++ G    G +  A     
Sbjct: 395 TNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFE 454

Query: 200 QLEEMG-FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           +    G  SPN V+YTSL DG  K G    A  ++ ++   G+         ++ G  + 
Sbjct: 455 KALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRM 514

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  +   + + KMQ   ++PSL TYN L+H Y  +  + +  K ++ M    ++ + +T 
Sbjct: 515 GKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTC 574

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           +++I GLCK   +    ++L +M M     + +T N LI   C+  +  KAF L N    
Sbjct: 575 HSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNL 634

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
            G  P V TYN +    ++A   + +  L+ +M ERGITP+   Y  LI+   R  D++ 
Sbjct: 635 LGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQG 694

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           AF +   M+  G S        ++ GL   G ++EA  + + M + +L P    +  ++ 
Sbjct: 695 AFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMH 754

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
             CK+     AL+L G+M   G+  ++ +Y+  I  LC DG    A  L  +M + GL P
Sbjct: 755 MLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWP 814

Query: 559 SVSLYNILYRA 569
           + + Y  L  A
Sbjct: 815 NTTTYCTLIDA 825


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 185/374 (49%), Gaps = 9/374 (2%)

Query: 179 GILIKGCCEAGDLN---------KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           G+ +  CC    L+         +  EVL ++E  G  P V  YT L+DG    GDI + 
Sbjct: 163 GVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKV 222

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           + +F +I    +    + Y+ +I    + G  +   E +++   NG+ P+  TY  LI+ 
Sbjct: 223 ESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALING 282

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           +C  G++     L  +M+ R V  N + +NT+I G C+   V +A  +   M+  GI  +
Sbjct: 283 FCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLD 342

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
           V TYN L  G C     + A +L + +  NG   + V+Y  LI   SK G+   A  L R
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFR 402

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           +ME +G  PS VTY ++ID +++S  + +A      M+K G  PDVYTY  L+HG C+ G
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A +LF  M +   +PN V Y  +I G  KEG S  A +    M   GL P+   YS
Sbjct: 463 KVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYS 522

Query: 530 STIGVLCQDGKWPE 543
             +G L  D +  E
Sbjct: 523 MLVGSLHTDKRKDE 536



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 5/402 (1%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           P    P++ S     ++D   K+   D A     +M   GV+  +  +N LL    +  +
Sbjct: 128 PGCITPLSAS----VVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKN 183

Query: 157 FDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
             +      E     VE  V ++ IL+ G   AGD++K   V ++++    + +V  Y++
Sbjct: 184 DARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSA 243

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           +I+  C+ G++ RA  +F +    G+   + TY  LI G  K G  +        MQL G
Sbjct: 244 VINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG 303

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
           V  +   +N +I  YC  G V +  ++   M    +  +V TYNTL CGLC+  R+++A+
Sbjct: 304 VGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAK 363

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           +LL  M   G+  N ++Y  LI      G+  +A RLF  ++  G  PSVVTYNV+I  +
Sbjct: 364 KLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 423

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K+G+ + A    +EME++G+ P   TY  L+     +  ++ A  ++  M++ G  P+V
Sbjct: 424 IKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNV 483

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
             Y  LI GL  +G  +EA + +++M    L P+D +Y+M++
Sbjct: 484 VAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 169/358 (47%), Gaps = 1/358 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  ++D + + +   +      +M   GV P   T+  L+  +  +    K    F E  
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  DVY +  +I   C AG++ +A EV ++    G  PN   Y +LI+G CK G IE
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIE 290

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ML   +   G+   Q  +  +I G  ++G+     E    M+  G+   +YTYN L 
Sbjct: 291 AAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLA 350

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C   ++ +  KL   M    V  N V+Y TLI    KE  + EA RL   M+  G  
Sbjct: 351 CGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSR 410

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+V+TYN +IDG+  +G   +A R   +++  G  P V TY  L+      G   +A  L
Sbjct: 411 PSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRL 470

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             EM++RG  P+ V YT LI    +    E+AF+ Y  M  +G +PD   Y +L+  L
Sbjct: 471 FEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 172/341 (50%), Gaps = 6/341 (1%)

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A++L + +       T  + +V++ G  K G   D     ++M  +GV  +   YN L+ 
Sbjct: 117 AELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLD 176

Query: 289 EYC---NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            Y    N+ +V+E  K   EM    V   V TY  L+ GL     + + E + D++K   
Sbjct: 177 TYTRQKNDARVAEVLK---EMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKN 233

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++ +V  Y+ +I+ +C AG   +A  +F++   NG  P+  TY  LI  F K G  + A 
Sbjct: 234 VAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAE 293

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ +M+ RG+  +++ +  +ID + R   ++KA E+ ++M++ G   DVYTY  L  GL
Sbjct: 294 MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGL 353

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C    M++A KL + M E  +E N V Y  +I  + KEG+   A RL  +M  KG  P++
Sbjct: 354 CRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSV 413

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  I    + G   EAE    +M K GL P V  Y  L
Sbjct: 414 VTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAAL 454



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 5/229 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL---LIFVIKSCSFDKGWLFF 164
           ++ ++ID + +  + D+AL     M   G++    T+N+L   L  V +     K     
Sbjct: 310 IFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIM 369

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           +EN   VE +  S+  LI    + GD+ +A  +   +E  G  P+VV Y  +IDG  K+G
Sbjct: 370 TEN--GVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I  A+   +++ + GLV   +TY  L+ G   NG        +E+M+  G  P++  Y 
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
            LI     EG+  E F+ +D M    +  +   Y+ L+  L  + R  E
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 52/110 (47%)

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           V++ G C  G M +A +L + M    ++ N   YN ++  Y ++ N  R   +L EM   
Sbjct: 138 VVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESG 197

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G+ P + +Y+  +  L   G   + E + +++ +  +   V  Y+ +  A
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247


>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           [Oryza sativa Japonica Group]
          Length = 580

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 191/375 (50%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  V + +      P+    ++L+    K+     A+ +F ++   G+    H Y  +
Sbjct: 127 HDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAM 186

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K G          +M   GV    +++N +I  YC +G   E   + + M ++ V
Sbjct: 187 LHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGV 246

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +VVT+N+LI GLCKE RV+EA +LL +M MAG++P+ +TY  L+DG+C AG+ ++A +
Sbjct: 247 KADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVK 306

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++++ G  P V TYN ++R   + G  K  + L+ EM+ER +    VT   LI+++ 
Sbjct: 307 LRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYC 366

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  DM  A ++   M +SG   D +TY  L+HG C    + EA +    M      PN  
Sbjct: 367 KRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYS 426

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           V + ++ G C + N+   L +  E+ ++G  P+ A Y S I  LC+ G    A  + N+M
Sbjct: 427 VLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEM 486

Query: 552 LKLGLKPSVSLYNIL 566
              GL+    +Y  L
Sbjct: 487 QGKGLEADCLVYATL 501



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 188/393 (47%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++   L+    ++     A +V +Q+   G + N  +Y +++  C K GD   A+ L 
Sbjct: 144 DAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLM 203

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+   + ++  +I    + G+Q +     E+M+  GV   + T+N LIH  C E
Sbjct: 204 TRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKE 263

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +V E  +L  EM    VA + VTY TL+ G C+   ++EA +L  +M+  G+ P V TY
Sbjct: 264 RRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 323

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C+ G+  +   L N++         VT N LI A+ K G+   A  + R M E
Sbjct: 324 NAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMME 383

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+   + TY  L+  F ++ ++++A E    M  +GFSP+      ++ GLC K N   
Sbjct: 384 SGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVA 443

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
              + + + +    P+  VY  +I   CK+G    A  +  EM  KGL  +   Y++   
Sbjct: 444 VLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLAC 503

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                GK   A  +LN+M K  L  +  +YN +
Sbjct: 504 AYLTAGKPVAALDILNEMAKKQLYITPQIYNCM 536



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 206/461 (44%), Gaps = 18/461 (3%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVY 176
           +S     AL  F  M    V P ++  ++LL  + KS         F +  R  V ++ +
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 181

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            +  ++  C +AGD   A  ++ +++  G   +   + ++I   C+ G    A  +  ++
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
              G+ A   T+  LI GL K    K+  +   +M + GV+P   TY  L+  YC  G +
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 301

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            E  KL  EM    +   V TYN ++  LC++ +++E   LL++M    +  + +T N L
Sbjct: 302 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTL 361

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I+ +C  G+   A ++  ++  +G      TY  L+  F KA     A + + EM   G 
Sbjct: 362 INAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGF 421

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
           +P+    + ++D     ++      +   + K GF PD   Y  LI  LC KG +  A  
Sbjct: 422 SPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGN 481

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL--VPNI-----ASYS 529
           +FN M    LE + +VY  +   Y   G    AL +L EM +K L   P I      SY+
Sbjct: 482 VFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNCMCTSYA 541

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
              G L          +L    ++ GL  + S+Y ++++A+
Sbjct: 542 DEKGSL---------NMLWVHAIERGLI-TKSVYKVMHQAR 572


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 209/395 (52%), Gaps = 1/395 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D A+  F++M+    RP        L  + K   +       ++ +   V  + Y+  IL
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    ++ A  VL+++ ++G  P+ V +T+LI+G C  G I+ A  LF ++     
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +    T+T+L+  L K G+  +    +E M   GV P++YTYN L++ YC   ++++  K
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASK 247

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +F+ M  +  A +V +Y+ LI G CK  R+ EA+ LL QM    + PN +TYN L+ G C
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
            A    +A  LF ++ S+G  P++ TY++L+    K G+ + A  L+  M+ER + P  V
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            Y ILI     +  +E A E++S +  +G  P V TY ++I GL  +G   EA KLF  M
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
            +    P+   YN++I G+ +  +   A++L+ EM
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 172/327 (52%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ D  +F  LI G C  G + +A E+ N++      PN V +T L+D  CK G +  A+
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F  + E G+    +TY  L+ G        D  + +E M   G +PS+++Y+ LI+ Y
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C   ++ E   L  +M  +E+  N VTYNTL+ GLC    + EA+ L  +M  +G+ PN+
Sbjct: 272 CKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNL 331

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            TY+ L+DG C  G  ++A +L   ++     P +V YN+LI+    AG  ++A +L  +
Sbjct: 332 RTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSK 391

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +   GI PS  TY I+I   ++    ++A++++  M+  GF PD  +Y V+I G     +
Sbjct: 392 LFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQD 451

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMI 497
              A +L + M   +   +   + M++
Sbjct: 452 PSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 190/368 (51%)

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           NQ++  G + N      LI+  C+   I  A  +  K+ +LG+     T+T LI GL   
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNE 169

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  K+  E + +M      P+  T+  L+   C +G VSE   +F+ M  + V  N+ TY
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTY 229

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N L+ G C  + + +A ++ + M   G +P+V +Y+ LI+G+C +   D+A  L  Q+  
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
               P+ VTYN L++    A +   A +L ++M   G+ P+  TY+IL+D   +   +E+
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A ++ + MQ+    PD+  Y +LI G+ + G ++ A +LF+ ++   + P+   YN+MI 
Sbjct: 350 ALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIK 409

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G  KEG S  A +L  +M + G +P+  SY+  I    Q+     A  L+++M+      
Sbjct: 410 GLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSA 469

Query: 559 SVSLYNIL 566
             S + +L
Sbjct: 470 DSSTFKML 477



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G+      FY  + +N   PS       +     + + S    L ++M    VA N  T 
Sbjct: 66  GIDDAMASFYRMIHMNP-RPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTL 124

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS 378
           N LI  LC+   +  A  +L +M   GI P+ +T+  LI+G C+ G   +A  LFN++  
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184

Query: 379 NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEK 438
               P+ VT+ +L+    K G    A  +   M E+G+ P+  TY  L++ +    +M  
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244

Query: 439 AFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           A +++ +M   G +P V++Y +LI+G C    + EA  L   M E +L PN V YN ++ 
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQ 304

Query: 499 GYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
           G C   +   A  L  +M   G++PN+ +YS  +  LC+ G   EA  LL  M +  L+P
Sbjct: 305 GLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEP 364

Query: 559 SVSLYNILYRA 569
            + LYNIL + 
Sbjct: 365 DIVLYNILIQG 375



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 164/313 (52%), Gaps = 15/313 (4%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC--------KVELDV 175
           +A+  F++M      P + TF  L+  + K     KG +  SE RC         VE ++
Sbjct: 174 EAVELFNEMAGRDAMPNTVTFTILVDVLCK-----KGMV--SEARCVFETMTEKGVEPNI 226

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           Y++  L+ G C   ++N A +V   +   G +P+V  Y+ LI+G CK+  I+ AK L  +
Sbjct: 227 YTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQ 286

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           + E  L+    TY  L+ GL       +  E ++KM  +G+ P+L TY+ L+   C  G 
Sbjct: 287 MSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGH 346

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E  KL   M+ R++  ++V YN LI G+    +++ A+ L  ++   GI P+V TYN 
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +I G    G +D+A++LF +++ +G  P   +YNV+I+ F +  +   A  L+ EM  R 
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466

Query: 416 ITPSEVTYTILID 428
            +    T+ +L+D
Sbjct: 467 FSADSSTFKMLLD 479



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 134/275 (48%)

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           N+  + +    F  M H     + V     +  + K+ +      L +QM + G++ N  
Sbjct: 63  NDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDY 122

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           T N LI+  C       A  + +++   G  P  VT+  LI      G  K A +L  EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             R   P+ VT+TIL+D   +   + +A  ++  M + G  P++YTY  L++G C++  M
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
            +ASK+F  M      P+   Y+++I GYCK      A  LL +M+EK L+PN  +Y++ 
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  LC      EA+ L  +M   G+ P++  Y+IL
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSIL 337


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 231/463 (49%), Gaps = 6/463 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-GWLFFSE 166
           L+  +I+A+ ++ L++QAL  F+++ + G +P    +N +L  ++    F     ++ + 
Sbjct: 110 LFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNM 169

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +EL+VY++ +L+K  C+   ++ A ++L ++   G  P+ V YT+++   C+ G +
Sbjct: 170 KRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKV 229

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E A+ L  +I     V     Y  LI G  +    ++ FE + +M + G+ P + TY+ +
Sbjct: 230 EEARELSMRIKSFVPV-----YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTV 284

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+     G V     +  +M  R  + NV T+ +L+ G     R+ EA  L ++M   G 
Sbjct: 285 INTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGS 344

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN + YN LI G C  G+  +A  +  +++ NG  P+  TY+ LI  F+KAG+   AS+
Sbjct: 345 EPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASE 404

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  +M   G  P+ V YT ++D   R+     A  +   M      P+  T+   I GLC
Sbjct: 405 IWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLC 464

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G  + A K+ N M +    PN   YN ++ G      +  AL+++GE+ E  +  N+ 
Sbjct: 465 CSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLV 524

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +Y++ +   C  G +  A  +  ++L  G KP    YN +  A
Sbjct: 525 TYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYA 567



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 225/495 (45%), Gaps = 32/495 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y  ++DA L           ++ M   G+     T+N LL  + K+   D      +E
Sbjct: 144 KIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAE 203

Query: 167 ------------------NRCKV-------ELD------VYSFGILIKGCCEAGDLNKAF 195
                             + C++       EL       V  +  LI G C    + + F
Sbjct: 204 MSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVF 263

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           E+ N++   G  P+V+ Y+++I+   + G++E A  +  K+   G     HT+T L+ G 
Sbjct: 264 ELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGY 323

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F  G   +  + + +M   G  P+   YN LIH  C+ GK+ E   +  +M    V  N 
Sbjct: 324 FMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNE 383

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+TLI G  K   +  A  + ++M   G  PNV+ Y  ++D  C     + A  L   
Sbjct: 384 TTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIEN 443

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + +    P+ +T+N  I+    +G ++ A  ++ +M + G  P+  TY  ++D    +  
Sbjct: 444 MANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKR 503

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
             +A ++   +++     ++ TY  ++ G C  G  K A ++   +     +P+ + YN 
Sbjct: 504 TREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNT 563

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGL-VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           +I+ YCK+G    A++L+  + +KG   P++ +Y+S +  +C      EA V L++M+  
Sbjct: 564 VIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINE 623

Query: 555 GLKPSVSLYNILYRA 569
           G+ P+ + +N L R 
Sbjct: 624 GICPNRATWNALVRG 638



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 197/397 (49%), Gaps = 13/397 (3%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +IK      D++    +L  ++  G S N  ++  +I+   + G  E+A   F +I
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFE----FYEKMQLNGVSPSLYTYNCLIHEYCN 292
           GE G   +   Y  ++  L    L ++ F+     Y  M+ +G+  ++YTYN L+   C 
Sbjct: 135 GEFGCKPSVKIYNHVLDAL----LSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCK 190

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
             +V    KL  EM ++    + V+Y T++  +C+  +V+EA  L   M++    P    
Sbjct: 191 NDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---V 245

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           YN LI+GFC   + ++ F LFN++   G  P V+TY+ +I   S+ GN +MA  ++ +M 
Sbjct: 246 YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMF 305

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            RG +P+  T+T L+  +     + +A ++++ M + G  P+   Y  LIHGLC  G M 
Sbjct: 306 LRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMV 365

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA  +   M    + PN+  Y+ +I G+ K G+   A  +  +M   G +PN+  Y+  +
Sbjct: 366 EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            VLC++  +  A  L+  M      P+   +N   + 
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKG 462



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 5/254 (1%)

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           +TY T+I  L  E  +   + LL  MK+ GIS N   +  +I+ +  AG  ++A + F +
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G  PSV  YN ++ A       +M + +   M+  GI  +  TY +L+ +  ++D 
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           ++ A ++ + M   G  PD  +Y  ++  +C  G ++EA +L  SM      P   VYN 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNA 248

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I G+C+E        L  EM  +G+ P++ +YS+ I  L + G    A  +L +M   G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 556 LKPSVSLYNILYRA 569
             P+V  +  L + 
Sbjct: 309 CSPNVHTFTSLMKG 322



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 6/199 (3%)

Query: 369 AFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           A   F  +  SN    + +TY  +I+      +      L++ M+  GI+ +E  + I+I
Sbjct: 56  ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVI 115

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           +++ R+   E+A + +  + + G  P V  Y  ++  L  +   +  + ++N+M    +E
Sbjct: 116 NAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIE 175

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N   YNM++   CK      A +LL EM+ KG +P+  SY++ +  +C+ GK  EA   
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA--- 232

Query: 548 LNQMLKLGLKPSVSLYNIL 566
             + L + +K  V +YN L
Sbjct: 233 --RELSMRIKSFVPVYNAL 249



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 6/222 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  ++D   ++ + + AL     M +    P + TFN+ +  +   CS    W     N
Sbjct: 420 VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL--CCSGKTEWAMKVLN 477

Query: 168 RCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           + +      +V ++  ++ G   A    +A +++ ++EEM    N+V Y +++ G C  G
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTY 283
             + A  +  K+   G      TY  +I    K G  K   +  +++   G   P ++TY
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 597

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             L+   CN   V E     D+M +  +  N  T+N L+ GL
Sbjct: 598 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 194/393 (49%), Gaps = 3/393 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  S  +L     EAG  N A   L   +   F+P      + I   CK G +E A  +F
Sbjct: 159 DSSSCNVLFDALVEAGACNAAKSFL---DSTNFNPKPASLEAYIRCLCKGGLVEEAISVF 215

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++  +G+ A+  T+  ++ G  + G     +E Y +M  + V   ++T   L+  +C+E
Sbjct: 216 GQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDE 275

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++S+G  L   +    V      +N LI G CK+        LL  M     +P++ TY
Sbjct: 276 NRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTY 335

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
            ++++G C  G+  + FR+F  LK  G +P  V Y  +I    +      A  L  EM +
Sbjct: 336 QEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQ 395

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G  P+E TY  +I  + +  ++E+A++MY  M   G+     +Y V+I GLC  G +KE
Sbjct: 396 KGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKE 455

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  LF  M    +  N + YN ++ G+CKEG       LL E+ ++G+ P+ ASY+  I 
Sbjct: 456 AHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLID 515

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            LCQ+G    A++L + M   G++P+V  ++ +
Sbjct: 516 KLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFM 548



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 219/478 (45%), Gaps = 36/478 (7%)

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
           C+  + F  S+N   K    E+ I    K  L ++A+  F Q+   GV     T+NS+L 
Sbjct: 176 CNAAKSFLDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVL- 234

Query: 150 FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN 209
                                            +G   AG ++  +E+  ++ E     +
Sbjct: 235 ---------------------------------RGSVRAGRIDFVWELYGEMVESSVVAD 261

Query: 210 VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYE 269
           V     L+   C    I     L R++ E G+V     +  LI G  K+       +   
Sbjct: 262 VHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLH 321

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
            M     +P ++TY  +++  C  GK  EGF++F +++ R  A + V Y T+I GLC+  
Sbjct: 322 SMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMK 381

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            + +A +L  +M   G  PN  TYN +I G+   G  ++A++++ ++   G     V+YN
Sbjct: 382 WLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYN 441

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM-EKAFEMYSLMQK 448
           V+I+     G  K A DL  EM  +GI  + +TY  L+  F +   + E A  +Y L+ +
Sbjct: 442 VMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQ 501

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  P   +Y  LI  LC +G+M+ A  L++ M    +EP    ++ MI G+CK+G +  
Sbjct: 502 -GIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAME 560

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  L  M    L P   S+ S I  L Q  +  +A ++L+ MLK+G + S+S+ N L
Sbjct: 561 GMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSL 618



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 183/358 (51%), Gaps = 8/358 (2%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLFFSENRCKVEL 173
           ++R+SD       ++L+ GV PR+  FN L+    K  ++    D      + NR     
Sbjct: 275 ENRISDGHNL-LRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAP--- 330

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D++++  ++ G C+ G   + F V   L++ G++P+ V+YT++I G C+   +  A+ L+
Sbjct: 331 DIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLW 390

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G +  ++TY  +I G FK G  ++ ++ Y +M   G      +YN +I   C+ 
Sbjct: 391 FEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSH 450

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           GK+ E   LF+EM H+ +  N +TYN L+ G CKE ++ E   LL ++   GI P+  +Y
Sbjct: 451 GKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASY 510

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LID  C  G+   A  L++ +++ G  P+V T++ +I  F K G +    + +  M  
Sbjct: 511 APLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLR 570

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
             + P + ++  LI    + D ++ A  +   M K GF   +     L+  LC K ++
Sbjct: 571 SKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNSL 628


>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
 gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 693

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 251/539 (46%), Gaps = 47/539 (8%)

Query: 31  LFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
            F W+    G++H+ +SIS ++ +L+S   ++        ++K  SG         RSL 
Sbjct: 132 FFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGE-------ERSLC 184

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL- 148
             +  LF +  +      ++  +ID  ++ R  + AL   +++   G+ P      SLL 
Sbjct: 185 LVMKDLFKTRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244

Query: 149 -------------------------------IFVIKSCS---FDKGW-LFFSENRCKVEL 173
                                          +F+ K CS   FDKGW L        +  
Sbjct: 245 EILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +F + I   C+AG L +A  VL +L+  G S + V  +S+IDG CK G  E A  L 
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL- 363

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             I    L      Y+  +  +   G        ++++   G+ P    Y  +I  YCN 
Sbjct: 364 --IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  + F+ F  +       ++ T   LI    +   + +AE +   MK  G+  +V+TY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+ G+    + +K F L ++++S G SP V TYN+LI +    G    A++++ E+  
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  PS + +T +I  F +  D ++AF ++  M      PDV T   L+HG C    M++
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           A  LFN + +  L+P+ V+YN +I GYC  G+  +A  L+G M ++G++PN +++ + +
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +++ +   +   C  GD+ +A  +  ++ E+G  P+ V YT++IDG C  G  ++A   F
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G   +  T T+LI    + G   D    +  M+  G+   + TYN L+H Y   
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++++ F+L DEMR   ++ +V TYN LI  +     + EA  ++ ++   G  P+ + +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I GF   G+  +AF L+  +      P VVT + L+  + KA   + A  L  ++ +
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            G+ P  V Y  LI  +    D+EKA E+  LM + G  P+  T+  L+ GL
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 3/253 (1%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
            ++ LI    +E +V  A +L  ++   GI P+      L+         + A      +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
            S G+  +    ++ IR +   G      +L+  M+  GI P  V +T+ ID   ++  +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           ++A  +   ++  G S D  +   +I G C  G  +EA KL +S    +L PN  VY+  
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           +   C  G+  RA  +  E+ E GL+P+   Y++ I   C  G+  +A      +LK G 
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439

Query: 557 KPSVSLYNILYRA 569
            PS++   IL  A
Sbjct: 440 PPSLTTSTILIGA 452



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFSENRCKVELDVYSFG 179
           D+A     +++  G  P +  F  ++    K   F +    W + ++ R K   DV +  
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP--DVVTCS 587

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G C+A  + KA  + N+L + G  P+VV+Y +LI G C  GDIE+A  L   + + 
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647

Query: 240 GLVATQHTYTVLICGL 255
           G++  + T+  L+ GL
Sbjct: 648 GMLPNESTHHALVLGL 663


>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
 gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 251/539 (46%), Gaps = 47/539 (8%)

Query: 31  LFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL 89
            F W+    G++H+ +SIS ++ +L+S   ++        ++K  SG         RSL 
Sbjct: 132 FFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGE-------ERSLC 184

Query: 90  CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL- 148
             +  LF +  +      ++  +ID  ++ R  + AL   +++   G+ P      SLL 
Sbjct: 185 LVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244

Query: 149 -------------------------------IFVIKSCS---FDKGW-LFFSENRCKVEL 173
                                          +F+ K CS   FDKGW L        +  
Sbjct: 245 EILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +F + I   C+AG L +A  VL +L+  G S + V  +S+IDG CK G  E A  L 
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL- 363

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             I    L      Y+  +  +   G        ++++   G+ P    Y  +I  YCN 
Sbjct: 364 --IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G+  + F+ F  +       ++ T   LI    +   + +AE +   MK  G+  +V+TY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+ G+    + +K F L ++++S G SP V TYN+LI +    G    A++++ E+  
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG  PS + +T +I  F +  D ++AF ++  M      PDV T   L+HG C    M++
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           A  LFN + +  L+P+ V+YN +I GYC  G+  +A  L+G M ++G++PN +++ + +
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           +++ +   +   C  GD+ +A  +  ++ E+G  P+ V YT++IDG C  G  ++A   F
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             + + G   +  T T+LI    + G   D    +  M+  G+   + TYN L+H Y   
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++++ F+L DEMR   ++ +V TYN LI  +     + EA  ++ ++   G  P+ + +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             +I GF   G+  +AF L+  +      P VVT + L+  + KA   + A  L  ++ +
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            G+ P  V Y  LI  +    D+EKA E+  LM + G  P+  T+  L+ GL
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 5/268 (1%)

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LF+    R V   V  ++ LI    +E +V  A +L  ++   GI P+      L+    
Sbjct: 190 LFETRIDRRVLETV--FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEIL 247

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
                + A      + S G+  +    ++ IR +   G      +L+  M+  GI P  V
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
            +T+ ID   ++  +++A  +   ++  G S D  +   +I G C  G  +EA KL +S 
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
              +L PN  VY+  +   C  G+  RA  +  E+ E GL+P+   Y++ I   C  G+ 
Sbjct: 368 ---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +A      +LK G  PS++   IL  A
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGA 452



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFSENRCKVELDVYSFG 179
           D+A     +++  G  P +  F  ++    K   F +    W + ++ R K   DV +  
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP--DVVTCS 587

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
            L+ G C+A  + KA  + N+L + G  P+VV+Y +LI G C  GDIE+A  L   + + 
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647

Query: 240 GLVATQHTYTVLICGL 255
           G++  + T+  L+ GL
Sbjct: 648 GMLPNESTHHALVLGL 663


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 230/444 (51%), Gaps = 9/444 (2%)

Query: 132 MLDSGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           M  +G  P S TFN+L+  F  +    D   L  +     ++ +V S+  L++G C+   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 191 LNKAFEVLNQLEEMG--FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
            ++A E++  +   G   +P++V Y++L+ G CK G +E ++ L +++   GL      Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           T ++  L K+    +  E  E+M   G  P+L T+N LI   C E  +     L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             V  +VVTYNTL+ GLCK  R+QEAE+LL++MK +G +P+V+ Y+  + G C +G+   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER-GITPSEVTYTILI 427
           A ++  Q++ +   P+VVTYN ++    K+G    A +++ +M    G   + V Y+ ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D   +    ++A  +   M ++G  PDV TY  L++GLC  G ++EA +    M     +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV-----PNIASYSSTIGVLCQDGKWP 542
           PN V Y  ++ G C  G    A R++ EM+  G       P++++Y++ IG LC+ G+  
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
           +A     +M   G  P    Y+ +
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTI 444



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 41/377 (10%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT------------------- 214
           D+ ++  L+ G C+AG + ++ E+L ++   G  P+ ++YT                   
Sbjct: 81  DLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELL 140

Query: 215 ----------------SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                           +LI GCC+  ++E A  L + +   G+ A   TY  L+ GL K 
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKA 200

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  ++  +  E+M+ +G +P +  Y+  ++  C  GKV    ++ ++MR  +   NVVTY
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           NT++ GLCK  ++  A  +++QM  + G   NV+ Y+ ++DG C  G T +A  +   + 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G  P VVTY+ L+    KAG  + A + VREM   G  P+ VTY  L+        + 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 438 KAFEMYSLMQKSGFS-----PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +A  M   M   G       P V TY  LI GLC  G + +A K F  M     +P+ V 
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 493 YNMMIFGYCKEGNSYRA 509
           Y+ ++ G  + G + +A
Sbjct: 441 YSTIVEGLARSGRALQA 457



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 7/303 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + ++I    + +  + A      M  SGV+    T+N+L+  + K+    +        +
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV ++   + G C++G +  A +VL Q+ +    PNVV Y +++DG CK+G I+
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKID 274

Query: 228 RA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            A +M+ +     G       Y+ ++ GL K G  ++     E M   G  P + TY+ L
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG- 345
           ++  C  GK+ E  +   EM       N VTY +L+ GLC   R+ EAER++++M   G 
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394

Query: 346 ----ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
                 P+V TYN LI G C AG  D A + F +++S G  P  V+Y+ ++   +++G +
Sbjct: 395 GGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454

Query: 402 KMA 404
             A
Sbjct: 455 LQA 457


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 1/394 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DVYS+ ILI G C  G +++A EV  ++   G  PN+  Y+ LIDG CK G +++A  +F
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVF 373

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G++   ++Y++LI G  + G      +F+E+M  N  SPS + Y  LI  Y   
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKS 433

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            + +   K F  M+   +  + +  N ++   C++    +A  L ++ +  G+  N  +Y
Sbjct: 434 KQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSY 493

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N+ I   C     +KA +L   +      P VV Y+ LI  F+K  NS+ A  L  +M +
Sbjct: 494 NEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTK 553

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            GIT +  TYTILI+ F+    M+ A+ ++  M++S   PD   Y  L+ G C  G M  
Sbjct: 554 VGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTR 613

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  LF+ M      PN V Y   I  Y K   + +A +L  +M E+G+ P+   Y+  I 
Sbjct: 614 ARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIA 673

Query: 534 VLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNIL 566
             C  G+   AE L ++M + G   P+V +Y  L
Sbjct: 674 AFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 219/437 (50%), Gaps = 3/437 (0%)

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE--LDVYSFGILIKGCCEAGDLN 192
           SG  P   T+ + +  + K   F   W    +N C+    L+ + F  +I G C+ G L+
Sbjct: 239 SGETPNVVTYGTYIKGLCKVGLFGVAWRLI-QNLCRKNQPLNNHCFNAVIYGLCQGGILD 297

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A EV  +++  G  P+V  Y+ LIDG C+ G +++A  +F+++   G++   ++Y++LI
Sbjct: 298 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILI 357

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K G      E +E+M+ +G+ P +Y+Y+ LI  +C +G +    K ++EM     +
Sbjct: 358 DGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFS 417

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +   Y +LI G  K  +   A +    M+  G+ P+ I  N ++  +C   + +KA  L
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             + + NG   +  +YN  I    +    + A  L+  M +R + P  V Y+ LI  F +
Sbjct: 478 SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAK 537

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             + EKA  ++  M K G + +V TY +LI+       M  A +LF  M E+++ P+ + 
Sbjct: 538 RLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIA 597

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  ++ G+C  G   RA  L  EM+ +G  PN+ +Y+  I    +  K  +A  L  +M 
Sbjct: 598 YTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK 657

Query: 553 KLGLKPSVSLYNILYRA 569
           + G+ P   LY +L  A
Sbjct: 658 ERGVYPDQILYTMLIAA 674



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 233/464 (50%), Gaps = 5/464 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +++ +I     + + + A + F +  D G+     + N LL  +++    D   L F   
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197

Query: 167 NRCKVELDVYSFGILIKGCCE----AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            +     +++++ I++   C     + D+ +A E+L ++   G +PNVV Y + I G CK
Sbjct: 198 IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G    A  L + +         H +  +I GL + G+  +  E +++M+ +G+ P +Y+
Sbjct: 258 VGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           Y+ LI  +C +G+V +  ++F EMR+  +  N+ +Y+ LI G CKE RV +A  + ++MK
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            +GI P+V +Y+ LIDGFC  G+ D A + + ++ SN  SPS   Y  LI+ + K+    
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A    R M++ G+ P  +    ++  + R  D  KA  +    Q++G   + Y+Y   I
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           H +C     ++A +L   M +  + P+ V Y+ +I  + K  NS +A+ L  +M + G+ 
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            N+ +Y+  I +   D K   A  L   M +  + P    Y  L
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSL 601



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 210/454 (46%), Gaps = 22/454 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   +    DQA   F +M +SG+ P   +++ L+    K    DK    F E +
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  DVYS+ ILI G C  GD++ A +   ++    FSP+   Y SLI G  K+    
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 228 RAKMLFRKIGELGL----VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
            A   FR + +LG+    +A  H  ++  C   K    K      EK Q NGV  + Y+Y
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIY-CR--KPDFNK-ALALSEKFQENGVHFNPYSY 493

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N  IH  C      +  +L   M  R V  +VV Y+TLI    K +  ++A  L  +M  
Sbjct: 494 NEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTK 553

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            GI+ NV TY  LI+ F    + D A+RLF  +K +   P  + Y  L+  F   G    
Sbjct: 554 VGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTR 613

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L  EM   G +P+ VTYT  I+ +++ +   +A ++Y  M++ G  PD   Y +LI 
Sbjct: 614 ARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIA 673

Query: 464 GLCMKGNMKEASKLFNSM-WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
             C  G M  A  LF+ M  E +  PN V+Y  +I  Y K     +A +L  EM  KGL 
Sbjct: 674 AFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL- 732

Query: 523 PNIASYSSTIGVLC-QDGKWPEAEVLLNQMLKLG 555
                       LC  +G   E+    +Q+LK G
Sbjct: 733 ----------SRLCSSEGSVSESWCCRHQVLKTG 756



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 198/402 (49%), Gaps = 8/402 (1%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           VE     F +LIK       L  A  V  + ++ G   N++    L+    ++  ++  +
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVR 191

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQ-----KDGFEFYEKMQLNGVSPSLYTYNC 285
           +LF  + + G     HTYT+++   F  G+      +   E   K+ ++G +P++ TY  
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMM-NFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
            I   C  G     ++L   +  +    N   +N +I GLC+   + EA  +  +MK +G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I P+V +Y+ LIDGFC  G  D+A  +F +++++G  P++ +Y++LI  F K G    A 
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++  EM+  GI P   +Y+ILID F R  DM+ A + +  M  + FSP  + Y  LI G 
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
                   A K F  M +  + P+ +  N ++  YC++ +  +AL L  +  E G+  N 
Sbjct: 431 YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 490

Query: 526 ASYSSTIGVLCQDGKWPEAEV-LLNQMLKLGLKPSVSLYNIL 566
            SY+  I  +C+ G  PE  + LL  MLK  + P V  Y+ L
Sbjct: 491 YSYNEFIHRICR-GSVPEKALQLLPVMLKRNVLPDVVNYSTL 531



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 170/374 (45%), Gaps = 8/374 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +ID   +    D A+ ++ +M  +   P +  + SL+    KS  F        E R
Sbjct: 388 YSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANA---LKEFR 444

Query: 169 CKVELDVYSFGI----LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
              +L ++   I    ++   C   D NKA  +  + +E G   N   Y   I   C+  
Sbjct: 445 IMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGS 504

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             E+A  L   + +  ++     Y+ LI    K    +     + KM   G++ ++ TY 
Sbjct: 505 VPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYT 564

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ + ++ K+   ++LF  M+   V  + + Y +L+ G C    +  A  L D+M   
Sbjct: 565 ILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSRE 624

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G SPNV+TY   I+ +    + ++A +L+ ++K  G  P  + Y +LI AF   G    A
Sbjct: 625 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRA 684

Query: 405 SDLVREMEERG-ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
             L  EM++ G  TP+ V YT LI+S+++ +  ++A ++Y  M+  G S    + G +  
Sbjct: 685 EALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSE 744

Query: 464 GLCMKGNMKEASKL 477
             C +  + +  KL
Sbjct: 745 SWCCRHQVLKTGKL 758


>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
          Length = 689

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 191/375 (50%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           + A  V + +      P+    ++L+    K+     A+ +F ++   G+    H Y  +
Sbjct: 219 HDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAM 278

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           +    K G          +M   GV    +++N +I  YC +G   E   + + M ++ V
Sbjct: 279 LHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGV 338

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             +VVT+N+LI GLCKE RV+EA +LL +M MAG++P+ +TY  L+DG+C AG+ ++A +
Sbjct: 339 KADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVK 398

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L  ++++ G  P V TYN ++R   + G  K  + L+ EM+ER +    VT   LI+++ 
Sbjct: 399 LRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYC 458

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  DM  A ++   M +SG   D +TY  L+HG C    + EA +    M      PN  
Sbjct: 459 KRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYS 518

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           V + ++ G C + N+   L +  E+ ++G  P+ A Y S I  LC+ G    A  + N+M
Sbjct: 519 VLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEM 578

Query: 552 LKLGLKPSVSLYNIL 566
              GL+    +Y  L
Sbjct: 579 QGKGLEADCLVYATL 593



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 187/391 (47%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D ++   L+    ++     A +V +Q+   G + N  +Y +++  C K GD   A+ L 
Sbjct: 236 DAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLM 295

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   G+   + ++  +I    + G+Q +     E+M+  GV   + T+N LIH  C E
Sbjct: 296 TRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKE 355

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            +V E  +L  EM    VA + VTY TL+ G C+   ++EA +L  +M+  G+ P V TY
Sbjct: 356 RRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 415

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N ++   C+ G+  +   L N++         VT N LI A+ K G+   A  + R M E
Sbjct: 416 NAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMME 475

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G+   + TY  L+  F ++ ++++A E    M  +GFSP+      ++ GLC K N   
Sbjct: 476 SGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVA 535

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
              + + + +    P+  VY  +I   CK+G    A  +  EM  KGL  +   Y++   
Sbjct: 536 VLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLAC 595

Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
                GK   A  +LN+M K  L  +  +YN
Sbjct: 596 AYLTAGKPVAALDILNEMAKKQLYITPQIYN 626



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 3/410 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIK 183
           AL  F  M    V P ++  ++LL  + KS         F +  R  V ++ + +  ++ 
Sbjct: 221 ALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 280

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
            C +AGD   A  ++ +++  G   +   + ++I   C+ G    A  +  ++   G+ A
Sbjct: 281 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKA 340

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              T+  LI GL K    K+  +   +M + GV+P   TY  L+  YC  G + E  KL 
Sbjct: 341 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLR 400

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EM    +   V TYN ++  LC++ +++E   LL++M    +  + +T N LI+ +C  
Sbjct: 401 GEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKR 460

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G+   A ++  ++  +G      TY  L+  F KA     A + + EM   G +P+    
Sbjct: 461 GDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVL 520

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
           + ++D     ++      +   + K GF PD   Y  LI  LC KG +  A  +FN M  
Sbjct: 521 SWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQG 580

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL--VPNIASYSST 531
             LE + +VY  +   Y   G    AL +L EM +K L   P I +Y S+
Sbjct: 581 KGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNYKSS 630



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 95/200 (47%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A R+F+ +++    P     + L+ A +K+  +  A  +  +M   G+  +   Y  ++ 
Sbjct: 221 ALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 280

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             +++ D   A  + + M  +G   D +++  +I   C KG   EA  +   M    ++ 
Sbjct: 281 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKA 340

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V +N +I G CKE     A +LL EM   G+ P+  +Y++ +   C+ G   EA  L 
Sbjct: 341 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLR 400

Query: 549 NQMLKLGLKPSVSLYNILYR 568
            +M  +G+ P V+ YN + R
Sbjct: 401 GEMEAMGMLPGVATYNAILR 420


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 261/587 (44%), Gaps = 64/587 (10%)

Query: 35  ASRQGLQHTPQSISIILRLLLSKMSSHSH----AAAQTLILKIISGRITSSSFTPRSLL- 89
           ASR GL HT  ++S  L      ++ HSH    A+A T    +I  R   S  +  +LL 
Sbjct: 33  ASRIGLAHTDPALSDAL------VACHSHLGNIASALTCFDHLIESRYVPSPASSAALLR 86

Query: 90  -----------CHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
                        L  L+  + +P+  S+ +  +I         D+A F F  ML  G+ 
Sbjct: 87  AMCAASMYSEVVDLFVLWEGAPSPLPVSK-FPFLIHGLCSKGAVDKARFLFDVMLGLGLA 145

Query: 139 PRSNTFNSLLIFVIK---SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           P    + SL+    K   S   D+      +N   + LD      L+KG C+ G L  A 
Sbjct: 146 PPVRVYKSLVFTYCKARRSLEADEMCCLMVKN--GMYLDRMLGTALVKGLCQEGRLELAM 203

Query: 196 EVLNQLE-EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
           +V N++    G   +   YT++I G  ++G ++    L++++ + G+  T  TY V++  
Sbjct: 204 DVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWW 263

Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
             KN       E Y  M   GVSP L  Y  L+   C EGK+ E  +LF +M  R V  +
Sbjct: 264 YCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPD 323

Query: 315 VVTYNTL----------------------------------ICGLCKEMRVQ-EAERLLD 339
            V + ++                                  +   C  M +Q EAERLLD
Sbjct: 324 HVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLD 383

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M  + + P     N +I   C  G  D ++ L ++L + G  PSV+TYN++I+   +  
Sbjct: 384 EMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQK 443

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A  L+  M+ RG+ P   T +I++ ++ +  D+E A  ++  M K G  P +  Y 
Sbjct: 444 RMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYD 503

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            +I  LC  G+ KEA      M E  L P++V+Y  ++ GY    ++  A R+  EM E+
Sbjct: 504 SIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLER 563

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           GL P   +Y + I  L +D K  +A   L +ML+ G      +Y +L
Sbjct: 564 GLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTML 610



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 206/431 (47%), Gaps = 1/431 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y ++I    +    D     + +M D G+ P   T+N ++ +  K+        L+    
Sbjct: 222 YTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMV 281

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  V  D+  + +L+   C+ G L +A ++  ++ E G  P+ V++ S+     K  ++ 
Sbjct: 282 RGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVV 341

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
             +   + + +L         + L  G     LQ++     ++M  + + P     N +I
Sbjct: 342 FVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMI 401

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+EG++   + L D++       +V+TYN +I  LC++ R+ +A  L++ M+  G+ 
Sbjct: 402 IAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVR 461

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P++ T + ++  +C  G+ + A  LF+++  +G  PS+  Y+ +I    + G+ K A   
Sbjct: 462 PDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFT 521

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +R+M E G+ P EV YT L++ +      + A  ++  M + G  P  + YG LI+GL  
Sbjct: 522 LRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVK 581

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              +++A      M E       V+Y M+I  + ++G  +  L L+  M +  + P++ +
Sbjct: 582 DNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLIT 641

Query: 528 YSSTIGVLCQD 538
           Y + +  +C++
Sbjct: 642 YGALVTGICRN 652



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 206/479 (43%), Gaps = 46/479 (9%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D + +   +++  G  P   T+N ++ ++ +    D      +  + + V  D+ +  I+
Sbjct: 411 DVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIM 470

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   C+ GD+  A  + +++ + G  P++ +Y S+I   C+ G  + A+   R++ E GL
Sbjct: 471 VTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGL 530

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V  +  YT L+ G       K     +++M   G+ P  + Y  LI+    + K+ +   
Sbjct: 531 VPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALH 590

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
             + M     A   V Y  LI    ++        L+D M    + P++ITY  L+ G C
Sbjct: 591 YLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGIC 650

Query: 362 D-----------AGETDKA----FRLFNQ------------------------------L 376
                       A + D+A    FRL  Q                              L
Sbjct: 651 RNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDL 710

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
             +G  P +  YN ++    +A     A +L+  ME+ G+ P+ VTYTIL+++ +R  D 
Sbjct: 711 VESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDS 770

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +A ++++ +   G   D   Y   I GL +    KEA   F  M +    P+   Y+ +
Sbjct: 771 NRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKI 830

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +     E ++  AL +  +M   G +P  ++YSS + VL +D +W E + +   ML+ G
Sbjct: 831 MEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKG 889



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 204/523 (39%), Gaps = 93/523 (17%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKV--ELD----VYSFGIL 181
           F +ML+ GV P    F S+  F      F KGW + F     K   +LD    +     L
Sbjct: 312 FTKMLERGVFPDHVLFISIARF------FPKGWEVVFVRKALKAVAKLDCSGELLELSSL 365

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
             GC       +A  +L+++      P   I   +I   C  G ++ +  L  K+   G 
Sbjct: 366 ASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGY 425

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +  TY ++I  L +     D       MQ  GV P + T + ++  YC  G +     
Sbjct: 426 EPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALS 485

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           LFDEM    +  ++  Y+++I  LC+    +EAE  L QM  AG+ P+ + Y  L++G+ 
Sbjct: 486 LFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYS 545

Query: 362 DAGETDKAFRLFNQLKSNGQSP-----------------------------------SVV 386
               T  A R+F+++   G  P                                     V
Sbjct: 546 TMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTV 605

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM---------- 436
            Y +LI  F + G   +  DLV  M +  + P  +TY  L+    R+ D           
Sbjct: 606 IYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAK 665

Query: 437 --EKAFEMYSLMQK---------------------------------SGFSPDVYTYGVL 461
             E  + ++ L+ +                                 SG  PD++ Y  +
Sbjct: 666 LDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGM 725

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           ++GLC    M +A  L + M ++ + PN V Y +++    + G+S RA++L   +N  G 
Sbjct: 726 LNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGH 785

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           V +   Y++ I  L    +  EA      M K G  PS + Y+
Sbjct: 786 VFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYD 828



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 169/394 (42%), Gaps = 1/394 (0%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           S   L++  C A   ++  ++    E       V  +  LI G C  G +++A+ LF  +
Sbjct: 80  SSAALLRAMCAASMYSEVVDLFVLWEGAPSPLPVSKFPFLIHGLCSKGAVDKARFLFDVM 139

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
             LGL      Y  L+    K     +  E    M  NG+         L+   C EG++
Sbjct: 140 LGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRL 199

Query: 297 SEGFKLFDEMRHREVA-CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
                +F+ MR  E A  +   Y T+I GL +   V     L  +MK  G+ P  +TYN 
Sbjct: 200 ELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNV 259

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           ++  +C       A  L+N +   G SP +  Y +L+ +  K G    A  L  +M ERG
Sbjct: 260 MMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERG 319

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P  V +  +   F +  ++    +    + K   S ++     L  G       +EA 
Sbjct: 320 VFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAE 379

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +L + M  + L P D + NMMI   C EG    +  LL ++   G  P++ +Y+  I  L
Sbjct: 380 RLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYL 439

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           C+  +  +A  L+N M   G++P +S  +I+  A
Sbjct: 440 CRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTA 473



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/415 (19%), Positives = 168/415 (40%), Gaps = 59/415 (14%)

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           G    + FT R ++          +  V    +Y ++++ +   R +  A   F +ML+ 
Sbjct: 513 GHFKEAEFTLRQMI---------EAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLER 563

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLN 192
           G++P S+ + +L+  ++K     K   +     E     +  +Y+  +LI      G+  
Sbjct: 564 GLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYT--MLINQFFRKGEEW 621

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD-----------IERAK-MLFRKIGEL- 239
              ++++ + +    P+++ Y +L+ G C+N D           ++ A+ MLFR + ++ 
Sbjct: 622 LGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQIS 681

Query: 240 --------------------------------GLVATQHTYTVLICGLFKNGLQKDGFEF 267
                                           G++   H Y  ++ GL +     D +  
Sbjct: 682 FGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNL 741

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
              M+ +GV P+  TY  L++     G  +   +LF+ +       + V YNT I GL  
Sbjct: 742 LSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSL 801

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
             R +EA      M+  G  P+   Y+K+++       TD A  +F+ +  +G  P    
Sbjct: 802 ARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSN 861

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           Y+ L+   +K    +    +   M E+G +    T  +L +   +  +++ AFE+
Sbjct: 862 YSSLLLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLLEELCYKQGELDLAFEL 916


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 204/405 (50%), Gaps = 12/405 (2%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+ +  ILI   C    +N+    +  +   G+ P+VV +T+LI G C    I  A  LF
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC-------- 285
            ++ +LG      TY  LI GL   G      +++++M LN  SP  Y +NC        
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEM-LNDTSP--YVFNCRPNVISYS 241

Query: 286 -LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I   C  G   E   LF+EM  + V  NVVT++ LI  LCKE +V +A++LL+ M   
Sbjct: 242 IIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQI 301

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           GI PN+ TY  LI GFC  G+ + A  LF  + S G  P V++YN+LI  + K    + A
Sbjct: 302 GIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEA 361

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             L  EM   G+ P   T  +L+ +   +  ++ A E++ +++      D+    + + G
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDG 421

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           LC  G + EA KLFN +    ++ +   +  +I G CK G    A  L  ++ E+G+ P+
Sbjct: 422 LCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPD 481

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +YSS I   C+ G+  +A +L  +M + G  P +  Y+IL R 
Sbjct: 482 AMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 209/399 (52%), Gaps = 6/399 (1%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +F  LIKG C    + +A ++  +++++G +PNVV Y +LI G C  G+I  A    
Sbjct: 160 DVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWH 219

Query: 234 RKIGE------LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +++                +Y+++I GL K G  ++    + +M   GV P++ T++ LI
Sbjct: 220 QEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 279

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C EG+V +  KL + M    +  N+ TY +LI G C    +  A+ L   M   G  
Sbjct: 280 DMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYE 339

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI+YN LI+G+C   + ++A +LFN++   G  P V T  VL++A   AG    A +L
Sbjct: 340 PDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKEL 399

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R ++   +        I +D   ++  + +A ++++ ++      D+ T+G LI GLC 
Sbjct: 400 FRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCK 459

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G ++ A +LF  ++E  ++P+ + Y+ MI G+CK+G   +A  L  +M E G  P++ +
Sbjct: 460 AGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLIT 519

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           YS  +    +  K  +   LL++M++  + P   +Y I+
Sbjct: 520 YSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 211/426 (49%), Gaps = 7/426 (1%)

Query: 132 MLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGD 190
           ++  G  P   TF +L+    ++    +   LF    +     +V ++G LIKG C  G+
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 191 LNKAF----EVLNQLEEMGFS--PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
           +N A     E+LN      F+  PNV+ Y+ +IDG CK G+ E A  LF ++ + G+   
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271

Query: 245 QHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
             T++VLI  L K G      +  E M   G+ P+L+TY  LI  +C  G ++   +LF 
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV 331

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            M  +    +V++YN LI G CK ++V+EA +L ++M   G+ P+V T   L+     AG
Sbjct: 332 SMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG 391

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           + D A  LF  +K       +    + +    K G    A  L  E+E   +     T+ 
Sbjct: 392 KVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFG 451

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LID   ++  +E A+E++  + + G  PD   Y  +IHG C KG + +A+ LF  M E 
Sbjct: 452 CLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEEN 511

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
              P+ + Y++++ G+ +     + ++LL  M EK + P+   Y+    ++C+D K+ E 
Sbjct: 512 GCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEW 571

Query: 545 EVLLNQ 550
             LL +
Sbjct: 572 LDLLQR 577



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           S++++N L+         S+ F L+ +M    +  +++T N LI  LC   R+ E    +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             +   G  P+V+T+  LI G C      +A +LF +++  G +P+VVTY  LI+     
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 399 GNSKMASDLVREMEER------GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           GN  +A    +EM            P+ ++Y+I+ID   +  + E+A  +++ M   G  
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+V T+ VLI  LC +G + +A KL   M +  + PN   Y  +I G+C  G+   A  L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              M  KG  P++ SY+  I   C+  K  EA  L N+ML +G+ P V    +L +A
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 36/337 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  IID   K    ++A+  F++M+D GV+P   TF+ L+  + K     K   L     
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMI 299

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +  +++++  LIKG C  GDLN A E+   +   G+ P+V+ Y  LI+G CK   +E
Sbjct: 300 QIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVE 359

Query: 228 RAKMLFRKIGELGLVATQHTYTVL------------------------------ICGLFK 257
            A  LF ++  +G+     T  VL                              IC +F 
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFL 419

Query: 258 NGLQKDGFEF-----YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           +GL K+G+ F     + +++   +   + T+ CLI   C  GK+   ++LF+++    + 
Sbjct: 420 DGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQ 479

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            + + Y+++I G CK+ +V +A  L  +M+  G SP++ITY+ L+ GF ++ + +K  +L
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQL 539

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
            +++      P    Y ++     K    K   DL++
Sbjct: 540 LHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 216/439 (49%), Gaps = 35/439 (7%)

Query: 157 FDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           FD+   F    RC   + +V ++  L+ G  +   L     ++N +   G +PN  ++ S
Sbjct: 292 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 351

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQ 272
           L+   C   D   A  L  ++   G       Y + I   CG  K     D  +  EK  
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP-SPDLLDLAEK-- 408

Query: 273 LNGVSPSLYTYNCLIHEY---------CNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
              +   +   NC++++          C  GK  + F+L  EM  +    +  TY+ +I 
Sbjct: 409 ---IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
            LC   +V++A  L  +MKM G++P+V TY  LID FC AG  ++A  LF +++S G SP
Sbjct: 466 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 525

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY  LI A+ KA     A+D+   M + G  P++VTY  L+D   ++ ++ KAFE+Y
Sbjct: 526 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 585

Query: 444 SLM----------------QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           + +                 +   +P+V TYG L+ GLC    +  A +L ++M  +  E
Sbjct: 586 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 645

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN +VY+ +I G+CK G    A  +  +M + G +P++ +Y+S I  + +DG+   A  +
Sbjct: 646 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 705

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+QMLK    P+V  Y  +
Sbjct: 706 LSQMLKDSCTPNVVTYTAM 724



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 213/490 (43%), Gaps = 62/490 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           L   +I   +++   D+A+ + H+M  +   P   T+ +LL   +K      GW     N
Sbjct: 278 LCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL--GWCKRIIN 335

Query: 168 RCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN- 223
               E    +   F  L+   C   D   A+++LN++   G  P  V+Y   I   C   
Sbjct: 336 MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 395

Query: 224 ----------------------------------------GDIERAKMLFRKIGELGLVA 243
                                                   G  ++A  L +++   G V 
Sbjct: 396 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 455

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TY+ +I  L      +  F  +++M++ GV+P +YTY  LI  +C  G + +   LF
Sbjct: 456 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 515

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           +EMR    +  VVTY  LI    K  +V +A  +  +M  AG  PN +TY  L+DG C A
Sbjct: 516 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 575

Query: 364 GETDKAFRLFNQLKSNGQS----------------PSVVTYNVLIRAFSKAGNSKMASDL 407
           G   KAF ++ +L     S                P+VVTY  L+    KA     A +L
Sbjct: 576 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 635

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  M   G  P+ + Y  LID F ++  ++ A E++  M K G+ P V+TY  LI  +  
Sbjct: 636 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 695

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G +  A K+ + M +    PN V Y  MI G C+ G S +AL+LL  M EKG  PN+ +
Sbjct: 696 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 755

Query: 528 YSSTIGVLCQ 537
           Y++ I  L Q
Sbjct: 756 YTALIDGLGQ 765



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 205/515 (39%), Gaps = 132/515 (25%)

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------------------- 218
           +L++ CC  G  N+A E L +L++ G+ P+ V Y +L+                      
Sbjct: 179 VLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES 238

Query: 219 ---------GC-----CKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
                    GC     CK G    A  M+ R+  +L  V   H    +I GL +     +
Sbjct: 239 GFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDE 294

Query: 264 GFEFYEKMQLNGVSPSLYTY-----------------------------------NCLIH 288
              F  +M+ N   P++ TY                                   N L+H
Sbjct: 295 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 354

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL---ICG--------------------- 324
            YCNE   +  +KL + M         V YN     ICG                     
Sbjct: 355 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 414

Query: 325 -----------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                            LC   +  +A +L+ +M   G  P+  TY+K+I   C A + +
Sbjct: 415 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 474

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF LF ++K  G +P V TY +LI +F KAG  + A  L  EM   G +P+ VTYT LI
Sbjct: 475 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 534

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-- 485
            +++++  + +A +++  M  +G  P+  TYG L+ GLC  GN+ +A +++  +  T   
Sbjct: 535 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 594

Query: 486 --------------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
                         L PN V Y  ++ G CK      A  LL  M   G  PN   Y + 
Sbjct: 595 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 654

Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           I   C+ GK   A+ +  QM K G  PSV  Y  L
Sbjct: 655 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 689



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 17/328 (5%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D+A     +M+  G  P ++T++ ++ F+  +   +K +L F E +   V  DVY++ IL
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 498

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C+AG + +A  +  ++  +G SP VV YT+LI    K   + +A  +F ++ + G 
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKM----------------QLNGVSPSLYTYNC 285
                TY  L+ GL K G     FE Y K+                  + ++P++ TY  
Sbjct: 559 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 618

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C   KV    +L D M       N + Y+ LI G CK  ++  A+ +  QM   G
Sbjct: 619 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 678

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+V TY  LID     G  D A ++ +Q+  +  +P+VVTY  +I    + G S+ A 
Sbjct: 679 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 738

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRS 433
            L+  MEE+G +P+ VTYT LID   +S
Sbjct: 739 KLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 9/371 (2%)

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
            ++G+S     Y +L D    +G    A+ L R+IGE           VL+    + G+ 
Sbjct: 131 RQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMW 190

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
            +  E   +++  G  PS  TYN L+    + G+V  GF++  EM       +  T    
Sbjct: 191 NEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCF 250

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
              LCKE R  +A   LD ++      + +    +I G  +A   D+A    ++++ N  
Sbjct: 251 AHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSC 307

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
            P+VVTY  L+  F K         ++  M   G  P+   +  L+ S+    D   A++
Sbjct: 308 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 367

Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE------ASKLFNSMWETKLEPNDVVYNM 495
           + + M   G  P    Y + I  +C +  +        A K++  M       N V    
Sbjct: 368 LLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 427

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
                C  G   +A +L+ EM  KG VP+ ++YS  I  LC   K  +A +L  +M  +G
Sbjct: 428 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 487

Query: 556 LKPSVSLYNIL 566
           + P V  Y IL
Sbjct: 488 VTPDVYTYTIL 498



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 146/360 (40%), Gaps = 9/360 (2%)

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           L+  CC+ G    A     ++ + G   ++ TY  L+  L   G    GF   ++M  +G
Sbjct: 180 LVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG 239

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
                +T  C  H  C EG+ ++     D +   +   + V    +I GL +     EA 
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
             L +M+     PNV+TY  L+ GF    +     R+ N + + G +P+   +N L+ ++
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV------RSDDMEKAFEMYSLMQKS 449
               +   A  L+  M   G  P  V Y I I S          D ++ A ++Y  M  +
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
               +          LC  G   +A +L   M      P+   Y+ +I   C      +A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             L  EM   G+ P++ +Y+  I   C+ G   +A+ L  +M  +G  P+V  Y  L  A
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 219/433 (50%), Gaps = 13/433 (3%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
           +P + ++  L+  + ++   DK     +E  R K+  DV+++ ++I   C+A  +++A E
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
               + E    P+VV Y +L+ G CKNG + +A  LF  +   G+  +  TYT LI    
Sbjct: 67  FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           K    +  +   + M     SP++Y+Y  +I+  C   KV + ++LF+EM+      + V
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TYNTLI GLC + R+ EA+ LL  M      P+ IT+  LI+G C      +AF LF  +
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
              G +P +VT+ VL+         + A  +VR         + + YT +     R    
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGF 300

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE---ASKLFNSMWETKLEPNDVVY 493
           ++A  +   M + G +P+V TY     GL   G+ KE   A + F  M E  +EP+ V Y
Sbjct: 301 DRAARLLQKMARRGVAPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAY 357

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N+++ G+CK      A +++  M++ GL PNI +Y++ +G  C+ GK      LL+ M+ 
Sbjct: 358 NVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS 417

Query: 554 LGLKPSVSLYNIL 566
            G +P V+ ++ L
Sbjct: 418 RGRQPDVATWSTL 430



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 211/461 (45%), Gaps = 7/461 (1%)

Query: 95  LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS 154
           +F     P   S  Y  ++ A  ++   D+A     +M    + P   T+N ++  + K+
Sbjct: 1   IFSQDCKPNALSYCY--LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKA 58

Query: 155 CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
               +   FF       E DV ++  L+ G C+ G + +A  +   +E  G +P+ V YT
Sbjct: 59  RRISRAIEFFET---MPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYT 115

Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
           +LID  CK    E A  L + +       T ++Y  +I GL KN      ++ +E+M+L 
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA 175

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           G  P   TYN LIH  C + ++ E   L   M       + +T+  LI GLC   R++EA
Sbjct: 176 GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             L   M   G +P+++T+  L+   C   +   A  +     +  +  +V+ Y  + R 
Sbjct: 236 FVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPE--AVILYTPIFRE 293

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             +      A+ L+++M  RG+ P+ VTYT          +  +A+  +  M + G  PD
Sbjct: 294 LGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPD 353

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
           +  Y VL+ G C    +  A K+   M ++ L PN V YN ++  +C++G       LL 
Sbjct: 354 MVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLH 413

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
            M  +G  P++A++S+ +  L + G+   A   LN  +  G
Sbjct: 414 TMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 214/433 (49%), Gaps = 6/433 (1%)

Query: 136 GVRPRSNTFNSLLIFVIKS-CSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNK 193
           GV+P   ++N +L  + ++ C  D   L+    +R +V    ++FG+  +  C  G  ++
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +L  +   G  P+ V+Y ++I   C  G +  A  L  ++  +G  A  +T+  ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G+   G  ++     ++M   G  P + TY  L+   C   +  E   +      R    
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG----RVPEL 309

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVV +NT+I G   E ++ EA  L + M + G  P+  TY+ L+ G C  G    A RL 
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +++  G +P+VVTY +++ +F K G       L+ EM  +G+T +   Y  +I +  + 
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
             M++A  +   M+  G +PD+ +Y  +I+ LC    M+EA  +F ++ E  +  N + Y
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N +I    ++G    A+RL  EM   G   ++ SY+  I  +C+DG    + VLL +M +
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 554 LGLKPSVSLYNIL 566
            G+KP+   YNIL
Sbjct: 550 KGIKPNNVSYNIL 562



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 210/446 (47%), Gaps = 5/446 (1%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGI 180
           +D+AL     M   G  P +  + +++  +       +     +E        DV +F  
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++G C  G + +A  +++++   G  P V+ Y  L+ G C+    + A+ +  ++ EL 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V     +  +I G    G   +  E YE M L G  P  +TY+ L+H  C  G++    
Sbjct: 311 VV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L  EM  +  A NVVTY  ++   CK     +   LL++M   G++ N   YN +I   
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G  D+A  L  +++S G +P + +YN +I         + A  +   + E G+  + 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  +I + +R    + A  +   M   G S DV +Y  LI  +C  GN+  +  L   
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  ++PN+V YN++I   CKE     AL L  +M  +GL P+I +Y++ I  LC+ G 
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A  LL ++    + P +  YNIL
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNIL 632



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 242/521 (46%), Gaps = 48/521 (9%)

Query: 27  KAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII-SGRITSSSFT 84
           +A  L +   R+ G+Q + +S +++L +L     +  HA A  L  +++   R+  ++FT
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVL---ARADCHADALALYRRMVHRDRVPPTTFT 177

Query: 85  ---PRSLLCHLTQLFPS--------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
                  LC L +   +            V  + LY+++I A        +A    ++ML
Sbjct: 178 FGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML 237

Query: 134 DSGVRPRSNTFNSLL-----IFVIKSCS------FDKGWL-------FFSENRCKV---- 171
             G     NTF+ ++     +  ++  +        KG +       F  +  C+V    
Sbjct: 238 LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQAD 297

Query: 172 ----------ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                     EL+V  F  +I GC   G L +A E+   +   G  P+   Y+ L+ G C
Sbjct: 298 EARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G I  A  L R++ + G      TYT+++    KNG+  D     E+M   G++ +  
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
            YN +I+  C +G++ E   L  EMR +    ++ +YNT+I  LC   +++EAE + + +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+  N ITYN +I      G    A RL  ++  +G S  VV+YN LI+A  K GN 
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
             +  L+ EM E+GI P+ V+Y ILI    +   +  A E+   M   G +PD+ TY  L
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           I+GLC  G M  A  L   +    + P+ + YN++I  +CK
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 159/306 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++ IL+ G C+ G +  A  +L ++E+ GF+PNVV YT ++   CKNG  +  + L 
Sbjct: 345 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL      Y  +I  L K+G   +     ++M+  G +P + +YN +I+  CN 
Sbjct: 405 EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ E   +F+ +    V  N +TYNT+I  L ++ R Q+A RL  +M + G S +V++Y
Sbjct: 465 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSY 524

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C  G  D++  L  ++   G  P+ V+YN+LI    K    + A +L ++M  
Sbjct: 525 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 584

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P  VTY  LI+   +   M  A  +   +      PD+ TY +LI   C    + +
Sbjct: 585 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDD 644

Query: 474 ASKLFN 479
           A+ L N
Sbjct: 645 AAMLLN 650



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A+    +M   G  P   T+  +L    K+  +D       E   K + L+   +  +I 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
             C+ G +++A  ++ ++   G +P++  Y ++I   C N  +E A+ +F  + E G+VA
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-------------------------- 277
              TY  +I  L ++G  +D     ++M L+G S                          
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 278 ---------PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
                    P+  +YN LI E C E +V +  +L  +M ++ +A ++VTYNTLI GLCK 
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             +  A  LL+++    + P++ITYN LI   C     D A  L N+
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S+ Y  +I A  K    D+A+    +M   G  P   ++N+++  +  +   ++    F 
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF- 474

Query: 166 ENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           EN  +  V  +  ++  +I      G    A  +  ++   G S +VV Y  LI   CK+
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+++R+ +L  ++ E G+     +Y +LI  L K    +D  E  ++M   G++P + TY
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 594

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+  C  G +     L +++ +  V  +++TYN LI   CK   + +A  LL++  M
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR-AM 653

Query: 344 AGISP 348
           A + P
Sbjct: 654 AAVCP 658


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 185/364 (50%)

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E R     D+Y F  LI    E+G L  A E      E  F   +     +++   K   
Sbjct: 63  ETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKY 122

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +     + +I E G  A+ + + +L+    K+G  +     ++ +   G+ PS+ +YN 
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNT 182

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L++ Y   G + EGF+L   M    V  +V TY+ LI GLCKE ++ +A  L D+M + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PN +T+  LIDG C  G  D A  ++ Q+ S   SP ++TYN LI    K G+ K A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            L+ EM  +G+ P ++TYT LID   +  D++ AFE    M +     D   Y  LI GL
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G   +A K+   M    L+P+   Y M+I  +CK+G+ ++  +LL EM   G VP++
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 526 ASYS 529
            +Y+
Sbjct: 423 VTYN 426



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 15/441 (3%)

Query: 29  FSLFNWAS---RQGLQHTPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRITSSSFT 84
           FS F W S       +HT  S   ++  L + +M S + +  Q ++ +   G+ ++S+  
Sbjct: 1   FSFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSR--KGKGSASAV- 57

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
                     +  +     +   ++  +I A+L+S     A+  +    +       +T 
Sbjct: 58  -------FAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTC 110

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             +L  ++K   F   W F+ E   C     +Y F IL+   C+ GD+  A  V + + +
Sbjct: 111 RKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITK 170

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+VV Y +L++G  + GD++    L   +   G+    +TY+VLI GL K     D
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDD 230

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E +++M + G+ P+  T+  LI  +C  G+V    +++ +M  + ++ +++TYNTLI 
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK+  +++A  L+D+M + G+ P+ ITY  LIDG C  G+ D AF    ++       
Sbjct: 291 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             V Y  LI    + G S  A  ++REM   G+ P   TYT++I+ F +  D+ K  ++ 
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 444 SLMQKSGFSPDVYTYGVLIHG 464
             MQ+ G  P V TY VL++G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 153/300 (51%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ E G+  ++  +  L+   CK+GDI  A+ +F  I + GL  +  +Y  L+ G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +GF     M  +GV P +YTY+ LI+  C E K+ +  +LFDEM  + +  N VT+ 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK  RV  A  +  QM    +SP++ITYN LI G C  G+  +A  L +++   
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P  +TY  LI    K G+   A +  + M +  I   EV YT LI    +      A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M   M   G  PD  TY ++I+  C KG++ + SKL   M      P+ V YN+++ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 17/250 (6%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           +Y T+I  LC    + EA+ L+           V+   K        G     F    + 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLI----------QVVVSRK------GKGSASAVFAAILET 64

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           +   Q   +  ++ LI A+ ++G  + A +  R   E        T   +++  ++    
Sbjct: 65  RGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYF 123

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           +  +  Y  + + G+   +Y + +L+H  C  G+++ A  +F+++ +  L P+ V YN +
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTL 183

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + GY + G+     RL   M   G+ P++ +YS  I  LC++ K  +A  L ++ML  GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 557 KPSVSLYNIL 566
            P+   +  L
Sbjct: 244 VPNGVTFTTL 253


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 216/448 (48%), Gaps = 10/448 (2%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKV-----ELDVYSFGI 180
             +M   G+     T   +L  +      DK   +F   +E  C++       D  ++  
Sbjct: 52  LREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTA 111

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           ++ G  +AG+ +   E   ++      P ++ YT L+DG CK   +ERA  +F ++   G
Sbjct: 112 IVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKG 171

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
                  Y+ LI GL K G   +  +  + M   G  P+   Y  ++   C  G++ E  
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAV 231

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           K   EMR R +   V TY+ ++ G     +V+EA  ++++M     +P+ I+Y   I+  
Sbjct: 232 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEAL 291

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
              G  ++A ++F  +   G  P + TY ++I  F K G+   A+ ++R M++  + P+ 
Sbjct: 292 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 351

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
             YT+++D FV+S  +E+A E+Y  + K G  P   TY  +I+ LC    M EA +L   
Sbjct: 352 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 411

Query: 481 MWETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           M   K  LEP+ V Y+M+I G  K G   RA  LL EM + G++P+  +Y+S I  L   
Sbjct: 412 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 471

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           GK   A  LL +MLK G+ P    Y  L
Sbjct: 472 GKVSRAMELLEEMLKAGIFPDDHTYGTL 499



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 214/431 (49%), Gaps = 11/431 (2%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
           NSLL+ +++         FF  +    E +V SF IL++G     D      +L +++  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSIS--EPNVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFR-------KIGELGLVATQHTYTVLICGLFK 257
           G + N   +  ++   C   D+++A   F        ++ E        TYT ++ GLFK
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFK 118

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G    G E+YEKM  +   P+L TY  L+   C   KV     +F+EM  +    +++ 
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y++LI GL K  RV EA +L+D M   G  P  + Y  ++ G C  G   +A +   +++
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
                P V TY+ ++  +   G  + A  ++ EM +R   P  ++YT+ I++       E
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A +++  M + G  PD++TYG++I   C +G+M  A+ +   M +  ++PN  +Y M++
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 358

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM--LKLG 555
            G+ K      AL L   + + G++P+  +Y++ I  LC+  K  EA  LL +M   K  
Sbjct: 359 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE 418

Query: 556 LKPSVSLYNIL 566
           L+PS+  Y+++
Sbjct: 419 LEPSIVTYSMI 429



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 230/463 (49%), Gaps = 21/463 (4%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVR-------PRSNTFNSLLIFVIKSCSFDKGWLFF 164
           I+ A    R  D+A+ YF+   +   R       P S T+ +++  + K+ ++D G  ++
Sbjct: 70  ILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYY 129

Query: 165 SE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            +   ++C+  L  Y+  +L+ G C+A  + +A +V  ++   G  P+++ Y+SLIDG  
Sbjct: 130 EKMVASKCEPTLLTYT--VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLS 187

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G ++ A+ L   +   G   T   YT ++ GL K G  ++  +  ++M+   + P + 
Sbjct: 188 KAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 247

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY+ ++  Y   GKV E F + +EM  R+ A + ++Y   I  L    R +EAE++ + M
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 307

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G  P++ TY  +ID FC  G    A  +   +      P+   Y +++  F K+   
Sbjct: 308 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 367

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYG 459
           + A +L + + + GI PS VTY  +I++  +   M++A E+   MQ  K    P + TY 
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 427

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++IHGL   G  + A  L   M +  + P+   Y  +I      G   RA+ LL EM + 
Sbjct: 428 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 487

Query: 520 GLVPNIASYSSTIGVLCQ---DGKWPEAEVLLNQMLKLGLKPS 559
           G+ P+  +Y + + +LC+   D  W     LL +M++ G  P+
Sbjct: 488 GIFPDDHTYGTLVQILCRSDVDAAWD----LLQEMMRNGHTPN 526



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 233/518 (44%), Gaps = 60/518 (11%)

Query: 24  PPLKAFSLF--NWASRQGLQHTPQSISIILRLLLSKMSSH---SHAAAQTLILKIISGR- 77
           P + +F++    +A+R   +        ++  LL +M +    S+ A   +IL  +  R 
Sbjct: 27  PNVSSFNILLRGFAARDDFE--------VVNALLREMKARGITSNGATHGVILSALCARR 78

Query: 78  ---ITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
                 S F  R+      +LF +   P   S  Y +I+D   K+   D  L Y+ +M+ 
Sbjct: 79  DLDKAVSYFNSRTE--EACRLFEAIEAP--DSVTYTAIVDGLFKAGNYDAGLEYYEKMVA 134

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNK 193
           S   P   T+  L+  + K+   ++    F E  R   + D+ ++  LI G  +AG +++
Sbjct: 135 SKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDE 194

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI----------------- 236
           A ++++ +   G  P  V YTS++ G CK G I+ A    +++                 
Sbjct: 195 ARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 254

Query: 237 GELGLVATQH------------------TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G +G+   +                   +YT+ I  L+  G +++  + +E M   G  P
Sbjct: 255 GYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 314

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            ++TY  +I  +C EG ++    +   M    V  N   Y  ++ G  K  R++EA  L 
Sbjct: 315 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 374

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFS 396
            ++   GI P+ +TYN +I+  C   + D+A  L  +++   +   PS+VTY+++I    
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 434

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           K G  + A DL+ EM + G+ P   TYT LI +   +  + +A E+   M K+G  PD +
Sbjct: 435 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 494

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           TYG L+  LC + ++  A  L   M      PN+  + 
Sbjct: 495 TYGTLVQILC-RSDVDAAWDLLQEMMRNGHTPNEFTFK 531



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 95/182 (52%), Gaps = 4/182 (2%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y  I+D  +KS   ++AL  + ++L  G+ P + T+N+++  + K    D+      E 
Sbjct: 353 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 412

Query: 167 NRCKVELD--VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            R K EL+  + ++ ++I G  + G   +AF++L ++ + G  P+   YTSLI      G
Sbjct: 413 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 472

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            + RA  L  ++ + G+    HTY  L+  L ++ +    ++  ++M  NG +P+ +T+ 
Sbjct: 473 KVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDA-AWDLLQEMMRNGHTPNEFTFK 531

Query: 285 CL 286
            +
Sbjct: 532 AV 533


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 226/467 (48%), Gaps = 40/467 (8%)

Query: 138 RPRSNTFNSLL-IFVIKSCSFDK-GWL-FFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
           +P    +N L+  +  +  +FD  GW+ F  +N C   L   +FG +I   C  G++ +A
Sbjct: 181 QPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSL--VTFGTVINAFCNQGNMMEA 238

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
             + + ++E G  PNVV Y +L++G  K  DI +A ML+ ++    +     T+ +L+ G
Sbjct: 239 RNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAG 298

Query: 255 LFKNGLQKD-----------------------------------GFEFYEKMQLNGVSPS 279
            ++ G ++D                                     +F E M   G++P+
Sbjct: 299 HYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPT 358

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +  +N +I  Y   G   + +K +  M    +  + +T ++LI GL K  R+QEA  LL 
Sbjct: 359 VVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLY 418

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M + G+  N   +  L+DG+   G+   A+ L+N+++  G  P  V ++  I   S  G
Sbjct: 419 EMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVG 478

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
               A D+  +M ++G  P+   Y  LI  F  S  +++A  +   M + G  PD++T  
Sbjct: 479 LVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTN 538

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
           ++I+GLC +G MK AS +F +M  T L P+ V YN +I GYCK  ++     ++ +M   
Sbjct: 539 IIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYAT 598

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G  P+I +Y+  +  LC   K   A ++L +++  G+ P    YN +
Sbjct: 599 GWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTV 645



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 216/450 (48%), Gaps = 3/450 (0%)

Query: 120 RLSDQALFY--FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVY 176
           R+ D    +     M+  G RP +  FN++++   +      G  L     + K + DVY
Sbjct: 126 RIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVY 185

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++ ILI   C  G    A   +  + + G +P++V + ++I+  C  G++  A+ LF  +
Sbjct: 186 AYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGM 245

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G +     Y  L+ G  K          YE+M+   V+P   T+N L+  +   G+ 
Sbjct: 246 KEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGRE 305

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
            +  +L  ++           YN  + GLC    + EA + L+ M   GI+P V+ +N +
Sbjct: 306 EDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSI 365

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I  +  AG  +KA++ +  +   G  PS +T + LI   SK    + A DL+ EM   G+
Sbjct: 366 IAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGL 425

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             ++  +T+L+D + R  D+  A+ +++ M+  G  PD   +   I+GL + G + EA  
Sbjct: 426 PINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYD 485

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
           +F  M +    PN+ VYN +I G+C  G    AL L  EM  KGL+P+I + +  I  LC
Sbjct: 486 VFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLC 545

Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++G+   A  +   M   GL P +  YN L
Sbjct: 546 KEGRMKSASDVFRNMHHTGLIPDIVTYNTL 575



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 212/445 (47%), Gaps = 3/445 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           Y ++++ ++K+R   QA   + +M    V P   TFN L+    +     D+  L    +
Sbjct: 257 YNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +         + I + G C AG L++A + L  + E G +P VV + S+I    + G  E
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A   +R + + GL  +  T + LI GL K    ++  +   +M + G+  +   +  L+
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLL 436

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G V+  + L++EM  R +  + V ++  I GL     V EA  +  QM   G  
Sbjct: 437 DGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM 496

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN   YN LI GFC++G   +A  L  ++   G  P + T N++I    K G  K ASD+
Sbjct: 497 PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDV 556

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R M   G+ P  VTY  LID + ++ D     E+ + M  +G+ PD+ TY + +HGLC 
Sbjct: 557 FRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCT 616

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              M  A  +   +    + P+ V YN ++ G C +    RA+ +  ++ +   VPN+ +
Sbjct: 617 GRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLE-RAMIVTAKLLKMAFVPNVVT 675

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQML 552
            +  +   C+ G  PE  ++  Q L
Sbjct: 676 ANLLLSHFCKQGM-PEKTIMWGQKL 699



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 189/442 (42%), Gaps = 35/442 (7%)

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
           F  +   + E D      L++G  +     +A E++ ++ E+G  P+    T L     +
Sbjct: 67  FMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLR 126

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            GD      L R +   G       +  +I G  + G  K G      MQ     P +Y 
Sbjct: 127 IGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYA 186

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           YN LI+ YC  G+  +       M       ++VT+ T+I   C +  + EA  L D MK
Sbjct: 187 YNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMK 246

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
            AG  PNV+ YN L++G+  A +  +A  L+ ++KS   +P   T+N+L+    + G  +
Sbjct: 247 EAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREE 306

Query: 403 MASDLVR-----------------------------------EMEERGITPSEVTYTILI 427
               L+R                                   +M E+GITP+ V +  +I
Sbjct: 307 DRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
            ++ R+   EKA++ Y +M K G  P   T   LI GL     ++EA  L   M    L 
Sbjct: 367 AAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLP 426

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N   + +++ GY + G+   A  L  EM  +G+ P+  ++S+ I  L   G   EA  +
Sbjct: 427 INKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDV 486

Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
             QM K G  P+  +YN L R 
Sbjct: 487 FLQMSKKGFMPNNFVYNSLIRG 508



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 13/300 (4%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFY--FHQMLDSGVRPRSNTF----NSLLIFVIKSC 155
           P+ K+  +  ++D +   R+ D A  Y  +++M   G+ P +  F    N L I  +   
Sbjct: 426 PINKAA-FTLLLDGYF--RMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDE 482

Query: 156 SFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
           ++D   +F   ++     + + +  LI+G C +G L +A  +  ++   G  P++     
Sbjct: 483 AYD---VFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNI 539

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           +I+G CK G ++ A  +FR +   GL+    TY  LI G  K        E   KM   G
Sbjct: 540 IINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATG 599

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P + TYN  +H  C   K+S    + +E+    V  + VTYNT++ G+C ++  +   
Sbjct: 600 WDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAMI 659

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
                +KMA + PNV+T N L+  FC  G  +K      +L         ++  ++ RA+
Sbjct: 660 VTAKLLKMAFV-PNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGFDEISIKLMDRAY 718



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)

Query: 76  GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           GR+ S+S   R++  H T L P   + VT    Y ++ID + K+  +       ++M  +
Sbjct: 548 GRMKSASDVFRNM--HHTGLIP---DIVT----YNTLIDGYCKAFDTVSTDEVVNKMYAT 598

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKA 194
           G  P   T+N  L  +       +  +   E     V  D  ++  ++ G C    L +A
Sbjct: 599 GWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC-TDVLERA 657

Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
             V  +L +M F PNVV    L+   CK G  E+  M  +K+ E+
Sbjct: 658 MIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEI 702


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 212/450 (47%), Gaps = 15/450 (3%)

Query: 112 IIDAHLKSRLSDQAL-FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I A+  S L ++AL  Y+  +      P     NSLL  ++K                +
Sbjct: 135 VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVK--------------LGR 180

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E+      I++KG C+ G L +  +++      G  PN++ Y +LIDG CK GD+E A 
Sbjct: 181 IEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMAN 240

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++   G + T  TY  +I G  K G  K       +M   G++ ++  YN +I   
Sbjct: 241 GLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDAR 300

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
              G + +  +  + M       ++VTYNTLI G C++ +V EA++LL+Q    G+ PN 
Sbjct: 301 YKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNK 360

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            +Y  LI  +C  G  D+A     ++   G  P +VTY  L+     AG   +A  +  +
Sbjct: 361 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 420

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M ERG+ P    Y IL+    +   +  A  + + M      PD + Y  L+ G    GN
Sbjct: 421 MLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGN 480

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + EA KLF    E  + P  V YN MI GYCK G    A+  +  M ++ L P+  +YS+
Sbjct: 481 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 540

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            I    +      A+ +  +M+K+  KP+V
Sbjct: 541 VIDGYVKQHDLDGAQKMFREMVKMKCKPNV 570



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 190/394 (48%), Gaps = 16/394 (4%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLN-QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
           +  I+I+   ++G + KA E+    L+   + P+V+   SL++   K G IE        
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIE-------- 182

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
                 +A + T  +++ GL K G  ++G +  E     G  P++  YN LI  YC +G 
Sbjct: 183 ------IARKFT-CIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGD 235

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           +     LF E++ +     V TY  +I G CK+   +  +RLL +M   G++ NV  YN 
Sbjct: 236 MEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNT 295

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +ID     G   KA      +   G  P +VTYN LI    + G    A  L+ +   +G
Sbjct: 296 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 355

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P++ +YT LI ++ +    ++A      M + G  PD+ TYG L+HGL + G +  A 
Sbjct: 356 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 415

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
            +   M E  + P+  +YN+++ G CK+     A  LL EM ++ ++P+   Y++ +   
Sbjct: 416 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGF 475

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++G   EA  L    ++ G+ P +  YN + + 
Sbjct: 476 IRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 509



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 23/297 (7%)

Query: 296 VSEGFKLFDEMRHREVA--CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           V  G K FD +   + +   N   Y++L+  L +     E E +L+ M++  +SP     
Sbjct: 73  VELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM 132

Query: 354 NKLIDGFCDAGETDKAFRLFN-QLKSNGQSPSVVTYN--------------------VLI 392
           + +I  + D+G  +KA  L+   LK+    P V+  N                    +++
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMV 192

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
           +   K G  +    L+ +   +G  P+ + Y  LID + +  DME A  ++  ++  GF 
Sbjct: 193 KGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFL 252

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P V TYG +I+G C KG+ K   +L   M    L  N  VYN +I    K G+  +A+  
Sbjct: 253 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 312

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +  M E G  P+I +Y++ I   C+DGK  EA+ LL Q L  GL P+   Y  L  A
Sbjct: 313 IEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 369



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 1/281 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           ++Y +IIDA  K     +A+     M++ G +P   T+N+L+    +     +      +
Sbjct: 291 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ 350

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              K +  + +S+  LI   C+ G  ++A   L ++ E G  P++V Y +L+ G    G+
Sbjct: 351 ALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE 410

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++ A  +  K+ E G+      Y +L+ GL K            +M    V P  + Y  
Sbjct: 411 VDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT 470

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+  +   G + E  KLF+    + +   +V YN +I G CK   +++A   +++MK   
Sbjct: 471 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 530

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           ++P+  TY+ +IDG+    + D A ++F ++      P+V+
Sbjct: 531 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 21/205 (10%)

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
            Y+ L++  +++        ++  M    ++P+    +I+I ++  S  +EKA E+Y  +
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 447 QKS-GFSPDVYTYG--------------------VLIHGLCMKGNMKEASKLFNSMWETK 485
            K+  + PDV                        +++ GLC +G ++E  KL    W   
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQG 215

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             PN + YN +I GYCK+G+   A  L  E+  KG +P + +Y + I   C+ G +   +
Sbjct: 216 CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAID 275

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAK 570
            LL +M   GL  +V +YN +  A+
Sbjct: 276 RLLMEMNSRGLTVNVQVYNTIIDAR 300


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 234/485 (48%), Gaps = 12/485 (2%)

Query: 97  PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
           PS S+   ++RL  SI            ++ +FH+ML     P    FN L   V KS  
Sbjct: 32  PSISDAAARTRLLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQH 91

Query: 157 FDKGW-LFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
           F     L  + +    E+ DV +  ILI   C        F VL  + ++G  P +V   
Sbjct: 92  FATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLN 151

Query: 215 SL------IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           ++      ++G CK GD   A    +K+ +  L      Y  ++ GL K GL  +    +
Sbjct: 152 TIANGLCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLF 211

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNE-GKVSEGFKLFDEM-RHREVACNVVTYNTLICGLC 326
            +M +  V P++ TYNCLI   C E G   EG  LF+EM   + +  +V T++ L+ G C
Sbjct: 212 YEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFC 271

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS--PS 384
           KE  +  AE ++  M   G+  NV+TYN LI G+C     ++A R+F+ +   G+   PS
Sbjct: 272 KEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPS 331

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           VVTYN LI  + K      A  L+ EM  +G+ P   T+T LI  F        A E++ 
Sbjct: 332 VVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFI 391

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M+  G  P + T  V++ GL       EA  LF +M ++ L+ + V+YN+M+ G CK G
Sbjct: 392 TMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMG 451

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
               A +LL  +  KGL  +  +++  I  LC++G   +AE LL +M + G  P+   YN
Sbjct: 452 KLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYN 511

Query: 565 ILYRA 569
           +  + 
Sbjct: 512 VFVQG 516



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 13/367 (3%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL----F 163
           +Y +I+D   K  L  +AL  F++M    V P   T+N L   +   C    GW      
Sbjct: 190 VYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCL---IQGLCGEVGGWREGVGL 246

Query: 164 FSENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           F+E   +  +  DV +F IL+ G C+ G L +A  ++  +  +G   NVV Y SLI G C
Sbjct: 247 FNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306

Query: 222 KNGDIERAKMLFR---KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
               +E A  +F    + GE G + +  TY  LI G  K            +M   G+ P
Sbjct: 307 LRNRMEEAVRVFDLMVREGE-GCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDP 365

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
            ++T+  LI  +   GK     +LF  M+ +     + T   ++ GL K     EA  L 
Sbjct: 366 DVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLF 425

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
             M+ +G+  +++ YN ++DG C  G+ + A +L + +   G      T+N++I+   + 
Sbjct: 426 RAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCRE 485

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    A +L+R+M+E G  P++ +Y + +   +R  D+ ++ +   +M+  GF  D  T 
Sbjct: 486 GLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTA 545

Query: 459 GVLIHGL 465
            +LI  L
Sbjct: 546 ELLIRFL 552



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 110/222 (49%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V ++  LI G C+   +NKA  +L+++   G  P+V  +TSLI G  + G    AK LF 
Sbjct: 332 VVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFI 391

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
            + + G V    T  V++ GL+K  L  +    +  M+ +G+   +  YN ++   C  G
Sbjct: 392 TMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMG 451

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
           K+++  KL   +  + +  +  T+N +I GLC+E  + +AE LL +MK  G  PN  +YN
Sbjct: 452 KLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYN 511

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
             + G     +  ++ +    +K  G      T  +LIR  S
Sbjct: 512 VFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLS 553


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 216/433 (49%), Gaps = 12/433 (2%)

Query: 145 NSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE- 202
           N+LL  + K+  F K  L   + +   ++  V +FGILI   C+   ++ A EV  +++ 
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKG 215

Query: 203 -----EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
                ++  +P+ ++Y +LIDG CK G  E A  L  K+       T  T+  LI G  +
Sbjct: 216 EKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCR 275

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
           +G  +   + + +M+   + P++ T N L+   C   ++S   + F  M+ + +  N VT
Sbjct: 276 SGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVT 335

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y   I   C    + +A   LD+M   G  P+ + Y  LI G   AG  D A  + ++LK
Sbjct: 336 YTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLK 395

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G     V YNVLI  F K      A + + EME  G+ P  VTY  LI  F +  + +
Sbjct: 396 EAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFK 455

Query: 438 KAFE-MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM--WETKLEPNDVVYN 494
            A + M  + ++ G SP V+TYG LIH  C+  N+ EA K+F  M    +K+ PN V+YN
Sbjct: 456 LAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYN 515

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW-PEAEVLLNQMLK 553
           ++I   CK+     AL LL +M  +G++PN  +Y+S    L +D  W  +A  L+++M++
Sbjct: 516 ILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL-RDKNWLDKAFKLMDRMVE 574

Query: 554 LGLKPSVSLYNIL 566
               P      IL
Sbjct: 575 QACNPDYITMEIL 587



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 200/418 (47%), Gaps = 12/418 (2%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-------ENRCK 170
           K+R   +      +M D  ++P   TF  L+  + K    D     F        E +  
Sbjct: 164 KAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVF 223

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V  D   +  LI G C+ G   +A  ++ ++     +P    +  LI+G C++G+IE A 
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LF ++    +     T   L+ G+ K+       EF+  MQ  G+  +  TY   I+ +
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAF 343

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           CN   +++  +  DEM       + V Y TLICGL +  R+ +A  ++ ++K AG   + 
Sbjct: 344 CNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR 403

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           + YN LI  FC   + D+A    N+++  G  P  VTYN LI  FSK GN K+A   +++
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463

Query: 411 M-EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK--SGFSPDVYTYGVLIHGLCM 467
           M EE G++P+  TY  LI ++  ++++++A +++  M    S   P+   Y +LI  LC 
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCK 523

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY-RALRLLGEMNEKGLVPN 524
           +  +  A  L + M    + PN   YN  IF   ++ N   +A +L+  M E+   P+
Sbjct: 524 QTQVNFALSLLDDMKFRGVMPNTTTYN-SIFKALRDKNWLDKAFKLMDRMVEQACNPD 580



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 4/374 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y ++ID   K    ++AL    +M      P + TFN L+    +S   +     F+E 
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
              ++E +V +   L+ G C+   ++ A E    +++ G   N V YT  I+  C   ++
Sbjct: 290 ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNM 349

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A     ++ + G       Y  LICGL + G   D      K++  G       YN L
Sbjct: 350 NKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVL 409

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAG 345
           I E+C + K+    +  +EM    V  + VTYNTLI    K    + A + + +M +  G
Sbjct: 410 ISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKM 403
           +SP V TY  LI  +C     D+A ++F ++ +      P+ V YN+LI +  K      
Sbjct: 470 LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNF 529

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+ +M+ RG+ P+  TY  +  +    + ++KAF++   M +   +PD  T  +L  
Sbjct: 530 ALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTE 589

Query: 464 GLCMKGNMKEASKL 477
            L   G + +  K 
Sbjct: 590 WLSAVGEITKLKKF 603



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 16/328 (4%)

Query: 255 LFKNGLQKDGFE----------FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFD 304
           +F N L+ DG E             K   + + P       LI + C  G  +  + + D
Sbjct: 82  VFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILD 141

Query: 305 EMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
            +       +    N L+ GL K     +   L+ +MK   I P VIT+  LI+  C   
Sbjct: 142 NLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFR 201

Query: 365 ETDKAFRLFNQLKSNGQ------SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             D A  +F ++K   +      +P  + YN LI    K G  + A  L+ +M      P
Sbjct: 202 RIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAP 261

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
           +  T+  LI+ + RS ++E A ++++ M+ +   P+V T   L+ G+C    +  A + F
Sbjct: 262 TTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFF 321

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             M +  L+ N+V Y + I  +C   N  +A+  L EM++ G  P+   Y + I  L Q 
Sbjct: 322 RVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQA 381

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+  +A  +++++ + G       YN+L
Sbjct: 382 GRLDDASSVVSKLKEAGFCLDRVCYNVL 409



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 14/304 (4%)

Query: 284 NCLIHEYCNEGKVSEGFKLFDEM-------RHREVACNVVTYNTL-ICGLCKEMRVQEAE 335
           N +I+     G+V     + DEM       R  +    +V  N L I GL   ++  E  
Sbjct: 43  NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIA 102

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            L+ +     I P+ I   +LI   C +G T+ A+ + + L            N L+   
Sbjct: 103 GLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGL 162

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ------KS 449
            KA      + L+R+M++  I P+ +T+ ILI+   +   ++ A E++  M+      K 
Sbjct: 163 GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKV 222

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
             +PD   Y  LI GLC  G  +EA  L   M   +  P    +N +I GYC+ G    A
Sbjct: 223 FVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVA 282

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +L  EM    + PN+ + ++ +  +C+  +   A      M + GLK +   Y +   A
Sbjct: 283 HKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINA 342

Query: 570 KNNI 573
             N+
Sbjct: 343 FCNV 346


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 192/376 (51%), Gaps = 2/376 (0%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A +V   +   GF P++   T L++   K         +++K+  +G+V   H + VLI 
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
              K+G  +   +   +M+   + P L+TYN LI  YC +G   E   + D M    V+ 
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++VTYN+LI G C+E R++EA RL  ++   G +PN +TY  LIDG+C   + ++A RL 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             ++  G  P VVTYN ++R   + G  K A+ L+ EM ER + P  VT   LI+++ + 
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            DM  A ++   M ++G  PD +T+  LIHG C    +  A +    M +    P+   Y
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + ++  Y  + N    +RL  E++ KGL  +I+ Y + I  LC+  K   AE +   M  
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQG 503

Query: 554 LGLKPSVSLYNILYRA 569
            G+K    +Y  L  A
Sbjct: 504 KGMKGDSVVYTSLAYA 519



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 245/539 (45%), Gaps = 51/539 (9%)

Query: 28  AFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKI-ISGRITSSSFT 84
           +++ F W  S     H+ QS   ++  L    + H     AQ L+ +I +   ++S S  
Sbjct: 58  SWAFFKWVESNLNHXHSLQSSWTMIHTL----AKHKQFKTAQNLLERIAVRDYLSSPSVL 113

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              +  H         +P + S++   ++  +  SR++  A+  F  M   G +P     
Sbjct: 114 NAVVRIH--------DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPH---- 161

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
                  + +C+                       +L+    +A   N  ++V  ++  +
Sbjct: 162 -------LHACT-----------------------VLLNSLAKARLTNMVWKVYKKMVRV 191

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PN+ I+  LI  CCK+GD+E+A+ L  ++    +     TY  LI    K G+  + 
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               ++M+  GVSP + TYN LI+ +C EG++ E  +LF E+       N VTY TLI G
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDG 309

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C+   ++EA RL + M++ G+ P V+TYN ++   C+ G+   A RL N++      P 
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            VT N LI A+ K G+   A  + ++M E G+ P + T+  LI  F +  +++ A E   
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLF 429

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M  +GFSP   TY  L+     + N +   +L + +    L  +  VY  +I   CK  
Sbjct: 430 EMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKID 489

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               A R+   M  KG+  +   Y+S      + GK   A  +L++M K  L  ++ +Y
Sbjct: 490 KIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 191/395 (48%), Gaps = 3/395 (0%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK- 170
           ++++  K+RL++     + +M+  GV P  + FN L+    KS   +K     +E   + 
Sbjct: 168 LLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF 227

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +  D++++  LI   C+ G   +A  + +++E  G SP++V Y SLI G C+ G +  A 
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            LFR+I   G      TYT LI G  +    ++     E M++ G+ P + TYN ++ + 
Sbjct: 288 RLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL 345

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C EGK+ +  +L +EM  R+V  + VT NTLI   CK   +  A ++  +M  AG+ P+ 
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQ 405

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
            T+  LI GFC   E D A     ++   G SPS  TY+ L+ ++    N +    L  E
Sbjct: 406 FTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDE 465

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           +  +G+      Y  LI    + D +E A  +++LMQ  G   D   Y  L +     G 
Sbjct: 466 LSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGK 525

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
              AS + + M + +L     +Y      Y  +G+
Sbjct: 526 AIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGS 560



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 129/238 (54%), Gaps = 2/238 (0%)

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           Q+A ++ + M++ G  P++     L++    A  T+  ++++ ++   G  P++  +NVL
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I A  K+G+ + A  L+ EME R I P   TY  LI  + +     +A  +   M++ G 
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           SPD+ TY  LI+G C +G M+EA +LF  +      PN V Y  +I GYC+  +   ALR
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L   M  +GL P + +Y+S +  LC++GK  +A  LLN+M +  ++P     N L  A
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINA 379



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 4/210 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           ++I+A+ K      A+    +ML++G++P   TF +L+    K    D    F  E    
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 171 VELDVYS-FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                YS +  L+    +  +      + ++L   G   ++ +Y +LI   CK   IE A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           + +F  +   G+      YT L    FK G      +  ++M    +  +L  Y C    
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSAS 554

Query: 290 YCNEGKVSEGFKLFDE-MRHREVACNVVTY 318
           Y  +G +   F  +D  +  R ++ N++ Y
Sbjct: 555 YAGDGSILGLF--WDHVIERRLISKNILKY 582


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 34/550 (6%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           PL    L+ WASR G QH  +  S+   L  + +       +  L+  +           
Sbjct: 89  PLLCVRLYVWASRFG-QHFARDRSVRRALGDALLRRGPVVLSAALVADV----------- 136

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
            RS  C +++             L  +++++  +  L+  A   F Q+   G+RP +  +
Sbjct: 137 -RSCGCEVSE------------ELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIY 183

Query: 145 NSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           N+++   +++ + D  +L F +   + C+   D +++  L+ G C  G +++A  ++ Q+
Sbjct: 184 NAVIAASVRAGAVDAAYLRFQQMPADGCRP--DCFTYNTLVHGVCRRGIVDEALRLVKQM 241

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           E  G  PNVV YT L+DG C    +E A  +  ++ E G+ AT+ TY  L+ G F+   +
Sbjct: 242 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEK 301

Query: 262 KDGFEFYEKMQLNGVSPSLYT--YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           +  +    +   +   P+L++  Y+ L++         E  +L  +M  R       T++
Sbjct: 302 ERAYRMLSEWIES--DPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFS 359

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I    K +   +   L+D     G +     Y  +I  F    +  KA + F+Q+ S+
Sbjct: 360 IVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSD 419

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   SV +YN++I  F+KAG  + A + ++ M+E G +P+ VT+  LI+ +++  ++  A
Sbjct: 420 GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDA 479

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                ++ + G  PDV T+  LI GLC    + +A   F+ M E  + PN   YN++I G
Sbjct: 480 KAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHG 539

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            C  G+  +A+ LL +M   G+ P+  S+++ I   C+  K  +A+ L N M + G+ P 
Sbjct: 540 LCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPD 599

Query: 560 VSLYNILYRA 569
              YN L +A
Sbjct: 600 SYTYNALIKA 609



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 135/253 (53%), Gaps = 5/253 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKS---C-SFDKGWLFFSENRCKVELD-VYSFGILIKGC 185
           +++D  ++   N    + I +IKS   C    K   +FS+      L  V S+ I+I   
Sbjct: 376 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 435

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
            +AG++ +A E +  ++E GFSPN+V + +LI+G  K G++  AK   + + E GL+   
Sbjct: 436 AKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDV 495

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+T LI GL       D F  + +M   GV P++ TYN LIH  C+ G VS+  +L ++
Sbjct: 496 ITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNK 555

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M+   +  +  ++N  I   C+  ++++A++L + M   G+SP+  TYN LI   CD   
Sbjct: 556 MKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERR 615

Query: 366 TDKAFRLFNQLKS 378
            D+A  +   ++S
Sbjct: 616 VDEAKEIILAMES 628



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 172/376 (45%), Gaps = 4/376 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++    +    ++A     + ++S     S  +++LL + +     DK  +  ++  
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLL-YCLSKNDMDKEAVELAKKM 346

Query: 169 CKVE--LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K    L   +F I+I    +  + +   E+++   + G +    +Y  +I    +  DI
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDI 406

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A   F ++   GL+++  +Y ++I    K G  +   E  + MQ +G SP+L T+N L
Sbjct: 407 SKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTL 466

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ Y   G V +       +    +  +V+T+ +LI GLC   ++ +A     +M   G+
Sbjct: 467 INGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGV 526

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TYN LI G C AG   KA  L N++K +G +P   ++N  I +F +    + A  
Sbjct: 527 RPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQK 586

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGL 465
           L  +M   G++P   TY  LI +      +++A E+   M+  S      +TY  ++  L
Sbjct: 587 LFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGAL 646

Query: 466 CMKGNMKEASKLFNSM 481
              G   EA    N +
Sbjct: 647 TKMGRFSEAGMFMNKL 662


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 194/399 (48%), Gaps = 1/399 (0%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG-FSPNVVIYTSLIDGCCKNGDIE 227
           C    DV ++  LI G C+AGD ++A ++  +L++ G   PN V + +L+   CK     
Sbjct: 5   CDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRAT 64

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F+++   GL A  +    LI    + G+ +        M  +     ++TY+ L+
Sbjct: 65  DALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLM 124

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                 G+ ++  ++F  M+      + V YN LI  L K+ +V EA  LL+ M   GI 
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  TYN +ID     G  +KA+  F  +K    SP VVTYN L+    K   +  A DL
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 244

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM+     P   T+  LID+  ++  ME A E  + + K G  P+ Y Y  LI G C 
Sbjct: 245 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCR 304

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + +  +LF  M E    P+ + Y +++ G+ + G++  A+ LL EM  +G  P +A+
Sbjct: 305 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 364

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I  L   G+  +A  L  +M+  G  P +  Y+ L
Sbjct: 365 YNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 2/344 (0%)

Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYS 177
           SR +D AL  F +ML +G++   N  N+L+    +     +   L          LDV++
Sbjct: 61  SRATD-ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFT 119

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +  L+    +AG   KA EV + +++ G  P+ V+Y  LI    K G ++ A  L   + 
Sbjct: 120 YSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 179

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G++    TY ++I  L   G  +  + F+  M+    SP + TYN L++      +  
Sbjct: 180 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 239

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
           E   LFDEM+  +   ++ T+ TLI  L K  R+++A     ++   G  PN   YN LI
Sbjct: 240 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALI 299

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            GFC +G+ DK + LF  +      P  +TY +L+  FS+ G++ MA +L++EM   G T
Sbjct: 300 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 359

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           P+  TY +LI S   +  +E A+ ++  M   GF+PD+ TY  L
Sbjct: 360 PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 173/364 (47%), Gaps = 1/364 (0%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH-TYTVLICGLFKNGLQKDGF 265
           +P+VV Y +LI G CK GD +RA  +FR++ + G       ++  L+  L K     D  
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
             +++M   G+   +   N LIH  C  G + +  +L   M       +V TY+ L+  L
Sbjct: 68  AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            K  R  +A  +   M+ AG  P+ + YN LI      G+ D+A  L   +   G  P  
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 187

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
            TYN++I   S  G  + A      M+ R  +P  VTY  L++   +    ++A +++  
Sbjct: 188 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 247

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           MQ +   PD+ T+G LI  L   G M++A +    + +    PN  +YN +I G+C+ G 
Sbjct: 248 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQ 307

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
             +   L  +M E    P+  +Y+  +    + G    A  LL +M++ G  P+++ YN+
Sbjct: 308 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 367

Query: 566 LYRA 569
           L R+
Sbjct: 368 LIRS 371



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  ++DA  K+  + +AL  F  M  +G  P +  +N L+  + K    D+      + N
Sbjct: 120 YSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 179

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  +  D  ++ I+I      G   KA+     ++    SP+VV Y +L++G  K    +
Sbjct: 180 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 239

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF ++     +    T+  LI  L K G  +D  E   ++   G  P+ Y YN LI
Sbjct: 240 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALI 299

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C  G+V +G++LF +M       + +TY  L+ G  +      A  LL +M   G +
Sbjct: 300 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 359

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           P + TYN LI     AG+ + A+ LF ++ + G +P + TY+ L
Sbjct: 360 PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFF-- 164
           +Y  +I    K    D+AL     M   G+ P   T+N ++I V+ SC  ++K + FF  
Sbjct: 154 VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYN-IVIDVLSSCGRYEKAYSFFGM 212

Query: 165 -------------------------SENRC---------KVELDVYSFGILIKGCCEAGD 190
                                    ++  C         K   D+ +FG LI    +AG 
Sbjct: 213 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 272

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           +  A E   +L +MG  PN  IY +LI G C++G +++   LF+ + E        TYT+
Sbjct: 273 MEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 332

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           L+ G  + G      E  ++M   G +P+L TYN LI      G+V + + LF EM  + 
Sbjct: 333 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392

Query: 311 VACNVVTYNTL 321
              ++ TY+ L
Sbjct: 393 FNPDMQTYSAL 403


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 192/376 (51%), Gaps = 2/376 (0%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A +V   +   GF P++   T L++   K         +++K+  +G+V   H + VLI 
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
              K+G  +   +   +M+   + P L+TYN LI  YC +G   E   + D M    V+ 
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           ++VTYN+LI G C+E R++EA RL  ++   G +PN +TY  LIDG+C   + ++A RL 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             ++  G  P VVTYN ++R   + G  K A+ L+ EM ER + P  VT   LI+++ + 
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            DM  A ++   M ++G  PD +T+  LIHG C    +  A +    M +    P+   Y
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           + ++  Y  + N    +RL  E++ KGL  +I+ Y + I  LC+  K   AE +   M  
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQG 503

Query: 554 LGLKPSVSLYNILYRA 569
            G+K    +Y  L  A
Sbjct: 504 KGMKGDSVVYTSLAYA 519



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 246/539 (45%), Gaps = 51/539 (9%)

Query: 28  AFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSH-AAAQTLILKI-ISGRITSSSFT 84
           +++ F W  S    +H+ QS   ++  L    + H     AQ L+ +I +   ++S S  
Sbjct: 58  SWAFFKWVESNLNHKHSLQSSWTMIHTL----AKHKQFKTAQNLLERIAVRDYLSSPSVL 113

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
              +  H         +P + S++   ++  +  SR++  A+  F  M   G +P     
Sbjct: 114 NAVVRIH--------DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPH---- 161

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
                  + +C+                       +L+    +A   N  ++V  ++  +
Sbjct: 162 -------LHACT-----------------------VLLNSLAKARLTNMVWKVYKKMVRV 191

Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
           G  PN+ I+  LI  CCK+GD+E+A+ L  ++    +     TY  LI    K G+  + 
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
               ++M+  GVSP + TYN LI+ +C EG++ E  +LF E+       N VTY TLI G
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDG 309

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
            C+   ++EA RL + M++ G+ P V+TYN ++   C+ G+   A RL N++      P 
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            VT N LI A+ K G+   A  + ++M E G+ P + T+  LI  F +  +++ A E   
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLF 429

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M  +GFSP   TY  L+     + N +   +L + +    L  +  VY  +I   CK  
Sbjct: 430 EMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKID 489

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
               A R+   M  KG+  +   Y+S      + GK   A  +L++M K  L  ++ +Y
Sbjct: 490 KIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 129/238 (54%), Gaps = 2/238 (0%)

Query: 332 QEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVL 391
           Q+A ++ + M++ G  P++     L++    A  T+  ++++ ++   G  P++  +NVL
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 392 IRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
           I A  K+G+ + A  L+ EME R I P   TY  LI  + +     +A  +   M++ G 
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
           SPD+ TY  LI+G C +G M+EA +LF  +      PN V Y  +I GYC+  +   ALR
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           L   M  +GL P + +Y+S +  LC++GK  +A  LLN+M +  ++P     N L  A
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINA 379



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 4/210 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           ++I+A+ K      A+    +ML++G++P   TF +L+    K    D    F  E    
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 171 VELDVYS-FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
                YS +  L+    +  +      + ++L   G   ++ +Y +LI   CK   IE A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           + +F  +   G+      YT L    FK G      +  ++M    +  +L  Y C    
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSAS 554

Query: 290 YCNEGKVSEGFKLFDE-MRHREVACNVVTY 318
           Y  +G +   F  +D  +  R ++ N++ Y
Sbjct: 555 YAGDGSILGLF--WDHVIERRLISKNILKY 582


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 212/420 (50%), Gaps = 30/420 (7%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           ++ D+ +  ILI        LN AF VL ++ ++G+ P+ V  T+L+ G C N ++++A 
Sbjct: 6   IQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKAL 65

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQK---------------------DGFEFYE 269
                +   G      +Y  LI GL K+G  K                     D ++ Y 
Sbjct: 66  HFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYC 125

Query: 270 KMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM 329
           +M +  + P + TYN LI+ +C  G++ +  +LF+EMR + +  NV ++N LI GLCKE 
Sbjct: 126 EMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEG 185

Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYN 389
            V+  + +L  M    + P+V+T + LIDG+    + +KA  +FN +  NG +  + +YN
Sbjct: 186 DVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYN 245

Query: 390 VLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKS 449
           ++I   SKA     A  L +EM+ + +TP  +TY+ LID   +   +   +++   M+ +
Sbjct: 246 IMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRAT 305

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G S +V TY  L++ LC  G+   A ++F  + +   EPN V YN+++ G CK G    A
Sbjct: 306 GRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDA 365

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             +  ++  KG   ++  Y+  I  LC++  + EA          G  P+   Y I+ RA
Sbjct: 366 QEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEIIIRA 416



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 159/331 (48%), Gaps = 16/331 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  II+   K +L   A   + +M+   + P   T+N+L+         +     F+E 
Sbjct: 103 MYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEM 162

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           R K +  +V SF ILI G C+ GD+     VL  + +    P+VV  +SLIDG       
Sbjct: 163 RLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKA 222

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A+ +F  + + G+     +Y ++I GL K  +  +    +++MQ   ++P   TY+ L
Sbjct: 223 NKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTL 282

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I      G++S  + L DEMR    + NV+TY++L+  LCK      A R+  ++K  G 
Sbjct: 283 IDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGF 342

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PN++TYN L+DG C  G    A  +F+ L   G    V  Y V+I              
Sbjct: 343 EPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMING------------ 390

Query: 407 LVREM---EERGITPSEVTYTILIDSFVRSD 434
           L RE    E  G TP+ VTY I+I +  ++D
Sbjct: 391 LCREALFDEAYGCTPNAVTYEIIIRALFKND 421



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 149/352 (42%), Gaps = 56/352 (15%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M+L G+   +   + LI+ + +  +++  F +  ++       + VT  TL+ GLC    
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET-----------------DK----A 369
           V++A    D +   G   + ++Y  LI+G C +GET                 DK    A
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
           + L+ ++      P VVTYN LI  F   G  + A  L  EM  + I P+  ++ ILID 
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYT-------------------------------- 457
             +  D++    + ++M K    PDV T                                
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240

Query: 458 ---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
              Y ++I+GL     + EA  LF  M    + P+ + Y+ +I G  K G       L+ 
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           EM   G   N+ +YSS + VLC+ G +  A  +  ++   G +P++  YNIL
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNIL 352



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 47/164 (28%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N +T    Y S+++   KS   D A+  F ++ D G  P   T+N             
Sbjct: 308 SANVIT----YSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYN------------- 350

Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
                                IL+ G C+ G L  A E+ + L   G+  +V +YT +I+
Sbjct: 351 ---------------------ILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMIN 389

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           G C+    + A          G      TY ++I  LFKN   K
Sbjct: 390 GLCREALFDEA---------YGCTPNAVTYEIIIRALFKNDKNK 424


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 198/394 (50%), Gaps = 1/394 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV S+  LI G  + G+++KA+E+  ++ E   SP+VV Y SLIDG CK  ++ +++ + 
Sbjct: 156 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 215

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G+     TY  LI G    G+ K+    +++M  +G+ P +   N  IH  C  
Sbjct: 216 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            ++ E   +FD M  +    N+++Y+TL+ G   E        L++ M   GI PN   +
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI+ +   G  DKA  +F  +++ G  P  VT+  +I +  + G    A      M +
Sbjct: 336 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 395

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYS-LMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            G+ PSE  Y  LI       ++ KA E+ S +M K    P V  +  +I+ L  +G + 
Sbjct: 396 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           E   + + M +T   PN V +N ++ GYC  GN   A  LL  M   G+ PN   Y + +
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              C++G+  +A  +   ML  G+KP+  LYNI+
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNII 549



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y S+ID   K++   ++     QM+D+G+RP + T+NSL+     +  + +    F E  
Sbjct: 195 YNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMS 254

Query: 167 ---------------------NRCKVELDVY-------------SFGILIKGCCEAGDLN 192
                                NR K   D++             S+  L+ G    G   
Sbjct: 255 SSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFA 314

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
               ++N +   G  PN   +  LI+   + G +++A ++F  +   G++    T+  +I
Sbjct: 315 NMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 374

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L + G   D    +  M   GV PS   Y CLI   CN G++ +  +L  EM ++++ 
Sbjct: 375 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIP 434

Query: 313 CNVVTY-NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
              V Y +++I  L KE RV E + ++D M   G  PNV+T+N L++G+C  G  ++AF 
Sbjct: 435 PPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 494

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L + + S G  P+   Y  L+  + K G    A  + R+M  +G+ P+ V Y I++    
Sbjct: 495 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLF 554

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++     A +M+  M +SG +  + TYGV++ GLC      EA+ L   ++   ++ + +
Sbjct: 555 QARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 614

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +N++I    K G    A  L   ++  GLVP + +Y+  I  L ++  + EA+ L   +
Sbjct: 615 TFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISV 674

Query: 552 LKLGLKPSVSLYNILYR 568
            K G  P   L N + R
Sbjct: 675 EKSGRAPDSRLLNHIVR 691



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 223/460 (48%), Gaps = 2/460 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
           Y  +ID + +    + AL  F ++L +G+ P   ++N+L+    K    DK + LF+   
Sbjct: 125 YNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMI 184

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              V  DV ++  LI G C+  ++ K+  VL Q+ + G  PN   Y SLI G    G  +
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWK 244

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            +  +F+++   GL+         I  L ++   K+  + ++ M L G  P++ +Y+ L+
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLL 304

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y  EG  +    L + M  + +  N   +N LI    +   + +A  + + M+  G+ 
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMI 364

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ +T+  +I   C  G  D A   FN +   G  PS   Y  LI+     G    A +L
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKEL 424

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + EM  + I P  V Y + +I++  +   + +  ++  LM ++G  P+V T+  L+ G C
Sbjct: 425 ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC 484

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
           + GNM+EA  L ++M    +EPN  +Y  ++ GYCK G    AL +  +M  KG+ P   
Sbjct: 485 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 544

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            Y+  +  L Q  +   A+ + ++M++ G   S+  Y ++
Sbjct: 545 LYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVV 584



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 178/361 (49%), Gaps = 1/361 (0%)

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
           +P +  Y  LID   +    E A  +F ++   GL     +Y  LI G  K G     +E
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
            + KM    VSP + TYN LI   C   ++ +  ++ ++M    +  N  TYN+LI G  
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
                +E+ R+  +M  +G+ P V+  N  I   C      +A  +F+ +   G  P+++
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           +Y+ L+  ++  G     + LV  M  +GI P+   + ILI+++ R   M+KA  ++  M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           Q  G  PD  T+  +I  LC  G + +A   FN M +  + P++ VY  +I G C  G  
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 507 YRALRLLGEMNEKGL-VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
            +A  L+ EM  K +  P +  +SS I  L ++G+  E + +++ M++ G +P+V  +N 
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 566 L 566
           L
Sbjct: 479 L 479



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGD 190
           M+  G+ P    FN L+    +    DK  L F + + K  + D  +F  +I   C  G 
Sbjct: 323 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY-T 249
           L+ A    N + ++G  P+  +Y  LI GCC +G++ +AK L  ++    +      Y +
Sbjct: 383 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            +I  LFK G   +G +  + M   G  P++ T+N L+  YC  G + E F L D M   
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            +  N   Y TL+ G CK  R+ +A  +   M   G+ P  + YN ++ G   A  T  A
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++F+++  +G + S+ TY V++    +   +  A+ L+ ++    +    +T+ I+I +
Sbjct: 563 KKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 622

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
            ++    ++A E+++ +   G  P V+TY ++I  L  + + +EA  LF S+ ++   P+
Sbjct: 623 MLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
             + N ++    K+    +A   L  ++E  L    ++ S    +  ++GK  E   LL
Sbjct: 683 SRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 200/416 (48%), Gaps = 8/416 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R +  +I+A+ +  + D+A+  F  M + G+ P + TF +++  + +    D    
Sbjct: 329 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 388

Query: 163 FFSENRCKVELDVYS----FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY-TSLI 217
            F+     V++ V      +  LI+GCC  G+L KA E+++++      P  V Y +S+I
Sbjct: 389 KFNH---MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 445

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +   K G +   K +   + + G      T+  L+ G    G  ++ F   + M   G+ 
Sbjct: 446 NNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 505

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+ Y Y  L+  YC  G++ +   +F +M H+ V    V YN ++ GL +  R   A+++
Sbjct: 506 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKM 565

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M  +G + ++ TY  ++ G C    TD+A  L  +L +      ++T+N++I A  K
Sbjct: 566 FHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLK 625

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A +L   +   G+ P+  TY ++I + ++ +  E+A  ++  ++KSG +PD   
Sbjct: 626 VGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRL 685

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
              ++  L  K  + +AS   + + E  L       +++   + +EG     ++LL
Sbjct: 686 LNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 109/226 (48%)

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           A  +P + TYN LID +      + A  +F +L   G  P V +YN LI  FSK G    
Sbjct: 116 AADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDK 175

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L  +M E+ ++P  VTY  LID   ++ +M K+  +   M  +G  P+  TY  LI+
Sbjct: 176 AYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 235

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G    G  KE+ ++F  M  + L P  V  N  I   C+      A  +   M  KG  P
Sbjct: 236 GYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP 295

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           NI SYS+ +     +G +     L+N M+  G+ P+   +NIL  A
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINA 341



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 433 SDDMEKAFEMYSLMQK------SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           SD    A E++  M +      +  +P +YTY +LI         + A  +F  +  T L
Sbjct: 94  SDGPALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGL 153

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+   YN +I G+ KEG   +A  L  +M E+ + P++ +Y+S I  LC+  +  ++E 
Sbjct: 154 GPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSER 213

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           +L QM+  G++P+   YN L
Sbjct: 214 VLEQMVDAGIRPNNKTYNSL 233


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 34/550 (6%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           PL    L+ WASR G QH  +  S+   L  + +       +  L+  +           
Sbjct: 89  PLLCVRLYVWASRFG-QHFARDRSVRRALGDALLRRGPVVLSAALVADV----------- 136

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
            RS  C +++             L  +++++  +  L+  A   F Q+   G+RP +  +
Sbjct: 137 -RSCGCEVSE------------ELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIY 183

Query: 145 NSLLIFVIKSCSFDKGWLFFSE---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           N+++   +++ + D  +L F +   + C+   D +++  L+ G C  G +++A  ++ Q+
Sbjct: 184 NAVIAASVRAGAVDAAYLRFQQMPADGCRP--DCFTYNTLVHGVCRRGIVDEALRLVKQM 241

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
           E  G  PNVV YT L+DG C    +E A  +  ++ E G+ AT+ TY  L+ G F+   +
Sbjct: 242 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEK 301

Query: 262 KDGFEFYEKMQLNGVSPSLYT--YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
           +  +    +   +   P+L++  Y+ L++         E  +L  +M  R       T++
Sbjct: 302 ERAYRMLSEWIES--DPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFS 359

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            +I    K +   +   L+D     G +     Y  +I  F    +  KA + F+Q+ S+
Sbjct: 360 IVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSD 419

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   SV +YN++I  F+KAG  + A + ++ M+E G +P+ VT+  LI+ +++  ++  A
Sbjct: 420 GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDA 479

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                ++ + G  PDV T+  LI GLC    + +A   F+ M E  + PN   YN++I G
Sbjct: 480 KAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHG 539

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
            C  G+  +A+ LL +M   G+ P+  S+++ I   C+  K  +A+ L N M + G+ P 
Sbjct: 540 LCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPD 599

Query: 560 VSLYNILYRA 569
              YN L +A
Sbjct: 600 SYTYNALIKA 609



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 6/276 (2%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKS---C-SFDKGWLFFSENRCKVELD-VYSFGILIKGC 185
           +++D  ++   N    + I +IKS   C    K   +FS+      L  V S+ I+I   
Sbjct: 376 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 435

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
            +AG++ +A E +  ++E GFSPN+V + +LI+G  K G++  AK   + + E GL+   
Sbjct: 436 AKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDV 495

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            T+T LI GL       D F  + +M   GV P++ TYN LIH  C+ G VS+  +L ++
Sbjct: 496 ITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNK 555

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M+   +  +  ++N  I   C+  ++++A++L + M   G+SP+  TYN LI   CD   
Sbjct: 556 MKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERR 615

Query: 366 TDKAFRLFNQLKS-NGQSPSVVTYNVLIRAFSKAGN 400
            D+A  +   ++S +       TY  ++ A +K G 
Sbjct: 616 VDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGR 651



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 150/322 (46%), Gaps = 17/322 (5%)

Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
           S+P   S  Y +++    K+ +  +A+    +M   G    S TF+ ++   +K      
Sbjct: 314 SDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVK------ 367

Query: 160 GWLFFSENRCKVELDVYSFG---------ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
             +  S + C++  D    G         ++IK      D++KA +  +Q+   G   +V
Sbjct: 368 --VLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSV 425

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             Y  +ID   K G++ERA    + + E G      T+  LI G  K G   D   F + 
Sbjct: 426 ESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKM 485

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           +  +G+ P + T+  LI   C+  ++ + F  F EM    V  NV TYN LI GLC    
Sbjct: 486 VMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGH 545

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           V +A  LL++MKM GI+P+  ++N  I  FC   + +KA +LFN +   G SP   TYN 
Sbjct: 546 VSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNA 605

Query: 391 LIRAFSKAGNSKMASDLVREME 412
           LI+A         A +++  ME
Sbjct: 606 LIKALCDERRVDEAKEIILAME 627



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 4/367 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++    +    ++A     + ++S     S  +++LL + +     DK  +  ++  
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLL-YCLSKNDMDKEAVELAKKM 346

Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            K    L   +F I+I    +  + +   E+++   + G +    +Y  +I    +  DI
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDI 406

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
            +A   F ++   GL+++  +Y ++I    K G  +   E  + MQ +G SP+L T+N L
Sbjct: 407 SKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTL 466

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ Y   G V +       +    +  +V+T+ +LI GLC   ++ +A     +M   G+
Sbjct: 467 INGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGV 526

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV TYN LI G C AG   KA  L N++K +G +P   ++N  I +F +    + A  
Sbjct: 527 RPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQK 586

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK-SGFSPDVYTYGVLIHGL 465
           L  +M   G++P   TY  LI +      +++A E+   M+  S      +TY  ++  L
Sbjct: 587 LFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGAL 646

Query: 466 CMKGNMK 472
              G  +
Sbjct: 647 TKMGRFR 653


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 166/317 (52%), Gaps = 2/317 (0%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +V+ Y+  I+G CK G I  A  +FR++ E G      TY +LI GL K+   + G    
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++MQ  G SP++ TY  LIH +C  G+V     + DEM HR +  N VTY  LI GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 329 MRVQEAERLLDQMKMAG--ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
             V+ A  +L +MK+ G    PNV+TY +LI G C  G  +      +++  +G  P+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  LI    + G+   A+ L+ EM   G     V Y  LID   +  +++ A EM  LM
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
            + G +PDV+TY  LI GLC  G + EA  L   M    + PN V Y  +I G+ +   +
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 507 YRALRLLGEMNEKGLVP 523
             AL+L+ EM   GL+P
Sbjct: 390 DHALQLVNEMKSNGLMP 406



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 168/325 (51%), Gaps = 2/325 (0%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           +Y+  I GL K G   +  E + +M+  G +P  +TYN LI+  C + ++  G  L DEM
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           + R  +  VVTY TLI G C   RV  A  +LD+M+  GI+PN +TY  LI G CD GE 
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 367 DKAFRLFNQLKSNGQS--PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
           ++A  +  ++K  G    P+VVTY  LI    + G  +M  + + EM   G  P+  TYT
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LI    +     +A  + + M   G   DV  Y  LI GLC  G +  A ++   M E 
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P+   Y  +I G C  G    AL L+ EM  KG+VPN  +Y++ I    Q  +   A
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHA 392

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRA 569
             L+N+M   GL P+  +Y IL+++
Sbjct: 393 LQLVNEMKSNGLMPAGDIYKILFKS 417



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 6/349 (1%)

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
           P SL  +  +L  S    V     Y   I+   K     +A+  F +M + G  P S T+
Sbjct: 73  PSSLRIYRPKLLNSQDTDVIS---YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTY 129

Query: 145 NSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
           N L+  + K    + G     E + +     V ++  LI G C AG ++ A ++L+++E 
Sbjct: 130 NILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEH 189

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG--LVATQHTYTVLICGLFKNGLQ 261
            G +PN V YT+LI G C  G++ERA ++ +++   G        TYT LI GL + GL 
Sbjct: 190 RGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLF 249

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           + G EF ++M ++G  P+  TY  LIH  C +G   E   L +EM       +VV YN+L
Sbjct: 250 EMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSL 309

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GLCK   +  A  +   M   G++P+V TY  LI G CDAG  D+A  L  ++++ G 
Sbjct: 310 IDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGI 369

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            P+ VTY  LI  F++A  +  A  LV EM+  G+ P+   Y IL  S 
Sbjct: 370 VPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 157/327 (48%), Gaps = 2/327 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           + DV S+   I G C+ G + +A E+  ++EE G +P+   Y  LI+G CK+  +E    
Sbjct: 88  DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++   G   T  TYT LI G    G      +  ++M+  G++P+  TY  LI   C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207

Query: 292 NEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
           + G+V     +  EM+ R   C  NVVTY  LI GLC++   +     LD+M ++G  PN
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
             TY  LI G C  G   +A  L N++ + G    VV YN LI    K G    A ++  
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
            M E+G+ P   TYT LI     +  +++A  +   M+  G  P+  TY  LI+G     
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMM 496
               A +L N M    L P   +Y ++
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 2/294 (0%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D +++ ILI G C+   L     ++++++  GFSP VV YT+LI G C  G ++ A  + 
Sbjct: 125 DSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDIL 184

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--VSPSLYTYNCLIHEYC 291
            ++   G+     TYT LI GL   G  +      ++M+L G    P++ TY  LIH  C
Sbjct: 185 DEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLC 244

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
            +G    G +  DEM       N  TY  LI GLC++    EA  LL++M   G   +V+
Sbjct: 245 QKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
            YN LIDG C  GE D A  +   +   G +P V TY  LI+    AG    A  L++EM
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +GI P+ VTYT LI+ F ++D  + A ++ + M+ +G  P    Y +L   L
Sbjct: 365 RAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 106/235 (45%), Gaps = 37/235 (15%)

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           + R++     N Q   V++Y+  I    K G    A ++ REMEE+G  P   TY ILI+
Sbjct: 75  SLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILIN 134

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
              +   +E    +   MQ  GFSP V TY  LIHG C  G +  A  + + M    + P
Sbjct: 135 GLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITP 194

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMN---------------------EKGL------ 521
           N V Y  +I G C  G   RA+ +L EM                      +KGL      
Sbjct: 195 NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGME 254

Query: 522 ----------VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
                      PN A+Y++ I  LCQ G + EA VLLN+M+ +G +  V +YN L
Sbjct: 255 FLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSL 309



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 36/184 (19%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y  +I    +  L +  + +  +M+ SG  P + T+ +L+  + +  SF +  +  +E  
Sbjct: 236 YTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMV 295

Query: 167 ----------------NRCK------------------VELDVYSFGILIKGCCEAGDLN 192
                             CK                  V  DV+++  LI+G C+AG L+
Sbjct: 296 AIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLD 355

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
           +A  ++ ++   G  PN V YT+LI+G  +    + A  L  ++   GL+     Y +L 
Sbjct: 356 EALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILF 415

Query: 253 CGLF 256
             L+
Sbjct: 416 KSLY 419


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 187/392 (47%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           +  +I G C+ GD+  A+ V  +L+  GF P +  + ++I+G CK GD   +  L  ++ 
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E GL  +      +I   +++G + D  E    +  N   P + TYN LI+  C EGK  
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
                 DE   + +  N ++Y  LI   CK      A +LL QM   G  P+++TY  LI
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
            G   +G  D A  +  +L   G SP    YN+L+    K G    A  L  EM +R I 
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P    Y  LID F+RS D ++A +++SL  + G   DV  +  +I G C  G + EA   
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            N M E  L P+   Y+ +I GY K+ +   A+++   M +    PN+ +Y+S I   C 
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602

Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            G +  AE    +M    L P+V  Y  L R+
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 192/424 (45%), Gaps = 20/424 (4%)

Query: 160 GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
           GW+    N CK   DV ++ ILI   C+ G    A   L++  + G  PN + Y  LI  
Sbjct: 334 GWII--ANDCKP--DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
            CK+ + + A  L  ++ E G      TY +LI GL  +G   D      K+   GVSP 
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
              YN L+   C  G+      LF EM  R +  +   Y TLI G  +     EA ++  
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
                G+  +V+ +N +I GFC +G  D+A    N++      P   TY+ +I  + K  
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
           +   A  + R ME+    P+ VTYT LI+ F    D + A E +  MQ     P+V TY 
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629

Query: 460 VLIHGLCMKGN-MKEASKLFNSMWETKLEPNDVVYNMMIFGYCK----------EGNSYR 508
            LI  L  + + +++A   +  M   K  PN+V +N ++ G+ K          +G+++ 
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHG 689

Query: 509 ALRLLGE----MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS-VSLY 563
              L  E    M   G   + A+Y+S +  LC  G    A +  ++M+K G  P  VS  
Sbjct: 690 QSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749

Query: 564 NILY 567
            IL+
Sbjct: 750 AILH 753



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 194/419 (46%), Gaps = 71/419 (16%)

Query: 187 EAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           E+G L+KA E+ + + E+  S P+V+   SL+    K+          R++G        
Sbjct: 146 ESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKS----------RRLG-------- 187

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
                            D  + Y++M   G S   Y+   L+   CNEGKV  G KL + 
Sbjct: 188 -----------------DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEG 230

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
              +    N+V YNT+I G CK   ++ A  +  ++K+ G  P + T+  +I+GFC  G+
Sbjct: 231 RWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD 290

Query: 366 TDKAFRLFNQLK-----------------------------------SNGQSPSVVTYNV 390
              + RL +++K                                   +N   P V TYN+
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI    K G  ++A   + E  ++G+ P+ ++Y  LI ++ +S + + A ++   M + G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
             PD+ TYG+LIHGL + G+M +A  +   + +  + P+  +YNM++ G CK G    A 
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            L  EM ++ ++P+   Y++ I    + G + EA  + +  ++ G+K  V  +N + + 
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 199/432 (46%), Gaps = 21/432 (4%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFFS 165
           Y  +I+   K    + A+ +  +    G+ P + ++  L+    KS  +D   K  L  +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
           E  CK   D+ ++GILI G   +G ++ A  +  +L + G SP+  IY  L+ G CK G 
Sbjct: 408 ERGCKP--DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
              AK+LF ++ +  ++   + Y  LI G  ++G   +  + +      GV   +  +N 
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           +I  +C  G + E     + M    +  +  TY+T+I G  K+  +  A ++   M+   
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PNV+TY  LI+GFC  G+   A   F +++     P+VVTY  LIR+ +K  ++   +
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 406 DLVRE-MEERGITPSEVTYTILIDSFVR------------SDDMEKAF--EMYSLMQKSG 450
               E M      P+EVT+  L+  FV+            S+  + +   E +  M+  G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           +S     Y   +  LC+ G +K A    + M +    P+ V +  ++ G+C  GNS +  
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 511 RL-LGEMNEKGL 521
            +    + EKGL
Sbjct: 766 NMDFCNLGEKGL 777



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 67/381 (17%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           A   F +MLD  + P +  + +L+   I+S  FD+    FS +  K V++DV     +IK
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           G C +G L++A   +N++ E    P+   Y+++IDG  K  D+  A  +FR         
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR--------- 579

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                                      M+ N   P++ TY  LI+ +C +G      + F
Sbjct: 580 --------------------------YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMR-VQEAERLLDQMKMAGISPNVITYNKLIDGFC- 361
            EM+ R++  NVVTY TLI  L KE   +++A    + M      PN +T+N L+ GF  
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673

Query: 362 -------------DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
                        + G++      F+++KS+G S     YN  +      G  K A    
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733

Query: 409 REMEERGITPSEVTYTILIDSFV--------RSDDM----EKAFEM---YS-LMQKSGFS 452
            +M ++G +P  V++  ++  F         R+ D     EK  E+   YS ++++    
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQ 793

Query: 453 PDVYTYGVLIHGLCMKGNMKE 473
           P +     ++H +  K + KE
Sbjct: 794 PVICEASTILHAMVEKADTKE 814



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 22/311 (7%)

Query: 73  IISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQM 132
           ++SG   +  F P  LL   +++     N +  + +Y ++ID  ++S   D+A   F   
Sbjct: 456 LMSGLCKTGRFLPAKLL--FSEML--DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDL 191
           ++ GV+      N+++    +S   D+     +  N   +  D +++  +I G  +  D+
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
             A ++   +E+    PNVV YTSLI+G C  GD + A+  F+++    LV    TYT L
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631

Query: 252 ICGLFKNG--LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC--------------NEGK 295
           I  L K    L+K  + ++E M  N   P+  T+NCL+  +               N G+
Sbjct: 632 IRSLAKESSTLEKAVY-YWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
            S   + F  M+    + +   YN+ +  LC    V+ A    D+M   G SP+ +++  
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750

Query: 356 LIDGFCDAGET 366
           ++ GFC  G +
Sbjct: 751 ILHGFCVVGNS 761



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 370 FRLFNQLKS---NGQSPSV-VTYNVL---IRAFSKAGNSKMAS---DLVREMEERGITPS 419
           +R+FN+++    N ++ +V +T+  L   + A++++G+   A    D V E+ +    P 
Sbjct: 112 YRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPD 169

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            +    L+   V+S  +  A ++Y  M   G S D Y+  +L+ G+C +G ++   KL  
Sbjct: 170 VIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE 229

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
             W     PN V YN +I GYCK G+   A  +  E+  KG +P + ++ + I   C++G
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            +  ++ LL+++ + GL+ SV   N +  AK
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 239/471 (50%), Gaps = 22/471 (4%)

Query: 103 VTKSRLYESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-G 160
           V  SRL+ S+I   ++   + DQ    + +M+  GV P     N L+       SF K G
Sbjct: 92  VPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI------HSFCKVG 145

Query: 161 WLFFS----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            L F+     NR  + +D  ++  +I G CE G  ++A++ L+++ +MG  P+ V Y +L
Sbjct: 146 RLSFAISLLRNRV-ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 204

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK-NGLQKDGFEFYEKMQLNG 275
           IDG CK G+  RAK L  +I EL L+    T+T+L+   +  + ++    E Y  M ++G
Sbjct: 205 IDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIE----EAYRDMVMSG 256

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P + T++ +I+  C  GKV EG  L  EM    V  N VTY TL+  L K    + A 
Sbjct: 257 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 316

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            L  QM + GI  +++ Y  L+DG   AG+  +A + F  L  + Q P+VVTY  L+   
Sbjct: 317 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 376

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            KAG+   A  ++ +M E+ + P+ VTY+ +I+ +V+   +E+A  +   M+     P+ 
Sbjct: 377 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 436

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +TYG +I GL   G  + A +L   M    +E N+ + + ++    + G       L+ +
Sbjct: 437 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 496

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  KG+  +  +Y+S I V  + G    A     +M + G+   V  YN+L
Sbjct: 497 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 547



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 238/487 (48%), Gaps = 30/487 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I    +  L+D+A  +  +M+  G+ P + ++N+L+    K  +F +      E  
Sbjct: 166 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 225

Query: 167 ---------------NRCKVE------------LDVYSFGILIKGCCEAGDLNKAFEVLN 199
                          N   +E             DV +F  +I   C+ G + +   +L 
Sbjct: 226 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 285

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++EEM   PN V YT+L+D   K      A  L+ ++   G+      YTVL+ GLFK G
Sbjct: 286 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 345

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             ++  + ++ +  +   P++ TY  L+   C  G +S    +  +M  + V  NVVTY+
Sbjct: 346 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 405

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           ++I G  K+  ++EA  LL +M+   + PN  TY  +IDG   AG+ + A  L  +++  
Sbjct: 406 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 465

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   +    + L+    + G  K    LV++M  +G+T  ++ YT LID F +  D E A
Sbjct: 466 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 525

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                 MQ+ G   DV +Y VLI G+   G +  A   +  M E  +EP+   +N+M+  
Sbjct: 526 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNS 584

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K+G+S   L+L  +M   G+ P++ S +  +G+LC++GK  EA  +LNQM+ + + P+
Sbjct: 585 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 644

Query: 560 VSLYNIL 566
           ++ Y I 
Sbjct: 645 LTTYRIF 651



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 13/491 (2%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +G ++S+ F        +TQ+   S  P   +  Y S+I+ ++K  + ++A+    +M D
Sbjct: 379 AGDLSSAEFI-------ITQMLEKSVIPNVVT--YSSMINGYVKKGMLEEAVSLLRKMED 429

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNK 193
             V P   T+ +++  + K+   +       E R   VE + Y    L+      G + +
Sbjct: 430 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 489

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
              ++  +   G + + + YTSLID   K GD E A     ++ E G+     +Y VLI 
Sbjct: 490 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 549

Query: 254 GLFKNGLQKDGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           G+ K G  K G ++ Y+ M+  G+ P + T+N +++    +G      KL+D+M+   + 
Sbjct: 550 GMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 607

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++++ N ++  LC+  +++EA  +L+QM +  I PN+ TY   +D        D  F+ 
Sbjct: 608 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 667

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              L S G   S   YN LI    K G +K A+ ++ +ME RG  P  VT+  L+  +  
Sbjct: 668 HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 727

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + KA   YS+M ++G SP+V TY  +I GL   G +KE  K  + M    + P+D  
Sbjct: 728 GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 787

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G  K GN   ++ +  EM   GLVP  ++Y+  I      GK  +A  LL +M 
Sbjct: 788 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMG 847

Query: 553 KLGLKPSVSLY 563
           K G+ P+ S Y
Sbjct: 848 KRGVSPNTSTY 858



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 237/506 (46%), Gaps = 47/506 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D+  K+ +   AL  + QM+  G+       + ++  V+    F  G L  +E  
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGI-----PVDLVVYTVLMDGLFKAGDLREAEKT 353

Query: 169 CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            K+ L+      V ++  L+ G C+AGDL+ A  ++ Q+ E    PNVV Y+S+I+G  K
Sbjct: 354 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 413

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E A  L RK+ +  +V    TY  +I GLFK G ++   E  ++M+L GV  + Y 
Sbjct: 414 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 473

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM-----------------------------------R 307
            + L++     G++ E   L  +M                                   +
Sbjct: 474 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 533

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R +  +VV+YN LI G+ K  +V  A+     M+  GI P++ T+N +++     G+++
Sbjct: 534 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 592

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
              +L++++KS G  PS+++ N+++    + G  + A  ++ +M    I P+  TY I +
Sbjct: 593 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 652

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +    +  F+ +  +   G       Y  LI  LC  G  K+A+ +   M      
Sbjct: 653 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V +N ++ GY    +  +AL     M E G+ PN+A+Y++ I  L   G   E +  
Sbjct: 713 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 772

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNNI 573
           L++M   G++P    YN L   +  I
Sbjct: 773 LSEMKSRGMRPDDFTYNALISGQAKI 798



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 191/425 (44%), Gaps = 15/425 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K    + AL +  +M + G+     ++N L+  ++K       W +     
Sbjct: 509 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE 568

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +E D+ +F I++    + GD     ++ ++++  G  P+++    ++   C+NG +E 
Sbjct: 569 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 628

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +  ++  + +     TY + +    K+      F+ +E +   G+  S   YN LI 
Sbjct: 629 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 688

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G   +   +  +M  R    + VT+N+L+ G      V++A      M  AGISP
Sbjct: 689 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 748

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TYN +I G  DAG   +  +  +++KS G  P   TYN LI   +K GN K +  + 
Sbjct: 749 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 808

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC-- 466
            EM   G+ P   TY +LI  F     M +A E+   M K G SP+  TY  +I GLC  
Sbjct: 809 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 868

Query: 467 -----MKGNMK-----EASKLFNSMWETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
                ++ N K     EA  L   M E K  +  N  +Y  +   + K G    A R L 
Sbjct: 869 CTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIY-WISAAFSKPGMKVDAERFLK 927

Query: 515 EMNEK 519
           E  +K
Sbjct: 928 ECYKK 932



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 415 GITPSEVTYTILIDSF-VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           G+ P    +  LI  F V     ++   +YS M   G SPDV+   VLIH  C  G +  
Sbjct: 90  GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 149

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  L  +     +  + V YN +I G C+ G +  A + L EM + G++P+  SY++ I 
Sbjct: 150 AISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 206

Query: 534 VLCQDGKWPEAEVLLNQMLKLGL 556
             C+ G +  A+ L++++ +L L
Sbjct: 207 GFCKVGNFVRAKALVDEISELNL 229


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 239/471 (50%), Gaps = 22/471 (4%)

Query: 103 VTKSRLYESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK-G 160
           V  SRL+ S+I   ++   + DQ    + +M+  GV P     N L+       SF K G
Sbjct: 90  VPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI------HSFCKVG 143

Query: 161 WLFFS----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            L F+     NR  + +D  ++  +I G CE G  ++A++ L+++ +MG  P+ V Y +L
Sbjct: 144 RLSFAISLLRNRV-ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 202

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK-NGLQKDGFEFYEKMQLNG 275
           IDG CK G+  RAK L  +I EL L+    T+T+L+   +  + ++    E Y  M ++G
Sbjct: 203 IDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIE----EAYRDMVMSG 254

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P + T++ +I+  C  GKV EG  L  EM    V  N VTY TL+  L K    + A 
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
            L  QM + GI  +++ Y  L+DG   AG+  +A + F  L  + Q P+VVTY  L+   
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            KAG+   A  ++ +M E+ + P+ VTY+ +I+ +V+   +E+A  +   M+     P+ 
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
           +TYG +I GL   G  + A +L   M    +E N+ + + ++    + G       L+ +
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  KG+  +  +Y+S I V  + G    A     +M + G+   V  YN+L
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 238/487 (48%), Gaps = 30/487 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I    +  L+D+A  +  +M+  G+ P + ++N+L+    K  +F +      E  
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223

Query: 167 ---------------NRCKVE------------LDVYSFGILIKGCCEAGDLNKAFEVLN 199
                          N   +E             DV +F  +I   C+ G + +   +L 
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++EEM   PN V YT+L+D   K      A  L+ ++   G+      YTVL+ GLFK G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
             ++  + ++ +  +   P++ TY  L+   C  G +S    +  +M  + V  NVVTY+
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           ++I G  K+  ++EA  LL +M+   + PN  TY  +IDG   AG+ + A  L  +++  
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G   +    + L+    + G  K    LV++M  +G+T  ++ YT LID F +  D E A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
                 MQ+ G   DV +Y VLI G+   G +  A   +  M E  +EP+   +N+M+  
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNS 582

Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
             K+G+S   L+L  +M   G+ P++ S +  +G+LC++GK  EA  +LNQM+ + + P+
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642

Query: 560 VSLYNIL 566
           ++ Y I 
Sbjct: 643 LTTYRIF 649



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 13/491 (2%)

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
           +G ++S+ F        +TQ+   S  P   +  Y S+I+ ++K  + ++A+    +M D
Sbjct: 377 AGDLSSAEFI-------ITQMLEKSVIPNVVT--YSSMINGYVKKGMLEEAVSLLRKMED 427

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNK 193
             V P   T+ +++  + K+   +       E R   VE + Y    L+      G + +
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
              ++  +   G + + + YTSLID   K GD E A     ++ E G+     +Y VLI 
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547

Query: 254 GLFKNGLQKDGFEF-YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
           G+ K G  K G ++ Y+ M+  G+ P + T+N +++    +G      KL+D+M+   + 
Sbjct: 548 GMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            ++++ N ++  LC+  +++EA  +L+QM +  I PN+ TY   +D        D  F+ 
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
              L S G   S   YN LI    K G +K A+ ++ +ME RG  P  VT+  L+  +  
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
              + KA   YS+M ++G SP+V TY  +I GL   G +KE  K  + M    + P+D  
Sbjct: 726 GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 785

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           YN +I G  K GN   ++ +  EM   GLVP  ++Y+  I      GK  +A  LL +M 
Sbjct: 786 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMG 845

Query: 553 KLGLKPSVSLY 563
           K G+ P+ S Y
Sbjct: 846 KRGVSPNTSTY 856



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 237/506 (46%), Gaps = 47/506 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y +++D+  K+ +   AL  + QM+  G+       + ++  V+    F  G L  +E  
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGI-----PVDLVVYTVLMDGLFKAGDLREAEKT 351

Query: 169 CKVELD------VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
            K+ L+      V ++  L+ G C+AGDL+ A  ++ Q+ E    PNVV Y+S+I+G  K
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E A  L RK+ +  +V    TY  +I GLFK G ++   E  ++M+L GV  + Y 
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM-----------------------------------R 307
            + L++     G++ E   L  +M                                   +
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
            R +  +VV+YN LI G+ K  +V  A+     M+  GI P++ T+N +++     G+++
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
              +L++++KS G  PS+++ N+++    + G  + A  ++ +M    I P+  TY I +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +    +  F+ +  +   G       Y  LI  LC  G  K+A+ +   M      
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           P+ V +N ++ GY    +  +AL     M E G+ PN+A+Y++ I  L   G   E +  
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNNI 573
           L++M   G++P    YN L   +  I
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKI 796



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 191/425 (44%), Gaps = 15/425 (3%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID   K    + AL +  +M + G+     ++N L+  ++K       W +     
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE 566

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +E D+ +F I++    + GD     ++ ++++  G  P+++    ++   C+NG +E 
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A  +  ++  + +     TY + +    K+      F+ +E +   G+  S   YN LI 
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G   +   +  +M  R    + VT+N+L+ G      V++A      M  AGISP
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TYN +I G  DAG   +  +  +++KS G  P   TYN LI   +K GN K +  + 
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC-- 466
            EM   G+ P   TY +LI  F     M +A E+   M K G SP+  TY  +I GLC  
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866

Query: 467 -----MKGNMK-----EASKLFNSMWETK--LEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
                ++ N K     EA  L   M E K  +  N  +Y  +   + K G    A R L 
Sbjct: 867 CTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIY-WISAAFSKPGMKVDAERFLK 925

Query: 515 EMNEK 519
           E  +K
Sbjct: 926 ECYKK 930



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 415 GITPSEVTYTILIDSF-VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           G+ P    +  LI  F V     ++   +YS M   G SPDV+   VLIH  C  G +  
Sbjct: 88  GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
           A  L  +     +  + V YN +I G C+ G +  A + L EM + G++P+  SY++ I 
Sbjct: 148 AISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204

Query: 534 VLCQDGKWPEAEVLLNQMLKLGL 556
             C+ G +  A+ L++++ +L L
Sbjct: 205 GFCKVGNFVRAKALVDEISELNL 227


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 220/430 (51%), Gaps = 2/430 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIK 183
           A+     M  +G+ P  +  N+ +  ++     DK   F    +  ++E +V ++  LIK
Sbjct: 188 AMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIK 247

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLV 242
           G C+   L  A E++ ++   G SP+ + Y +++   CK   I+  ++L  K + +  L+
Sbjct: 248 GYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLL 307

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
             Q TY   +  L K+G   +  EF  + +          Y+ ++H +C EG++ +  ++
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
            +EM  +    +VVTY ++I GLC+E +V +A+++L QM   G  PN ++Y  L++G C 
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G + +A  + N  + +   P+ +TY+VL+  F + G S  A DLVREM ++G  P+ V 
Sbjct: 428 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 487

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
             +LI S  + + +++A         +G + +V  +  +IHG C K +++ A  L + M+
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
            +   P+ V Y  +I    K+G    A +L  +M   GL+P   +Y + I   C+ G+  
Sbjct: 548 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 607

Query: 543 EAEVLLNQML 552
           +   LL +ML
Sbjct: 608 DLLKLLEKML 617



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 218/448 (48%), Gaps = 6/448 (1%)

Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVY 176
           + R+ +  L     + DS + P   T+N+ +  + K    D+   F  E    +  +D  
Sbjct: 287 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
            +  ++   C  G ++KA E++N++   G  P+VV YTS+I+G C+   +++AK + R++
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            + G      +YT L+ GL KNG   +  E     + +   P+  TY+ L+H +  EGK 
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
           SE   L  EM  +      V  N LI  LC+E +V EA+R ++Q    G + NV+ +  +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I GFC   + + A  L + +  + + P VVTY  +I A  K G  + A+ L  +M   G+
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 586

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT-YGVLIHGLCMKGNMKEAS 475
            P+ VTY  +I  + R   M +  ++  L++K     +  T Y  +I  LC  GN+++A 
Sbjct: 587 IPTPVTYRTVIHQYCR---MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAY 643

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           KL   +  T  + +    +M+I  Y  +G    +  +   M  + L+P++         L
Sbjct: 644 KLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKL 703

Query: 536 CQDGKWPEAEVLLNQMLKLG-LKPSVSL 562
             +GK  EA+ L+ + ++ G + P   L
Sbjct: 704 MLEGKSEEADKLILRFVERGRISPQCQL 731



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           +  + ++Y ++++   K    + AK + R + +  +      +  ++    + G  ++  
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
                MQ  G+ P L   N  IH      ++ +  +  + M+  E+  NV+TYN LI G 
Sbjct: 190 RVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGY 249

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ--LKSNGQSP 383
           C   R+++A  L+ +M   G SP+ I+Y  ++   C      K  RL  +  LK +   P
Sbjct: 250 CDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI-KEVRLLMEKMLKDSNLLP 308

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             VTYN  +   SK G+   A + +RE EER     +V Y+ ++ SF R   M+KA E+ 
Sbjct: 309 DQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIV 368

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
           + M   G  PDV TY  +I+GLC +  + +A K+   M++   +PN V Y  ++ G CK 
Sbjct: 369 NEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKN 428

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           GNS  A  ++    E   +PN  +YS  +    ++GK  EA  L+ +M+K G  P+    
Sbjct: 429 GNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEI 488

Query: 564 NILYRA 569
           N+L ++
Sbjct: 489 NLLIQS 494



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 188/436 (43%), Gaps = 71/436 (16%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++E    +FG ++     AG L  A  VL  +++ G  P++ I  + I            
Sbjct: 164 RIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIH----------- 212

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
                               VL+ G   N L K    F E+MQ+  + P++ TYNCLI  
Sbjct: 213 --------------------VLVMG---NRLDK-AVRFLERMQIVEIEPNVITYNCLIKG 248

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISP 348
           YC+  ++ +  +L  EM  +  + + ++Y T++  LCKE R++E   L+++M K + + P
Sbjct: 249 YCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLP 308

Query: 349 NVITYN-----------------------------------KLIDGFCDAGETDKAFRLF 373
           + +TYN                                    ++  FC  G  DKA  + 
Sbjct: 309 DQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIV 368

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           N++ S G  P VVTY  +I    +      A  ++R+M + G  P+ V+YT L++   ++
Sbjct: 369 NEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKN 428

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +  +A EM ++ ++  + P+  TY VL+HG   +G   EA  L   M +    P  V  
Sbjct: 429 GNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEI 488

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I   C+E     A R + +    G   N+ ++++ I   CQ      A  LL+ M  
Sbjct: 489 NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 548

Query: 554 LGLKPSVSLYNILYRA 569
               P V  Y  +  A
Sbjct: 549 SNKHPDVVTYTTIIDA 564



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 90/214 (42%), Gaps = 7/214 (3%)

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           +++ F       +  R F   +   + P V     LI   S A N K+  +L   +  R 
Sbjct: 42  VLNSFTGGYRQTEGIRRFEGGEDESRHPLVREICRLIELRS-AWNPKLEGELRHLL--RS 98

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           + P +V   + +    ++D+       Y   ++  +  D   Y  ++  L      + A 
Sbjct: 99  LKPRQVCAVLQL----QTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAK 154

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           ++   M + ++E     +  ++  Y + G    A+R+L  M + G+ P+++  ++ I VL
Sbjct: 155 RVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVL 214

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               +  +A   L +M  + ++P+V  YN L + 
Sbjct: 215 VMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKG 248


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 232/511 (45%), Gaps = 53/511 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS-----NTFNSLL------IFVIKSCSF 157
           Y ++ID + ++R  D+AL    +M  +GV P           S+L        V  S   
Sbjct: 365 YTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALI 424

Query: 158 DKGWLFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV 211
           ++G +  +E+      R K+  D  SF  +I   C  G++ +AF V + +   G SPNV 
Sbjct: 425 NEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVC 484

Query: 212 IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM 271
            Y +L+ G C+ G + +AK     + ++     + T+  L+ G+ K G   +  +  EKM
Sbjct: 485 TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKM 544

Query: 272 QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRV 331
             N   P ++TY  L+  +C +GK+     +   M  + V  + V Y  L+ GL  E +V
Sbjct: 545 VKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQV 604

Query: 332 QEA------------------------------------ERLLDQMKMAGISPNVITYNK 355
           + A                                    +R++  M  + + PN  +YN 
Sbjct: 605 KAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNI 664

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+ G+   G+  K+  L+  +   G  P  VTY +LI   S+ G   +A   + +M   G
Sbjct: 665 LMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG 724

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I P  + + ILI +F     M  A ++++ M+    SP   TY  +I+GL  K  + ++ 
Sbjct: 725 IFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSH 784

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           ++   M +  L+PN   Y  ++   C+ G   RA RL  EM   G+VP   + SS I  L
Sbjct: 785 EVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGL 844

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ GK  EA ++ + M++ G+ P+V+ +  L
Sbjct: 845 CKCGKLEEAVIVFSTMMRSGMVPTVATFTTL 875



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 217/474 (45%), Gaps = 41/474 (8%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---FSENRCKVELDVYSFGI 180
           QA  +   +LD        TFN+LL+ + K  + D+         +N C    D++++ I
Sbjct: 501 QAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLP--DIHTYTI 558

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GEL 239
           L+ G C  G +  A  +L  + + G  P+ V YT L++G    G ++ A  +F++I  + 
Sbjct: 559 LLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           GL A    Y  L+ G  K G           M  + V P+  +YN L+H Y   G+ S+ 
Sbjct: 619 GLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKS 678

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             L+  M  + +  + VTY  LI GL +   +  A + L++M + GI P+ + ++ LI  
Sbjct: 679 LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 738

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
           F +  +   A +LFN +K    SPS  TY+ +I    +      + +++REM + G+ P+
Sbjct: 739 FSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPN 798

Query: 420 EVTYTILIDSFVRSDDMEKAFEM-----------------------------------YS 444
              Y  L+++  R   +++AF +                                   +S
Sbjct: 799 HTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFS 858

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M +SG  P V T+  L+H LC +  + +A  L   M   +L+ + V YN++I G CK+ 
Sbjct: 859 TMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDK 918

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
               AL L  EM  KGL PN+ +Y +  G +   G     E LL  + + GL P
Sbjct: 919 RISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 238/511 (46%), Gaps = 30/511 (5%)

Query: 58  MSSHSHAAAQTLILKI-ISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAH 116
           + +  H+ A +++ ++ + G   ++ FT    L  +   F S+++ V     +E ++ A+
Sbjct: 112 IQAQMHSQAMSVLRRLAVMGFSCTAIFTS---LLRIISRFDSTNHVV-----FELLVKAY 163

Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDV 175
           +K R    A      M D G +      N++L  +++       WLF  E+      LDV
Sbjct: 164 VKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDV 223

Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
            +  IL+   C  G+  KA ++L +++    S N V Y +++    K G  + A  +   
Sbjct: 224 TTCNILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKKGRFKAALCVLED 282

Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
           +    + A  +TY ++I  L +       F   ++M+ + + P   TYN LI+ +  EGK
Sbjct: 283 MERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGK 342

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           ++    +F+ M  +    +V TY T+I G C+  R+ +A  +L +M++ G+ P+      
Sbjct: 343 INHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPS------ 396

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
                    E  KA ++   +  +G  P +VTY+ LI      G    A    + M    
Sbjct: 397 ---------EISKAKQILKSMLEDGIDPDIVTYSALI----NEGMITEAEHFRQYMSRMK 443

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
           I+   V++  +IDS+    ++ +AF +Y  M + G SP+V TY  L+ GLC  G++ +A 
Sbjct: 444 ISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 503

Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
           +    + +     ++  +N ++ G CK G    AL L  +M +   +P+I +Y+  +   
Sbjct: 504 QFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGF 563

Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           C+ GK   A ++L  ML  G+ P    Y  L
Sbjct: 564 CRKGKILPALIMLQMMLDKGVVPDTVAYTCL 594



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 199/448 (44%), Gaps = 26/448 (5%)

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           S T+N++L + +K   F        +  R  +  D+Y++ I+I   C      +AF +L 
Sbjct: 257 SVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLK 316

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ +    P+   Y +LI+G    G I  A  +F  +     V +  TYT +I G  +N 
Sbjct: 317 RMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNR 376

Query: 260 LQKDGFEFYEKMQLNGVSPS--------------------LYTYNCLIHEYCNEGKVSEG 299
                     +MQ+ GV PS                    + TY+ LI    NEG ++E 
Sbjct: 377 RIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALI----NEGMITEA 432

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
                 M   +++ + V++N +I   C    + EA  + D M   G SPNV TY  L+ G
Sbjct: 433 EHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRG 492

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C  G   +A +    L     +    T+N L+    K G    A DL  +M +    P 
Sbjct: 493 LCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPD 552

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
             TYTIL+  F R   +  A  M  +M   G  PD   Y  L++GL  +G +K AS +F 
Sbjct: 553 IHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQ 612

Query: 480 S-MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
             + +  L  + + YN ++ GY K GN     R++ +M +  + PN ASY+  +    + 
Sbjct: 613 EIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKG 672

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G++ ++  L   M++ G++P    Y +L
Sbjct: 673 GQFSKSLYLYKYMVRKGIRPDNVTYRLL 700



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 2/298 (0%)

Query: 121  LSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFG 179
            L D A+ +  +M+  G+ P    F+ L+  F  KS   +   LF      ++     ++ 
Sbjct: 709  LIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYS 768

Query: 180  ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
             +I G      L+++ EVL ++ ++G  PN   Y +L++  C+ G I+RA  L  ++  L
Sbjct: 769  AMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKAL 828

Query: 240  GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
            G+V      + +I GL K G  ++    +  M  +G+ P++ T+  L+H  C E K+++ 
Sbjct: 829  GIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADA 888

Query: 300  FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
              L   M    +  +VV+YN LI GLCK+ R+ +A  L ++MK  G+ PNV TY  L   
Sbjct: 889  LHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGA 948

Query: 360  FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS-KMASDLVREMEERGI 416
                G       L   ++  G  P  V    L R    A     M  +  +E+  RG+
Sbjct: 949  MYSTGIMQNGEELLEDIEERGLIPVYVQLENLERQMEDAIRRLNMIRNCRKEVPFRGV 1006


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 236/506 (46%), Gaps = 40/506 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   KS   ++AL +  +M+++ V P   T+  L+  ++K   FD+      E  
Sbjct: 279 YNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMY 338

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K    + + F  LI G    G+++ A  V + +   G  PN V + +L+ G C+   +E
Sbjct: 339 SKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQME 398

Query: 228 RAKMLFRKI--------------------------GELGLV---------ATQHTYTVLI 252
           +A+ +   +                            L +V               T+L+
Sbjct: 399 QAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLV 458

Query: 253 CGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           CGL K G   +  + + ++    G++ +  T N L++  C  G + E F +  EM  R +
Sbjct: 459 CGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGL 518

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             + ++YNTLI G CK  +++EA +L ++M   G  P+  TYN L+ G  D G+ D   R
Sbjct: 519 VLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGR 578

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + ++ K +G  P++ TY +++  +  A     A  L  ++    +  S V Y ILI +  
Sbjct: 579 VLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHS 638

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++ +  +AF++   M+ S   P ++TY  +IHG+C    ++EA  +F  M    L PN  
Sbjct: 639 KAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVF 698

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            Y  +I GYCK G   +   +L EM    + PN  +Y+  I   C+ G   EA  LLN+M
Sbjct: 699 CYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEM 758

Query: 552 LKLGLKPSVSLYNIL---YRAKNNIE 574
           +  G+ P    Y +L   Y  +N +E
Sbjct: 759 IANGISPDTVTYTVLQKGYCKENELE 784



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 216/441 (48%), Gaps = 6/441 (1%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           ++ ++ID + +    D AL     M   G++P + T N+LL    ++   ++      + 
Sbjct: 348 VFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYL 407

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             N   V  D  S+  ++   C++   + A +++  L       N  + T L+ G CK G
Sbjct: 408 LSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCG 465

Query: 225 D-IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +E   + FR   + GL A   T   L+ GL + G  ++ F   ++M   G+     +Y
Sbjct: 466 KHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISY 525

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI   C  GK+ E FKL ++M  +    +  TYN L+ GL  + ++ +  R+L + K 
Sbjct: 526 NTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ PN+ TY  +++G+C+A   D A  LFN+L  N    S V YN+LI A SKAGN   
Sbjct: 586 HGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTE 645

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L   M    I P+  TY+ +I     +D +E+A  ++  M+  G  P+V+ Y  LI 
Sbjct: 646 AFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIG 705

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           G C  G M +   +   M    ++PN + Y +MI GYCK GN+  A +LL EM   G+ P
Sbjct: 706 GYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISP 765

Query: 524 NIASYSSTIGVLCQDGKWPEA 544
           +  +Y+      C++ +  E 
Sbjct: 766 DTVTYTVLQKGYCKENELEET 786



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 24/507 (4%)

Query: 83  FTPRSLLCHLTQLFPSSSNPVTK---SRLYESIIDAHLK---SRLSDQALFYFHQMLDSG 136
           FT RS    +  L  S+  P  K    RL E   +  LK   +RLS+ A       L+ G
Sbjct: 109 FTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLSEIA----SAFLELG 164

Query: 137 VRPRSNTFNSLLIFVIKS--------CSFDKGWLFFSENRCKVELDVYSFGILIKGCCEA 188
            R        LLI+++ S         +FD   LF S+    V   + S   L+    ++
Sbjct: 165 ERSHGEL--DLLIYILCSQFQHLGFHWAFDTFMLFTSKG---VFPSLKSCNFLMSSLVKS 219

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
            +L+K+F V + +   G   +V  Y + I+  CK G I+ A  LF K+GE G++    TY
Sbjct: 220 NELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTY 279

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI GL K+G  ++   F  +M  N V+PSL TY  L++      K  E   +  EM  
Sbjct: 280 NNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYS 339

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           +  + N   +N LI G  ++  + +A R+ D M + G+ PN +T+N L+ GFC   + ++
Sbjct: 340 KGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQ 399

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A ++   L SN  S +    + ++    K+     A  +V+ +  R I  ++   T+L+ 
Sbjct: 400 AEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVC 459

Query: 429 SFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
              +     +A ++ + L  K G + +  T   L++GLC +GNM+E   +   M E  L 
Sbjct: 460 GLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLV 519

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            + + YN +IFG CK G    A +L  +M ++G  P+  +Y+  +  L   GK  +   +
Sbjct: 520 LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRV 579

Query: 548 LNQMLKLGLKPSVSLYNILYRAKNNIE 574
           L++    G+ P++  Y ++     N +
Sbjct: 580 LHEAKDHGVVPNIYTYALMLEGYCNAD 606



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 145/269 (53%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD  S+  LI GCC++G + +AF++  ++ + GF P+   Y  L+ G    G ++    +
Sbjct: 520 LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRV 579

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
             +  + G+V   +TY +++ G        +    + K+  N V  S   YN LI  +  
Sbjct: 580 LHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSK 639

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
            G  +E FKL D MR   +   + TY+++I G+C    V+EA+ + ++M+  G+ PNV  
Sbjct: 640 AGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFC 699

Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
           Y  LI G+C  G+ D+   +  ++ SN   P+ +TY ++I  + K GN+K A+ L+ EM 
Sbjct: 700 YTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMI 759

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFE 441
             GI+P  VTYT+L   + + +++E+  +
Sbjct: 760 ANGISPDTVTYTVLQKGYCKENELEETLQ 788


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 236/468 (50%), Gaps = 1/468 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y S+I A+   R  ++AL    +M + G+     T++ ++    K  + +    +F 
Sbjct: 329 SHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFK 388

Query: 166 ENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           + + +   L+ Y +G +I   C+A ++++A  ++ ++EE G    + IY +++DG     
Sbjct: 389 KAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIR 448

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           + E+  ++F+++ E G   +  TY  LI    K G      E  + M+  G+  ++ TY+
Sbjct: 449 NEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYS 508

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI+ +      +  F +F+++    +  +VV YN +I   C    +  A  ++ +M+  
Sbjct: 509 MLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKE 568

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P   T+  +I GF  AGE  +A  +F+ ++ +G  P+V T+N L+    +    + A
Sbjct: 569 RCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKA 628

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +++ EM   G++P E TYT ++  +    D  KAFE ++ M+  G   DV+TY  L+  
Sbjct: 629 VEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKA 688

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G M+ A  +   M   K+  N  VYN++I G+ + G+ + A  L+ +MN++G+ P+
Sbjct: 689 CCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPD 748

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           I +Y+S I   C+ G    A   + +M   G+KP+V  Y  L     N
Sbjct: 749 IHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWAN 796



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 205/422 (48%), Gaps = 1/422 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II A+ ++   D+A     +M + G+    + +++++       + +K  + F   
Sbjct: 401 IYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL 460

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C     V ++G LI    + G ++KA EV   ++ +G   N+  Y+ LI+G  K  D 
Sbjct: 461 KECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDW 520

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F  + + GL      Y  +I      G         ++MQ     P+  T+  +
Sbjct: 521 TNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPI 580

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           IH +   G++    ++FD MR       V T+N L+ GL ++ ++++A  +LD+M +AG+
Sbjct: 581 IHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGV 640

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           SP+  TY  ++ G+   G+T KAF  F ++++ G    V TY  L++A  K+G  + A  
Sbjct: 641 SPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALA 700

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M + G  PD++TY   I+  C
Sbjct: 701 VTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACC 760

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M  A+K    M    ++PN   Y  +I G+       +AL    E+   GL P+ A
Sbjct: 761 KAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKA 820

Query: 527 SY 528
            Y
Sbjct: 821 VY 822



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 197/424 (46%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++      GD+++A +    +   G  P+  +YTSLI       D+E A    RK+ 
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMN 356

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  +  TY++++ G  K G  +    +++K +    + + Y Y  +I+ YC    + 
Sbjct: 357 EEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMD 416

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L  EM    +   +  Y+T++ G       ++   +  ++K  G +P+VITY  LI
Sbjct: 417 RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLI 476

Query: 358 DGFCDAGETDK-----------------------------------AFRLFNQLKSNGQS 382
           + +   G+  K                                   AF +F  +  +G  
Sbjct: 477 NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLK 536

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P VV YN +I+AF   GN   A  +V+EM++    P+  T+  +I  F R+ +M +A E+
Sbjct: 537 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEI 596

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M++SG  P V+T+  L+ GL  K  M++A ++ + M    + P++  Y  ++ GY  
Sbjct: 597 FDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAA 656

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A     +M  +GL  ++ +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 657 LGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFV 716

Query: 563 YNIL 566
           YNIL
Sbjct: 717 YNIL 720



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 1/367 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +I+ + K     +AL     M   G++    T++ L+   +K   +   +  F +  
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  ++ DV  +  +IK  C  G++++A  ++ ++++    P    +  +I G  + G++ 
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           RA  +F  +   G + T HT+  L+ GL +    +   E  ++M L GVSP  +TY  ++
Sbjct: 592 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIM 651

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H Y   G   + F+ F +MR+  +  +V TY  L+   CK  R+Q A  +  +M    I 
Sbjct: 652 HGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIP 711

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+   G  P + TY   I A  KAG+   A+  
Sbjct: 712 RNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKT 771

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EME  G+ P+  TYT LI  +  +   EKA   +  ++ +G  PD   Y  L+  L  
Sbjct: 772 MEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLS 831

Query: 468 KGNMKEA 474
           +  + EA
Sbjct: 832 RATVAEA 838



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 158/337 (46%), Gaps = 5/337 (1%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           + Y  +I+  LK +    A   F  ++  G++P    +N+++       + D+      E
Sbjct: 505 KTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKE 564

Query: 167 ---NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
               RC+      +F  +I G   AG++ +A E+ + +   G  P V  + +L+ G  + 
Sbjct: 565 MQKERCRP--TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEK 622

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
             +E+A  +  ++   G+   +HTYT ++ G    G     FE++ KM+  G+   ++TY
Sbjct: 623 RKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTY 682

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
             L+   C  G++     +  EM  +++  N   YN LI G  +   + EA  L+ QM  
Sbjct: 683 EALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQ 742

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G+ P++ TY   I+  C AG+  +A +   ++++ G  P+V TY  LI  ++ A   + 
Sbjct: 743 EGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEK 802

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           A     E++  G+ P +  Y  L+ S +    + +A+
Sbjct: 803 ALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 35/324 (10%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PS   +  ++  Y   G +    + F+ MR R +  +   Y +LI        ++EA   
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           + +M   GI  +++TY+ ++ GF   G  + A   F + K    + +   Y  +I A+ +
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
           A N   A  LVREMEE GI      Y  ++D +    + EK   ++  +++ GF+P V T
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471

Query: 458 YGVLIH-------------------GLCMKGNMKEASKLFNSMWETK------------- 485
           YG LI+                    + +K NMK  S L N   + K             
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531

Query: 486 ---LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              L+P+ V+YN +I  +C  GN  RA+ ++ EM ++   P   ++   I    + G+  
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591

Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
            A  + + M + G  P+V  +N L
Sbjct: 592 RALEIFDMMRRSGCIPTVHTFNAL 615



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 82/186 (44%)

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           + PS   + +++  +++ G+   A      M  RGI PS   YT LI ++    DME+A 
Sbjct: 290 KKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEAL 349

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
                M + G    + TY +++ G    GN + A   F    E     N  +Y  +I+ Y
Sbjct: 350 SCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY 409

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
           C+  N  RA  L+ EM E+G+   +  Y + +          +  ++  ++ + G  PSV
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469

Query: 561 SLYNIL 566
             Y  L
Sbjct: 470 ITYGCL 475



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + +++  + R  DM +A + +  M+  G  P  + Y  LIH   +  +M+
Sbjct: 287 ERIKKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDME 346

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
           EA      M E  +E + V Y++++ G+ K GN+  A     +  E+    N   Y + I
Sbjct: 347 EALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNII 406

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              CQ      AE L+ +M + G+   + +Y+ +
Sbjct: 407 YAYCQACNMDRAEALVREMEEEGIDAPLDIYHTM 440


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 216/449 (48%), Gaps = 5/449 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN--TFNSLLIFVIKSCSFDKGWLFFSE 166
           Y  ++      + S QAL   H M D   R   +   + +++  +++    DK +  F  
Sbjct: 174 YTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDA 233

Query: 167 --NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
             +R     DV ++  +I    +   ++KA +V  ++ + G  P+ ++YTSL+ G C +G
Sbjct: 234 MLDRGPSP-DVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSG 292

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
             + A  +F+K+   G+     TYT L+  L KNG   +  + ++ +   G  P   TY 
Sbjct: 293 KPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYG 352

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+H Y  EG + E   L D M  + +      +N ++    K  +V EA  +   M+  
Sbjct: 353 TLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 412

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++P+++ Y  ++D  C AG  D A   FN LKS G +P++V +  LI            
Sbjct: 413 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKV 472

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +L  EM +RGI    + +  ++ +  +   + +A  ++ LM + G  P+  TY  LI G
Sbjct: 473 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 532

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C+ G M EA KL   M    ++P+DV YN +I GY + G     L LL EM+ KG+ P 
Sbjct: 533 YCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPG 592

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           I +Y   +  L Q G+   A+ L  +M+K
Sbjct: 593 IVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 196/388 (50%), Gaps = 10/388 (2%)

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE------ 238
           C   G   +   VL ++ E+G  P++  YT L+ G C +   ++A  L   + +      
Sbjct: 146 CTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCP 205

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
           L +VA    YT +I GL + G     +  ++ M   G SP + TY+ +I        + +
Sbjct: 206 LDVVA----YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 261

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
             ++F  M    V  + + Y +L+ G C   + +EA  +  +M   G+ P+V+TY  L+D
Sbjct: 262 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 321

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
             C  G++ +A ++F+ L   G  P   TY  L+  ++  G      DL+  M ++G+  
Sbjct: 322 YLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 381

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
               + +++ ++ + + +++A  ++S M++ G +PD+  YG ++  LC  G + +A   F
Sbjct: 382 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQF 441

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           NS+    L PN VV+  +I G C      +   L  EM ++G+  +   +++ +G LC+ 
Sbjct: 442 NSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKK 501

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G+  EA+ L + M+++G++P+ + YN L
Sbjct: 502 GRVIEAKNLFDLMVRIGIEPNTNTYNTL 529



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 10/312 (3%)

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE-----MRHREVACNVVTYN 319
           F    +      +P++ TY  +I      G++   F          +RH        +  
Sbjct: 84  FNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQG 143

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
            L     + MR+   + +L +M   G  P++ +Y  L+ G CD   + +A  L + +  +
Sbjct: 144 PLCTAGGRAMRM---DIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 200

Query: 380 -GQSP-SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
            G+ P  VV Y  +I    + G    A  L   M +RG +P  VTY+ +I +  ++  M+
Sbjct: 201 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 260

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           KA ++++ M K+G  PD   Y  L+HG C  G  KEA  +F  M    +EP+ V Y  ++
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 320

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
              CK G S  A ++   + ++G  P+  +Y + +     +G   E   LL+ M+K G++
Sbjct: 321 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 380

Query: 558 PSVSLYNILYRA 569
               ++N++  A
Sbjct: 381 LGHHIFNMIMGA 392


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 216/449 (48%), Gaps = 6/449 (1%)

Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL- 173
           A + S  ++ AL  F ++L  G+     + N  L  V +         F    R    + 
Sbjct: 27  ARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMV 86

Query: 174 --DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-K 230
              V+++GILI  CC AG L+  F  L  + + GF    +I+  L+ G C +   + A  
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS--PSLYTYNCLIH 288
           ++ R + ELG V    ++T+++ GL      ++  E    M  +G    P++ +Y+ +  
Sbjct: 147 IVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTD 206

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
                G   + +  + EM  R +  NVVTY+++I  LCK   + +A  + D+M   G++P
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N  TY  L+ GFC +G+  +A +   ++ SNG  P+VVTY+  +    K G    A  + 
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIF 326

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M +RG+ P   TY+ L+  +     + +   ++ LM +S   PD Y +  LI+    +
Sbjct: 327 YSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + EA  +F+ M    L+PN V YN +I GYCK      AL L  EM   G+ PN  +Y
Sbjct: 387 GKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITY 446

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           +  +  L + G+   A+    Q++K G K
Sbjct: 447 NIMLQGLFRTGRTGTAKEFYVQIIKSGKK 475



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 3/297 (1%)

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA- 334
           V+P+++TY  LI   C+ G++  GF     +  +      + +N L+ GLC + R  +A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS--PSVVTYNVLI 392
           + +L  M   G  PNV ++  ++ G C    + +A  L + +  +G    P+VV+Y+ + 
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205

Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               K G+   A    REM +R I P+ VTY+ +I +  +   M+KA E++  M K+G +
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           P+ +TY  L+HG C  G + EA K    M    +EPN V Y+  +   CK G    A ++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
              M ++GL P+I +YSS +     +G   E   L + M++  ++P   ++N L  A
Sbjct: 326 FYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYA 382



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 140/274 (51%), Gaps = 1/274 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++ D  LK    D+A   + +MLD  + P   T++S++  + K  + DK         
Sbjct: 201 YSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMV 260

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  V  + +++  L+ G C +G L +A + L ++   G  PNVV Y+S +D  CKNG   
Sbjct: 261 KNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCT 320

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +F  + + GL     TY+ L+ G    G   +    ++ M  + + P  Y +N LI
Sbjct: 321 EARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLI 380

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +    +GKV E   +F +MRH+ +  N VTYNTLI G CK  R++ A  L  +M   G+S
Sbjct: 381 YASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVS 440

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           PN ITYN ++ G    G T  A   + Q+  +G+
Sbjct: 441 PNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGK 474


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 202/444 (45%), Gaps = 36/444 (8%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
           D AL  F++ML     P +  F  LL  + K   +       ++ +   +  DVY+  IL
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C    L  AF VL +L ++G  P+   + +LI G C  G          KIGE   
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG----------KIGE--- 200

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                                     ++K    G  P + TY  L++  C  G  S   +
Sbjct: 201 ----------------------ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 238

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L   M  +    NV+ YNT+I  LCK+ +V EA  L  +M   GISP++ TYN LI   C
Sbjct: 239 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 298

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           +  E      L N++ ++   P+VV ++ ++ A  K G   +A D+V  M +RG+ P  V
Sbjct: 299 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 358

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT L+D      +M++A +++  M   G  P+V +Y +LI+G C    M +A  L   M
Sbjct: 359 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 418

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
               L  + V YN +I G C  G    A+ L  EM   G +P++ +Y   +  LC++   
Sbjct: 419 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 478

Query: 542 PEAEVLLNQMLKLGLKPSVSLYNI 565
            EA VLL  +    L   + +YNI
Sbjct: 479 AEAMVLLKAIEGSNLDADILVYNI 502



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 190/387 (49%), Gaps = 8/387 (2%)

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L+ A    N++  M   P+ V +T L+    K         L  ++   G+    +T  +
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           LI   C L + G     F    K+   G  P   T+N LI   C EGK+ E   LFD+  
Sbjct: 153 LINSFCHLRRLGY---AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
                 +VVTY TL+ GLCK      A RLL  M      PNVI YN +ID  C   +  
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           +AF LF+++ + G SP + TYN LI A       K  + L+ EM    I P+ V ++ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
           D+  +   +  A ++  +M K G  PDV TY  L+ G C++  M EA K+F++M      
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN   YN++I GYC+     +A+ LL +M+ +GL+ +  +Y++ I  LC  G+   A  L
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449

Query: 548 LNQMLKLGLKPSVSLYNIL--YRAKNN 572
            ++M+  G  P +  Y IL  Y  KN+
Sbjct: 450 FHEMVASGQIPDLVTYRILLDYLCKNH 476



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 195/394 (49%), Gaps = 7/394 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGILIKGCC 186
           QM   G+ P   T N   I +   C   +    FS     ++L    D  +F  LI+G C
Sbjct: 137 QMDSFGIPPDVYTLN---ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 193

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
             G + +A  + ++    GF P+VV Y +L++G CK G+   A  L R + +        
Sbjct: 194 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 253

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y  +I  L K+    + F  + +M   G+SP ++TYN LIH  CN  +      L +EM
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 313

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
            + ++  NVV ++T++  LCKE  +  A  ++D M   G+ P+V+TY  L+DG C   E 
Sbjct: 314 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D+A ++F+ +   G  P+V +YN+LI  + +      A  L+ +M  +G+    VTY  L
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I        ++ A  ++  M  SG  PD+ TY +L+  LC   ++ EA  L  ++  + L
Sbjct: 434 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           + + +VYN+ I G C+ G    A  L   ++ +G
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 36/358 (10%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
           ++L  G +P + TFN+L+  +       +    F +   +  + DV ++G L+ G C+ G
Sbjct: 172 KLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVG 231

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
           + + A  +L  + +    PNV+ Y ++ID  CK+  +  A  LF ++   G+     TY 
Sbjct: 232 NTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 291

Query: 250 VLI------C-----------------------------GLFKNGLQKDGFEFYEKMQLN 274
            LI      C                              L K G+     +  + M   
Sbjct: 292 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 351

Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
           GV P + TY  L+  +C   ++ E  K+FD M H+    NV +YN LI G C+  R+ +A
Sbjct: 352 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 411

Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
             LL+QM + G+  + +TYN LI G C  G    A  LF+++ ++GQ P +VTY +L+  
Sbjct: 412 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 471

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
             K  +   A  L++ +E   +    + Y I ID   R+ ++E A +++S +   GF+
Sbjct: 472 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 107/207 (51%)

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           D A   FN++      PS V +  L+ + +K  +      L  +M+  GI P   T  IL
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+SF     +  AF + + + K G  PD  T+  LI GLC++G + EA  LF+       
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +P+ V Y  ++ G CK GN+  A+RLL  M +K   PN+ +Y++ I  LC+D +  EA  
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
           L ++M+  G+ P +  YN L  A  N+
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNL 300



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R Y  +I+ + + +  D+A+    QM   G+   + T+N+L+  +           
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 163 FFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F E     ++ D+ ++ IL+   C+   L +A  +L  +E      ++++Y   IDG C
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508

Query: 222 KNGDIERAKMLFRKIGELGLVA 243
           + G++E A+ LF  +   G  A
Sbjct: 509 RAGELEAARDLFSNLSCQGFAA 530


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 198/401 (49%), Gaps = 13/401 (3%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +   L+ G C+AGDL KA  ++ ++ E+G SPN   + + I G C N ++++A  LF
Sbjct: 165 DVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLF 224

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG--------VSPSLYTYNC 285
             +   G+   + TY +LI  L K GL KD  +  EK+  +         ++ +++   C
Sbjct: 225 STMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGC 284

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L      +G + +    +DEM  R    +VV YN LI G C    +  A R   +M   G
Sbjct: 285 L-----KKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRG 339

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P++ TYN LI GFC  G  D+A  +   +   G +P +++Y ++I+     G+   A+
Sbjct: 340 LLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRAN 399

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +  M E  + P  + + ++ID   R  D+  A  +   M   G  P+V+TY  LIH  
Sbjct: 400 QFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQ 459

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
              GN+ +A  +   M    + P+ V YN++I   C  G  + ALRL  EM  +G  P+I
Sbjct: 460 IKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDI 519

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  I   C  G   EAE LL ++ + GL    + + IL
Sbjct: 520 ITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQIL 560



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 38/409 (9%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           N C +E+D      +I+  C  G L  A  + N++ + G  P+V+ +  L++G CK GD+
Sbjct: 123 NGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDL 182

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L R++ E+G                                    SP+  T+N  
Sbjct: 183 EKADNLVREMLEIG-----------------------------------PSPNCATFNTF 207

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM---KM 343
           I  YC    V +   LF  M +  +  N VTYN LI  LCK+  +++A +LL+++     
Sbjct: 208 IKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDC 267

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
              + ++IT    +DG    G+  +A   ++++   G    VV YNVLI  F    +   
Sbjct: 268 GKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNS 327

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A     EM +RG+ P   TY  LI  F +  ++++A  ++ +M K G +PD+ +Y ++I 
Sbjct: 328 AYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQ 387

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GLC+ G++  A++    M E  + P  +++N++I G+ + G+   AL +  +M   G+ P
Sbjct: 388 GLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPP 447

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           N+ +Y++ I    + G   +A  +  +ML  G+ P V  YN+L  A  N
Sbjct: 448 NVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACN 496



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAG 189
           +ML+ G  P   TFN+ +     + + DK  +LF +     +  +  ++ ILI   C+ G
Sbjct: 191 EMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKG 250

Query: 190 DLNKAFEVLNQL--EEMGF-SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
            L  A ++L ++  ++ G  + +++  T  +DGC K GD+ +A + + ++ + G      
Sbjct: 251 LLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVV 310

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            Y VLI G          + ++ +M   G+ P ++TYN LI  +C  G + E   +   M
Sbjct: 311 AYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVM 370

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
                A ++++Y  +I GLC    V  A + L  M    + P  + +N +IDG    G+ 
Sbjct: 371 SKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDL 430

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A  + +Q+ S G  P+V TYN LI A  K GN   A  + +EM   GI P  VTY +L
Sbjct: 431 SNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLL 490

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +      +  A  +Y  M + G+ PD+ TY  LI G C++G++ EA +L   +  + L
Sbjct: 491 IGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGL 550

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRL 512
             +   + ++I  YC+     RA  L
Sbjct: 551 SIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 162/369 (43%), Gaps = 4/369 (1%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P      + + I  +  +   D+AL+ F  M +SG+ P   T+N L+  + K        
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 162 LFFS---ENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                  ++ C  E  D+ +  I + GC + GD+ +A    +++ + G   +VV Y  LI
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
            G C   D+  A   F ++ + GL+    TY  LI G  K G   +    +  M   G +
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P L +Y  +I   C  G V    +    M    +    + +N +I G  +   +  A  +
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
            DQM   GI PNV TYN LI      G    A  +  ++  NG  P VVTYN+LI A   
Sbjct: 437 RDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACN 496

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G    A  L  EM  RG  P  +TYT LI  F     + +A E+ + +Q+SG S D   
Sbjct: 497 FGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556

Query: 458 YGVLIHGLC 466
           + +LI   C
Sbjct: 557 FQILIQKYC 565


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 190/387 (49%), Gaps = 2/387 (0%)

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVV--IYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           +G   ++ E  N ++EMG+ P ++   Y S++    KN  ++ A+ LF ++   G+    
Sbjct: 264 SGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNN 323

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TYT +I   F     +D  +  + M  N  +P + TY  +I   C    + + + +  +
Sbjct: 324 LTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQK 383

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           MR      N+ TYN LI GLC   R +EA  L+  M+  G+ PN+ TY  L  G C    
Sbjct: 384 MRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRR 443

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+A  +FN+  + G  P+ VTYN L+  + +      A D+++EM +   TP  VTYT 
Sbjct: 444 LDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI   V+ + +  A  M+  M+  G+  +  T  +L  GL   GN K+AS  +  M +  
Sbjct: 504 LIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRG 563

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
              +   Y + I      G    A  LL EM  KG  PN+ +Y++ I   C+ G+  +A+
Sbjct: 564 FAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDAD 623

Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNN 572
            +LN M++ G+ P    YNIL +  +N
Sbjct: 624 AMLNFMIENGIGPDTGSYNILIKEFHN 650



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 245/528 (46%), Gaps = 36/528 (6%)

Query: 1   MAQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMS 59
           MAQ    +     LNL     +     A   F WA +Q G  H   +   ++ +L     
Sbjct: 177 MAQDLNPDAVVKVLNL-----QTDAQNALRFFQWADKQEGYDHNTDAYFTMIDIL----- 226

Query: 60  SHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKS 119
                           GR  +  FT    L  L Q   +    +T+S L+ S + ++ +S
Sbjct: 227 ----------------GR--AKMFTE---LQSLLQKMQTQGREITRSMLH-SFVMSYGRS 264

Query: 120 RLSDQALFYFHQMLDSGVRPR--SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVY 176
               ++L  F+ M + G  P      +NS+L+ ++K+   D     F++     V  +  
Sbjct: 265 GRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNL 324

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  +I+       +  A ++L+ + +  ++P+VV YT +I   CK   IE+A  + +K+
Sbjct: 325 TYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKM 384

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
            E G     +TY  LI GL      ++  E    M+  GV P++YTY  L H  C   ++
Sbjct: 385 RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRL 444

Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
               ++F+E   R +  N VTYNTL+ G C+  R+ EA  +L +M     +P+ +TY  L
Sbjct: 445 DRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTL 504

Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           I G     +   A R+ +++++ G   +  T N+L R  ++ GN K AS   R M++RG 
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGF 564

Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             S   Y + I     + +ME+A  +   M   G+SP++ TY  +I G C +G + +A  
Sbjct: 565 AYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADA 624

Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
           + N M E  + P+   YN++I  +  +G +  A +L     E+G+V N
Sbjct: 625 MLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLN 672


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 183/354 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+Y F  LI    E+G +  A E     ++  F        ++++   K    +     +
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           ++I E G  A+ + + +L+    K G  +     ++ +   G+ PS+ ++N L++ Y   
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + EGF+L + MR   V  +V TY+ LI GLCKE R+ EA  L  +M   G+ PN +T+
Sbjct: 185 GDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTF 244

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G  D A  ++ Q+ + G SP VVTYN LI    K G+ K A  L+ EM  
Sbjct: 245 TTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSR 304

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P ++TYT LID   +  D+E AFE+   M K     D   Y  LI GLC +G   +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVD 364

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           A K+   M    L+P+D  Y M++  +CK+G+  +A  LL EM   G VP + +
Sbjct: 365 AEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 183/358 (51%), Gaps = 35/358 (9%)

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           ++ +++ LI    ++G I  A   FR   +        T   ++  L K    K  + FY
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           +++   G   SLY +N L+H +C EG                                 E
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEG---------------------------------E 151

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
           MR+  A+ + D +   G+ P+V+++N L++G+   G+ D+ FRL N ++++G  P V TY
Sbjct: 152 MRL--AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTY 209

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           +VLI    K      A+ L  EM + G+ P+ VT+T LID   ++  ++ A ++Y  M  
Sbjct: 210 SVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLN 269

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GFSPDV TY  LI+GLC KG++K+A  L + M    L+P+ + Y  +I G CKEG+   
Sbjct: 270 QGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLET 329

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           A  L   M ++ +  +   Y++ I  LCQ+G+  +AE +L +ML++GLKP    Y ++
Sbjct: 330 AFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMI 387



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 209/421 (49%), Gaps = 14/421 (3%)

Query: 40  LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS--GRITSSSFTPRSLLCHLTQLFP 97
           ++HT QS   ++  L +         A++LI  ++S  G+ ++S+            +  
Sbjct: 9   VRHTLQSYCTMIHFLCT---HQMFLEAKSLIQTVVSRKGKDSASAV--------FAAILE 57

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           +     +   ++  +I A+L+S     A+  F        R   +T  ++L  ++K   F
Sbjct: 58  TKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYF 117

Query: 158 DKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
              W F+ E   C     +Y F IL+   C+ G++  A  V + + + G  P+VV + +L
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           ++G  K GD++    L   +   G+    +TY+VLI GL K     +    + +M  NG+
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGL 237

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
            P+  T+  LI  +C  G++     ++ +M ++  + +VVTYNTLI GLCK+  +++A  
Sbjct: 238 VPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARY 297

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
           LLD+M   G+ P+ ITY  LIDG C  G+ + AF L  ++         V Y  LI    
Sbjct: 298 LLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLC 357

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G +  A  ++REM   G+ P + TYT++++ F +  D++KA E+   MQ++G  P V 
Sbjct: 358 QEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVV 417

Query: 457 T 457
           T
Sbjct: 418 T 418



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 1/192 (0%)

Query: 376 LKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           L++ G Q   +  ++ LI A+ ++G  + A +  R  ++        T   +++  ++  
Sbjct: 56  LETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXK 115

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             +  +  Y  + + G+   +Y + +L+H  C +G M+ A  +F+++ +  L P+ V +N
Sbjct: 116 YFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFN 175

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ GY K G+     RL   M   G+ P++ +YS  I  LC++ +  EA  L  +ML  
Sbjct: 176 TLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDN 235

Query: 555 GLKPSVSLYNIL 566
           GL P+   +  L
Sbjct: 236 GLVPNGVTFTTL 247


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 246/559 (44%), Gaps = 26/559 (4%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P+ AF+      R G   T  +  +   LL         A         ++G +T+ +  
Sbjct: 35  PIAAFATATERVRAGTLSTEDTHHLFDELLRQTTPVPERA---------LNGFLTALARA 85

Query: 85  PRSLLCH-----LTQLFPSSSNPVTKSRL-------YESIIDAHLKSRLSDQALFYFHQM 132
           P S  C         LF        + R+       Y  ++D   ++         F + 
Sbjct: 86  PSSATCRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRF 145

Query: 133 LDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSENRCKVELDVYSFGILIKGCCEAGD 190
           L +G++      N LL  +  +   D     L        VE D  S+  ++K  CE   
Sbjct: 146 LKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSR 205

Query: 191 LNKAFEVLNQL--EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
             +A ++L+ +  +  G SPNVV Y ++I G  + G++ +A  LF ++ + G+V    TY
Sbjct: 206 SQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTY 265

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
           +  I  L K            +M  NG  P   TYNC+IH Y   G+  E   +F EM  
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R +  ++ T N+ +  LCK  + +EA    D M   G  P+++TY+ L+ G+   G    
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD 385

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
              LFN ++ NG       YN+LI A+ K G    A  +  +M+ERG+ P   TY  +I 
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL-E 487
           +F R   +  A + ++ M   G  PD   Y  LI G CM GN+ +A +L + M    +  
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPR 505

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
           PN V +N +I   CKEG    A  +   +   G  P++ +++S I      GK  +A  +
Sbjct: 506 PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGV 565

Query: 548 LNQMLKLGLKPSVSLYNIL 566
           L+ M+ +G++P V  Y+ L
Sbjct: 566 LDAMISVGIEPDVVTYSAL 584



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 226/497 (45%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-------------------- 148
           Y S IDA  K+R  D+A     QM+ +G  P   T+N ++                    
Sbjct: 265 YSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMT 324

Query: 149 -------IFVIKS-----CSFDK---GWLFFSENRCKV-ELDVYSFGILIKGCCEAGDLN 192
                  IF   S     C   K      FF     K  + D+ ++ +L+ G    G + 
Sbjct: 325 RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVV 384

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
               + N +E  G   +  +Y  LID   K G ++ A ++F ++ E G++    TY  +I
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
               + G   D  + + +M   G+ P    YN LI  +C  G + +  +L  EM  R + 
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504

Query: 313 -CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             N V +N++I  LCKE RV EA+ + D +   G  P+VIT+N LIDG+   G+ +KAF 
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + + + S G  P VVTY+ L+  + + G       L REM  +G+ P+ +TY I++    
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
                  A +M   M +SG + D+ T G+++ GLC      EA  LF  +    ++ N  
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIA 684

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           + N MI    K      A  L   ++  GLVPN ++Y   I  L ++G   EA+ + + M
Sbjct: 685 IINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLM 744

Query: 552 LKLGLKPSVSLYNILYR 568
            K G  PS  L N + R
Sbjct: 745 EKSGCAPSSRLLNNIIR 761



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 218/500 (43%), Gaps = 39/500 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQML--DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           Y +++ +  +   S +AL   H M+    G  P   ++N+++    +     K    F E
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252

Query: 167 NRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
              + V  DV ++   I   C+A  ++KA  VL Q+   GF P+ V Y  +I G    G 
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
            +    +FR++   GL+    T    +  L K+G  K+  EF++ M   G  P L TY+ 
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+H Y  EG V +   LF+ M    +  +   YN LI    K   + EA  +  QM+  G
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+  TY  +I  F   G    A   FNQ+ + G  P  + YN LI+ F   GN   A 
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492

Query: 406 DLVREMEERGIT------------------------------------PSEVTYTILIDS 429
           +L+ EM  RGI                                     P  +T+  LID 
Sbjct: 493 ELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           +     MEKAF +   M   G  PDV TY  L+ G C  G + +   LF  M    ++P 
Sbjct: 553 YGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPT 612

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            + Y +++ G   +G +  A ++  EM E G   +I++    +G LC++    EA  L  
Sbjct: 613 TITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFK 672

Query: 550 QMLKLGLKPSVSLYNILYRA 569
           ++  + +K ++++ N +  A
Sbjct: 673 KLGAMNVKFNIAIINTMIDA 692



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 163/361 (45%), Gaps = 38/361 (10%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK-LFDE 305
           TY +L+    +      GF  + +    G+   +   N L+   C+  +  +    L   
Sbjct: 121 TYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHR 180

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAGISPNVITYNKLIDGFCDA 363
           M    V  + ++Y+T++  LC++ R Q A  LL  M  K  G SPNV++YN +I GF   
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240

Query: 364 GETDKAFRLFN-----------------------------------QLKSNGQSPSVVTY 388
           GE  KA  LF+                                   Q+ SNG  P  VTY
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           N +I  +S  G  K  + + REM  RG+ P   T    + S  +    ++A E +  M  
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            G  PD+ TY VL+HG   +G + +   LFNSM    +  +  VYN++I  Y K G    
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           A+ +  +M E+G++P+  +Y + I    + G+  +A    NQM+ +GLKP   +YN L +
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480

Query: 569 A 569
            
Sbjct: 481 G 481



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 199/416 (47%), Gaps = 2/416 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    +Y  +IDA+ K  + D+A+  F QM + GV P + T+ +++    +         
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGC 220
            F++     ++ D   +  LI+G C  G+L KA E+++++   G   PN V + S+I+  
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G +  A+ +F  +  +G      T+  LI G    G  +  F   + M   G+ P +
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            TY+ L+  YC  G++ +G  LF EM  + V    +TY  ++ GL  + R   A+++  +
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M  +G + ++ T   ++ G C     D+A  LF +L +     ++   N +I A  K   
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A++L   +   G+ P+  TY ++I + ++   +E+A  M+SLM+KSG +P       
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           +I  L  KG + +A    + +    +       ++M+  + ++G     ++ L  M
Sbjct: 759 IIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAM 814



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 175/378 (46%), Gaps = 4/378 (1%)

Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           Y ++I A  +  RL+D A+  F+QM+  G++P +  +NSL+       +  K     SE 
Sbjct: 440 YGTVIAAFSRMGRLAD-AMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            +R     +   F  +I   C+ G + +A ++ + +  +G  P+V+ + SLIDG    G 
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           +E+A  +   +  +G+     TY+ L+ G  +NG   DG   + +M   GV P+  TY  
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           ++H   N+G+     K+  EM       ++ T   ++ GLC+     EA  L  ++    
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           +  N+   N +ID      + ++A  LF+ + + G  P+  TY V+I    K G+ + A 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++   ME+ G  PS      +I   +   ++ KA    S +     S +  T  +++   
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLF 798

Query: 466 CMKGNMKEASKLFNSMWE 483
             KG  +E  K   +M++
Sbjct: 799 SRKGKYREQIKSLPAMYQ 816



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 34/331 (10%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P   +  + SII++  K     +A   F  ++  G RP   TFNSL              
Sbjct: 504 PRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL-------------- 549

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                      +D Y            G + KAF VL+ +  +G  P+VV Y++L+DG C
Sbjct: 550 -----------IDGYGL---------VGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           +NG I+   +LFR++   G+  T  TY +++ GLF +G      +   +M  +G +  + 
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           T   ++   C      E   LF ++    V  N+   NT+I  + K  + +EA  L D +
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ PN  TY  +I      G  ++A  +F+ ++ +G +PS    N +IR   + G  
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVR 432
             A + + +++ + I+    T ++++  F R
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSR 800


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 230/459 (50%), Gaps = 2/459 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + SII+ + K  + ++A+    +M+   + P    +  LL    ++   +    F+ E +
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473

Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +E +   F IL+     +G + +A  ++  +   G   +V  Y+SL+DG  K G+  
Sbjct: 474 SWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNES 533

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  + +++ E  +      Y  L  GL + G  +    F   ++L G++P   TYN ++
Sbjct: 534 AALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIEL-GLTPDCVTYNSVM 592

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           + Y  +GK      L +EM+   V  N+VTYN LI GLCK   +++   +L +M   G  
Sbjct: 593 NTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYV 652

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P  I +  L+  +  + + D   ++  +L   G + + + YN LI    + G +K A+ +
Sbjct: 653 PTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVV 712

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM  +GI+   VTY  LI  +     +EKAF  YS M  SG SP++ TY  L+ GL  
Sbjct: 713 LTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLST 772

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G M++A KL + M E  L PN   YN+++ G+ + GN   +++L  EM  KG +P   +
Sbjct: 773 NGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGT 832

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           Y+  I    + GK  +A  LLN+ML  G  P+ S Y++L
Sbjct: 833 YNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVL 871



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 239/524 (45%), Gaps = 64/524 (12%)

Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD-- 158
           N V     Y +++    K  L+DQ      +M+  GV   S T N   I V   C     
Sbjct: 70  NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCN---ILVKGYCQIGLV 126

Query: 159 --KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
               W+  +     V LD      L+ G CE G +++A +++    + G  P++V Y +L
Sbjct: 127 QYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTL 186

Query: 217 IDGCCKNGDIERAKML------FRKIGELGLV---------------ATQHTYTVLICGL 255
           ++  CK GD+ +A+ +      FR+  E G++                T  T+T LI   
Sbjct: 187 VNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAY 246

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
            K+    D F  YE+M ++GV P + T + +++  C  GK++E   L  EM +  +  N 
Sbjct: 247 CKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNH 306

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGIS---------------------------- 347
           V+Y T+I  L K  RV EA     QM + GIS                            
Sbjct: 307 VSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQT 366

Query: 348 -------PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
                  PN +TY  L+DG C  G+ + A  +  +++     P+VVT++ +I  ++K G 
Sbjct: 367 ILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGM 426

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
              A +++R+M +  I P+   Y IL+D + R+   E A   Y  M+  G   +   + +
Sbjct: 427 LNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDI 486

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L++ L   G MKEA  L   +    +  +   Y+ ++ GY KEGN   AL ++ EM EK 
Sbjct: 487 LLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKD 546

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           +  ++ +Y++    L + GK+ E + + ++M++LGL P    YN
Sbjct: 547 MQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYN 589



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 230/495 (46%), Gaps = 49/495 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y  ++D + ++   + A  ++ +M   G+   +  F+ LL  + +S    +      + 
Sbjct: 448 VYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDI 507

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K + LDV+++  L+ G  + G+ + A  V+ ++ E     +VV Y +L  G  + G  
Sbjct: 508 LSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY 567

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E  K +F ++ ELGL     TY  ++   F  G  ++  +   +M+  GV P++ TYN L
Sbjct: 568 E-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNIL 626

Query: 287 IHEYCNEGKVSEGFKLFDEM--------------------RHREVAC------------- 313
           I   C  G + +   +  EM                    R R+                
Sbjct: 627 IGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGL 686

Query: 314 --NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             N + YNTLI  LC+    ++A  +L +M + GIS +++TYN LI G+C     +KAF 
Sbjct: 687 NLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFN 746

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
            ++Q+  +G SP++ TYN L+   S  G  + A  LV EM ERG+ P+  TY IL+    
Sbjct: 747 TYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHG 806

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           R  +   + ++Y  M   GF P   TY VLI      G M++A +L N M      PN  
Sbjct: 807 RVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSS 866

Query: 492 VYNMMIFGYCKEGN----------SYR--ALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            Y+++I G+CK             SY+  A +LL EM EKG VP+ ++           G
Sbjct: 867 TYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPG 926

Query: 540 KWPEAEVLLNQMLKL 554
           K  +A+ LL  ++ L
Sbjct: 927 KRDDAKRLLKTVIGL 941



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 233/515 (45%), Gaps = 56/515 (10%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---- 166
           +++D + +  L  +AL        +GV+P   T+N+L+    K     K     +E    
Sbjct: 150 TLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGF 209

Query: 167 ---------NRCKVEL---------DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
                    N C VE           V ++  LI   C+   ++  F +  Q+   G  P
Sbjct: 210 RRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMP 269

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           +VV  +S++ G C++G +  A ML R++  +GL     +YT +I  L K+G   + F   
Sbjct: 270 DVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQ 329

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +M + G+S  L     ++      GK  E  ++F  +    +  N VTY  L+ G CK 
Sbjct: 330 SQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKV 389

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             V+ AE +L +M+   + PNV+T++ +I+G+   G  +KA  +  ++      P+V  Y
Sbjct: 390 GDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY 449

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +L+  + + G  + A+   +EM+  G+  + + + IL+++  RS  M++A  +   +  
Sbjct: 450 AILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS 509

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMK----------------------------------EA 474
            G   DV+ Y  L+ G   +GN                                    E 
Sbjct: 510 KGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP 569

Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
             +F+ M E  L P+ V YN ++  Y  +G +  AL LL EM   G++PN+ +Y+  IG 
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGG 629

Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           LC+ G   +   +L++ML +G  P+  ++  L +A
Sbjct: 630 LCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 221/451 (49%), Gaps = 3/451 (0%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSF 178
           +L++ A+    +M + G+ P   ++ +++  ++KS    + +   S+   + + +D+   
Sbjct: 286 KLTEAAML-LREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLC 344

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             ++ G  +AG   +A E+   + ++   PN V YT+L+DG CK GD+E A+ + +K+ +
Sbjct: 345 TTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEK 404

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
             ++    T++ +I G  K G+     E   KM    + P+++ Y  L+  Y   G+   
Sbjct: 405 EHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEA 464

Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
               + EM+   +  N + ++ L+  L +   ++EA+ L+  +   GI  +V  Y+ L+D
Sbjct: 465 AAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMD 524

Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
           G+   G    A  +  ++        VV YN L +   + G  +  S   R M E G+TP
Sbjct: 525 GYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSR-MIELGLTP 583

Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
             VTY  +++++      E A ++ + M+  G  P++ TY +LI GLC  G +++   + 
Sbjct: 584 DCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVL 643

Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
           + M      P  +++  ++  Y +   +   L++  ++ + GL  N   Y++ I VLC+ 
Sbjct: 644 HEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRL 703

Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           G   +A V+L +M+  G+   +  YN L R 
Sbjct: 704 GMTKKANVVLTEMVIKGISADIVTYNALIRG 734



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 201/419 (47%), Gaps = 26/419 (6%)

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           C V  +V+S  +L+   C+ GDL  A   L  L    F    V Y +++ G CK G  ++
Sbjct: 39  CGVVPNVFSVNLLVHSLCKVGDLGLA---LGYLRNSVFDH--VTYNTVVWGFCKRGLADQ 93

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L  ++ + G+     T  +L+ G  + GL +        +   GV       N L+ 
Sbjct: 94  GFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVD 153

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM------- 341
            YC  G VS    L ++     V  ++VTYNTL+   CK   + +AE +++++       
Sbjct: 154 GYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDD 213

Query: 342 --------------KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                          +  + P V+T+  LI  +C     D  F L+ Q+  +G  P VVT
Sbjct: 214 ESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVT 273

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
            + ++    + G    A+ L+REM   G+ P+ V+YT +I + ++S  + +AF   S M 
Sbjct: 274 CSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMV 333

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G S D+     ++ GL   G  KEA ++F ++ +  L PN V Y  ++ G+CK G+  
Sbjct: 334 VRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVE 393

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  +L +M ++ ++PN+ ++SS I    + G   +A  +L +M+++ + P+V +Y IL
Sbjct: 394 FAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAIL 452



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 26/313 (8%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           PSL  +N L++E+   G VS+   L+ EM    V  NV + N L+  LCK   V +    
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCK---VGDLGLA 64

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L  ++ +      +TYN ++ GFC  G  D+ F L +++   G     VT N+L++ + +
Sbjct: 65  LGYLRNSVFDH--VTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A  ++  +   G+    +    L+D +     + +A ++     K+G  PD+ T
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182

Query: 458 YGVLIHGLCMKGNMKEASKLFNSM-------------------WE--TKLEPNDVVYNMM 496
           Y  L++  C +G++ +A  + N +                   W+    L+P  V +  +
Sbjct: 183 YNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  YCK         L  +M   G++P++ + SS +  LC+ GK  EA +LL +M  +GL
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGL 302

Query: 557 KPSVSLYNILYRA 569
            P+   Y  +  A
Sbjct: 303 DPNHVSYTTIISA 315


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 219/437 (50%), Gaps = 3/437 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--ENRCKVELDVYSFGILIKGCCEAG 189
           +LD G  P   TF +L+    K    D+ +  F   E R  +E D+ ++  LI G  +AG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAG 335

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            L    ++ +Q    G   +VV+++S ID   K+GD+  A ++++++   G+     TYT
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
           +LI GL ++G   + F  Y ++   G+ PS+ TY+ LI  +C  G +  GF L+++M   
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
               +VV Y  L+ GL K+  +  A R   +M    I  NV+ +N LIDG+C     D+A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++F  +   G  P V T+  ++R     G  + A  L   M + G+ P  + Y  LID+
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
           F +        +++ LMQ++  S D+    V+IH L     +++ASK FN++ E K+EP+
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635

Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
            V YN MI GYC       A R+   +      PN  + +  I VLC++     A  + +
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695

Query: 550 QMLKLGLKPSVSLYNIL 566
            M + G KP+   Y  L
Sbjct: 696 IMAEKGSKPNAVTYGCL 712



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 231/461 (50%), Gaps = 12/461 (2%)

Query: 66  AQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQA 125
           + T+ + + SG + ++S   + +LC        S N VT    Y  +I    +     +A
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQ-----GISPNVVT----YTILIKGLCQDGRIYEA 410

Query: 126 LFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKG 184
              + Q+L  G+ P   T++SL+    K  +   G+  + +  +     DV  +G+L+ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470

Query: 185 CCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT 244
             + G +  A     ++       NVV++ SLIDG C+    + A  +FR +G  G+   
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530

Query: 245 QHTY-TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
             T+ TV+   + +  L++  F F+   ++ G+ P    Y  LI  +C   K + G +LF
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D M+  +++ ++   N +I  L K  R+++A +  + +    + P+++TYN +I G+C  
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
              D+A R+F  LK     P+ VT  +LI    K  +   A  +   M E+G  P+ VTY
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
             L+D F +S D+E +F+++  MQ+ G SP + +Y ++I GLC +G + EA+ +F+   +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769

Query: 484 TKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            KL P+ V Y ++I GYCK G    A  L   M   G+ P+
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 231/497 (46%), Gaps = 40/497 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID + K+ +       F Q L  GV+     F+S +   +KS       + +    
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           C+ +  +V ++ ILIKG C+ G + +AF +  Q+ + G  P++V Y+SLIDG CK G++ 
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               L+  + ++G       Y VL+ GL K GL      F  KM    +  ++  +N LI
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   +  E  K+F  M    +  +V T+ T++     E R++EA  L  +M   G+ 
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563

Query: 348 PNVITYNKLIDGFC------------DAGETDK-----------------------AFRL 372
           P+ + Y  LID FC            D  + +K                       A + 
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           FN L      P +VTYN +I  +        A  +   ++     P+ VT TILI    +
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           ++DM+ A  M+S+M + G  P+  TYG L+       +++ + KLF  M E  + P+ V 
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y+++I G CK G    A  +  +  +  L+P++ +Y+  I   C+ G+  EA +L   ML
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803

Query: 553 KLGLKPSVSLYNILYRA 569
           + G+KP     ++L RA
Sbjct: 804 RNGVKPD----DLLQRA 816



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 192/373 (51%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +L+ + + G +PNVV + +LI+G CK G+++RA  LF+ + + G+      Y+ LI 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           G FK G+   G + + +    GV   +  ++  I  Y   G ++    ++  M  + ++ 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           NVVTY  LI GLC++ R+ EA  +  Q+   G+ P+++TY+ LIDGFC  G     F L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +   G  P VV Y VL+   SK G    A     +M  + I  + V +  LID + R 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
           +  ++A +++ LM   G  PDV T+  ++    M+G ++EA  LF  M++  LEP+ + Y
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I  +CK       L+L   M    +  +IA  +  I +L +  +  +A    N +++
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 554 LGLKPSVSLYNIL 566
             ++P +  YN +
Sbjct: 630 GKMEPDIVTYNTM 642



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 230/499 (46%), Gaps = 59/499 (11%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE---NRCK--------- 170
           + AL YF     SG  P   +F ++   +I++  FD     F E   NR K         
Sbjct: 84  NSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140

Query: 171 ---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSL---------- 216
              ++ DV  F  L++ CC  G ++KA E+     ++G   P   +Y  L          
Sbjct: 141 DRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198

Query: 217 -----IDGCCKNGDIERAKM---------LFRKIGELGLVATQHTYT--------VLICG 254
                 D  C+ G IE + +         LF K GE+      H           ++ C 
Sbjct: 199 LIADHFDKLCRGG-IEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCN 256

Query: 255 LFKNGLQKDGFEFYEKM---QLN-GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
               GL  D  E   ++    L+ G +P++ T+  LI+ +C  G++   F LF  M  R 
Sbjct: 257 KVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           +  +++ Y+TLI G  K   +    +L  Q    G+  +V+ ++  ID +  +G+   A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
            ++ ++   G SP+VVTY +LI+   + G    A  +  ++ +RG+ PS VTY+ LID F
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
            +  ++   F +Y  M K G+ PDV  YGVL+ GL  +G M  A +    M    +  N 
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
           VV+N +I G+C+      AL++   M   G+ P++A++++ + V   +G+  EA  L  +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556

Query: 551 MLKLGLKPSVSLYNILYRA 569
           M K+GL+P    Y  L  A
Sbjct: 557 MFKMGLEPDALAYCTLIDA 575


>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 369

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 200/368 (54%), Gaps = 1/368 (0%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           CE+GD++ A  V   + +   SP+ V+Y ++++G  + G I+    L+  +G  G  +  
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVA 60

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            ++ +++ GLF NG   +    +E M+  G      TY  L+H +C  G +++  ++ + 
Sbjct: 61  -SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
              +    +   Y+ +I GLCKE ++++A  +L+ M  +G  PN   YN LI+G   A +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           ++ A R+F ++     SP++VTYN+LI    K+     A DLV+EM E+G+TPS +TY++
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        +E A ++++ + K+GF PDV  +  LIHGLC  G  + A  L+  M    
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWN 299

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             PN V  N ++ G+ K+G+   AL +   + +  L P+I SY+ T+  LC   +  +A 
Sbjct: 300 CAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAI 359

Query: 546 VLLNQMLK 553
           + LN  ++
Sbjct: 360 LFLNDAVR 367



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 182/349 (52%), Gaps = 1/349 (0%)

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++GDI+ A+ +++ I +  +      Y  ++ G ++ G  KD FE +E M   G + S+
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSV 59

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            ++N ++    + G+V E   +++ M+      + +TY  L+ G CK   + ++ R+L+ 
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            +  G   +   Y+ +I+G C   + +KA  + N +  +G  P+   YN LI     A  
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           S+ A  + REM     +P+ VTY ILI+   +S+   +A+++   M + G +P V TY +
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ GLC+   ++ A +L+N + +   +P+  ++N +I G C  G +  AL L  +MN   
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWN 299

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             PN+ + ++ +    +DG    A V+  ++LK  L+P +  YNI  + 
Sbjct: 300 CAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKG 348



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 171/358 (47%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           D A   +  ++DS V P +  +N++L    ++      +  +     +    V SF I++
Sbjct: 7   DGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVASFNIMM 66

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           +G  + G +++   +   +++ G+  + + Y  L+ G CKNG I ++  +       G V
Sbjct: 67  RGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGV 126

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                Y+ +I GL K    +        M  +G  P+ + YN LI+      K  +  ++
Sbjct: 127 LDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRV 186

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM     +  +VTYN LI GLCK  R  EA  L+ +M   G++P+VITY+ L+ G C 
Sbjct: 187 FREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCL 246

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             + + A +L+NQ+  NG  P V  +N LI      G +++A  L  +M      P+ VT
Sbjct: 247 GHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVT 306

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
              L++ F +  DM  A  +++ + K+   PD+ +Y + + GLC    + +A    N 
Sbjct: 307 QNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLND 364


>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
 gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
          Length = 900

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 236/504 (46%), Gaps = 36/504 (7%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           P    R +  +I  + K      A   F  M   G+ P +  F SL+     +       
Sbjct: 259 PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGAL 318

Query: 162 LFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
               E + + +EL + ++ ILI G  +  D   A  +  + +    S N +IY+++I   
Sbjct: 319 SCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAH 378

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++G++ERA+ L  ++ E G+ A    Y  ++ G      +      +E+++  G  PS+
Sbjct: 379 CQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 438

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            +Y CL++ Y   GKV++   +  EM    +  N  TY+ LI G         A  + ++
Sbjct: 439 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 498

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKA------------------FR----------- 371
           M  +G+ P+   YN LI+ FC  G  D+A                  FR           
Sbjct: 499 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 558

Query: 372 ------LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
                   + ++ +G  P+V+TYN LI    +    + A  ++ +M   GITP+E TYTI
Sbjct: 559 MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 618

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           ++  +  S D+ KAFE ++ +++SG   DVY Y  L+   C  G M+ A  +   M   K
Sbjct: 619 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 678

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
           +  N  +YN++I G+ + G+ + A  L+ +M E G+ PNI +Y+S I   C+ G    AE
Sbjct: 679 IPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAE 738

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            ++ +M+ +GLKP+V  Y  L + 
Sbjct: 739 KVIEEMVDVGLKPNVKTYTTLIKG 762



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 1/429 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y +II AH +S   ++A     +M + G+    + ++S++       + +K  + F   
Sbjct: 370 IYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL 429

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             C  +  + S+G L+    + G + KA  +  ++E  G   N   Y+ LI+G     D 
Sbjct: 430 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDF 489

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  +F ++   GL   +  Y +LI    K G         EKMQ   + PS   +  +
Sbjct: 490 ANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 549

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I  Y   G +       D MR       V+TYN LI GL ++ +VQ A  +LD+M +AGI
Sbjct: 550 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGI 609

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  
Sbjct: 610 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 669

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I+  C
Sbjct: 670 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 729

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G+M+ A K+   M +  L+PN   Y  +I G+ +     RAL+   EM   GL P+ A
Sbjct: 730 KAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEA 789

Query: 527 SYSSTIGVL 535
           SY   +  L
Sbjct: 790 SYHCLVTSL 798



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +++ ++K     +AL    +M   G++  + T++ L+   I    F   +  F E  
Sbjct: 441 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 500

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 501 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 560

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G V T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 561 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 621 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 680

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 681 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 740

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + R    ++A + +  M+ +G  PD  +Y  L+  L  
Sbjct: 741 IEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 800

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 801 RATVMEGS 808



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%)

Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
           ER   PS   + ++I  + +  D   A   +  M+  G  P+ + +  L+H   +  +M+
Sbjct: 256 ERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 315

Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
            A      M    LE   V Y+++I G+ K  +S  A  L  E   K    N   YS+ I
Sbjct: 316 GALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNII 375

Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              CQ G    AE L+ +M + G+   + +Y+
Sbjct: 376 HAHCQSGNMERAEELVCEMEEDGIDAPIDVYH 407


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 180/356 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+Y F  LI    E+G L  A E      E  F         +++   K    +     +
Sbjct: 69  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFY 128

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           ++I E G  A+ + + +L+    K G  +     ++ +   G+ PS+ ++N L++ Y   
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRL 188

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + EGF+L   M    V  +V TY+ LI GLCKE ++ +A  L D+M   G+ PN +T+
Sbjct: 189 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 248

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G  D A  ++ Q+ S   SP ++TYN LI    K G+ K A DL+ EM  
Sbjct: 249 TTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRM 308

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P +++YT LID   +  D+E AFE    M +     D   Y  LI GLC +G   +
Sbjct: 309 KGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSID 368

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           A K+   M    L P+   Y M+I  +CK+G+ +   +LL EM   G VP++ +Y+
Sbjct: 369 AEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYN 424



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 6/303 (1%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ E G+  ++  +  L+   CK GDI  A  +F  I + GL  +  ++  L+ G  + G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +GF     M  +GV P +YTY+ LI+  C E K+ +  +LFDEM  + +  N VT+ 
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK  RV  A  +  QM    +SP++ITYN LI G C  G+  +A  L ++++  
Sbjct: 250 TLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV---RSDDM 436
           G  P  ++Y  LI    K G+ + A +  + M +  I   +V YT LI       RS D 
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           EK   M   M   G  PD  TY ++I+  C KG++   SKL   M      P+ V YN++
Sbjct: 370 EK---MLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 426

Query: 497 IFG 499
           + G
Sbjct: 427 MNG 429



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 134/254 (52%)

Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
           V SF  L+ G    GDL++ F + + +   G  P+V  Y+ LI+G CK   ++ A  LF 
Sbjct: 175 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 234

Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
           ++ + GLV    T+T LI G  KNG      E Y++M    +SP L TYN LI+  C +G
Sbjct: 235 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKG 294

Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
            + +   L DEMR + +  + ++Y TLI G CKE  ++ A     +M    I  + + Y 
Sbjct: 295 DLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYT 354

Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
            LI G C  G +  A ++  ++ S G  P   TY ++I  F K G+    S L++EM+  
Sbjct: 355 ALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRD 414

Query: 415 GITPSEVTYTILID 428
           G  PS VTY +L++
Sbjct: 415 GHVPSVVTYNVLMN 428



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 36/271 (13%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIK 183
           AL  F  +   G+RP   +FN+L+   I+    D+G+   S  +   V+ DVY++ +LI 
Sbjct: 159 ALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 218

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG------------------- 224
           G C+   ++ A E+ +++ + G  PN V +T+LIDG CKNG                   
Sbjct: 219 GLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSP 278

Query: 225 ----------------DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
                           D+++A+ L  ++   GL   + +YT LI G  K G  +  FE  
Sbjct: 279 DLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHR 338

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
           ++M    +      Y  LI   C EG+  +  K+  EM    +  +  TY  +I   CK+
Sbjct: 339 KRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKK 398

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             V    +LL +M+  G  P+V+TYN L++G
Sbjct: 399 GDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 97/192 (50%), Gaps = 1/192 (0%)

Query: 376 LKSNG-QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           L++ G Q   +  ++ LI A+ ++G  + A +  R   E        T   +++  ++  
Sbjct: 60  LETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 119

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
             +  +  Y  + + G+   +Y + +L+H  C +G+++ A  +F+++ +  L P+ V +N
Sbjct: 120 YFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFN 179

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
            ++ GY + G+     RL   M+  G+ P++ +YS  I  LC++ K  +A  L ++ML  
Sbjct: 180 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 239

Query: 555 GLKPSVSLYNIL 566
           GL P+   +  L
Sbjct: 240 GLVPNGVTFTTL 251


>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 376

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 203/374 (54%), Gaps = 1/374 (0%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           CE+GD++ A  V   + +   SP+ V+Y ++++G  + G I+    L+  +G+ G  +  
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRSVA 60

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            ++ +++ GLF NG   +    +E M+  G      TY  L+H +C  G +++   L + 
Sbjct: 61  -SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
              +    + + Y  +I GLCKE ++++A  +L+ M  +G  PN   YN LI+G   A +
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
           ++ A R+F ++     SP++VTY++LI    K+     A DLV+EM E+G+TPS +TY++
Sbjct: 180 SEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSL 239

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+        +E A ++++ + K GF PDV  + +LIHGLC     + A  L+  M    
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWN 299

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             PN V +N ++ G+ K+G+   AL +   + +  L P+I SY+ T+  LC   +  +A 
Sbjct: 300 CSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAI 359

Query: 546 VLLNQMLKLGLKPS 559
           + L+  ++  + P+
Sbjct: 360 LFLHDAVRKKIFPT 373



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           C++GDI+ A+ +++ I +  +      Y  ++ G ++ G  KD FE +E M   G S S+
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEG-SRSV 59

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
            ++N ++    + G+V E   +++ M+      + +TY  L+ G CK   + ++  LL+ 
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
            +  G   + + Y  +I+G C   + +KA  + N +  +G  P+   YN LI     A  
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
           S+ A  + REM     +P+ VTY+ILI+   +S+   +A+++   M + G +P V TY +
Sbjct: 180 SEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSL 239

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
           L+ GLC+   ++ A +L+N + +   +P+  ++N++I G C    +  AL L  +MN   
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWN 299

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             PN+ ++++ +    +DG    A V+  ++LK  L+P +  YNI  + 
Sbjct: 300 CSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKG 348



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 173/369 (46%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
           D A   +  ++DS V P +  +N++L    ++      +  +     +    V SF I++
Sbjct: 7   DGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRSVASFNIMM 66

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
           +G  + G +++   +   +++ G+  + + Y  L+ G CKNG I ++  L       G  
Sbjct: 67  RGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRX 126

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
                Y  +I GL K    +        M  +G  P+ + YN LI+      K  +  ++
Sbjct: 127 XDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRV 186

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F EM     +  +VTY+ LI GLCK  R  EA  L+ +M   G++P+VITY+ L+ G C 
Sbjct: 187 FREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCL 246

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
             + + A +L+NQ+   G  P V  +N+LI        ++ A  L  +M     +P+ VT
Sbjct: 247 GHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVT 306

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           +  L++ F +  D+  A  M++ + K+   PD+ +Y + + GLC    + +A    +   
Sbjct: 307 HNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAV 366

Query: 483 ETKLEPNDV 491
             K+ P  +
Sbjct: 367 RKKIFPTKI 375



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 126/249 (50%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +I G C+   L KA  VLN + + G  PN  +Y +LI+G       E A  +F
Sbjct: 128 DALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVF 187

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           R++G      T  TY++LI GL K+    + ++  ++M   G++PS+ TY+ L+   C  
Sbjct: 188 REMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLG 247

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            KV    +L++++  +    +V  +N LI GLC   + Q A  L   M     SPN++T+
Sbjct: 248 HKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTH 307

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L++GF   G+   A  ++ ++  N   P +++YN+ ++          A   + +   
Sbjct: 308 NTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVR 367

Query: 414 RGITPSEVT 422
           + I P+++T
Sbjct: 368 KKIFPTKIT 376


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 185/378 (48%), Gaps = 9/378 (2%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           GDL+ A  ++   E     P+  +   L+   C+ G  + A+   R +G  G  AT   Y
Sbjct: 85  GDLDAALRLV---ESSPRPPDAALANRLVRDLCRRGRPDDAE---RVVGACGPAATVVAY 138

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             L  G  + G   D       M    V P+ YTYN LIH  C  G+V +   + D+M  
Sbjct: 139 GALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLC 195

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           R  A +VVTYN L+   CK    ++A  L+D M+  G +PN +TYN L+DG C  G+ D 
Sbjct: 196 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDD 255

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A  L   L S+G  PS V YN +++    A     A +LV EM      P+E T+ ++I 
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
           S  R   +++A ++   M K G + ++ TY  +I+GLC + N+  A  L + M     +P
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + V YN ++ G C       A  L+  M + G +P+  ++++ IG LCQ G   +A  + 
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435

Query: 549 NQMLKLGLKPSVSLYNIL 566
            QM   G  P+   Y+ +
Sbjct: 436 KQMPDKGCTPNSITYSTI 453



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 207/413 (50%), Gaps = 2/413 (0%)

Query: 137 VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAF 195
           V+P + T+N L+  + +            +  C+    DV ++ IL++  C+     +A 
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
           E+++ +   G +PN V Y  L+DG C  GD++ A  L R +   G   +   Y  ++ GL
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
                  D  E   +M      P+  T+N +I+  C +G + +  +L ++M       N+
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           VTYN +I GLC++  V  A  LL +MK  G  P+++TYN L+ G C A +   A  L + 
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +  NG  P  VT+N LI    + G    A ++ ++M ++G TP+ +TY+ +I    ++  
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +++A E+++ M   GF+PD   Y +L   L     ++EA +    + ++ + P+ V+YN 
Sbjct: 463 LDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           ++ G C+ G +  A+ ++  M   G +P+  +Y   I  L  +G   EA  LL
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 190/396 (47%), Gaps = 1/396 (0%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           V+ + Y++  LI   CE G +  A  VL+ +   G +P+VV Y  L++  CK     +A 
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            L   +   G      TY VL+ G+   G   D  E    +  +G  PS   YN ++   
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
           C+  +  +  +L  EM       N  T+N +I  LC++  +Q+A +LL++M   G + N+
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
           +TYN +I+G C+    D A  L +++KS G  P +VTYN L++    A     A +L+  
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
           M + G  P  VT+  LI    +   M  A E++  M   G +P+  TY  +I GL     
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462

Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
           + +A +LFN M      P D +Y ++      +     A++ + ++ + G+ P+   Y++
Sbjct: 463 LDQALELFNEMGHKGFNP-DKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +  LC++GK   A  ++  M+  G  P    Y IL
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 557



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 187/392 (47%), Gaps = 7/392 (1%)

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           L++  C  G  + A  V+      G +  VV Y +L DG C+ G +  A+   R +G + 
Sbjct: 109 LVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDAR---RVVGGMP 162

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +    +TY  LI  L + G  +D     + M   G +P + TYN L+   C      +  
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L D MR      N VTYN L+ G+C E  V +A  LL  +   G  P+ + YN ++ G 
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C A     A  L  ++      P+  T+NV+I +  + G  + A  L+ +M + G T + 
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VTY  +I+      +++ A  + S M+  G  PD+ TY  L+ GLC      +A +L ++
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M +    P++V +N +I   C++G    A+ +  +M +KG  PN  +YS+ I  L +  K
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
             +A  L N+M   G  P   +Y +L    N+
Sbjct: 463 LDQALELFNEMGHKGFNPD-KIYQLLAECLND 493



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 180/409 (44%), Gaps = 40/409 (9%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILI 182
            AL     ML  G  P   T+N LL    K   + +        R +    +  ++ +L+
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244

Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
            G C  GD++ A E+L  L   G  P+ V Y +++ G C       A  L  ++      
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
             + T+ V+I  L + GL +   +  EKM  +G + ++ TYN +I+  C +  V     L
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             +M+      ++VTYNTL+ GLC   +  +AE L+D M   G  P+ +T+N LI   C 
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL--------------- 407
            G    A  +F Q+   G +P+ +TY+ +I   +KA     A +L               
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIY 484

Query: 408 -------------------VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
                              VR++++ GI+P  V Y  ++    R+   E A ++ + M  
Sbjct: 485 QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVS 544

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           SG  PD  TY +LI GL  +G + EA +L       KL   DV+ N +I
Sbjct: 545 SGCMPDDLTYVILIEGLAYEGYLNEARELL-----IKLCSRDVLVNSLI 588


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y SI+D + K  L ++A+    +M+   + P    + +L+    K+         F E 
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + +E + +     +     +G + +A E+   +   G  P+ V YTS++DG  K G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  + +++ E         Y VLI GLFK G + +   F+  M+  G++P   T+N +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNTM 442

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC EG +    KL +EM+   +  N +T N L+  LC    +++   LL+ M + G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P   T+  ++D    +   D    + +QL   G    + TYN LI  F + G  + A+ 
Sbjct: 503 HPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATL 562

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + ++M  +GI    +TY  LI  +  S  ++KAF ++S M   G SP+V TY +L+ GL 
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS 622

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               +KEA+ L N M E  L PN   Y++++ G+ K GN    ++L  EM  KG VP   
Sbjct: 623 AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR 682

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  I    +  K  +A+ L+ +M   G+ P+ S Y+IL
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 211/466 (45%), Gaps = 71/466 (15%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------------- 218
           D+ ++  L+ G C+ GDL  A +++ ++  +   PNV+ YT+LID               
Sbjct: 51  DIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMY 110

Query: 219 --------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                               G CK+G +E AK +FR++ E+G+V  + +Y  LI  LFK 
Sbjct: 111 DEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE 170

Query: 259 GLQKDGFEFYEKMQLNGVS-----------------------------------PSLYTY 283
           G   + F    +M + G+                                    P+  TY
Sbjct: 171 GNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + LI  +C  G V++G  L  EM  + +  NV+ Y++++ G  K+  + EA  ++ +M  
Sbjct: 231 SALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             I PNV  Y  LIDG+  A +   A  LF ++KS G   +    +  +    ++G  + 
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L ++M  RG+ P  V YT ++D F ++     AF +   M +     DV  Y VLI+
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL   G   E+      M +  L P+   +N MI  YCKEGN   AL+LL EM   GL P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N  + +  +  LC  G+  +   LLN ML +G  P+ + +  +  A
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 212/466 (45%), Gaps = 69/466 (14%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++   V  F +LI G C  G++++A E+L  ++  G +P++V Y +L++G CK GD+  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K L  +I  + L     TYT LI    K+   +D    Y++M +  + P + TY C+++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-- 347
            C  GKV E   +F EM    V  N  +Y TLI  L KE  V EA  L  +M + GI   
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 348 ---------------------------------PNVITYNKLIDGFCDAGETDKAFRLFN 374
                                            PN +TY+ LIDG C  G+ +K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++     P+V+ Y+ ++  ++K G    A D++R+M +R I P+   Y  LID + ++D
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
               A +++  M+  G   + +     ++ L   G M+EA +LF  M    L P+ V Y 
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEK----------------------------------G 520
            M+ G+ K G    A  +  EM EK                                  G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L P+ A++++ I   C++G    A  LLN+M   GLKP+    NIL
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 229/467 (49%), Gaps = 2/467 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++D   K+ +++ A   F  +L+  + P   T+++L+    K    +KG L   E 
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  +V  +  ++ G  + G LN+A +V+ ++ +    PNV +Y +LIDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  LF+++   GL          +  L ++G  ++  E ++ M   G+ P    Y  +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  +   GK S+ F +  EM  +    +VV YN LI GL K +   E+E     M+  G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK-LGKYESESFHTGMRQLGL 432

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+  T+N +I+ +C  G    A +L N++KS G  P+ +T N+L++    AG  +   D
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ +M   G  P+  T+  ++D+  +S   +    M+  +   G   D+ TY  LI   C
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++ A+ +F  M    +  + + YN +I GYC   +  +A  +  +M  +G+ PN+ 
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +Y+  +G L       EA  L+NQM + GL P+ + Y+IL      I
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 195/445 (43%), Gaps = 23/445 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+     A     +M +         +N L+  + K   ++         +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +  D  +F  +I   C+ G+L  A ++LN+++  G  PN +    L+   C  G+IE+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L   +  +G   T  T+  ++    K+         ++++   GV   L TYN LI 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C  G +     +F +M  + +  +++TYN LI G C    +++A  +  QM   G+SP
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TYN L+ G   A    +A  L NQ+K  G  P+  TY++L+    K GN K    L 
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  +G  P   TY +LI  F +   M +A E+   MQ  G  P+  TY +LI G    
Sbjct: 670 CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
               E +K     ++ +                       A RL  EMNEKG +P   + 
Sbjct: 730 SKQPELNKSLKRSYQAE-----------------------AKRLFEEMNEKGFIPCENTL 766

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLK 553
           +     L + GK  +A+ +LN++ K
Sbjct: 767 ACISFTLAKPGKKADAQRILNKLYK 791



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%)

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           LN  +      +V  +  LIDG C+NG+I RA  L   +   G      TY  L+ G  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G      +   ++ L  + P++ TY  LI  YC    + +   ++DEM  + +  +VVT
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  ++ GLCK  +V+EA+ +  +M+  G+ PN  +Y  LID     G   +AF L  ++ 
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    VV Y  L+    KAG +  A D+ + + E  + P+ VTY+ LID   +  D+ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           K   +   M++    P+V  Y  ++ G   KG + EA  +   M +  + PN  VY  +I
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY K      AL L  EM  +GL  N     S +  L + G+  EA+ L   M+  GL 
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 558 PS 559
           P 
Sbjct: 365 PD 366



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +H E+  +V  +N LI G C+   +  A  LL+ MK  G +P+++TYN L++GFC  G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAF------------------------------- 395
             A +L  ++      P+V+TY  LI A+                               
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 396 ----SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
                K+G  + A  + REMEE G+ P+  +Y  LIDS  +  ++ +AF +   M   G 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             DV  Y  L+ GL   G    A  +F  + E  L PN V Y+ +I G+CK G+  +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LL EM EK + PN+  YSS +    + G   EA  ++ +M++  + P+V +Y  L
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 120/231 (51%)

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R L+  +   I  +V  +N LIDG+C  GE  +A  L   +K+ G +P +VTYN L+  F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G+   A  L+ E+    + P+ +TYT LID++ +S  +E A  MY  M      PDV
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  +++GLC  G ++EA  +F  M E  + PN   Y  +I    KEGN   A  L G 
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  +G+  ++  Y++ +  L + G    AE +   +L+  L P+   Y+ L
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N++I GYC+ G   RA+ LL  M  +G  P+I +Y++ +   C+ G    A+ L+ ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 553 KLGLKPSVSLYNILYRA 569
            + L+P+V  Y  L  A
Sbjct: 80  LVNLEPNVITYTTLIDA 96


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 229/460 (49%), Gaps = 10/460 (2%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +ID   ++   D+A +YF +M  + + P + T+  ++  ++K+    +      E     
Sbjct: 198 LIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVPT 256

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
              + ++  +I G C+AGD+ KA+ +L  ++  G+  + + Y +LI G C+  +I+RA  
Sbjct: 257 ---LANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYE 313

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQ-LNGVSPSLYTYNCLIHEY 290
           L  ++     V    TY +LI GL +     +  +    ++  +  +P++ +YN LI  +
Sbjct: 314 LLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGF 373

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
               +V++ ++LF EM       +VVTY+TLI GLC   R  EA   L++M    I P V
Sbjct: 374 SKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKV 433

Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
             Y+ +I G C AGE D A  +F+ + +NG  P++  YN LI    K G    A   V+E
Sbjct: 434 PVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKE 493

Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL-CMKG 469
           M ERG +P  VTY  LI    R    ++A ++Y    + G      +  V+I  L C   
Sbjct: 494 MTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC--- 550

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +++A ++   +  T   P    Y  +I   CKE N   A +LL +M   G+ P+ ++  
Sbjct: 551 -LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVD 609

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           + +G +C+  K   A   L +M++LG KPSV  Y+ L  A
Sbjct: 610 ALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNA 649



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 227/467 (48%), Gaps = 47/467 (10%)

Query: 138 RPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAF 195
           R   +T+N     +I++   ++ +  F E +   EL  D  ++GILI+G C  G L  A 
Sbjct: 87  RHTVHTYNCFYEALIRTGQCEEAYRLFKE-KWPQELIPDSITYGILIRGLCNFGKLKLAC 145

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            +  ++ + G  P V+    L++  CK+G++E A   F K+  +   AT   +T+LI GL
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAAT---WTILIDGL 202

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F+     +   ++E+M+   + P+ +TY  +I+     GKV+E  ++  EM    +A   
Sbjct: 203 FRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLA--- 258

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
             Y ++I G CK   + +A  LL+ MK  G   + +TYN LI G C   E D+A+ L  +
Sbjct: 259 -NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME-ERGITPSEVTYTILIDSFVRSD 434
           +KSN   P + TY++LI    +A     A DL+  +  E   TP+ V+Y  LID F ++ 
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA-------------------- 474
            +  A++++  M  +G  PDV TY  LI GLC  G   EA                    
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437

Query: 475 ---------------SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
                          S +F+SM     +PN  VYN +I+G CK G    A   + EM E+
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           G  P+  +Y + I  LC+  +  EA  L  + L+ G++ S +  N++
Sbjct: 498 GCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVV 544



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 207/453 (45%), Gaps = 40/453 (8%)

Query: 102 PVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           PV     Y S+I  H K+    +A      M   G +  + T+N+L+    +    D+ +
Sbjct: 253 PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAY 312

Query: 162 LFFSENRCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDG 219
               E +    + D++++ ILI G C A  L++A ++L  L  E   +PNVV Y +LIDG
Sbjct: 313 ELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG 372

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
             K   +  A  LF ++   G      TY+ LI GL   G   +   + E+M    + P 
Sbjct: 373 FSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPK 432

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           +  Y+ +I   C  G++     +FD M       N+  YN+LI GLCK  R+ +A+  + 
Sbjct: 433 VPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVK 492

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           +M   G SP+ +TY  LI G C    TD+A  L+                          
Sbjct: 493 EMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY-------------------------- 526

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
                   VR +E+ GI  SE +  ++I S      +E+A  +  ++  +G SP  + Y 
Sbjct: 527 --------VRSLEQ-GIEISETSCNVVIASL---RCLEQAQRVLRVVLATGNSPTAFFYA 574

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            +I  LC + N+ EA +L   M    ++P+    + ++   C++  +  A+  L EM   
Sbjct: 575 TVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRL 634

Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           G  P++ +YS+ +  L + GK  EA V+L +++
Sbjct: 635 GSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 190/423 (44%), Gaps = 35/423 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++ID   K+   + A   F +M+ +G  P   T+++L+  +  +    +   +  E  
Sbjct: 366 YNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMV 425

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K  L  V  +  +I G C AG+L+ A  V + +   G  PN+ +Y SLI G CK G + 
Sbjct: 426 GKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLC 485

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY------------------- 268
            AK+  +++ E G      TY  LI GL +     +  + Y                   
Sbjct: 486 DAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI 545

Query: 269 ------EKMQ-------LNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
                 E+ Q         G SP+ + Y  +I   C E  ++E  +L ++M    +  + 
Sbjct: 546 ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDG 605

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            T + L+  +C++ +   A   L++M   G  P+V TY+ L++    AG+  +A  +  +
Sbjct: 606 STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRR 665

Query: 376 LKSNGQS-PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           L S+    P  + Y  LI A+S     + A ++++E++ +    S V Y  L+    R+ 
Sbjct: 666 LISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTR 725

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
           +++  +E+   M+++ F  +  T+ +LI G C  G    A ++ + M +  L P+  +  
Sbjct: 726 NLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIK 784

Query: 495 MMI 497
            ++
Sbjct: 785 FLV 787



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 146/376 (38%), Gaps = 74/376 (19%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS---CSFDKGW 161
           K  +Y S+I    ++   D A   F  M+ +G +P    +NSL+  + K+   C      
Sbjct: 432 KVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRV 491

Query: 162 LFFSENRCKVELDVYSFGILIKGCC------EAGDL------------------------ 191
              +E  C    D  ++G LI G C      EA DL                        
Sbjct: 492 KEMTERGCSP--DGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLR 549

Query: 192 --NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
              +A  VL  +   G SP    Y ++I+  CK  ++  A+ L   +   G+     T  
Sbjct: 550 CLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVD 609

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL----------------------- 286
            L+  + +         F E+M   G  PS+ TY+ L                       
Sbjct: 610 ALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISH 669

Query: 287 -------------IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
                        I  Y N+ +V E   +  E++ +    ++V YNTL+ GL +   +Q 
Sbjct: 670 TSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQM 729

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
              LL +MK      N  T+N LI GFC  G+TD+A R+ +++K    +PS      L+ 
Sbjct: 730 VYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIKFLVD 788

Query: 394 AFSKAGNSKMASDLVR 409
             ++A   + + DLV+
Sbjct: 789 ELARAEREQESKDLVK 804



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           +  F   V+TY      L   G  +EA +LF   W  +L P+ + Y ++I G C  G   
Sbjct: 83  RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            A  L  EM ++GL P + +    +  LC+ G     E+ L    K+   P  + + IL
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNL---ELALRYFEKMSSIPCAATWTIL 198


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 210/446 (47%), Gaps = 5/446 (1%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGI 180
           +D+AL     M   G  P +  + +++  +       +     +E        DV +F  
Sbjct: 175 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 234

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           +++G C  G + +A  +++++   G  P V+ Y  L+ G C+    + A+ +  ++ EL 
Sbjct: 235 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 294

Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
           +V     +  +I G    G   +  E YE M L G  P  +TY+ L+H  C  G++    
Sbjct: 295 VV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
           +L  EM  +  A NVVTY  ++   CK     +   LL++M   G++ N   YN +I   
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G  D+A  L  +++S G +P + +YN +I         + A  +   + E G+  + 
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           +TY  +I + +R    + A  +   M   G S DV +Y  LI  +C  GN+  +  L   
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           M E  ++PN+V YN++I   CKE     AL L  +M  +GL P+I +Y++ I  LC+ G 
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
              A  LL ++    + P +  YNIL
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNIL 616



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 4/400 (1%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           +R +V    ++FG+  +  C  G  ++A  +L  +   G  P+ V+Y ++I   C  G +
Sbjct: 151 HRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGV 210

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  L  ++  +G  A  +T+  ++ G+   G  ++     ++M   G  P + TY  L
Sbjct: 211 TEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 270

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +   C   +  E   +      R    NVV +NT+I G   E ++ EA  L + M + G 
Sbjct: 271 LQGLCRVRQADEARAMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 326

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+  TY+ L+ G C  G    A RL  +++  G +P+VVTY +++ +F K G       
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ EM  +G+T +   Y  +I +  +   M++A  +   M+  G +PD+ +Y  +I+ LC
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               M+EA  +F ++ E  +  N + YN +I    ++G    A+RL  EM   G   ++ 
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           SY+  I  +C+DG    + VLL +M + G+KP+   YNIL
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 546



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 186/379 (49%), Gaps = 3/379 (0%)

Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
           +A     +M+  G  P   T+  LL  + +    D+            EL+V  F  +I 
Sbjct: 247 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR---VPELNVVLFNTVIG 303

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
           GC   G L +A E+   +   G  P+   Y+ L+ G CK G I  A  L R++ + G   
Sbjct: 304 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 363

Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
              TYT+++    KNG+  D     E+M   G++ +   YN +I+  C +G++ E   L 
Sbjct: 364 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 423

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
            EMR +    ++ +YNT+I  LC   +++EAE + + +   G+  N ITYN +I      
Sbjct: 424 QEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRD 483

Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
           G    A RL  ++  +G S  VV+YN LI+A  K GN   +  L+ EM E+GI P+ V+Y
Sbjct: 484 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 543

Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
            ILI    +   +  A E+   M   G +PD+ TY  LI+GLC  G M  A  L   +  
Sbjct: 544 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN 603

Query: 484 TKLEPNDVVYNMMIFGYCK 502
             + P+ + YN++I  +CK
Sbjct: 604 ENVHPDIITYNILISWHCK 622



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 224/451 (49%), Gaps = 5/451 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  + LY+++I A        +A    ++ML  G     NTF+ ++  +       +   
Sbjct: 191 VPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR 250

Query: 163 FFSENRCKVELD-VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
                  K  +  V ++G L++G C     ++A  +L ++ E+    NVV++ ++I GC 
Sbjct: 251 LVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCL 306

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G +  A  L+  +G  G     HTY++L+ GL K G          +M+  G +P++ 
Sbjct: 307 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           TY  ++H +C  G   +   L +EM  + +  N   YN +I  LCK+ R+ EA  L+ +M
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
           +  G +P++ +YN +I   C+  + ++A  +F  L   G   + +TYN +I A  + G  
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 486

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  L +EM   G +   V+Y  LI +  +  +++++  +   M + G  P+  +Y +L
Sbjct: 487 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 546

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I  LC +  +++A +L   M    L P+ V YN +I G CK G  + AL LL +++ + +
Sbjct: 547 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 606

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
            P+I +Y+  I   C+     +A +LLN+ +
Sbjct: 607 HPDIITYNILISWHCKVRLLDDAAMLLNRAM 637



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 25/283 (8%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S+ Y  +I A  K    D+A+    +M   G  P   ++N+++  +  +   ++    F 
Sbjct: 400 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF- 458

Query: 166 ENRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
           EN  +  V  +  ++  +I      G    A  +  ++   G S +VV Y  LI   CK+
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 518

Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
           G+++R+ +L  ++ E G+     +Y +LI  L K    +D  E  ++M   G++P + TY
Sbjct: 519 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 578

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           N LI+  C  G +     L +++ +  V  +++TYN LI   CK        RLLD   M
Sbjct: 579 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK-------VRLLDDAAM 631

Query: 344 AGISPNVITYNKLIDGFCDAGE-------TDKAFRLFNQLKSN 379
                     N+ +   C  G+        DK F+L+   K +
Sbjct: 632 --------LLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGD 666


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 258/589 (43%), Gaps = 55/589 (9%)

Query: 18  SRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGR 77
           +R   L    A  LF+   RQ +    +S++     L    SS +     +L + + + R
Sbjct: 46  ARAGTLSTEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFN-R 104

Query: 78  ITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGV 137
           I      PR  L       P+          Y  ++D   ++R        F + L +G+
Sbjct: 105 ICREEARPRVAL-------PTVCT-------YNILMDCCCRTRRPTVGFALFGRFLKTGL 150

Query: 138 RPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
           +      + LL  ++  K        L        VE D  S+  ++K  CE     +A 
Sbjct: 151 KMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRAL 210

Query: 196 EVLNQL--EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           ++L+ +  +  G SPNVV Y ++I G  + G++ +A  LF ++ + G+V    TYT +I 
Sbjct: 211 DLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIID 270

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
            L K            +M  NG  P+  TYNC+IH Y   G+  E   +F EM  + +  
Sbjct: 271 ALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMP 330

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N+VT N+ +  LCK  + +EA    D M   G  PN++TY+ L+ G+   G       LF
Sbjct: 331 NIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLF 390

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           N ++ NG       +N++I A+ K G       +  +M+E+G+ P   TY I+I +F R 
Sbjct: 391 NSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRM 450

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL-EPNDVV 492
             +  A + ++ M   G  P+   Y  LI G CM GN+ +A +L + M    +  PN V 
Sbjct: 451 GRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510

Query: 493 YNMMIFGYCKEG------------------------NSY-----------RALRLLGEMN 517
           +N +I   CKEG                        NS            +A  +L  M 
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             G+ P++ SY++ I   C++G+  +  +L  +ML  G+KP+   Y I+
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 224/501 (44%), Gaps = 45/501 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-----LF 163
           Y SIIDA  K+R  D+A     QM+ +G +P   T+N +    I   S    W     +F
Sbjct: 265 YTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCM----IHGYSISGQWKETAGMF 320

Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL------- 216
                  +  ++ +    +   C+ G   +A E  + +   G  PN+V Y+ L       
Sbjct: 321 REMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATE 380

Query: 217 ----------------------------IDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
                                       ID   K G ++   ++F ++ E G++    TY
Sbjct: 381 GCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTY 440

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
            ++I    + G   D  + + +M   G+ P    Y+ LI  +C  G + +  +L  EM  
Sbjct: 441 GIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500

Query: 309 REVA-CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
           R +   N+V +N++I  LCKE RV EA  + D +   G  P+VIT+N LIDG+   G+ +
Sbjct: 501 RGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIE 560

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           KAF + + + S G  P VV+YN LI  + + G       L  EM  +G+ P+ +TY I++
Sbjct: 561 KAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIIL 620

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                      A +M   M +SG + D+ T G+++ GLC      EA  +F  +    ++
Sbjct: 621 HGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVK 680

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N  + N MI    K      A  L   ++  GLVPN ++Y   I  L ++G   EA+ +
Sbjct: 681 FNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNM 740

Query: 548 LNQMLKLGLKPSVSLYNILYR 568
            + M K G  PS  L N + R
Sbjct: 741 FSLMEKSGCAPSSRLLNYIIR 761



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 248/584 (42%), Gaps = 65/584 (11%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
           P   F+LF    + GL+      SI+L+ L        HA     ++ ++  R+      
Sbjct: 135 PTVGFALFGRFLKTGLKMDVIVASILLKCLY-------HAKRSDDVVNLLLHRMPELGVE 187

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML--DSGVRPRSN 142
           P ++          S N V K+   +S          S +AL   H M+    G  P   
Sbjct: 188 PDTI----------SYNTVVKTLCEDS---------RSQRALDLLHTMVKKSGGCSPNVV 228

Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           T+N+++  + +     K    F E   + V  DV ++  +I   C+A  ++KA  VL Q+
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQM 288

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              GF PN V Y  +I G   +G  +    +FR++   GL+    T    +  L K+G  
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           K+  EF++ M   G  P+L TY+ L+H Y  EG   +   LF+ M    +  +   +N +
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I    K   + E   +  QM+  G+ P+  TY  +I  F   G    A   FNQ+ + G 
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT------------------------ 417
            P  + Y+ LI+ F   GN   A +LV EM  RGI                         
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAH 528

Query: 418 ------------PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
                       P  +T+  LID +     +EKAF +   M  +G  PDV +Y  LI G 
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G + +   LF  M    ++P  + Y +++ G   +G +  A ++  EM E G   +I
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           ++    +G LC++    EA  +  ++  + +K ++++ N +  A
Sbjct: 649 STCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDA 692



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 5/438 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
           Y S +  H KS+   +A  +F  M   G +P   T++ LL  +  + C  D   LF S  
Sbjct: 338 YMSSLCKHGKSK---EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSME 394

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  D   F I+I    + G +++   +  Q++E G  P+   Y  +I    + G + 
Sbjct: 395 GNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLA 454

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS-PSLYTYNCL 286
            A   F ++  +GL      Y  LI G   +G      E   +M   G+  P++  +N +
Sbjct: 455 DAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSI 514

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+  C EG+V E   +FD + H     +V+T+N+LI G     ++++A  +LD M  AGI
Sbjct: 515 INSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P+V++YN LIDG+C  G  D    LF ++ S G  P+ +TY +++      G +  A  
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKK 634

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           +  EM E G T    T  I++    R++  ++A  M+  +       ++     +I  + 
Sbjct: 635 MCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMY 694

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
                +EA +LF+S+  T L PN   Y +MI    KEG+   A  +   M + G  P+  
Sbjct: 695 KVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSR 754

Query: 527 SYSSTIGVLCQDGKWPEA 544
             +  I VL + G+  +A
Sbjct: 755 LLNYIIRVLLEKGEIVKA 772



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 199/416 (47%), Gaps = 8/416 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V   R++  +IDA+ K  + D+ +  F QM + GV P + T+  ++    +         
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 163 FFSENRCKVELDVYSFGI----LIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLI 217
            F++    + + +   GI    LI+G C  G+L KA E+++++   G   PN+V + S+I
Sbjct: 459 KFNQ---MIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSII 515

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           +  CK G +  A  +F  +  +G      T+  LI G    G  +  F   + M   G+ 
Sbjct: 516 NSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIE 575

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P + +YN LI  YC  G++ +G  LF EM  + V    +TY  ++ GL  + R   A+++
Sbjct: 576 PDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
             +M  +G + ++ T   ++ G C     D+A  +F +L +     ++   N +I A  K
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYK 695

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
               + A +L   +   G+ P+  TY ++I + ++   +E+A  M+SLM+KSG +P    
Sbjct: 696 VRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
              +I  L  KG + +A      +   ++       ++++  + +EG  +  ++LL
Sbjct: 756 LNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 3/295 (1%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE-AER 336
           P++ TYN L+   C   + + GF LF       +  +V+  + L+  L    R  +    
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRA 394
           LL +M   G+ P+ I+YN ++   C+   + +A  L + +  KS G SP+VVTYN +I  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
             + G    A +L  EM ++G+ P  VTYT +ID+  ++  M+KA  +   M  +GF P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
             TY  +IHG  + G  KE + +F  M    L PN V  N  +   CK G S  A     
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            M  KG  PN+ +YS  +     +G + +   L N M   G+     ++NI+  A
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 159/364 (43%), Gaps = 36/364 (9%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P V  Y  L+D CC+     R  + F   G                   K GL+ D    
Sbjct: 117 PTVCTYNILMDCCCRT---RRPTVGFALFGRF----------------LKTGLKMD---- 153

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
                   V  +     CL H   ++  V+    L   M    V  + ++YNT++  LC+
Sbjct: 154 --------VIVASILLKCLYHAKRSDDVVN---LLLHRMPELGVEPDTISYNTVVKTLCE 202

Query: 328 EMRVQEAERLLDQM--KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
           + R Q A  LL  M  K  G SPNV+TYN +I G    GE  KA  LF+++   G  P V
Sbjct: 203 DSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDV 262

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTY  +I A  KA     A  ++R+M   G  P++VTY  +I  +  S   ++   M+  
Sbjct: 263 VTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFRE 322

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M   G  P++ T    +  LC  G  KEA++ F+SM     +PN V Y++++ GY  EG 
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382

Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
               L L   M   G+V +   ++  I    + G   E  ++  QM + G+ P    Y I
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442

Query: 566 LYRA 569
           +  A
Sbjct: 443 VIAA 446



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 3/366 (0%)

Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYS 177
           RL+D A+  F+QM+  G++P    ++SL+       +  K     SE  +R     ++  
Sbjct: 452 RLAD-AMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           F  +I   C+ G + +A ++ + +  +G  P+V+ + SLIDG    G IE+A  +   + 
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
             G+     +Y  LI G  +NG   DG   + +M   GV P+  TY  ++H   N+G+  
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTV 630

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
              K+  EM       ++ T   ++ GLC+     EA  +  ++    +  N+   N +I
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMI 690

Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
           D      + ++A  LF+ + + G  P+  TY V+I+   K G+ + A ++   ME+ G  
Sbjct: 691 DAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCA 750

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           PS      +I   +   ++ KA      +     S +  T  +L+     +G   E  KL
Sbjct: 751 PSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKL 810

Query: 478 FNSMWE 483
             + ++
Sbjct: 811 LPAKYQ 816


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 225/474 (47%), Gaps = 7/474 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQM-LDSGVRPRSNTFNSLLIFVIKSCSFDKGW 161
           V   + +  I  A+ K+ L ++A+  F +M  +   +    +FNS+L  +I+   F +  
Sbjct: 92  VVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRAL 151

Query: 162 LFFSE----NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
            F++         +  +V +F ++IK  C+ G ++ A ++   +      P+V  Y +L+
Sbjct: 152 EFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLM 211

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
           DG CK   I+ A  L  ++   G   +  T+ VLI GL K G      +  + M L G +
Sbjct: 212 DGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCA 271

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TYN LIH  C +GK+ +   L D M   +   NVVTY T+I GL K+ R  +  R+
Sbjct: 272 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARV 331

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L  M+  G   N   Y+ LI G    G++ +A +LF ++       + + Y+ +I    +
Sbjct: 332 LALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCR 391

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G    A +++ EM      P+  TY+ L+  F  + +  KA EM+  M K  F+ +   
Sbjct: 392 DGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVC 451

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM- 516
           Y VLIHGLC  G +KEA  ++  M     +P+ V Y  MI G    G    AL+L  EM 
Sbjct: 452 YSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511

Query: 517 -NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
             E    P++ +Y+  +  LC+      A  LLN ML  G  P +    I  R 
Sbjct: 512 CQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRT 565



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 166/326 (50%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           T+ ++I  + K GL  D  + +  M ++   P +YTY  L+   C   ++ E   L DEM
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +      + VT+N LI GLCK+  +    +L+D M + G +PN +TYN LI G C  G+ 
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           +KA  L +++ S+   P+VVTY  +I    K G +   + ++  MEERG   +E  Y+ L
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I    +    ++A +++  M       +   Y  +I GLC  G   EA ++ + M   + 
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
           +PN   Y+ ++ G+ + GN ++A+ +  +M +     N   YS  I  LC+DGK  EA +
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNN 572
           +  QML  G KP V  Y  +    +N
Sbjct: 471 VWAQMLGKGCKPDVVAYGSMINGLSN 496



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 172/396 (43%), Gaps = 46/396 (11%)

Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
           +I    K  L D A+  F  M  S  +P   T+ +L+  + K+   D+      E    +
Sbjct: 175 VIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE----M 230

Query: 172 ELD-----VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           ++D       +F +LI G C+ GDL +  ++++ +   G +PN V Y +LI G C  G +
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A  L  ++     V    TY  +I GL K G   DG      M+  G   + Y Y+ L
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I     EGK  E  +LF EM  +E   N + Y+ +I GLC++ +  EA  +L +M     
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFN-------------------------------- 374
            PN  TY+ L+ GF +AG   KA  ++                                 
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470

Query: 375 ---QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM--EERGITPSEVTYTILIDS 429
              Q+   G  P VV Y  +I   S AG  + A  L  EM  +E    P  VTY IL+++
Sbjct: 471 VWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNA 530

Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +   + +A ++ + M   G  PD+ T  + +  L
Sbjct: 531 LCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 136/309 (44%), Gaps = 39/309 (12%)

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHR-------------------------------- 309
           T+  LI  Y N G      K+ D MR                                  
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 310 --EVAC--NVVTYNTLICGLCKEMRVQEAERLLDQM---KMAGISPNVITYNKLIDGFCD 362
             E  C   V ++N+++  + +E     A    + +   K   ISPNV+T+N +I   C 
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            G  D A ++F  +  +   P V TY  L+    KA     A  L+ EM+  G  PS VT
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 241

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           + +LI+   +  D+ +  ++   M   G +P+  TY  LIHGLC+KG +++A  L + M 
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
            +K  PN V Y  +I G  K+G +    R+L  M E+G   N   YS+ I  L ++GK  
Sbjct: 302 SSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQ 361

Query: 543 EAEVLLNQM 551
           EA  L  +M
Sbjct: 362 EAMQLFKEM 370



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 163/368 (44%), Gaps = 30/368 (8%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           + N VT + L   +    LK +L ++A+    +M+ S   P   T+ +++  ++K     
Sbjct: 271 APNEVTYNTLIHGLC---LKGKL-EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 326

Query: 159 KGW--LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
            G   L   E R    ++ Y +  LI G  + G   +A ++  ++       N ++Y+++
Sbjct: 327 DGARVLALMEER-GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAV 385

Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
           IDG C++G  + A  +  ++         +TY+ L+ G F+ G      E ++ M  +  
Sbjct: 386 IDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNF 445

Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
           + +   Y+ LIH  C +GKV E   ++ +M  +    +VV Y ++I GL     V++A +
Sbjct: 446 TQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQ 505

Query: 337 LLDQM--KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
           L ++M  +     P+V+TYN L++  C      +A  L N +   G  P +VT  + +R 
Sbjct: 506 LYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRT 565

Query: 395 FSKAGNSKM---------------------ASDLVREMEERGITPSEVTYTILIDSFVRS 433
             +  +                        AS +V  M ++ + P   T+T +++     
Sbjct: 566 LREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNP 625

Query: 434 DDMEKAFE 441
             ++ A +
Sbjct: 626 KKVQAAIQ 633


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/313 (36%), Positives = 169/313 (53%), Gaps = 3/313 (0%)

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V T  TY  LI GL K     + ++  E+M  +G  P ++TY  LI  +C   K  +  +
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGF 360
           +F+++  R    +VVTY+ LI GLCKE R++EA  L  +M K     PN +TYN LI GF
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
           C  G+ D+A  L  ++   G SP VVTY  L+  F K      A DL+ +M  +G+TP+ 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
           VT+T L+D   R + +  A  +   M++   SP VYTY  ++ G C    ++EA K    
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM-- 288

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
           + E    PN V +N+MI G CK   S  A+ L+ E   +   P++  Y++ I VLC++ K
Sbjct: 289 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 541 WPEAEVLLNQMLK 553
             EA  +  +ML+
Sbjct: 349 VDEACRVYRKMLE 361



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 165/325 (50%), Gaps = 4/325 (1%)

Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
           P  V Y SLI G CK      A  L  ++   G +    TYT LI G  K+    D    
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM-RHREVACNVVTYNTLICGLC 326
           +E++   G  P + TY+CLI   C EG++ E   LF  M +      N VTYN+LI G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +  ++ EA  LL++M   G SP+V+TY  L++GFC     D A+ L NQ+   G +P+VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           T+  L+    +      A  ++ EM  +  +P+  TY  ++D + R + +E+A +   ++
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF--ML 289

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
           ++    P+V ++ ++I GLC      EA +L       +  P+ V+Y  +I   C+E   
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 507 YRALRLLGEM-NEKGLVPNIASYSS 530
             A R+  +M  E G +PN  +YS+
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYST 374



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P+  TYN LI   C   + SE + L +EM +     ++ TY TLI G CK  +  +A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFS 396
            +Q+   G  P+V+TY+ LIDG C  G   +A  LF ++ KS    P+ VTYN LI  F 
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
           + G    A +L+  M E G +P  VTYT L++ F +   ++ A+++ + M + G +P+V 
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
           T+  L+ GLC +  + +A  +   M      P    YN ++ GYC+      A + +  +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY----NILYRAK 570
            E    PN+ S++  I  LC+  +  EA  L+ +  +    P V +Y    ++L R K
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREK 347



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 4/320 (1%)

Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
           ++  LI G C+A   ++A+++L ++   G  P++  YT+LI G CK+   + A  +F ++
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG-VSPSLYTYNCLIHEYCNEGK 295
              G      TY+ LI GL K G  K+  + + +M  +G   P+  TYN LI  +C  GK
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175

Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
           + E   L + M     + +VVTY TL+ G CK  R+ +A  LL+QM   G++PNV+T+  
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235

Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
           L+DG C       A  +  +++    SP+V TYN ++  + +    + A   +  +EE  
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMD 293

Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
             P+ V++ I+I    + +   +A E+    ++   +PDV  Y  +I  LC +  + EA 
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353

Query: 476 KLFNSMWETK-LEPNDVVYN 494
           +++  M E     PN + Y+
Sbjct: 354 RVYRKMLEEPGCLPNSITYS 373



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 158/320 (49%), Gaps = 7/320 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I    K+  + +A     +M+ SG  P   T+ +L+    KS   D     F +  
Sbjct: 57  YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFS-PNVVIYTSLIDGCCKNGDI 226
            +    DV ++  LI G C+ G L +A ++  ++ + G   PN V Y SLI G C+ G +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           + A  L  ++ E G      TYT L+ G  K     D ++   +M   G++P++ T+  L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER-LLDQMKMAG 345
           +   C E ++S+   +  EMR +  +  V TYNT++ G C+  +++EA + +L++M    
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--- 293

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             PNV+++N +I G C    + +A  L  + +    +P VV Y  +I    +      A 
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353

Query: 406 DLVREM-EERGITPSEVTYT 424
            + R+M EE G  P+ +TY+
Sbjct: 354 RVYRKMLEEPGCLPNSITYS 373


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 183/356 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+Y F  LI    E+G L  A E      E  F         +++   K    +     +
Sbjct: 71  DIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
           ++I E G   + + + +L+    K+G  +     ++ +   G+ PS+ +YN L++ Y   
Sbjct: 131 KEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + EGF+L   M    V  +V TY+ LI GLCKE ++ +A  L D+M + G+ PN +T+
Sbjct: 191 GDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTF 250

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G  D A  ++ Q+ S    P ++TYN LI    K G+ K A+DL+ EM  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSM 310

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P ++TYT LID   +  +++ AFE    M +     D   Y  LI GLC +G   +
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVD 370

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           A K+   M    L+P+   Y M+I  +CK+G+ ++  +LL EM   G VP++ +Y+
Sbjct: 371 AEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYN 426



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 210/441 (47%), Gaps = 15/441 (3%)

Query: 29  FSLFNWASRQG---LQHTPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRITSSSFT 84
           FS F W S       +HT  S   ++  L + +M S + +  Q ++ +   G+ ++S   
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSR--KGKGSASXV- 57

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
                     +  +     +   ++  +I A+L+S     A+  +    +       +T 
Sbjct: 58  -------FAAILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTC 110

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             +L  ++K   F   W F+ E   C     +Y F IL+   C+ GD+  A  V + + +
Sbjct: 111 RKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITK 170

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+VV Y +L++G  + GD++    L   +   G+    +TY+VLI GL K     D
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDD 230

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E +++M + G+ P+  T+  LI  +C  G+V    +++ +M  + +  +++TYN LI 
Sbjct: 231 ANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIY 290

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK+  +++A  L+ +M M G+ P+ ITY  LIDG C  G  B AF    ++       
Sbjct: 291 GLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRL 350

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             V Y  LI    + G    A  ++R M   G+ P   TYT++I+ F +  D+ K  ++ 
Sbjct: 351 DDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLL 410

Query: 444 SLMQKSGFSPDVYTYGVLIHG 464
             MQ+ G  P V TY VL++G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 149/300 (49%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ E G+  ++  +  L+   CK+GDI  A  +F  I + GL  +  +Y  L+ G  + G
Sbjct: 132 EILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +GF     M  +GV P +YTY+ LI+  C E K+ +  +LFDEM  + +  N VT+ 
Sbjct: 192 DLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFT 251

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK  RV  A  +  QM    + P++ITYN LI G C  G+  +A  L  ++   
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMK 311

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P  +TY  LI    K GN   A +    M E  I   +V YT LI    +      A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDA 371

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M   M   G  PD  TY ++I+  C KG++ + SKL   M      P+ V YN+++ G
Sbjct: 372 EKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 17/250 (6%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           +Y T+I  LC    + EA+ L+           V+   K        G     F    + 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLI----------QVVVSRK------GKGSASXVFAAILET 64

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K   Q   +  ++ LI A+ ++G  + A +  R   E        T   +++  ++    
Sbjct: 65  KGT-QRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYF 123

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           +  +  Y  + + G+   +Y + +L+H  C  G+++ A  +F+++ +  L P+ V YN +
Sbjct: 124 KLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTL 183

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + GY + G+     RL   M   G+ P++ +YS  I  LC++ K  +A  L ++ML  GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGL 243

Query: 557 KPSVSLYNIL 566
            P+   +  L
Sbjct: 244 VPNXVTFTTL 253


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 241/529 (45%), Gaps = 70/529 (13%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++D   K+ +++ A   F  +L+  + P   T+++L+    K    +KG L   E 
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK---- 222
             K +  +V  +  ++ G  + G LN+A +V+ ++ +    PNV +Y +LIDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 223 -------------------------------NGDIERAKMLFRKIGELGLVATQHTYTVL 251
                                          +G +E A  LF+ +   GL+  +  YT +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 252 ICGLFKNGLQKDGFE----------------------------------FYEKMQLNGVS 277
           + G FK G + D F                                   F+  M+  G++
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLA 433

Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
           P   T+N +I+ YC EG +    KL +EM+   +  N +T N L+  LC    +++   L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           L+ M + G  P   T+  ++D    +   D    + +QL   G    + TYN LI  F +
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
            G  + A+ + ++M  +GI    +TY  LI  +  S  ++KAF ++S M   G SP+V T
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y +L+ GL     +KEA+ L N M E  L PN   Y++++ G+ K GN    ++L  EM 
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            KG VP   +Y+  I    +  K  +A+ L+ +M   G+ P+ S Y+IL
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 211/466 (45%), Gaps = 71/466 (15%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------------- 218
           D+ ++  L+ G C+ GDL  A +++ ++  +   PNV+ YT+LID               
Sbjct: 51  DIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMY 110

Query: 219 --------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                               G CK+G +E AK +FR++ E+G+V  + +Y  LI  LFK 
Sbjct: 111 DEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE 170

Query: 259 GLQKDGFEFYEKMQLNGVS-----------------------------------PSLYTY 283
           G   + F    +M + G+                                    P+  TY
Sbjct: 171 GNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + LI  +C  G V++G  L  EM  + +  NV+ Y++++ G  K+  + EA  ++ +M  
Sbjct: 231 SALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             I PNV  Y  LIDG+  A +   A  LF ++KS G   +    +  +    ++G  + 
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L ++M  RG+ P  V YT ++D F ++     AF +   M +     DV  Y VLI+
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL   G   E+      M +  L P+   +N MI  YCKEGN   AL+LL EM   GL P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N  + +  +  LC  G+  +   LLN ML +G  P+ + +  +  A
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 212/466 (45%), Gaps = 69/466 (14%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++   V  F +LI G C  G++++A E+L  ++  G +P++V Y +L++G CK GD+  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K L  +I  + L     TYT LI    K+   +D    Y++M +  + P + TY C+++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-- 347
            C  GKV E   +F EM    V  N  +Y TLI  L KE  V EA  L  +M + GI   
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 348 ---------------------------------PNVITYNKLIDGFCDAGETDKAFRLFN 374
                                            PN +TY+ LIDG C  G+ +K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++     P+V+ Y+ ++  ++K G    A D++R+M +R I P+   Y  LID + ++D
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
               A +++  M+  G   + +     ++ L   G M+EA +LF  M    L P+ V Y 
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEK----------------------------------G 520
            M+ G+ K G    A  +  EM EK                                  G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           L P+ A++++ I   C++G    A  LLN+M   GLKP+    NIL
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 197/449 (43%), Gaps = 23/449 (5%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+     A     +M +         +N L+  + K   ++         +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +  D  +F  +I   C+ G+L  A ++LN+++  G  PN +    L+   C  G+IE+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L   +  +G   T  T+  ++    K+         ++++   GV   L TYN LI 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C  G +     +F +M  + +  +++TYN LI G C    +++A  +  QM   G+SP
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TYN L+ G   A    +A  L NQ+K  G  P+  TY++L+    K GN K    L 
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
            EM  +G  P   TY +LI  F +   M +A E+   MQ  G  P+  TY +LI G    
Sbjct: 670 CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
               E +K     ++ +                       A RL  EMNEKG +P   + 
Sbjct: 730 SKQPELNKSLKRSYQAE-----------------------AKRLFEEMNEKGFIPCENTL 766

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           +     L + GK  +A+ +LN++ K  +K
Sbjct: 767 ACISFTLAKPGKKADAQRILNKLYKKKVK 795



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%)

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           LN  +      +V  +  LIDG C+NG+I RA  L   +   G      TY  L+ G  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G      +   ++ L  + P++ TY  LI  YC    + +   ++DEM  + +  +VVT
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  ++ GLCK  +V+EA+ +  +M+  G+ PN  +Y  LID     G   +AF L  ++ 
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    VV Y  L+    KAG +  A D+ + + E  + P+ VTY+ LID   +  D+ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           K   +   M++    P+V  Y  ++ G   KG + EA  +   M +  + PN  VY  +I
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY K      AL L  EM  +GL  N     S +  L + G+  EA+ L   M+  GL 
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 558 PS 559
           P 
Sbjct: 365 PD 366



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +H E+  +V  +N LI G C+   +  A  LL+ MK  G +P+++TYN L++GFC  G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAF------------------------------- 395
             A +L  ++      P+V+TY  LI A+                               
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 396 ----SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
                K+G  + A  + REMEE G+ P+  +Y  LIDS  +  ++ +AF +   M   G 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             DV  Y  L+ GL   G    A  +F  + E  L PN V Y+ +I G+CK G+  +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LL EM EK + PN+  YSS +    + G   EA  ++ +M++  + P+V +Y  L
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 120/231 (51%)

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R L+  +   I  +V  +N LIDG+C  GE  +A  L   +K+ G +P +VTYN L+  F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G+   A  L+ E+    + P+ +TYT LID++ +S  +E A  MY  M      PDV
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  +++GLC  G ++EA  +F  M E  + PN   Y  +I    KEGN   A  L G 
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  +G+  ++  Y++ +  L + G    AE +   +L+  L P+   Y+ L
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N++I GYC+ G   RA+ LL  M  +G  P+I +Y++ +   C+ G    A+ L+ ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 553 KLGLKPSVSLYNILYRA 569
            + L+P+V  Y  L  A
Sbjct: 80  LVNLEPNVITYTTLIDA 96


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 192/371 (51%), Gaps = 2/371 (0%)

Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
           GDL+  F     +   G + +V  Y  +I   CK GD+  AK LF ++ ++GL     TY
Sbjct: 233 GDLSNKF--FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTY 290

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G  K GL  + F  +E+M+  G  P + TYN LI+ +C   ++ + F    EM++
Sbjct: 291 NSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKN 350

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +  NVVTY+TLI  LCKE  +Q+A + L  M+  G+SPN  TY  LID  C AG    
Sbjct: 351 SGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSD 410

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
           A +L +++       +VVTY  L+    K G    A DL R M + G+TP+  TYT L+ 
Sbjct: 411 ALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVH 470

Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
             +++  +E A E+   +++    PD+  YG +I GLC +  ++E   + + M    +  
Sbjct: 471 GHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRA 530

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           N V+Y + +  Y K G +  AL LL EM + G+   I ++   I  LC+ G   EA    
Sbjct: 531 NSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYF 590

Query: 549 NQMLKLGLKPS 559
            +M    L+P+
Sbjct: 591 ARMADFNLQPN 601



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 273/583 (46%), Gaps = 47/583 (8%)

Query: 22  KLPPLKAFSLFNWA-SRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
           K  P  A   F WA ++ G   T +S  +++ +L     +  +  A   + ++IS R   
Sbjct: 106 KQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFY---ARMYFDANFFLKELISSRRIL 162

Query: 81  SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
             F    +L      + + +  V    +++++    ++  + ++A   F +M    V P+
Sbjct: 163 PGFDVFEVL------WSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPK 216

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
           + + N+ L  + K+   D    FF +     +   V+++ I+I   C+ GD+  A  + +
Sbjct: 217 ARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFH 276

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG------------------- 240
           Q+++MG +P++V Y SLIDG  K G ++ +  LF ++ ++G                   
Sbjct: 277 QMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYE 336

Query: 241 ----------------LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
                           L     TY+ LI  L K  + +   +F   M+  G+SP+ +TY 
Sbjct: 337 QMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYT 396

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LI   C  G +S+  KL DEM   +V  NVVTY TL+ GLCKE R+ EAE L   M  A
Sbjct: 397 SLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKA 456

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G++PN+ TY  L+ G       + A  L  ++K     P ++ Y  +I         +  
Sbjct: 457 GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEEC 516

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
             ++ EM+  GI  + V YTI +D++ ++    +A  +   M   G    + T+ VLI G
Sbjct: 517 EFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDG 576

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDV-VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           LC KG ++EA   F  M +  L+PN+V V   +I G CK      A +L  EM +K +VP
Sbjct: 577 LCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVP 636

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +Y++ I    +   + EA  + ++M +LG++  +  Y  L
Sbjct: 637 DKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSL 679



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 208/418 (49%), Gaps = 2/418 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+ID + K  L D++   F +M D G  P   T+N+L+    K     K + F  E +
Sbjct: 290 YNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMK 349

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              ++ +V ++  LI   C+   L +A + L  +  +G SPN   YTSLID  CK G + 
Sbjct: 350 NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L  ++ ++ +     TYT L+ GL K G   +  + +  M   GV+P+L TY  L+
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           H +    +V    +L  E++ +++  +++ Y T+I GLC + +++E E ++ +MK  GI 
Sbjct: 470 HGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N + Y   +D +   G+T +A  L  ++   G   ++VT+ VLI    K G  + A D 
Sbjct: 530 ANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDY 589

Query: 408 VREMEERGITPSEVTY-TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
              M +  + P+ V   T LID   +++ +E A +++  MQ     PD   Y  LI G  
Sbjct: 590 FARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNL 649

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
              + +EA  + + M E  +E +   Y  +++G  +     +A   L EM  KG+VP+
Sbjct: 650 KHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P    ++ L   F + G  ++A + F+++      P   + N  +   +K G   +++  
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            R+M   GI  S  TY I+I    +  DM  A  ++  M++ G +PD+ TY  LI G   
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G + E+  LF  M +   EP+ + YN +I  +CK     +A   L EM   GL PN+ +
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           YS+ I  LC++    +A   L  M ++GL P+   Y  L  A
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 159/377 (42%), Gaps = 37/377 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y ++IDA  K  +  QA+ +   M   G+ P   T+ SL+    K+           E  
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           + +V  +V ++  L+ G C+ G + +A ++   + + G +PN+  YT+L+ G  KN  +E
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 228 RA-----------------------------------KMLFRKIGELGLVATQHTYTVLI 252
            A                                   + +  ++   G+ A    YT+ +
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRM 539

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
              FK G   +     ++M   GV  ++ T+  LI   C +G V E    F  M    + 
Sbjct: 540 DAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQ 599

Query: 313 CNVVTYNT-LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
            N V   T LI GLCK   ++ A++L D+M+   + P+ I Y  LIDG     +  +A  
Sbjct: 600 PNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN 659

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + +++   G    +  Y  L+   S+    + A   + EM  +GI P E+    L+  + 
Sbjct: 660 IRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYY 719

Query: 432 RSDDMEKAFEMYSLMQK 448
               +++A E++  + K
Sbjct: 720 ELGSIDEAIELHDELLK 736



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 4/204 (1%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           S +Y   +DA+ K+  + +AL    +M D GV     TF  L+  + K    ++   +F+
Sbjct: 532 SVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFA 591

Query: 166 ENRCKVELDVYSFGI---LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
                  L   +  +   LI G C+   +  A ++ +++++    P+ + YT+LIDG  K
Sbjct: 592 R-MADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLK 650

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
           + D + A  +  ++ ELG+    H YT L+ GL +  L +    F  +M   G+ P    
Sbjct: 651 HKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEIL 710

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEM 306
              L+ +Y   G + E  +L DE+
Sbjct: 711 CIRLLRKYYELGSIDEAIELHDEL 734


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 42/398 (10%)

Query: 176 YSFGILIKGCCEAGD----LNKAFEVLN---QLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
           ++F + I+GC    D    LN    V     ++ + GF  NV ++  L++  CK G+I  
Sbjct: 199 HNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICD 258

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ +F +I +  L                                    P++ ++N LI+
Sbjct: 259 AQKVFDEITKRSL-----------------------------------RPTVVSFNTLIN 283

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            YC  G +  GF+L   M       +V TY+ LI  LCKE ++  A RL  +M   G+ P
Sbjct: 284 GYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIP 343

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           N + +  LI G    G+ D     + ++ S G  P +V YN L+  F K G+   A ++V
Sbjct: 344 NDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
             M  RG+ P +VTYT LID F R  D++ A E+   M ++G   D   +  LI G+C +
Sbjct: 404 DGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKE 463

Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
           G + +A +    M    ++P+DV Y MM+  +CK+G++    +LL EM   G +PN+ +Y
Sbjct: 464 GRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTY 523

Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +  LC+ G+   A++LL+ ML +G+ P    YN L
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTL 561



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 170/338 (50%), Gaps = 4/338 (1%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCE 187
           F ++    +RP   +FN+L+    K  + D G+ L     + +   DV+++  LI   C+
Sbjct: 263 FDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCK 322

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
              ++ A  +  ++ E G  PN VI+T+LI G  +NG I+  K  ++K+   GL      
Sbjct: 323 ENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVL 382

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
           Y  L+ G  KNG         + M   G+ P   TY  LI  +C  G V    ++  EM 
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMD 442

Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
              +  + V ++ LICG+CKE RV +AER L +M  AG+ P+ +TY  ++D FC  G+  
Sbjct: 443 QNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQ 502

Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
             F+L  +++S+G  P+VVTYNVL+    K G  K A  L+  M   G+ P ++TY  L+
Sbjct: 503 TGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLL 562

Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +   R  +  K    Y    + G   D+ +Y  L++ L
Sbjct: 563 EGHHRHANASKH---YKQKPEIGIVADLASYKSLVNEL 597



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 6/327 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           + ++I+ + K    D      H M  S  RP   T+++L+  + K    D     F E  
Sbjct: 278 FNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMC 337

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +  DV  F  LI G    G ++   E   ++   G  P++V+Y +L++G CKNGD+
Sbjct: 338 ERGLIPNDVI-FTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A+ +   +   GL   + TYT LI G  + G      E  ++M  NG+      ++ L
Sbjct: 397 VAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSAL 456

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I   C EG+V +  +   EM    +  + VTY  ++   CK+   Q   +LL +M+  G 
Sbjct: 457 ICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            PNV+TYN L++G C  G+   A  L + + + G  P  +TYN L+    +  N   AS 
Sbjct: 517 IPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASK 573

Query: 407 LVREMEERGITPSEVTYTILIDSFVRS 433
             ++  E GI     +Y  L++   R+
Sbjct: 574 HYKQKPEIGIVADLASYKSLVNELYRA 600


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 186/363 (51%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           A  +  Q+E  G  PN+V    LI+  C  G +  +  +  KI +LG      T   L+ 
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 143

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
           GL   G  K    F++K+   G   +  +Y  L++  C  G+     KL   +  R    
Sbjct: 144 GLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           +VV Y+T+I GLCK+  V +A     +M   GI PNVITY+ LI GFC AG+   AF L 
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           N++     +P+V TYN+LI A  K G  K A  L+ EM  +G     VTY  ++D   +S
Sbjct: 264 NEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKS 323

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            +++KA  ++  M+K G  P+ YTY  LI GLC  G +K A KLF  +       +   Y
Sbjct: 324 QNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTY 383

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N+MI G CKEG   +AL +  +M + G +PN  ++   I  L +  +  +AE LL+ M+ 
Sbjct: 384 NVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIA 443

Query: 554 LGL 556
            GL
Sbjct: 444 KGL 446



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 204/401 (50%), Gaps = 1/401 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D  +  F+++L     P    F  +L +++K   +        +   K +E ++ +  IL
Sbjct: 47  DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           I   C  G +  +F VL ++ ++G+ P+ +   +L+ G C  G+++R+     K+   G 
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
              Q +Y  L+ GL K G  +   +    ++     P +  Y+ +I   C +  V++ + 
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            F EM  R +  NV+TY+TLI G C   ++  A  LL++M +  I+PNV TYN LID  C
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+  +A +L  ++   GQ   VVTYN ++    K+ N   A+ L  +M++ GI P++ 
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TYT LID   +   ++ A +++  +   G   DV TY V+I GLC +G   +A  + + M
Sbjct: 347 TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKM 406

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            +    PN V ++++I    ++  + +A +LL  M  KGL+
Sbjct: 407 EDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 2/299 (0%)

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
            +M++ G+ P+L T N LI+ +C+ G+++  F +  ++       + +T NTL+ GLC +
Sbjct: 89  RQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLK 148

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
             V+ +    D++   G   N ++Y  L++G C  GET  A +L   ++     P VV Y
Sbjct: 149 GEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMY 208

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
           + +I    K      A D   EM  RGI P+ +TY+ LI  F  +  +  AF + + M  
Sbjct: 209 STIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMIL 268

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSY 507
              +P+VYTY +LI  LC +G +KEA KL   M   K +P DVV YN ++ G CK  N  
Sbjct: 269 KNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHH-KGQPADVVTYNSVLDGLCKSQNLD 327

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +A  L  +M + G+ PN  +Y++ I  LC+ G+   A+ L   +L  G    V  YN++
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVM 386



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 35/239 (14%)

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D     FN+L     +P ++ +  ++    K  +   A  L R+ME +GI P+ VT  I
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE------------ 473
           LI+ F     M  +F +   + K G+ PD  T   L+ GLC+KG +K             
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 474 -----------------------ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
                                  A KL   + +    P+ V+Y+ +I G CK+    +A 
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
               EMN +G+ PN+ +YS+ I   C  G+   A  LLN+M+   + P+V  YNIL  A
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 7/181 (3%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           L ++   + NP   +  Y  +IDA  K     +A     +M   G      T+NS+L  +
Sbjct: 263 LNEMILKNINPNVYT--YNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGL 320

Query: 152 IKSCSFDKG-WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
            KS + DK   LF    +  ++ + Y++  LI G C+ G L  A ++   L   G   +V
Sbjct: 321 CKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDV 380

Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
             Y  +I G CK G  ++A  +  K+ + G +    T+ ++I  LF    +KD  +  EK
Sbjct: 381 RTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLF----EKDENDKAEK 436

Query: 271 M 271
           +
Sbjct: 437 L 437



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   KS+  D+A   F +M   G++P   T+ +L+  + K          F    
Sbjct: 313 YNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLL 372

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K   +DV ++ ++I G C+ G  +KA  + +++E+ G  PN V +  +I    +  + +
Sbjct: 373 VKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDEND 432

Query: 228 RAKMLFRKIGELGLV 242
           +A+ L   +   GL+
Sbjct: 433 KAEKLLHGMIAKGLL 447


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 182/356 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+Y F  LI    E+G L  A E      E  F         +++   K    +     +
Sbjct: 71  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +I E G  A+ + + +L+    K+G  +     ++ +   G+ PS+ +YN L++ Y   
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + EGF+L   M    V  +V TY+ LI GLCKE ++ +A  L D+M + G+ PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 250

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G  D A  ++ Q+ S   SP ++TYN LI    K G+ K A  L+ EM  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 310

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P ++TYT LID   +  D++ AFE    M +     D   Y  LI GLC +G   +
Sbjct: 311 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVD 370

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           A K+   M    L+P+   Y M+I  +CK+G+ ++  +LL EM   G VP++ +Y+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYN 426



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 218/441 (49%), Gaps = 15/441 (3%)

Query: 29  FSLFNWASRQG---LQHTPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRITSSSFT 84
           FS F W S       +HT  S   ++  L + +M S + +  Q ++ +   G+ ++S+  
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSR--KGKGSASAV- 57

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
                     +F +     +   ++  +I A+L+S     A+  +    +       +T 
Sbjct: 58  -------FAAIFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTC 110

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             +L  ++K   F   W F+ E   C     +Y F IL+   C+ GD+  A  V + + +
Sbjct: 111 RKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK 170

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+VV Y +L++G  + GD++    L   +   G+    +TY+VLI GL K     D
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDD 230

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E +++M + G+ P+  T+  LI  +C  G+V    +++ +M  + ++ +++TYNTLI 
Sbjct: 231 ANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK+  +++A  L+D+M M G+ P+ ITY  LIDG C  G+ D AF    ++       
Sbjct: 291 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL 350

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             V Y  LI    + G S  A  ++REM   G+ P   TYT++I+ F +  D+ K  ++ 
Sbjct: 351 DDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 444 SLMQKSGFSPDVYTYGVLIHG 464
             MQ+ G  P V TY VL++G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 152/300 (50%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ E G+  ++  +  L+   CK+GDI  A+ +F  I + GL  +  +Y  L+ G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +GF     M  +GV P +YTY+ LI+  C E K+ +  +LFDEM  + +  N VT+ 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFT 251

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK  RV  A  +  QM    +SP++ITYN LI G C  G+  +A  L +++   
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 311

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P  +TY  LI    K G+   A +  + M +      +V YT LI    R      A
Sbjct: 312 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDA 371

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M   M   G  PD  TY ++I+  C KG++ + SKL   M      P+ V YN+++ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 17/250 (6%)

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           +Y T+I  LC    + EA+ L+           V+   K        G     F    + 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLI----------QVVVSRK------GKGSASAVFAAIFET 64

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           K   Q   +  ++ LI A+ ++G  + A +  R   E        T   +++  ++    
Sbjct: 65  KGT-QRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYF 123

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
           +  +  Y  + + G+   +Y + +L+H  C  G+++ A  +F+++ +  L P+ V YN +
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTL 183

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           + GY + G+     RL   M   G+ P++ +YS  I  LC++ K  +A  L ++ML  GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGL 243

Query: 557 KPSVSLYNIL 566
            P+   +  L
Sbjct: 244 VPNSVTFTTL 253


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 218/465 (46%), Gaps = 22/465 (4%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           +Y SIID + K      AL  F  M   G RP + T++SL+  +I+     K     ++ 
Sbjct: 371 IYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKM 430

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
               +   V ++  LI+G C+  + + AF +   +E+ G +P+   Y  L    CK+G  
Sbjct: 431 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRA 490

Query: 227 ERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           E A   L RK    G+V T+ TYT L+ G  K G         EKM   G     YTY+ 
Sbjct: 491 EEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSV 546

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           L+   C + K++E   + D+M    V CN+V Y  +I  + KE +   A+ + ++M  +G
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P+  TY   I  +C  G+ ++A  L  +++ +G +P VVTYNV I      G    A 
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSD----------------DMEKAFEMYSLMQKS 449
             ++ M +    P+  TY IL+  F++                  +++  +++   M K 
Sbjct: 667 STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKH 726

Query: 450 GFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRA 509
           G +P   TY  +I G C    ++EA  LF+ M    + PN+ +Y M+I   C      +A
Sbjct: 727 GLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKA 786

Query: 510 LRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
           +  + +M E G  P++ SY   I  LC +G + +A+ L   +L +
Sbjct: 787 VSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGM 831



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/583 (26%), Positives = 249/583 (42%), Gaps = 99/583 (16%)

Query: 20  MAKLPPLKAFSLFNWASRQ-GLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRI 78
           +A L P  A + F W +R+ G +HT                + SHAA             
Sbjct: 63  VAPLDPATALAFFEWVARRPGFRHT----------------AASHAA------------- 93

Query: 79  TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
                        L QL      P    +L  S++     +    +A+     +   G  
Sbjct: 94  -------------LLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVGGD 140

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
            R            K+C     WL           + YS+ ILI+G CE   + +A  +L
Sbjct: 141 LR------------KAC-----WLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL 183

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
             + + G S N+  YT LI G CK G I  A+ +  ++   G+V +  TY  +I G  K+
Sbjct: 184 VMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKS 243

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  KD       M+ NG +P  +TYN LI+  C E K  E  +L ++   R     V+T+
Sbjct: 244 GRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITF 302

Query: 319 NTLICGLCKEMRVQEAERL-----------------------------------LDQMKM 343
             +I G CK  R+ +A R+                                   + +M  
Sbjct: 303 TNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFA 362

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
            G++PNV+ Y  +IDG+C  G+   A  +F  ++  G  P+  TY+ LI    +      
Sbjct: 363 NGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHK 422

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+ +M+E GITP  +TYT LI    +  + + AF ++ +M+++G +PD   Y VL H
Sbjct: 423 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTH 482

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            LC  G  +EA   ++ +    +    V Y  ++ G+ K GN+  A  L+ +M  +G   
Sbjct: 483 ALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 539

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +  +YS  +  LC+  K  EA  +L+QM   G+K ++  Y I+
Sbjct: 540 DSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTII 582



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 225/507 (44%), Gaps = 49/507 (9%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + +II+ + K+   D AL     ML S  +     +  L+  +IK C F +     SE  
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMF 361

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  +V  +  +I G C+ G +  A EV   +E  G  PN   Y+SLI G  ++  + 
Sbjct: 362 ANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLH 421

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
           +A  L  K+ E G+     TYT LI G  K     + F  +E M+ NG++P    YN L 
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 481

Query: 288 HEYCNEGKVSEGFK--------------------------------LFDEMRHREVACNV 315
           H  C  G+  E +                                 L ++M +     + 
Sbjct: 482 HALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+ L+  LCK+ ++ EA  +LDQM ++G+  N++ Y  +I      G+ D A  +FN+
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           + S+G  PS  TY V I ++ K G  + A  L+ EME  G+ P  VTY + I+       
Sbjct: 602 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGY 661

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLI-HGLCM---KGNMKEASKLFN-----SMWET-- 484
           M++AF     M  +   P+ +TY +L+ H L M     +  + S ++N     ++W+   
Sbjct: 662 MDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLE 721

Query: 485 -----KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
                 L P  V Y+ +I G+CK      A  L   M  K + PN   Y+  I   C   
Sbjct: 722 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIK 781

Query: 540 KWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            + +A   +  M++ G +P +  Y+ L
Sbjct: 782 LFGKAVSFVTDMIEFGFQPHLESYHYL 808



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M L G   + Y+Y  LI   C    V E   L   M     + N+ TY  LI GLCKE R
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           +  A R+L++M + G+ P+V TYN +IDG+C +G    A  +   ++ NG +P   TYN+
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNI 270

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
           LI         + A +L+ +   RG TP+ +T+T +I+ + +++ ++ A  + + M  S 
Sbjct: 271 LIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSN 329

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
              D+  YGVLI+ L  K   KEA +  + M+   L PN V+Y  +I GYCK G    AL
Sbjct: 330 CKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAAL 389

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
            +   M  +G  PN  +YSS I  L QD K  +A  L+ +M + G+ P V  Y  L + +
Sbjct: 390 EVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 449



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 187/428 (43%), Gaps = 27/428 (6%)

Query: 28  AFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILK-IISGRITSSS---- 82
           AF LF    + GL    Q+ +++   L    S  +  A   L+ K ++  ++T +S    
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCK--SGRAEEAYSFLVRKGVVLTKVTYTSLVDG 515

Query: 83  FTPRSLLCHLTQLFPSSSNPVTK--SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           F+          L     N   K  S  Y  ++ A  K +  ++AL    QM  SGV+  
Sbjct: 516 FSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCN 575

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              +  ++  +IK    D     F+E      +    ++ + I   C+ G + +A  ++ 
Sbjct: 576 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 635

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK-- 257
           ++E  G +P+VV Y   I+GC   G ++RA    +++ +        TY +L+    K  
Sbjct: 636 EMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMS 695

Query: 258 -------------NGLQKDG-FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
                        N ++ D  ++  E+M  +G++P+  TY+ +I  +C   ++ E   LF
Sbjct: 696 LVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLF 755

Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
           D MR ++++ N   Y  LI   C      +A   +  M   G  P++ +Y+ LI G CD 
Sbjct: 756 DHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDE 815

Query: 364 GETDKAFRLF-NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           G+ DKA  LF + L     + + V + +L     KAG+    S L+  ME R       T
Sbjct: 816 GDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSET 875

Query: 423 YTILIDSF 430
           Y+++ D+ 
Sbjct: 876 YSMVTDNI 883


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 226/456 (49%), Gaps = 7/456 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
           +I+D  +K+ +  +    F +ML  G+ P   T+N+L+          K W  + +   +
Sbjct: 143 AILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202

Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
            ++ +V ++  +I   CE   +  A  +  +++E G  PN+  Y +L+    K  +I+ A
Sbjct: 203 RIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHA 262

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
            + +  + + GLV     +T LI GL K     +    +  M    V+P++  YN LIH 
Sbjct: 263 LVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
               G   E    F E+  +E+  +  T + ++ GLC   ++Q A R L+ M+ +GI+ N
Sbjct: 323 AFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382

Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
              YN LID +C +G  D+A     ++   G  P+VVTY+ LI   SK G  ++A  +  
Sbjct: 383 AAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYT 442

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           EM  +G+ P+ VTYT LI    ++ DM+ AF +   M++ G   +  T  VL+ GLC + 
Sbjct: 443 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502

Query: 470 NMKEASKL---FNSMWETKLEP---NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
            +++A +    ++   +++  P   N V Y  +I+G   +G    A      M + G+VP
Sbjct: 503 RVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVP 562

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           +  +Y+  I  LC  G    A +L   M+K+G+KP+
Sbjct: 563 DRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 207/423 (48%), Gaps = 7/423 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           Y ++I+A        +A   + QM+   + P   T+ +++  + +  C  D   LF    
Sbjct: 176 YNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMK 235

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++Y++  L+    +  ++  A      L + G  PN VI+T+LIDG CK   I 
Sbjct: 236 EAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRIT 295

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F  +    +  T   Y  LI G F++G  ++   F++++    + P  +T + ++
Sbjct: 296 EAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVV 355

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ G++    +  + M+   +A N   YN LI   CK   + EA     +M   G+ 
Sbjct: 356 RGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVE 415

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY+ LIDG    GE + A  ++ ++ + G  P+VVTY  LI   +K G+   A  L
Sbjct: 416 PNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWL 475

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM---YSLMQKSGFSPDV---YTYGVL 461
            +EMEE+GI  + +T ++L+D   R + ++ A      YS  +KS  +P +    TY  L
Sbjct: 476 QKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTL 535

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+GL + G   EA   F+ M ++ + P+   Y ++I G C  G    A+ L  +M + G+
Sbjct: 536 IYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGV 595

Query: 522 VPN 524
            P 
Sbjct: 596 KPT 598



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 7/325 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    ++ ++ID   K+    +A   F  M    V P    +NSL+    +S    +   
Sbjct: 275 VPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALA 334

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           FF E  R ++  D ++  I+++G C+ G +  A   L  +++ G + N   Y  LID  C
Sbjct: 335 FFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYC 394

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K+G+++ A +   ++ E+G+     TY+ LI G  KNG  +     Y +M   GV P++ 
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 454

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ- 340
           TY  LIH +   G +   F L  EM  + +  N +T + L+ GLC+E RVQ+A R + + 
Sbjct: 455 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 514

Query: 341 --MKMAGISP---NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
              K +  +P   N +TY  LI G    G+ ++A   F+ ++ +G  P   TY ++IR  
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 396 SKAGNSKMASDLVREMEERGITPSE 420
              G    A  L  +M + G+ P++
Sbjct: 575 CMLGYVLNAMMLYADMVKVGVKPTK 599



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
           GVL+  L       EA  +F  + E    P     N ++ G  K     R   L  EM  
Sbjct: 110 GVLVIALSQMALPDEALSVFGRLRELPALP---ACNAILDGLVKAHMLARVWELFDEMLG 166

Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           +G+VP++ +Y++ I      G   +A  + +QM+   + P+V  Y  +  A
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYA 217


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 182/356 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D+Y F  LI    E+G L  A E      E  F         +++   K    +     +
Sbjct: 71  DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            +I E G  A+ + + +L+    K+G  +     ++ +   G+ PS+ +YN L++ Y   
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G + EGF+L   M    V  +V TY+ LI GLCKE ++ +A  L D+M + G+ PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LIDG C  G  D A  ++ Q+ S   SP ++TYN LI    K G+ K A  L+ EM  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           +G+ P ++TYT LID   +  D++ AFE    M +     D   Y  LI GLC +G   +
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
           A K+   M    L+P+   Y M+I  +CK+G+ ++  +LL EM   G VP++ +Y+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYN 426



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 216/441 (48%), Gaps = 15/441 (3%)

Query: 29  FSLFNWASRQG---LQHTPQSISIILRLLLS-KMSSHSHAAAQTLILKIISGRITSSSFT 84
           FS F W S       +HT      ++  L + +M S + +  Q ++ +   G+ ++S+  
Sbjct: 1   FSFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSR--KGKGSASAV- 57

Query: 85  PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
                     +  +     +   ++  +I A+L+S     A+  +    +       +T 
Sbjct: 58  -------FAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTC 110

Query: 145 NSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
             +L  ++K   F   W F+ E   C     +Y F IL+   C+ GD+  A  V + + +
Sbjct: 111 RKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK 170

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
            G  P+VV Y +L++G  + GD++    L   +   G+    +TY+VLI GL K     D
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDD 230

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
             E +++M + G+ P+  T+  LI  +C  G+V    +++ +M  + ++ +++TYNTLI 
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK+  +++A  L+D+M + G+ P+ ITY  LIDG C  G+ D AF    ++       
Sbjct: 291 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             V Y  LI    + G S  A  ++REM   G+ P   TYT++I+ F +  D+ K  ++ 
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLL 410

Query: 444 SLMQKSGFSPDVYTYGVLIHG 464
             MQ+ G  P V TY VL++G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 152/300 (50%)

Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
           ++ E G+  ++  +  L+   CK+GDI  A+ +F  I + GL  +  +Y  L+ G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
              +GF     M  +GV P +YTY+ LI+  C E K+ +  +LFDEM  + +  N VT+ 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251

Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
           TLI G CK  RV  A  +  QM    +SP++ITYN LI G C  G+  +A  L +++   
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 311

Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
           G  P  +TY  LI    K G+   A +  + M +  I   EV YT LI    +      A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371

Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            +M   M   G  PD  TY ++I+  C KG++ +  KL   M      P+ V YN+++ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 91/186 (48%)

Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
           Q   +  ++ LI A+ ++G  + A +  R   E        T   +++  ++    +  +
Sbjct: 68  QRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVW 127

Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
             Y  + + G+   +Y + +L+H  C  G+++ A  +F+++ +  L P+ V YN ++ GY
Sbjct: 128 GFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGY 187

Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
            + G+     RL   M   G+ P++ +YS  I  LC++ K  +A  L ++ML  GL P+ 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 247

Query: 561 SLYNIL 566
             +  L
Sbjct: 248 VTFTTL 253


>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 754

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 210/405 (51%), Gaps = 6/405 (1%)

Query: 168 RC----KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE-EMGFSPNVVIYTSLIDGCCK 222
           RC    K +L +  F ++ K   + GD  ++  +   ++ ++   PN  IYT +I    +
Sbjct: 95  RCLEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGR 154

Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
            G +E++  +F ++   G+  +  +YT LI    ++G  +   E  E+M+   V+PS+ T
Sbjct: 155 EGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILT 214

Query: 283 YNCLIHEYCNEGKVSEGF-KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM 341
           YN +I+     G   EG   LF EMRH  +  +++TYNTL+          EAE +   M
Sbjct: 215 YNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTM 274

Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNS 401
              G+ P++ TY  L++ F    + +K   L  +++S+G  P + +YNVL+ A++  G+ 
Sbjct: 275 NEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDI 334

Query: 402 KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
           + A  + R+M+E    P+ VTY++L++ +      +   E++  M+ S   PDV TY VL
Sbjct: 335 RHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVL 394

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I      G  KE   LF+ M E  +EPN   Y  +I+   K G    A ++L  M+EKG+
Sbjct: 395 IEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGI 454

Query: 522 VPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           VP+  +Y+  I    Q   + EA V+ N M ++G KP+V  YN L
Sbjct: 455 VPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSL 499



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 222/475 (46%), Gaps = 12/475 (2%)

Query: 103 VTKSRL-YESIIDAHLKSRLSDQALF-YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
           VT S L Y ++I++  +  L+ + L   F +M   G++P   T+N+LL         D+ 
Sbjct: 208 VTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEA 267

Query: 161 WLFF-SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDG 219
            + F + N   +  D+ ++  L++   +   L K  E+L ++E  G  P++  Y  L++ 
Sbjct: 268 EMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEA 327

Query: 220 CCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPS 279
               GDI  A  +FR++ E   V    TY++L+     +G   D  E + +M+++   P 
Sbjct: 328 YASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPD 387

Query: 280 LYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLD 339
           + TYN LI  +   G   E   LF +M    V  N+ TY  LI    K    ++A+++L 
Sbjct: 388 VGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILL 447

Query: 340 QMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
            M   GI P+   Y  +I+ +  A   ++A  +FN +   G  P+V TYN LI  F++ G
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507

Query: 400 NSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYG 459
             K +  ++ +M E G+     ++  +I+ + +    E+A + Y  ++K+ F PD  T+ 
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFE 567

Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
            ++   C  G + E+ + F  +  + + P+ + Y MMI  Y +      A  +L EM   
Sbjct: 568 AVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEM--- 624

Query: 520 GLVPNIASYSSTIGVLCQD-----GKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            +   +++    +G + +        W   E + +++   G    +  YN L  A
Sbjct: 625 -VTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEA 678



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/496 (22%), Positives = 208/496 (41%), Gaps = 52/496 (10%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y ++++A     L D+A   F  M + G+ P   T+ +L+    K    +K      E  
Sbjct: 251 YNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEME 310

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
               L D+ S+ +L++     GD+  A  V  Q++E    PN V Y+ L++    +G  +
Sbjct: 311 SSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYD 370

Query: 228 RAKMLFRKI-------------------GELG----LVATQH------------TYTVLI 252
             + LF ++                   GE G    +V   H            TY  LI
Sbjct: 371 DVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLI 430

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
               K GL +D  +    M   G+ PS   Y  +I  Y       E   +F+ M      
Sbjct: 431 YACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSK 490

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
             V TYN+LI    +    +E+E ++ +M  +G++ +  ++N +I+G+   G+ ++A + 
Sbjct: 491 PTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKT 550

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + +L+     P   T+  ++  +  AG    + +  RE+   GI PS + Y ++I  + R
Sbjct: 551 YVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYAR 610

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK------LFNSMWETKL 486
           S+  + A+E+   M  +  S +++     + G  MKG+  + S       +F+ +     
Sbjct: 611 SNRWDDAYEVLDEMVTNKVS-NIHQ----VVGKMMKGDYDDYSNWQMVEYVFDKLNSEGC 665

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS-----YSSTIGVLCQDGKW 541
                 YN ++      G   RA R+L E  ++GL P +       +S  +  + + G  
Sbjct: 666 GLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGLFPELFRKSKLVWSVDVHRMWEGGAC 725

Query: 542 PEAEVLLNQMLKLGLK 557
               V LN M ++ LK
Sbjct: 726 TAISVWLNNMHEMFLK 741



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 8/260 (3%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL-IFVIKSCSFDKGW 161
           V  ++ Y  +I+A+ ++   ++AL  F+ M + G +P   T+NSL+ +F       +   
Sbjct: 455 VPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEA 514

Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           + +      V  D  SF  +I+G  + G   +A +   +LE+  F P+   + +++   C
Sbjct: 515 IMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYC 574

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
             G ++ ++  FR+I   G++ +   Y ++I    ++    D +E  ++M  N VS    
Sbjct: 575 TAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQ 634

Query: 282 TYNCLIH----EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
               ++     +Y N   V     +FD++        +  YNTL+  L    + + A R+
Sbjct: 635 VVGKMMKGDYDDYSNWQMVE---YVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARV 691

Query: 338 LDQMKMAGISPNVITYNKLI 357
           L +    G+ P +   +KL+
Sbjct: 692 LSEAIKRGLFPELFRKSKLV 711


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 262/570 (45%), Gaps = 42/570 (7%)

Query: 34  WASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT-----PRSL 88
           W + Q      +S SI   L + +  S +H A     L+ + GR+           P   
Sbjct: 49  WNTTQTSGSDVES-SIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVIKQPGLE 107

Query: 89  LCHLTQLFPSSSNPVTKSRLYESI--IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
           L HLT ++  +++ + K+R+Y+S   I  HL  ++   +   F  ++D+   P  N+  S
Sbjct: 108 LKHLTHMYCLTAHILVKARMYDSAKSILRHL-CQMGIGSKSIFGALMDT--YPLCNSIPS 164

Query: 147 LLIFVIKSCSFDKGWLFFSENRCKV------ELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           +   +I+     +G + ++    ++      +  VY+  +++    +       + +  +
Sbjct: 165 VFDLLIR-VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGL 260
           + + G  PNV  +  LI+G C  G++++A  L +++ E G V T  TY  L+    K G 
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
            K   E  + M   G+   + TYN  I   C   + ++ + L  +MR   ++ N VTYNT
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343

Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKS-- 378
           LI G  KE ++  A ++ ++M    +SPN +TYN LI G C  G+ ++A RL + +++  
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 379 ---------------------NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
                                NG      T NVL+ +  + G    A   +  M   G+ 
Sbjct: 404 LRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
           P+ +TY  +I+ +    D   AF  +  M K G  P  +TYG L+ GLC  GN+ EA K 
Sbjct: 464 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
            N +       + V+YN ++   CK GN + A+ L  +M +  ++P+  +YSS +  LC+
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 538 DGKWPEAEVLLNQMLKLG-LKPSVSLYNIL 566
            GK   A  L    +  G L P+  +Y  L
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 613



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 208/483 (43%), Gaps = 19/483 (3%)

Query: 88  LLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSL 147
            LCH++++       V  S  Y+ II+ +        A  +F  M+  G  P   T+ SL
Sbjct: 453 FLCHMSRI-----GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 507

Query: 148 LIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
           L  + K  +  +   F +  +     +D   +  L+   C++G+L++A  + +++ +   
Sbjct: 508 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 567

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT-YTVLICGLFKNGLQKDGF 265
            P+   Y+SL+ G C+ G    A  LF      G +   H  YT L+ GL K G  K  F
Sbjct: 568 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 627

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
            F+E+M   G  P    +N +I      G++ +    F  MR   V  N+ TYN L+ G 
Sbjct: 628 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 687

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF------------ 373
            K+  +     L   M   GI P+ +T++ LI G   +G  D   +L             
Sbjct: 688 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVL 747

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           +++  NG  P    Y  LI    + G+ + A  L  EME  G    EV  + ++   +  
Sbjct: 748 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 807

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
              E A  +   M +    P + T+  L+H  C    + EA KL   M    L+ + V Y
Sbjct: 808 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 867

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
           N++I G C  G+S  A  L  EM  + L PNI +Y+  +  +       + E LL  + +
Sbjct: 868 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQE 927

Query: 554 LGL 556
            GL
Sbjct: 928 RGL 930



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 193/421 (45%), Gaps = 14/421 (3%)

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           FF +  +C      +++G L+KG C+ G+L +A + LN+L  +  + + V+Y +L+   C
Sbjct: 488 FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 547

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF-EFYEKMQLNGVSPSL 280
           K+G++  A  LF K+ +  ++   +TY+ L+ GL + G        F   M    + P+ 
Sbjct: 548 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 607

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
             Y CL+      G     F  F+EM  +    + V +N +I    +  ++ +A      
Sbjct: 608 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 667

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M+  G+ PN+ TYN L+ GF       +   L++ +   G  P  +T++ LI   SK+G 
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 727

Query: 401 SKMASDLV------------REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
             +   L+             EM E G+ P    Y  LI+   R  D++ AF++   M+ 
Sbjct: 728 PDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 787

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
            GF         ++ GL   G  ++A  + + M   +L P    +  ++  +C++     
Sbjct: 788 LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 847

Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           AL+L G M   GL  ++ +Y+  I  +C +G    A  L  +M    L P+++ Y +L  
Sbjct: 848 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 907

Query: 569 A 569
           A
Sbjct: 908 A 908



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 160/327 (48%), Gaps = 12/327 (3%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            + +LI    K G+     E +E + L G  PS+YT N ++     + +    + LF EM
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + +  NV T+N LI GLC E  +++A  LL QM+  G  P ++TYN L++ +C  G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A  L + +   G    V TYNV I        S  A  L+++M +  I+P+EVTY  L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I+ FV+   +  A ++++ M K   SP+  TY  LI G C  G+ +EA +L + M    L
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
             N+             GN   A+++   MN  G   +  + +  +  LC+DGK  EAE 
Sbjct: 405 RLNE------------HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 452

Query: 547 LLNQMLKLGLKPSVSLYNILYRAKNNI 573
            L  M ++GL P+   Y+ +     +I
Sbjct: 453 FLCHMSRIGLVPNSITYDCIINGYGSI 479



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 35/408 (8%)

Query: 40  LQHTPQSISIIL--RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQ--- 94
           L + P ++  ++   LL     S +   A  L  K++   +   S+T  SLL  L +   
Sbjct: 527 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 586

Query: 95  ------LFPSSSNPVT---KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFN 145
                 LF ++    T      +Y  ++D   K+     A ++F +M+  G  P +  FN
Sbjct: 587 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 646

Query: 146 SLLIFVIKSCS----FDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQ 200
           +    +I SCS      K   FFS  R   V  ++ ++ IL+ G  +   L +   + + 
Sbjct: 647 A----IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 702

Query: 201 LEEMGFSPNVVIYTSLIDGCCKNGD------------IERAKMLFRKIGELGLVATQHTY 248
           +   G  P+ + + SLI G  K+G             +E + ++  ++ E G++     Y
Sbjct: 703 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQY 762

Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
             LI G+ + G  +  F+  ++M+  G        + ++    + GK  +   + D M  
Sbjct: 763 ITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 822

Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
             +   + T+ TL+   C++ ++ EA +L   M++ G+  +V+ YN LI G C  G++  
Sbjct: 823 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 882

Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
           AF L+ +++     P++ TY VL+ A S A N      L+ +++ERG+
Sbjct: 883 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 930



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGI 180
           ++ A+     ML   + P   TF +L+    +     +   L      C ++LDV ++ +
Sbjct: 810 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 869

Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
           LI G C  GD   AFE+  ++      PN+  Y  L+D      ++ + + L   + E G
Sbjct: 870 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 929

Query: 241 LV----ATQH 246
           L+    +TQH
Sbjct: 930 LISWGGSTQH 939


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 165/583 (28%), Positives = 263/583 (45%), Gaps = 82/583 (14%)

Query: 38  QGLQHTPQSISIILRLLLSKMSSHSHA--AAQTLI---LKIISGRITSSSFTPRS--LLC 90
           + LQ  P       RLL   + S +HA  AA  L    L   S R+ S     R   L  
Sbjct: 47  RSLQSVPAD-----RLLSHPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVALRRPHLAA 101

Query: 91  HLTQLFPSSSNPVTKSR-LYESIIDAHLKSRLSDQALFYFHQMLDSGVR----------- 138
            L  L   ++  +   R    S++D  L S L+D+ L      LD  VR           
Sbjct: 102 SLVDLLHRAALALGPRRSALASVVDT-LLSVLADRGL------LDDAVRAVARVRELRVP 154

Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
           P + T N +L+ + +  S       F +       +V++F I+I   C+ G+L +A  + 
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLPAP---NVFTFNIVIDFLCKEGELAEARSLF 211

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
           ++++EMG  P+VV + SLIDG  K G+++  + L  ++   G  A   TY  LI    K 
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKF 271

Query: 259 GLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTY 318
           G  +  + ++  M+  GV  ++ T++  +  +C EG V E  KLF +MR R +A N  TY
Sbjct: 272 GRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTY 331

Query: 319 NTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC----------------D 362
             LI G CK  R+ +A  LLD+M   G+  NV+TY  L+DG C                 
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 363 AG-------------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
           AG                    ++KA  L +++K+ G    +  Y  LI+          
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A  L+ +M+E G+ P+ + YT ++D+  +S  + +A  M   +  SGF P+         
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN--------- 502

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
                G + EA +LFN M    +  + VVY  ++ GY K+GN + A  L  +M + GL  
Sbjct: 503 ----NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 558

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           ++  Y+  I   C     PEA  + ++M+  G+ P  ++YN L
Sbjct: 559 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 601



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 194/378 (51%), Gaps = 17/378 (4%)

Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
           +++  ++ +L E   +PNV  +  +ID  CK G++  A+ LF ++ E+G +    T+  L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
           I G  K G   +  +  E+M+ +G    + TYN LI+ +C  G++   +  F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             NVVT++T +   CKE  V+EA +L  QM++ G++ N  TY  LIDG C AG  D A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L +++   G   +VVTY VL+    K      A D++R ME+ G+  +E+ YT LI    
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
            + + EKA  + S M+  G   D+  YG LI GLC    + EA  L   M E+ LEPN +
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
           +Y  M+    K G    A+ +L ++ + G  PN             +G   EA  L N+M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEM 516

Query: 552 LKLGLKPSVSLYNILYRA 569
           +  G+    SL  ++Y A
Sbjct: 517 VHKGM----SLDKVVYTA 530



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 210/441 (47%), Gaps = 24/441 (5%)

Query: 116 HLKSRLS-DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL- 173
           H+  RL+ D++     ++ +    P   TFN ++ F+ K     +    FS  +    L 
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLP 221

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           DV +F  LI G  + G+L++  +++ ++   G   +VV Y +LI+  CK G +E A   F
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
             +   G++A   T++  +    K GL ++  + + +M++ G++ + +TY CLI   C  
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
           G++ +   L DEM  + V  NVVTY  L+ GLCKE +V EAE +L  M+ AG+  N + Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
             LI G      ++KA  L +++K+ G    +  Y  LI+          A  L+ +M+E
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP-------------------- 453
            G+ P+ + YT ++D+  +S  + +A  M   +  SGF P                    
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGM 521

Query: 454 --DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             D   Y  L+ G   +GN+ +A  L   M ++ L+ +   Y   I G+C       A  
Sbjct: 522 SLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEARE 581

Query: 512 LLGEMNEKGLVPNIASYSSTI 532
           +  EM   G+ P+ A Y+  I
Sbjct: 582 VFSEMIGHGIAPDRAVYNCLI 602



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 161/332 (48%), Gaps = 4/332 (1%)

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
           A       L+  L   GL  D      +++   V P+  T N ++     +       +L
Sbjct: 120 ALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRL 179

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
           F+++     A NV T+N +I  LCKE  + EA  L  +MK  G  P+V+T+N LIDG+  
Sbjct: 180 FEQL----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK 235

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
            GE D+  +L  +++ +G    VVTYN LI  F K G  + A      M+  G+  + VT
Sbjct: 236 CGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVT 295

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
           ++  +D+F +   + +A ++++ M+  G + + +TY  LI G C  G + +A  L + M 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
              +  N V Y +++ G CKE     A  +L  M + G+  N   Y++ I     +    
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
           +A  LL++M   GL+  +SLY  L +   N+ 
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVH 447



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 23/205 (11%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
           LY ++I  H  ++ S++AL    +M + G+    + + +L+  +      D+     ++ 
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPN----------------- 209
           +   +E +   +  ++  C ++G + +A  +L ++ + GF PN                 
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHK 519

Query: 210 -----VVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
                 V+YT+L+DG  K G++  A  L  K+ + GL      YT  I G     +  + 
Sbjct: 520 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 579

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHE 289
            E + +M  +G++P    YNCLI +
Sbjct: 580 REVFSEMIGHGIAPDRAVYNCLITQ 604


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 222/452 (49%), Gaps = 38/452 (8%)

Query: 144 FNSLLIFVIKSCSFDK-GWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
           F + LI ++K    D    LF     C    D   F +L+K   +AG + + F    Q+ 
Sbjct: 152 FLTELILLVKDTDEDVFQCLFLCCQDCN--WDPIIFDLLLKAYVKAGMIKEGFRTFMQIL 209

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
           E+G+ P+V+    L++G  K+  I     ++ ++G +G++   +T+ +L     K+G   
Sbjct: 210 EVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDID 269

Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
              +F EKM+  G  P + TYN LI+ YC  G++S+ F L+  M  R V  ++V+Y  L+
Sbjct: 270 KMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALM 329

Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
            GLCKE RV+EA +LL +M   G++P+V++YN LI G+C  G+  ++  L  ++  NG  
Sbjct: 330 NGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIF 389

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREME------------------------------ 412
           P   T  VLI+ + K G    A +LV E+E                              
Sbjct: 390 PDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTL 449

Query: 413 -----ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
                +RG  P    Y  LI+S  + D +  A  + + +     +P++ TY  LI  LC 
Sbjct: 450 LERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCR 509

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G   EA KL   M    L+P+  +   MI GYC+E ++ +A  LL    ++  + +  S
Sbjct: 510 MGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSES 569

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
           YS+ + ++C+DG   +   L  +MLK+G  P+
Sbjct: 570 YSTLVRIVCEDGDVAKFMELQERMLKVGFAPN 601



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 223/533 (41%), Gaps = 48/533 (9%)

Query: 6   QGEGQALTLNLISRM---AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHS 62
           +G    L  N ISR+    +   + A + FNW  +  L   P +++  L L +   S   
Sbjct: 88  KGLIHHLGANEISRVLLRCQSDSVSALTFFNWV-KNDLGLKPSTLNYCLILHVLAWSKEF 146

Query: 63  HAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS 122
             A + L   I+  + T         LC        + +P+    +++ ++ A++K+ + 
Sbjct: 147 EQAMKFLTELILLVKDTDEDVFQCLFLC----CQDCNWDPI----IFDLLLKAYVKAGMI 198

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
            +    F Q+L+ G  P     N LL  ++KS      W  + E  R  V  + Y+F IL
Sbjct: 199 KEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNIL 258

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY---------------------------- 213
               C+ GD++K  + L ++EE GF P++V Y                            
Sbjct: 259 THLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCV 318

Query: 214 -------TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
                  T+L++G CK G +  A  L  ++   GL     +Y  LICG  K G   +   
Sbjct: 319 LPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKS 378

Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
              +M  NG+ P  +T   LI  Y  EG +     L  E+    V+ +   Y+ L+  LC
Sbjct: 379 LLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLC 438

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
           +E R   A+ LL++M   G  P+V  YNKLI+  C       A  L  ++     +P+++
Sbjct: 439 EEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLL 498

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
           TY  LIR   + G S  A  L+ EM   G+ P       +I  + R  D  KA  +  L 
Sbjct: 499 TYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLF 558

Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
            K     D  +Y  L+  +C  G++ +  +L   M +    PN +    MI G
Sbjct: 559 AKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDG 611



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 136/284 (47%)

Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
           ++ L+  Y   G + EGF+ F ++       +V+  N L+ GL K   +     +  +M 
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244

Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
             G+ PN  T+N L   FC  G+ DK      +++  G  P +VTYN LI  +   G   
Sbjct: 245 RVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLS 304

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A  L R M  R + P  V+YT L++   +   + +A ++   M   G +PDV +Y  LI
Sbjct: 305 DAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLI 364

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
            G C +G M E+  L   M    + P+     ++I GY KEG    AL L+ E+ + G+ 
Sbjct: 365 CGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVS 424

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +   Y   +  LC++ +   A+ LL +M + G  P V +YN L
Sbjct: 425 ISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKL 468



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%)

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
           + ++ L+    K   ++E  R   Q+   G  P+VI  N L++G   +      + ++ +
Sbjct: 183 IIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGE 242

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +   G  P+  T+N+L   F K G+    +D + +MEE G  P  VTY  LI+ +     
Sbjct: 243 MGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGR 302

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
           +  AF +Y +M +    PD+ +Y  L++GLC +G ++EA +L + M    L P+ V YN 
Sbjct: 303 LSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNT 362

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I GYCKEG    +  LL EM   G+ P+  +    I    ++G    A  L+ ++ K G
Sbjct: 363 LICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFG 422

Query: 556 LKPSVSLYNIL 566
           +  S  +Y+ L
Sbjct: 423 VSISPDIYDYL 433



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 38/343 (11%)

Query: 128 YFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCC 186
           +  +M + G  P   T+N+L+  +  +    D  +L+    R  V  D+ S+  L+ G C
Sbjct: 274 FLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLC 333

Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD-IERAKMLFRKIGELGLVATQ 245
           + G + +A ++L+++   G +P+VV Y +LI G CK G  +E   +L+  IG  G+    
Sbjct: 334 KEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGN-GIFPDS 392

Query: 246 HTYTVLICGLFKNG-----------LQKDGFE------------------------FYEK 270
            T  VLI G  K G           L+K G                            E+
Sbjct: 393 FTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLER 452

Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
           M   G  P +  YN LI   C    V++   L  E+    +  N++TY  LI  LC+  R
Sbjct: 453 MSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGR 512

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
             EAE+L+++M   G+ P+      +I G+C   +  KA  L        Q     +Y+ 
Sbjct: 513 SIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYST 572

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
           L+R   + G+     +L   M + G  P+ +T   +ID   ++
Sbjct: 573 LVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKN 615



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 369 AFRLFNQLKSN-GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
           A   FN +K++ G  PS + Y +++   + +   + A   + E+             IL+
Sbjct: 113 ALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTEL-------------ILL 159

Query: 428 DSFVRSDDMEKAFE-MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
              V+  D E  F+ ++   Q   + P ++   +L+      G +KE  + F  + E   
Sbjct: 160 ---VKDTD-EDVFQCLFLCCQDCNWDPIIFD--LLLKAYVKAGMIKEGFRTFMQILEVGY 213

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ +  N ++ G  K  + +    + GEM   G++PN  +++    + C+DG   +   
Sbjct: 214 VPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMND 273

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
            L +M + G +P +  YN L
Sbjct: 274 FLEKMEEEGFEPDIVTYNTL 293



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 35/61 (57%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
            D  S+  L++  CE GD+ K  E+  ++ ++GF+PN +    +IDG  KN  + + K++
Sbjct: 565 FDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKEKLI 624

Query: 233 F 233
            
Sbjct: 625 L 625


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 231/465 (49%), Gaps = 1/465 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           SR+Y S+I A+   R  ++AL    +M + G+     T++ ++    K+ + +    +F 
Sbjct: 345 SRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFD 404

Query: 166 E-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           E  R    L+   +G +I   C+  ++ +A  ++ ++EE G    + IY +++DG     
Sbjct: 405 EAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 464

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
           D ++  ++F+++ E G   T  TY  LI    K G      E    M+  GV  +L TY+
Sbjct: 465 DEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 524

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +I+ +      +  F +F++M    +  +V+ YN +I   C    +  A + + +M+  
Sbjct: 525 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKL 584

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
              P   T+  +I+GF  +G+  ++  +F+ ++  G  P+V T+N LI    +    + A
Sbjct: 585 RHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKA 644

Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
            +++ EM   G++ +E TYT ++  +    D  KAFE ++ +Q  G   D++TY  L+  
Sbjct: 645 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKA 704

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
            C  G M+ A  +   M    +  N  VYN++I G+ + G+ + A  L+ +M ++G+ P+
Sbjct: 705 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 764

Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           I +Y+S I    + G    A   + +M  LG+KP++  Y  L + 
Sbjct: 765 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 809



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 172/371 (46%), Gaps = 7/371 (1%)

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLIC 253
           AFE +N+     F   V  Y        + GD+ RA+  F ++   G+  T   YT LI 
Sbjct: 301 AFEKINKPSRTEFGLMVKFYG-------RRGDMHRARETFERMRARGITPTSRIYTSLIH 353

Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
                   ++      KM+  G+  SL TY+ ++  +   G        FDE +      
Sbjct: 354 AYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTL 413

Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
           N   Y  +I   C+   ++ AE L+ +M+  GI   +  Y+ ++DG+    +  K   +F
Sbjct: 414 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVF 473

Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
            +LK  G +P+VVTY  LI  ++K G    A ++ R M+E G+  +  TY+++I+ FV+ 
Sbjct: 474 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 533

Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
            D   AF ++  M K G  PDV  Y  +I   C  GNM  A +    M + +  P    +
Sbjct: 534 KDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 593

Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
             +I G+ K G+  R+L +   M   G VP + ++++ I  L +  +  +A  +L++M  
Sbjct: 594 MPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTL 653

Query: 554 LGLKPSVSLYN 564
            G+  +   Y 
Sbjct: 654 AGVSANEHTYT 664



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 193/424 (45%), Gaps = 35/424 (8%)

Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
           FG+++K     GD+++A E   ++   G +P   IYTSLI       D+E A    RK+ 
Sbjct: 313 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMK 372

Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
           E G+  +  TY+V++ G  K G  +    ++++ +    + +   Y  +I+ +C    + 
Sbjct: 373 EEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 432

Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
               L  EM    +   +  Y+T++ G       ++   +  ++K  G +P V+TY  LI
Sbjct: 433 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLI 492

Query: 358 DGFCDAGETDK-----------------------------------AFRLFNQLKSNGQS 382
           + +   G+  K                                   AF +F  +   G  
Sbjct: 493 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 552

Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
           P V+ YN +I AF   GN   A   V+EM++    P+  T+  +I+ F +S DM ++ E+
Sbjct: 553 PDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEV 612

Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           + +M++ G  P V+T+  LI+GL  K  M++A ++ + M    +  N+  Y  ++ GY  
Sbjct: 613 FDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 672

Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
            G++ +A      +  +GL  +I +Y + +   C+ G+   A  +  +M    +  +  +
Sbjct: 673 VGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 732

Query: 563 YNIL 566
           YNIL
Sbjct: 733 YNIL 736



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 34/159 (21%)

Query: 98  SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
           S+ N    S +Y  +ID   +     +A     QM   GV+P  +T+ S           
Sbjct: 722 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS----------- 770

Query: 158 DKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
                                   I  C +AGD+N+A + + ++E +G  PN+  YT+LI
Sbjct: 771 -----------------------FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 807

Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
            G  +    E+A   + ++  +GL   +  Y  L+  L 
Sbjct: 808 KGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLL 846


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 230/464 (49%), Gaps = 3/464 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y ++I+   K +   +A   F +M     +P S TF++L+    K+   ++G+    E  
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           +  +E DV+ +  LI G C  GD+ +  E+ N++     +PNVV Y+ L++  CK    +
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +   +    +      YTVL  GL KNG   D  +  + M   G  P+  TYN +I
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
           +  C EG+V +   + + M  +    +VVTY+TL+ GLC   ++ EA  LL+ +  K   
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH 406

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           I P+V  +N +I   C       A R++  +   G   ++VTYN+LI  +  AG    A 
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKAL 466

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L ++  + GI+P+  TYT+LI+   +   +  A  +++  + SG  P V  Y  L+  L
Sbjct: 467 ELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C + ++++A  LF  M     +P+ V +N++I G  K G+   A  LL EM    LVP+ 
Sbjct: 527 CRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDN 586

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
            ++S  I    + G+  EA  L  +M+  G  P   L++ L + 
Sbjct: 587 ITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 224/499 (44%), Gaps = 84/499 (16%)

Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
           K++ Y+ +I  H  S+++  ++F     L + +    NT      F +      +G+   
Sbjct: 71  KAKHYDHVISVH--SKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGF--- 125

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
                   L+VY+F +L+KG C++GD +KA ++   ++     P+ V Y ++I+G CK  
Sbjct: 126 -------HLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGK 178

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            +  AK                                   E +++M+     P+  T++
Sbjct: 179 RLVEAK-----------------------------------ELFKEMKGGECKPNSVTFS 203

Query: 285 CLIHEYCNEGKVSEGF-----------------------------------KLFDEMRHR 309
            LI  +C  G V EGF                                   +LF+EM  +
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263

Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
            V  NVVTY+ L+  LCK+ + +EA ++LD M    + P+V+ Y  L DG    G    A
Sbjct: 264 NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDA 323

Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
            ++ + +   G+ P+ VTYN +I    K G    A  ++  M ++G  P  VTY+ L+  
Sbjct: 324 IKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKG 383

Query: 430 FVRSDDMEKAFEMYSLMQKSGF--SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
                 +++A ++ +L+    F   PDV+ + ++I  LC +  ++ A +++ +M E    
Sbjct: 384 LCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFP 443

Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
            N V YN++I GY   G   +AL L  +  + G+ PN A+Y+  I  LC+      A+ L
Sbjct: 444 SNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGL 503

Query: 548 LNQMLKLGLKPSVSLYNIL 566
            N+    G +P+VS YN L
Sbjct: 504 FNKKRASGTRPTVSEYNTL 522



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 208/423 (49%), Gaps = 3/423 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSENRCKVELDVYSFGILIKGCCE 187
           F++ML   V P   T++ L+  + K   + +   +  +   CKV  DV ++ +L  G  +
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
            G  + A +VL+ + + G  PN V Y ++I+G CK G ++ A  +   + + G      T
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLN--GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
           Y+ L+ GL   G   +  +    +      + P ++ +N +I E C + ++    +++  
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  R    N+VTYN LI G     ++ +A  L      +GISPN  TY  LI+G C    
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
              A  LFN+ +++G  P+V  YN L+ +  +  + + A +L +EM      P  V++ I
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           +ID  +++ D+E A E+   M      PD  T+ +LI+     G + EA+ L+  M    
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P+ V+++ ++ GY  +G + + + +L +M +K +V +    S+ +  LC   K  + E
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIE 676

Query: 546 VLL 548
            +L
Sbjct: 677 KIL 679



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 155/302 (51%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           + KM    V P   + + LI  + N  K S  F +   +  R    NV  +N L+ G C+
Sbjct: 82  HSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQ 141

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
                +A  L   MK   + P+ ++YN +I+G C      +A  LF ++K     P+ VT
Sbjct: 142 SGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVT 201

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           ++ LI  F K G+ +    L+ EME+ G+      Y+ LI  F    D+E+  E+++ M 
Sbjct: 202 FSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEML 261

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
           +   +P+V TY  L++ LC K   KEA+++ ++M   K+ P+ V Y ++  G  K G + 
Sbjct: 262 RKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRAS 321

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
            A+++L  M ++G  PN  +Y++ I  LC++G+  +A  +L  M K G KP V  Y+ L 
Sbjct: 322 DAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLV 381

Query: 568 RA 569
           + 
Sbjct: 382 KG 383



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 109/222 (49%)

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+  + N LID    A   D    + +++ S    P   + + LI +F        A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           +  + +RG   +   + +L+  F +S D  KA +++ +M+++   PD  +Y  +I+GLC 
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
              + EA +LF  M   + +PN V ++ +I G+CK G+      LL EM + GL  ++  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           YS+ I   C  G     + L N+ML+  + P+V  Y+ L  A
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNA 278


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 218/493 (44%), Gaps = 31/493 (6%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           R+Y  ++DA L+  L    +  +  M  +GV P   T+N L+  + ++           E
Sbjct: 128 RVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDE 187

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKA------------------------------F 195
             R     D  S   +I   C+   L++A                              F
Sbjct: 188 MARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVF 247

Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
            V++++   G  P+ V YTS++   CK  ++  A  +  ++   G V    T+TVL+ G 
Sbjct: 248 LVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGF 307

Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNV 315
           F +G   D    +  M   G +PS  +YN LI   C+ G +     +F  M   +   +V
Sbjct: 308 FDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDV 367

Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
            TY+TLI G  K   +  A  + + M  AG  PNV+ Y  ++D  C     D+A  L ++
Sbjct: 368 RTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDK 427

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
           +      P+ +T+N LIR+    G +  A ++   M   G  P++ TY  L+    R  +
Sbjct: 428 MSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGN 487

Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
            E A  M + M   GF   + +Y   I GLC    +KEA  L   M    ++P+   +N 
Sbjct: 488 CEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNA 547

Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
           +I  YCKEGN   A  +LG M+      NI +Y+S +  LC   K  +A V L +ML  G
Sbjct: 548 IIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607

Query: 556 LKPSVSLYNILYR 568
           + P+ + +N+L R
Sbjct: 608 ICPNEATWNVLVR 620



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 8/462 (1%)

Query: 111 SIIDAHLKSRLSDQALFYFHQML-DSG-VRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           + I A  ++  +D+AL  F++   D G   P    +N LL  +++          +   R
Sbjct: 95  AAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMR 154

Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              VE +VY++ +LIK  C+   +  A  +L+++   G  P+ V +T++I   CK   ++
Sbjct: 155 KAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLD 214

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A+ +  ++  +G  A+ +     +CG F+    ++ F   ++M   G+ P    Y  ++
Sbjct: 215 EARGILAEMTPVG--ASYNAVVHALCGQFR---MREVFLVVDEMVHRGLRPDTVAYTSIV 269

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             +C   ++     +   M       NV T+  L+ G   + +V +A  + + M   G +
Sbjct: 270 GAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWA 329

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+ I+YN LI G C  G+  +A  +F+ +  +   P V TY+ LI  FSKAG+  +A  +
Sbjct: 330 PSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSI 389

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             +M   G  P+ V YT ++D   +    ++A  +   M      P+  T+  LI  LC 
Sbjct: 390 WNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCD 449

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G    A  +F+ M      PND  YN ++ G  +EGN   ALR+L EM   G   ++ S
Sbjct: 450 LGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVS 509

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           Y++TI  LCQ     EA +LL +M+  G++P    +N +  A
Sbjct: 510 YNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHA 551



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 185/384 (48%), Gaps = 7/384 (1%)

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA-KMLFRKIGELGLVA-TQ 245
           AGDL+     L ++   G +       + I    + G  +RA K  +R   +LG  A T 
Sbjct: 68  AGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTV 127

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             Y  L+  L +  L       Y+ M+  GV P++YTYN LI   C   +V    ++ DE
Sbjct: 128 RVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDE 187

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           M  +    + V++ T+I  LCK  R+ EA  +L +M   G S     YN ++   C    
Sbjct: 188 MARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHALCGQFR 242

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
             + F + +++   G  P  V Y  ++ AF KA   +MA  ++  M   G  P+  T+T+
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           L+  F     +  A  M++ M   G++P   +Y VLI GLC  G++K A  +F+ M ++ 
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P+   Y+ +I G+ K G+   A+ +  +M   G  PN+  Y++ + VLC+   + +AE
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAE 422

Query: 546 VLLNQMLKLGLKPSVSLYNILYRA 569
            L+++M      P+   +N L R+
Sbjct: 423 NLIDKMSLENCPPNTLTFNTLIRS 446



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 12/427 (2%)

Query: 81  SSFTPRSLLCHLTQL-----FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDS 135
           S  T  S LC L +L       +   PV  S  Y +++ A        +      +M+  
Sbjct: 199 SHTTIISALCKLDRLDEARGILAEMTPVGAS--YNAVVHALCGQFRMREVFLVVDEMVHR 256

Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVE---LDVYSFGILIKGCCEAGDLN 192
           G+RP +  + S++    K+          +  R   E    +V +F +L+KG  + G ++
Sbjct: 257 GLRPDTVAYTSIVGAFCKARELRMACAILA--RMVTEGCVPNVQTFTVLVKGFFDDGKVH 314

Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
            A  + N +   G++P+ + Y  LI G C  GD++RA  +F  +G+   +    TY+ LI
Sbjct: 315 DALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLI 374

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G  K G        +  M   G  P++  Y  ++   C +    +   L D+M      
Sbjct: 375 DGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCP 434

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            N +T+NTLI  LC   R   A  +   M+  G  PN  TYN+L+ G    G  + A R+
Sbjct: 435 PNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRM 494

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
             ++ ++G   S+V+YN  I    +    K A  L+  M  +GI P   T+  +I ++ +
Sbjct: 495 LTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCK 554

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
             ++  A  M   M       ++  Y  L+ GLC +  + +A      M    + PN+  
Sbjct: 555 EGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEAT 614

Query: 493 YNMMIFG 499
           +N+++ G
Sbjct: 615 WNVLVRG 621



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 25/370 (6%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI+ A  K+R    A     +M+  G  P   TF  L+          KG  FF + +
Sbjct: 265 YTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLV----------KG--FFDDGK 312

Query: 169 CKVELDVY-------------SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTS 215
               L ++             S+ +LI+G C  GDL +A  V + + +    P+V  Y++
Sbjct: 313 VHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYST 372

Query: 216 LIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNG 275
           LIDG  K GD++ A  ++  +   G       YT ++  L K  +        +KM L  
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN 432

Query: 276 VSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
             P+  T+N LI   C+ G+      +F  MR      N  TYN L+ GL +E   ++A 
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R+L +M   G   ++++YN  I G C      +A  L  ++   G  P   T+N +I A+
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K GN + A+ ++  M+      + V YT L+        ++ A      M   G  P+ 
Sbjct: 553 CKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNE 612

Query: 456 YTYGVLIHGL 465
            T+ VL+ G+
Sbjct: 613 ATWNVLVRGI 622



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 119/316 (37%), Gaps = 79/316 (25%)

Query: 89  LCHLTQLFPS--------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
           LCH+  L  +         S+ +   R Y ++ID   K+   D A+  ++ M ++G +P 
Sbjct: 342 LCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPN 401

Query: 141 SNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLN 199
              + +++  + K   FD+      +   +    +  +F  LI+  C+ G   +A  V +
Sbjct: 402 VVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFH 461

Query: 200 QLEEMGFSPN-----------------------------------VVIYTSLIDGCCKNG 224
            +   G  PN                                   +V Y + I G C+  
Sbjct: 462 GMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMR 521

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ A +L      LG                             +M + G+ P  +T+N
Sbjct: 522 MIKEAMIL------LG-----------------------------RMIIQGIQPDAFTFN 546

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            +IH YC EG V     +   M       N+V Y +L+ GLC + ++ +A   L +M   
Sbjct: 547 AIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYE 606

Query: 345 GISPNVITYNKLIDGF 360
           GI PN  T+N L+ G 
Sbjct: 607 GICPNEATWNVLVRGI 622



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 42/214 (19%)

Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGI------------------------------ 416
            +   +R  + AG+       ++EM  RG+                              
Sbjct: 57  AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116

Query: 417 -------TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
                   P+   Y  L+D+ +R + +     +Y  M+K+G  P+VYTY +LI  LC   
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQND 176

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
            +  A ++ + M      P++V +  +I   CK      A  +L EM   G     ASY+
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG-----ASYN 231

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
           + +  LC   +  E  +++++M+  GL+P    Y
Sbjct: 232 AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAY 265


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 228/482 (47%), Gaps = 47/482 (9%)

Query: 121 LSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSF 178
           L D+AL  F ++ +    P     N++L  ++K+    + W  F E   R  V   V ++
Sbjct: 121 LPDEALSVFGRLRELPALP---ACNAILDGLVKAHMLARVWELFDEMLGRGMVP-SVVTY 176

Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
             LI  C   GD+ KA+EV +Q+      PNVV YT++I   C+   I  A+ LF ++ E
Sbjct: 177 NTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKE 236

Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
            G+    +TY  L+   FK    K    FY  +   G+ P+   +  LI   C   +++E
Sbjct: 237 AGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITE 296

Query: 299 GFKLFDEMRHREVACNVVTYNTLI------------------------------C----- 323
              +F +M   EVA  V  YN+LI                              C     
Sbjct: 297 AKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVR 356

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLC   ++Q A R L+ M+ +GI+ N   YN LID +C +G  D+A     ++   G  P
Sbjct: 357 GLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEP 416

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
           +VVTY+ LI   SK G  ++A  +  EM  +G+ P+ VTYT LI    ++ DM+ AF + 
Sbjct: 417 NVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQ 476

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL---FNSMWETKLEP---NDVVYNMMI 497
             M++ G   +  T  VL+ GLC +  +++A +    ++   +++  P   N V Y  +I
Sbjct: 477 KEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLI 536

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           +G   +G    A      M + G+VP+  +Y+  I  LC  G    A +L   M+K+G+K
Sbjct: 537 YGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVK 596

Query: 558 PS 559
           P+
Sbjct: 597 PT 598



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 208/423 (49%), Gaps = 7/423 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIK-SCSFDKGWLFFSEN 167
           Y ++I+A        +A   + QM+   + P   T+ +++  + +  C  D   LF    
Sbjct: 176 YNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMK 235

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++Y++  L+    +  ++  A      L + G  PN VI+T+LIDG C+   I 
Sbjct: 236 EAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRIT 295

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            AK +F  +    +  T   Y  LI G F++G  ++   F++++   G+ P  +T + ++
Sbjct: 296 EAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVV 355

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
              C+ G++    +  + M+   +A N   YN LI   CK   + EA     +M   G+ 
Sbjct: 356 RGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVE 415

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PNV+TY+ LIDG    GE + A  ++ ++ + G  P+VVTY  LI   +K G+   A  L
Sbjct: 416 PNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWL 475

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM---YSLMQKSGFSPDV---YTYGVL 461
            +EMEE+GI  + +T ++L+D   R + ++ A      YS  +KS  +P +    TY  L
Sbjct: 476 QKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTL 535

Query: 462 IHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGL 521
           I+GL + G   EA   F+ M ++ + P+   Y ++I G C  G    A+ L  +M + G+
Sbjct: 536 IYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGV 595

Query: 522 VPN 524
            P 
Sbjct: 596 KPT 598



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 7/325 (2%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    ++ ++ID   ++    +A   F  M    V P    +NSL+    +S    +   
Sbjct: 275 VPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALA 334

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           FF E  R  +  D ++  I+++G C+ G +  A   L  +++ G + N   Y  LID  C
Sbjct: 335 FFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYC 394

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K+G+++ A +   ++ E+G+     TY+ LI G  KNG  +     Y +M   GV P++ 
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 454

Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ- 340
           TY  LIH +   G +   F L  EM  + +  N +T + L+ GLC+E RVQ+A R + + 
Sbjct: 455 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 514

Query: 341 --MKMAGISP---NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
              K +  +P   N +TY  LI G    G+ ++A   F+ ++ +G  P   TY ++IR  
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 396 SKAGNSKMASDLVREMEERGITPSE 420
              G    A  L  +M + G+ P++
Sbjct: 575 CMLGYVLNAMMLYADMVKVGVKPTK 599


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 172/320 (53%)

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
           TY  LI GL K G      E   +MQ+ G  P++ TY  LI  +C EG++ E   + DEM
Sbjct: 16  TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
             + +A N V YN LI  LCK+ +VQ+A  +   M   G  P++ T+N LI G C   + 
Sbjct: 76  SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 135

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
           ++A  L+  +   G   + +TYN LI AF + G  + A  LV +M  RG    ++TY  L
Sbjct: 136 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 195

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  R+ ++EK   ++  M   G +P+  +  +LI+GLC  GN++ A +    M    L
Sbjct: 196 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 255

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+ V YN +I G CK G +  AL L  ++  +G+ P+  +Y++ I   C++G + +A +
Sbjct: 256 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 315

Query: 547 LLNQMLKLGLKPSVSLYNIL 566
           LL++ +  G  P+   + IL
Sbjct: 316 LLSRGVDSGFIPNEVTWYIL 335



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 173/332 (52%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D++++  LI G C+ G L  A E++N+++  G  PNV+ YT LID  CK G +E A+ + 
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++   GL      Y  LI  L K+   +D    +  M   G  P ++T+N LI   C  
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            K  E   L+ +M    V  N +TYNTLI    +   +QEA +L++ M   G   + ITY
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N LI   C AG  +K   LF  + S G +P+ ++ N+LI    + GN + A + +R+M  
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
           RG+TP  VTY  LI+   ++   ++A  ++  +Q  G  PD  TY  LI   C +G   +
Sbjct: 253 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 312

Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           A  L +   ++   PN+V + +++  + KEG+
Sbjct: 313 AHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 172/336 (51%)

Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
           +G  P++  Y +LI G CK G +  A+ L  ++   G      TYT+LI    K G  ++
Sbjct: 8   VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67

Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
                ++M   G++ +   YNCLI   C + KV +   +F +M  +    ++ T+N+LI 
Sbjct: 68  ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127

Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP 383
           GLCK  + +EA  L   M + G+  N ITYN LI  F   G   +A +L N +   G   
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187

Query: 384 SVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMY 443
             +TYN LI+A  +AGN +    L  +M  +G+ P+ ++  ILI+   R+ +++ A E  
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247

Query: 444 SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKE 503
             M   G +PD+ TY  LI+GLC  G  +EA  LF+ +    + P+ + YN +I  +CKE
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307

Query: 504 GNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
           G    A  LL    + G +PN  ++   +    ++G
Sbjct: 308 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%)

Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
           +E M   G  P ++TYN LI   C +G +    +L +EM+ +    NV+TY  LI   CK
Sbjct: 2   HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 61

Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
           E R++EA  +LD+M   G++ N + YN LI   C   +   A  +F  + S G  P + T
Sbjct: 62  EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121

Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
           +N LI    K    + A  L ++M   G+  + +TY  LI +F+R   M++A ++ + M 
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181

Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
             G   D  TY  LI  LC  GN+++   LF  M    L PN++  N++I G C+ GN  
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241

Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            AL  L +M  +GL P+I +Y+S I  LC+ G+  EA  L +++   G+ P    YN L
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 164/342 (47%), Gaps = 1/342 (0%)

Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGD 190
           ML  G  P   T+N+L++ + K           +E + K  E +V ++ ILI   C+ G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
           L +A  VL+++   G + N V Y  LI   CK+  ++ A  +F  +   G      T+  
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI GL K    ++    Y+ M L GV  +  TYN LIH +   G + E  KL ++M  R 
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
              + +TYN LI  LC+   +++   L + M   G++PN I+ N LI+G C  G    A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
                +   G +P +VTYN LI    K G ++ A +L  +++  GI P  +TY  LI   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
            +    + A  + S    SGF P+  T+ +L+     +G+ +
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 94/192 (48%)

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
           S G  P + TYN LI    K G    A +L+ EM+ +G  P+ +TYTILID F +   +E
Sbjct: 7   SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 66

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A  +   M   G + +   Y  LI  LC    +++A  +F  M     +P+   +N +I
Sbjct: 67  EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 126

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           FG CK      AL L  +M  +G++ N  +Y++ I    + G   EA  L+N ML  G  
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186

Query: 558 PSVSLYNILYRA 569
                YN L +A
Sbjct: 187 LDDITYNGLIKA 198



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 1/193 (0%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           +  +  Y ++I A L+     +AL   + ML  G      T+N L+  + ++ + +KG  
Sbjct: 151 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 210

Query: 163 FFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
            F +   K +  +  S  ILI G C  G++  A E L  +   G +P++V Y SLI+G C
Sbjct: 211 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 270

Query: 222 KNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
           K G  + A  LF K+   G+     TY  LI    K G+  D      +   +G  P+  
Sbjct: 271 KTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 330

Query: 282 TYNCLIHEYCNEG 294
           T+  L+  +  EG
Sbjct: 331 TWYILVSNFIKEG 343


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 215/442 (48%), Gaps = 4/442 (0%)

Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIK 183
           AL     M  +GV P  +  N+ +  ++K    +K   F    +   ++ D+ ++  LIK
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313

Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK-IGELGLV 242
           G C+   +  A E++  L   G  P+ V Y +++   CK   IE  K L  K +    L+
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373

Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
             Q TY  LI  L K+G   D   F ++ Q  G       Y+ ++H +C +G++ E   L
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433

Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
             +M  R    +VVTY  ++ G C+  R+ EA+++L QM   G  PN ++Y  L++G C 
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493

Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
           +G++ +A  + N  + +  +P+ +TY  ++    + G    A DL REM E+G  P+ V 
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553

Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
             +LI S  ++  + +A +        G + +V  +  +IHG C  G+M+ A  + + M+
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613

Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
            +   P+ V Y  +     K+G    A  L+ +M  KGL P   +Y S I    Q G+  
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVD 673

Query: 543 EAEVLLNQMLKLGLKPSVSLYN 564
           +   LL +MLK   +P  ++YN
Sbjct: 674 DMLNLLEKMLK--RQPFRTVYN 693



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 227/467 (48%), Gaps = 11/467 (2%)

Query: 96  FPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKS 154
            PS   P  K   Y +++    K +  ++      +M+ +S + P   T+N+L+  + K 
Sbjct: 331 LPSKGCPPDKVSYY-TVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKH 389

Query: 155 CSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
              D    F  E + K   +D   +  ++   C+ G +++A  ++  +   G +P+VV Y
Sbjct: 390 GHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTY 449

Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
           T+++DG C+ G I+ AK + +++ + G      +YT L+ GL  +G   +  E     + 
Sbjct: 450 TAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE 509

Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
           +  +P+  TY  ++H    EGK+SE   L  EM  +      V  N LI  LC+  +V E
Sbjct: 510 HWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE 569

Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
           A++ L++    G + NV+ +  +I GFC  G+ + A  + + +  +G+ P  VTY  L  
Sbjct: 570 AKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFD 629

Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV---RSDDMEKAFEMYSLMQKSG 450
           A  K G    A++L+ +M  +G+ P+ VTY  +I  +    R DDM    E   ++++  
Sbjct: 630 ALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE--KMLKRQP 687

Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
           F      Y  +I  LC  GN++EA KL   +  T  + +    ++++  Y K+G +  A 
Sbjct: 688 FRT---VYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAY 744

Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
           ++   M  + L P++         L  DGK  EA+ L+ + ++ G++
Sbjct: 745 KVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 177/390 (45%), Gaps = 36/390 (9%)

Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
            R  +E    +FG ++     AG L  A  VL  +++ G  P++ I  + I    K G +
Sbjct: 227 TRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKL 286

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A                                    +F E+MQ+ G+ P + TYN L
Sbjct: 287 EKA-----------------------------------LKFLERMQVTGIKPDIVTYNSL 311

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM-AG 345
           I  YC+  ++ +  +L   +  +    + V+Y T++  LCKE +++E + L+++M   + 
Sbjct: 312 IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSN 371

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + P+ +TYN LI      G  D A     + +  G     V Y+ ++ +F + G    A 
Sbjct: 372 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAK 431

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
            LV +M  RG  P  VTYT ++D F R   +++A ++   M K G  P+  +Y  L++GL
Sbjct: 432 SLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGL 491

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C  G   EA ++ N   E    PN + Y  ++ G  +EG    A  L  EM EKG  P  
Sbjct: 492 CHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTP 551

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
              +  I  LCQ+ K  EA+  L + L  G
Sbjct: 552 VEINLLIQSLCQNQKVVEAKKYLEECLNKG 581



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 176/365 (48%), Gaps = 1/365 (0%)

Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
           +S + V+Y +++D   K    + A+ + R +   G+      +  ++    + G  ++  
Sbjct: 196 YSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNAL 255

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
                MQ  GV PSL   N  I+     GK+ +  K  + M+   +  ++VTYN+LI G 
Sbjct: 256 RVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGY 315

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPS 384
           C   R+++A  L+  +   G  P+ ++Y  ++   C   + ++   L  ++  N    P 
Sbjct: 316 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPD 375

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            VTYN LI   SK G++  A   ++E +++G    +V Y+ ++ SF +   M++A  +  
Sbjct: 376 QVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 435

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G +PDV TY  ++ G C  G + EA K+   M++   +PN V Y  ++ G C  G
Sbjct: 436 DMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSG 495

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
            S  A  ++    E    PN  +Y + +  L ++GK  EA  L  +M++ G  P+    N
Sbjct: 496 KSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEIN 555

Query: 565 ILYRA 569
           +L ++
Sbjct: 556 LLIQS 560


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 239/467 (51%), Gaps = 11/467 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKG---WLFF 164
           Y  +ID   K     Q    + +++  S V P   T+N ++  + K   FD+    W   
Sbjct: 222 YNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERM 281

Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
            +N C  E+D++++  LI G C+ G+++ A EV  ++ +     +VV Y +L++G C+ G
Sbjct: 282 KKNEC--EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAG 339

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            I+ +  L+  +G+        +Y + I GLF+N   ++    +E ++  G      TY 
Sbjct: 340 KIKESFELWVMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            LIH  C  G +++  K+  E +      +   Y++++ GL K+ RV EA  ++ QM   
Sbjct: 399 VLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458

Query: 345 G--ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
           G  +SP+V   N LI+GF  A + ++A   F ++++ G SP+VV+YN LI    KA    
Sbjct: 459 GCELSPHVC--NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFS 516

Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
            A   V+EM E+   P  +TY++L+D   +   ++ A  ++  +   G  PDV  + +L+
Sbjct: 517 DAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILM 576

Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
           HGLC  G +++A  L+++M ++   PN V +N ++ G  K      A  +   M + G  
Sbjct: 577 HGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQ 636

Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           P+I SY+ T+  LC  G+  +   L +  LK G+ P+   + IL RA
Sbjct: 637 PDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRA 683



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 180/385 (46%), Gaps = 6/385 (1%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG---WLFFSENRCKVELDVYSFG 179
           D A+  + +M+   V     T+N+LL    ++    +    W+   +  C    +V S+ 
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH---NVVSYN 363

Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
           I I+G  E   + +A  V   L   G   +   Y  LI G CKNG + +A  + ++  + 
Sbjct: 364 IFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDG 423

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G       Y+ ++ GL K G   +      +M   G   S +  N LI+ +    K+ E 
Sbjct: 424 GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEA 483

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
              F EM  +  +  VV+YNTLI GLCK  R  +A   + +M      P++ITY+ L+DG
Sbjct: 484 ICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDG 543

Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
            C   + D A  L+ Q+   G  P V  +N+L+     AG  + A  L   M++    P+
Sbjct: 544 LCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPN 603

Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
            VT+  L+D   ++ + E A  +++ M K+GF PD+ +Y + + GLC  G + +   LF+
Sbjct: 604 LVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFD 663

Query: 480 SMWETKLEPNDVVYNMMIFGYCKEG 504
              +  + P  + + +++    K G
Sbjct: 664 DALKNGILPTSITWYILVRAVLKLG 688



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 155/302 (51%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++G+LI G C+ G LNKA ++L + ++ G   +   Y+S++DG  K G ++ A  + 
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++ + G   + H    LI G  +    ++   F+ +M+  G SP++ +YN LI+  C  
Sbjct: 453 HQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKA 512

Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
            + S+ +    EM  ++   +++TY+ L+ GLC+  ++  A  L  Q+ + G+ P+V  +
Sbjct: 513 ERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572

Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
           N L+ G C AG+ + A  L++ +K +   P++VT+N L+    KA   +MAS +   M +
Sbjct: 573 NILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFK 632

Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
            G  P  ++Y I +        +     ++    K+G  P   T+ +L+  +   G +  
Sbjct: 633 NGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692

Query: 474 AS 475
            S
Sbjct: 693 LS 694



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 202/408 (49%), Gaps = 9/408 (2%)

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM-GFSPNVVIYTSLIDGCCKNGDI 226
           +CK   DV     ++K   ++   N+A +   ++EE+ G  P +  Y +L++   +   +
Sbjct: 73  KCKCTEDVVL--TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLL 130

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E+A+        +G++    TY +LI    K     +     + M    + P +Y+Y  +
Sbjct: 131 EKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTV 190

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAG 345
           I+     G +    ++FDEM  R +  +V+ YN +I G  K     + + + +++ K + 
Sbjct: 191 INGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSC 250

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           + PNV+TYN +I+G C  G  D++  ++ ++K N     + TY+ LI      GN   A 
Sbjct: 251 VYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAV 310

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           ++ +EM +R +    VTY  L++ F R+  ++++FE++ +M K     +V +Y + I GL
Sbjct: 311 EVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGL 369

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
                ++EA  ++  +       +   Y ++I G CK G+  +AL++L E  + G   + 
Sbjct: 370 FENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDA 429

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLG--LKPSV--SLYNILYRA 569
            +YSS +  L + G+  EA  +++QM K G  L P V   L N   RA
Sbjct: 430 FAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRA 477



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 36/292 (12%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y SI+D   K    D+AL   HQM   G     +  N L+   +++   ++   FF E  
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREME 491

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            K     V S+  LI G C+A   + A+  + ++ E  + P+++ Y+ L+DG C+   I+
Sbjct: 492 TKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKID 551

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  L+R++   GL      + +L+ GL   G  +D    Y  M+ +   P+L T     
Sbjct: 552 MALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVT----- 606

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
                                         +NTL+ GL K    + A  +   M   G  
Sbjct: 607 ------------------------------HNTLMDGLYKARECEMASVIWACMFKNGFQ 636

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG 399
           P++I+YN  + G C  G       LF+    NG  P+ +T+ +L+RA  K G
Sbjct: 637 PDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 238/496 (47%), Gaps = 39/496 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +IDA   +R  D A+  F +M  S  +P   T+ +LL         DK    ++E  
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361

Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
                 DV +F IL+   C+AG +N+AF++L+ + + G  PN+  Y +LI G  +   ++
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  LF  +  LG+  T +TY +LI    K+G      E +EKM+  G++P++   N  +
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
           +     G++ E   +F+E++   +A + VTYN ++    K  +V EA +LL +M      
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           P+VI  N LID    AG  ++A+++F +++    +P+VVTYN+L+    K G  + A  L
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
              M   G +P+ +T+  L+D   ++D+++ A +M+  M      PDV T+  +IHG   
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL-------------- 513
           +  +K A  LF+ M +  L P+ V    ++ G  K G    A R+               
Sbjct: 662 QNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS 720

Query: 514 -------GEMNEKG---------------LVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
                  G + E G               +  + +     I VLC+  K   A  +  + 
Sbjct: 721 FWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKF 780

Query: 552 LK-LGLKPSVSLYNIL 566
            K LG+KP++ +YN+L
Sbjct: 781 TKELGVKPTLKVYNLL 796



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 37/480 (7%)

Query: 124 QALFYFHQMLD-SGVRPRSNTFNSLL-IFVIKSCSFDKGWLFFSENRCKVELDVYSFGIL 181
            ALFYF  + +   V   + T N +L I  +     D  ++F    R  +  +V ++ I+
Sbjct: 106 HALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLII 165

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
            K     G L +A   L ++ E GF  N   Y  LI    ++G  + A  ++R++   GL
Sbjct: 166 FKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGL 225

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
             +  T++ L+    K    K      E+M+  G+ P++YTY   I     +GK+ E ++
Sbjct: 226 KPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYR 285

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           +   M       +VVTY  LI  LC   ++ +A  L  +MK +   P+ +TY  L+D F 
Sbjct: 286 IMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFS 345

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
           D G  DK  +++ +++++G +P VVT+ +L+ A  KAG    A DL+  M ++G+ P+  
Sbjct: 346 DCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLH 405

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI--HG--------------- 464
           TY  LI   +R++ ++ A +++S M+  G  P  YTY +LI  HG               
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM 465

Query: 465 ------------------LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
                             L   G + EA  +FN +  + L P+ V YNMM+  Y K G  
Sbjct: 466 KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQV 525

Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             A++LL EM++    P++   +S I  L + G+  EA  +  +M ++ L P+V  YNIL
Sbjct: 526 DEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNIL 585



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 234/510 (45%), Gaps = 47/510 (9%)

Query: 99   SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
            SS     S  Y  ++  + K    D+A+    +M      P     NSL+  + K+   +
Sbjct: 502  SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561

Query: 159  KGWLFFSENRCKVE-----LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
            + W  F    C++E       V ++ IL+ G  + G + KA ++   +   G SPN + +
Sbjct: 562  EAWQMF----CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 214  TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
             +L+D  CKN +++ A  +F K+  +       T+  +I G  K    K+    + +M+ 
Sbjct: 618  NTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK- 676

Query: 274  NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR-----------EVACNVVTY---- 318
              + P   T   L+      G++ + F++ ++  ++           +V   ++T     
Sbjct: 677  KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTE 736

Query: 319  ------NTLICG---------------LCKEMRVQEAERLLDQM-KMAGISPNVITYNKL 356
                    L+C                LCK  +   A  +  +  K  G+ P +  YN L
Sbjct: 737  KAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLL 796

Query: 357  IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
            IDGF +    + A+ LF ++KS G +P   TYN LI A  K+G      DL  EM  RG 
Sbjct: 797  IDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGC 856

Query: 417  TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
             P+ +TY ++I + V+S+ ++KA ++Y  +    FSP   T+G LI GL   G + +A +
Sbjct: 857  KPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHE 916

Query: 477  LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
            +F+ M      PN  +YN+++ GY K G+   A      M ++G+ P++ SY+  + +LC
Sbjct: 917  MFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILC 976

Query: 537  QDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
              G+  +A     ++ + GL P +  YN++
Sbjct: 977  IAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 190/377 (50%)

Query: 197 VLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
           V + ++      NV  Y  +       G + +A     K+ E G V   ++Y  LI  L 
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
           ++G  K+  E Y +M   G+ PSL T++ L+        +     L +EM    +  N+ 
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
           TY   I  L ++ ++ EA R++ +M   G  P+V+TY  LID  C A + D A  LF ++
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
           KS+   P  VTY  L+  FS  G+      +  EME  G  P  VT+TIL+++  ++  +
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
            +AF++   M+K G  P+++TY  LI GL     + +A  LF++M    +EP    Y ++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 497 IFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
           I  + K G+  +AL    +M  +G+ PNI + ++++  L + G+  EA+ + N++   GL
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505

Query: 557 KPSVSLYNILYRAKNNI 573
            P    YN++ +  + +
Sbjct: 506 APDSVTYNMMMKCYSKV 522



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 211/423 (49%), Gaps = 2/423 (0%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV-ELDVYSFGIL 181
           D+A     +M D G  P   T+  L+  +  +   D     F++ +    + D  ++  L
Sbjct: 281 DEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTL 340

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +    + G L+K  ++  ++E  G++P+VV +T L++  CK G I  A  L   + + G+
Sbjct: 341 LDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           +   HTY  LI GL +     D  + +  M+  GV P+ YTY  LI  +   G   +  +
Sbjct: 401 LPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALE 460

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            F++M+ R +A N+V  N  +  L +  R+ EA+ + +++K +G++P+ +TYN ++  + 
Sbjct: 461 TFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520

Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
             G+ D+A +L +++      P V+  N LI    KAG  + A  +   MEE  + P+ V
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVV 580

Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
           TY IL+    +   ++KA +++  M   G SP+  T+  L+  LC    +  A K+F  M
Sbjct: 581 TYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKM 640

Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
                 P+ + +N +I G+ K+     A+ L  +M +K L P+  +  + +  + + G+ 
Sbjct: 641 TTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQI 699

Query: 542 PEA 544
            +A
Sbjct: 700 EDA 702



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 232/494 (46%), Gaps = 36/494 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           Y  +I   L+S    +AL  + +M+  G++P   TF++L++   K  +         E  
Sbjct: 197 YNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
              +  ++Y++ I I+     G +++A+ ++ ++++ G  P+VV YT LID  C    ++
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLD 316

Query: 228 RAKMLFRKI----------------------GEL-------------GLVATQHTYTVLI 252
            A  LF K+                      G L             G      T+T+L+
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
             L K G   + F+  + M+  GV P+L+TYN LI       ++ +   LF  M    V 
Sbjct: 377 NALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
               TY  LI    K     +A    ++MK  GI+PN++  N  +    + G   +A  +
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAM 496

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           FN+LKS+G +P  VTYN++++ +SK G    A  L+ EM +    P  +    LID+  +
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
           +  +E+A++M+  M++   +P V TY +L+ GL  +G +++A +LF SM      PN + 
Sbjct: 557 AGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTIT 616

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N ++   CK      AL++  +M      P++ ++++ I    +  +   A  L +QM 
Sbjct: 617 FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676

Query: 553 KLGLKPSVSLYNIL 566
           KL     V+L  +L
Sbjct: 677 KLLRPDHVTLCTLL 690



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 223/487 (45%), Gaps = 16/487 (3%)

Query: 93   TQLFPS------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
             QLF S      S N +T    + +++D   K+   D AL  F++M     RP   TFN+
Sbjct: 599  VQLFESMNGHGCSPNTIT----FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654

Query: 147  LLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL-EEMG 205
            ++   IK          F + +  +  D  +   L+ G  ++G +  AF +      ++G
Sbjct: 655  IIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVG 714

Query: 206  FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQK 262
             + +   +  ++ G       E+A +   ++    +         +I   C   K  + +
Sbjct: 715  SNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVAR 774

Query: 263  DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
            + F  + K    GV P+L  YN LI  +     V   + LF+EM+    A +  TYN+LI
Sbjct: 775  NVFVKFTKEL--GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832

Query: 323  CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
                K  ++ E   L D+M   G  PN ITYN +I     +   DKA  L+  L S   S
Sbjct: 833  DAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFS 892

Query: 383  PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
            P+  T+  LI    K+G    A ++   M   G  P+   Y IL++ + +   ++ A E 
Sbjct: 893  PTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEF 952

Query: 443  YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
            +  M K G  PD+ +Y +L+  LC+ G + +A   F  + +  L+P+ V YN+MI G  +
Sbjct: 953  FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR 1012

Query: 503  EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
               +  AL L  EM  +G+VP++ +Y+S I  L   G   EA  +  ++  +GLKP+V  
Sbjct: 1013 SQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFT 1072

Query: 563  YNILYRA 569
            YN L R 
Sbjct: 1073 YNALIRG 1079



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 167/347 (48%), Gaps = 3/347 (0%)

Query: 116  HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELD 174
            H K+ ++      F + L  GV+P    +N L+   ++  + +  W  F E +      D
Sbjct: 767  HKKTSVARNVFVKFTKEL--GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPD 824

Query: 175  VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
             +++  LI    ++G +N+ F++ +++   G  PN + Y  +I    K+  +++A  L+ 
Sbjct: 825  TFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYY 884

Query: 235  KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
             +       T  T+  LI GL K+G   D  E ++ M   G  P+   YN L++ Y   G
Sbjct: 885  NLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLG 944

Query: 295  KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
             V    + F  M    +  ++ +Y  L+  LC   RV +A    +++K AG+ P+++ YN
Sbjct: 945  HVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004

Query: 355  KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
             +I+G   +  T++A  LF+++++ G  P + TYN LI      G  + A  +  E++  
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064

Query: 415  GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVL 461
            G+ P+  TY  LI  +  S + E A+ +Y  M   G  P+  T+  L
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 227/485 (46%), Gaps = 45/485 (9%)

Query: 127 FYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGC 185
           F F ++L     P    F  ++++  K          F   R + +E + + F  L+   
Sbjct: 286 FLFKKLLHE---PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY 342

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK------NGDIERAKMLFRKIGEL 239
             A D+  A   + +++  G    +V Y+ LI G  K      +G++ERA+ L R++ E 
Sbjct: 343 AVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEED 402

Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
           G+ A    Y  ++ G      +      +E+++  G  PS+ +Y CL++ Y   GKV++ 
Sbjct: 403 GIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 462

Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
             +  EM    +  N  TY+ LI G         A  + ++M  +G+ P+   YN LI+ 
Sbjct: 463 LSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEA 522

Query: 360 FCDAGETDKA------------------FR-----------------LFNQLKSNGQSPS 384
           FC  G  D+A                  FR                   + ++ +G  P+
Sbjct: 523 FCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPT 582

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           V+TYN LI    +    + A  ++ +M   GITP+E TYTI++  +  S D+ KAFE ++
Sbjct: 583 VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFT 642

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            +++SG   DVY Y  L+   C  G M+ A  +   M   K+  N  +YN++I G+ + G
Sbjct: 643 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 702

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
           + + A  L+ +M E G+ PNI +Y+S I   C+ G    AE ++ +M+ +GLKP+V  Y 
Sbjct: 703 DVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYT 762

Query: 565 ILYRA 569
            L + 
Sbjct: 763 TLIKG 767



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 2/428 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
           +  I D+H    + ++A     +M + G+    + ++S++       + +K  + F    
Sbjct: 377 FAKINDSHQSGNM-ERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 435

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
            C  +  + S+G L+    + G + KA  +  ++E  G   N   Y+ LI+G     D  
Sbjct: 436 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 495

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A  +F ++   GL   +  Y +LI    K G         EKMQ   + PS   +  +I
Sbjct: 496 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 555

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G +       D MR       V+TYN LI GL ++ +VQ A  +LD+M +AGI+
Sbjct: 556 EGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 615

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
           PN  TY  ++ G+  +G+  KAF  F ++K +G    V  Y  L+RA  K+G  + A  +
Sbjct: 616 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 675

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
            REM  + I  +   Y ILID + R  D+ +A ++   M++ G  P+++TY   I+  C 
Sbjct: 676 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 735

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
            G+M+ A K+   M +  L+PN   Y  +I G+ +     RAL+   EM   GL P+ AS
Sbjct: 736 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 795

Query: 528 YSSTIGVL 535
           Y   +  L
Sbjct: 796 YHCLVTSL 803



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
           Y  +++ ++K     +AL    +M   G++  + T++ L+   I    F   +  F E  
Sbjct: 446 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 505

Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
           R  ++ D   + +LI+  C+ G++++A  +L ++++    P+   +  +I+G    GD++
Sbjct: 506 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 565

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
            A      +   G V T  TY  LI GL +    +      +KM + G++P+ +TY  ++
Sbjct: 566 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 625

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
             Y   G + + F+ F +++   +  +V  Y TL+   CK  R+Q A  +  +M    I 
Sbjct: 626 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 685

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
            N   YN LIDG+   G+  +A  L  Q+K +G  P++ TY   I A  KAG+ + A  +
Sbjct: 686 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 745

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
           + EM + G+ P+  TYT LI  + R    ++A + +  M+ +G  PD  +Y  L+  L  
Sbjct: 746 IEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 805

Query: 468 KGNMKEAS 475
           +  + E S
Sbjct: 806 RATVMEGS 813



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 165/334 (49%), Gaps = 2/334 (0%)

Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
           ++ Y  +I+  +       A   F +ML SG++P    +N L+    K  + D+      
Sbjct: 478 NKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILE 537

Query: 166 E-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
           +  + +++    +F  +I+G   AGD+  A + L+ +   G  P V+ Y +LI G  +  
Sbjct: 538 KMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKH 597

Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
            ++RA  +  K+   G+   +HTYT+++ G   +G     FE++ K++ +G+   +Y Y 
Sbjct: 598 KVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 657

Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
            L+   C  G++     +  EM  +++  N   YN LI G  +   V EAE L+ QMK  
Sbjct: 658 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED 717

Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
           G+ PN+ TY   I+  C AG+  +A ++  ++   G  P+V TY  LI+ +++      A
Sbjct: 718 GVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRA 777

Query: 405 SDLVREMEERGITPSEVTYTILIDSFV-RSDDME 437
                EM+  G+ P E +Y  L+ S + R+  ME
Sbjct: 778 LKCFEEMKLAGLKPDEASYHCLVTSLLSRATVME 811


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/409 (32%), Positives = 202/409 (49%), Gaps = 18/409 (4%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
           D  ++  +I   CEA  + KAF +  +++ +G +P+V  YT LID  CK G IE+A+  F
Sbjct: 287 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWF 346

Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
            ++  +G  A   TYT L+    K        + + +M   G  P+  TY+ L+   C  
Sbjct: 347 DEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA 406

Query: 294 GKVSE---------------GFKLFDEMRHRE-VACNVVTYNTLICGLCKEMRVQEAERL 337
           G++ +               G   + E +H + +A NVVTY  LI GLCK  +V +A+ L
Sbjct: 407 GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 466

Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
           LD M   G  PN I Y+ LIDGFC  G+ D A  +F ++   G  P+V TY  LI A  K
Sbjct: 467 LDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFK 526

Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
                +A  ++ +M E   TP+ VTYT +ID   R  + +KA ++ S+M++ G SP+V T
Sbjct: 527 DRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVT 586

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
           Y  LI GL   G +  + +LF  M      PN V Y ++I   C  G    A  LL EM 
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +      +  Y S +    +  K+  +  LL ++   G  P   +Y +L
Sbjct: 647 QTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLL 693



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 226/521 (43%), Gaps = 66/521 (12%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL----- 162
           L   +I   +++ L D+A+ + H+M  +   P   T+ +LL   +K      GW      
Sbjct: 109 LCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQL--GWCKRIIN 166

Query: 163 FFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
              +  C     +  F  L+   C A D   A+++L ++ + G  P  V Y   I   C 
Sbjct: 167 MMMKEGCNPNPSL--FNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICG 224

Query: 223 N-----------------------------------------GDIERAKMLFRKIGELGL 241
                                                     G  + A  + + +   G 
Sbjct: 225 GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGF 284

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
           V    TY+ +I  L +    +  F  +++M+  GV+P +YTY  LI  +C  G + +   
Sbjct: 285 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARS 344

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
            FDEMR    + NVVTY  L+    K  ++ +A  + ++M  AG  PN ITY+ L+DG C
Sbjct: 345 WFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLC 404

Query: 362 DAGETDKAFRLFNQL----------------KSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
            AGE  KA  ++ +L                 ++  +P+VVTY  LI    KA     A 
Sbjct: 405 KAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 464

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
           +L+  M   G  P+ + Y  LID F +   ++ A E++  M K G+ P V+TY  LI  +
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
                +  A K+ + M E+   PN V Y  MI G C+ G   +AL+LL  M EKG  PN+
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y++ I  L + GK   +  L  QM   G  P+   Y +L
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 226/443 (51%), Gaps = 26/443 (5%)

Query: 99  SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
           S+N VT    Y +++ A+LK++   QA   F++M+D+G  P + T+++L+  + K+    
Sbjct: 355 SANVVT----YTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQ 410

Query: 159 KG-----------------WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
           K                  + F  ++   +  +V ++G LI G C+A  +  A E+L+ +
Sbjct: 411 KACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAM 470

Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQ 261
              G  PN +IY +LIDG CK G I+ A+ +F ++ + G + T HTYT LI  +FK+   
Sbjct: 471 LSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRL 530

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
               +   +M  +  +P++ TY  +I   C  G+  +  KL   M  +  + NVVTY  L
Sbjct: 531 DLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTAL 590

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
           I GL K  +V  + +L  QM   G +PN +TY  LI+  C AG  D+A  L +++K    
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 650

Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
              +  Y  +++ FSK   + +   L+ E+E  G  P    Y +LID+F ++  +E+A E
Sbjct: 651 PKYLQGYCSVVQGFSKKFIASLG--LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALE 708

Query: 442 MYSLMQKSGFSPDVYT---YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIF 498
           ++  M +   S ++ +   Y  LI  LC+   +++A +L++ +    + P   V+  +I 
Sbjct: 709 LHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIK 768

Query: 499 GYCKEGNSYRALRLLGEMNEKGL 521
           G  K      AL+L   + ++G+
Sbjct: 769 GLIKVNKWNEALQLCYSICDEGV 791



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 223/510 (43%), Gaps = 88/510 (17%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR-CKVELDVYSFGIL 181
           D A      M+  G  P ++T++ ++ F+ ++   +K +L F E +   V  DVY++ IL
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 182 IKGCCEAG-----------------------------------DLNKAFEVLNQLEEMGF 206
           I   C+AG                                    L +A ++ N++ + G 
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRK-------IGELGLVATQHT---------YTV 250
            PN + Y++L+DG CK G+I++A  ++ K       +G       +HT         Y  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI GL K     D  E  + M  NG  P+   Y+ LI  +C  GK+    ++F  M    
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
               V TY +LI  + K+ R+  A ++L QM  +  +PNV+TY  +IDG C  GE  KA 
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           +L + ++  G SP+VVTY  LI    K+G   ++  L  +M  +G  P+ VTY +LI+  
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629

Query: 431 VRSDDMEKAFEMYSLMQKS--------------GFS-------------------PDVYT 457
             +  +++A  + S M+++              GFS                   P    
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPV 689

Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV---VYNMMIFGYCKEGNSYRALRLLG 514
           YG+LI      G ++EA +L   M E     N     +Y  +I   C      +A  L  
Sbjct: 690 YGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYS 749

Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
           E+  KG+VP ++ +   I  L +  KW EA
Sbjct: 750 EITRKGVVPELSVFVCLIKGLIKVNKWNEA 779



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 229/487 (47%), Gaps = 22/487 (4%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V  +  Y  +I    ++   ++A   F +M   GV P   T+  L+    K+   ++   
Sbjct: 285 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARS 344

Query: 163 FFSENR-CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
           +F E R      +V ++  L+    +A  L +A ++ N++ + G  PN + Y++L+DG C
Sbjct: 345 WFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLC 404

Query: 222 KNGDIERAKMLFRK-------IGELGLVATQH---------TYTVLICGLFKNGLQKDGF 265
           K G+I++A  ++ K       +G       +H         TY  LI GL K     D  
Sbjct: 405 KAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 464

Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
           E  + M  NG  P+   Y+ LI  +C  GK+    ++F  M        V TY +LI  +
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524

Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
            K+ R+  A ++L QM  +  +PNV+TY  +IDG C  GE  KA +L + ++  G SP+V
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
           VTY  LI    K+G   ++  L  +M  +G  P+ VTY +LI+    +  +++A  + S 
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644

Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
           M+++ +   +  Y  ++ G   K     +  L   +      P   VY ++I  + K G 
Sbjct: 645 MKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGR 702

Query: 506 SYRALRLLGEMNEKGLVPNIAS---YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
              AL L  EM E     NI S   Y+S I  LC   +  +A  L +++ + G+ P +S+
Sbjct: 703 LEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSV 762

Query: 563 YNILYRA 569
           +  L + 
Sbjct: 763 FVCLIKG 769



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 205/497 (41%), Gaps = 61/497 (12%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAG 189
           ++ D G RP   T+N+L+  +  +   D G+    E +     +D ++ G   +  C+ G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
             + A   L  +E   F  + V+ T +I G  +    + A     ++     +    TY 
Sbjct: 90  RWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L+ G  K             M   G +P+   +N L+H YCN       +KL   M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 310 EVACNVVTYNTL---ICG--------------------------------------LCKE 328
                 V YN     ICG                                      LC  
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
            +   A +++  M   G  P+  TY+K+I   C+A + +KAF LF ++KS G +P V TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
            +LI +F KAG  + A     EM   G + + VTYT L+ +++++  + +A ++++ M  
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET----------------KLEPNDVV 492
           +G  P+  TY  L+ GLC  G +++A +++  +  T                 + PN V 
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           Y  +I G CK      A  LL  M   G  PN   Y + I   C+ GK   A+ +  +M 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 553 KLGLKPSVSLYNILYRA 569
           K G  P+V  Y  L  A
Sbjct: 507 KCGYLPTVHTYTSLIDA 523



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 3/163 (1%)

Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
           E+++ G  PS  TY  L+     +  M+  F +   M +SGF  D +T G     LC +G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
              +A  +         + + V+   MI G  +      A+  L  M     +PN+ +Y 
Sbjct: 90  RWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
           + +    +  +    + ++N M+K G  P+ SL+N L  +  N
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCN 189


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 226/460 (49%), Gaps = 2/460 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y SI+D + K  L ++A+    +M+   + P    + +L+    K+         F E 
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
           + + +E + +     +     +G + +A E+   +   G  P+ V YTS++DG  K G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  + +++ E         Y VLI GLFK G + +   F+  M+  G++P   T+N +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNTM 442

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           I+ YC EG +    KL +EM+   +  N +T N L+  LC    +++   LL+ M + G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
            P   T+  ++D    +   D      +QL   G    + TYN LI  F + G  + A+ 
Sbjct: 503 HPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATL 562

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           + ++M  +GI    +TY  LI  +  S  ++KAF ++S M   G SP+V TY +L+ GL 
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS 622

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
               +KEA+ L N M E  L PN   Y++++ G+ K GN    ++L  EM  KG VP   
Sbjct: 623 AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR 682

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           +Y+  I    +  K  +A+ L+ +M   G+ P+ S Y+IL
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 211/466 (45%), Gaps = 71/466 (15%)

Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID--------------- 218
           D+ ++  L+ G C+ GDL  A +++ ++  +   PNV+ YT+LID               
Sbjct: 51  DIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMY 110

Query: 219 --------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
                               G CK+G +E AK +FR++ E+G+V  + +Y  LI  LFK 
Sbjct: 111 DEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE 170

Query: 259 GLQKDGFEFYEKMQLNGVS-----------------------------------PSLYTY 283
           G   + F    +M + G+                                    P+  TY
Sbjct: 171 GNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230

Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
           + LI  +C  G V++G  L  EM  + +  NV+ Y++++ G  K+  + EA  ++ +M  
Sbjct: 231 SALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290

Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
             I PNV  Y  LIDG+  A +   A  LF ++KS G   +    +  +    ++G  + 
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350

Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
           A +L ++M  RG+ P  V YT ++D F ++     AF +   M +     DV  Y VLI+
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410

Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
           GL   G   E+      M +  L P+   +N MI  YCKEGN   AL+LL EM   GL P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
           N  + +  +  LC  G+  +   LLN ML +G  P+ + +  +  A
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 213/468 (45%), Gaps = 69/468 (14%)

Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
           ++   V  F +LI G C  G++++A E+L  ++  G +P++V Y +L++G CK GD+  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
           K L  +I  + L     TYT LI    K+   +D    Y++M +  + P + TY C+++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS-- 347
            C  GKV E   +F EM    V  N  +Y TLI  L KE  V EA  L  +M + GI   
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 348 ---------------------------------PNVITYNKLIDGFCDAGETDKAFRLFN 374
                                            PN +TY+ LIDG C  G+ +K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
           +++     P+V+ Y+ ++  ++K G    A D++R+M +R I P+   Y  LID + ++D
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
               A +++  M+  G   + +     ++ L   G M+EA +LF  M    L P+ V Y 
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 495 MMIFGYCKEGNSYRALRLLGEMNEK----------------------------------G 520
            M+ G+ K G    A  +  EM EK                                  G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431

Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
           L P+ A++++ I   C++G    A  LLN+M   GLKP+    NIL +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 228/467 (48%), Gaps = 2/467 (0%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y +++D   K+ +++ A   F  +L+  + P   T+++L+    K    +KG L   E 
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             K +  +V  +  ++ G  + G LN+A +V+ ++ +    PNV +Y +LIDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
             A  LF+++   GL          +  L ++G  ++  E ++ M   G+ P    Y  +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
           +  +   GK S+ F +  EM  +    +VV YN LI GL K +   E+E     M+  G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK-LGKYESESFHTGMRQLGL 432

Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
           +P+  T+N +I+ +C  G    A +L N++KS G  P+ +T N+L++    AG  +   D
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
           L+ +M   G  P+  T+  ++D+  +S   +     +  +   G   D+ TY  LI   C
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
             G ++ A+ +F  M    +  + + YN +I GYC   +  +A  +  +M  +G+ PN+ 
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
           +Y+  +G L       EA  L+NQM + GL P+ + Y+IL      I
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 228/494 (46%), Gaps = 49/494 (9%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
           +Y ++ID + K+     AL  F +M   G+   +   +S +  + +S   ++    F + 
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 168 RCKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
             +  L D  ++  ++ G  +AG  + AF +  ++ E     +VV Y  LI+G  K G  
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418

Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
           E ++     + +LGL     T+  +I    K G   +  +   +M+  G+ P+  T N L
Sbjct: 419 E-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477

Query: 287 IHEYCNEGKVSEGFKLFDEM----------RHREV------------------------- 311
           +   C  G++ +   L ++M           H+ V                         
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGV 537

Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
             ++ TYNTLI   C+   ++ A  +   M   GI  ++ITYN LI G+C +    KAF 
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           + +Q+ + G SP+V TYN+L+   S A   K A+ LV +M+ERG+ P+  TY IL+    
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           +  +M++  ++Y  M   GF P   TY VLI        M +A +L   M    + PN  
Sbjct: 658 KIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSS 717

Query: 492 VYNMMIFGYCK-----EGN-----SYR--ALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
            Y+++I G+ K     E N     SY+  A RL  EMNEKG +P   + +     L + G
Sbjct: 718 TYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPG 777

Query: 540 KWPEAEVLLNQMLK 553
           K  +A+ +LN++ K
Sbjct: 778 KKADAQRILNKLYK 791



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%)

Query: 198 LNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
           LN  +      +V  +  LIDG C+NG+I RA  L   +   G      TY  L+ G  K
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            G      +   ++ L  + P++ TY  LI  YC    + +   ++DEM  + +  +VVT
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
           Y  ++ GLCK  +V+EA+ +  +M+  G+ PN  +Y  LID     G   +AF L  ++ 
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
             G    VV Y  L+    KAG +  A D+ + + E  + P+ VTY+ LID   +  D+ 
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           K   +   M++    P+V  Y  ++ G   KG + EA  +   M +  + PN  VY  +I
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GY K      AL L  EM  +GL  N     S +  L + G+  EA+ L   M+  GL 
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 558 PS 559
           P 
Sbjct: 365 PD 366



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 186/426 (43%), Gaps = 12/426 (2%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S++D   K+     A     +M +         +N L+  + K   ++         +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
             +  D  +F  +I   C+ G+L  A ++LN+++  G  PN +    L+   C  G+IE+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
              L   +  +G   T  T+  ++    K+         ++++   GV   L TYN LI 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
            +C  G +     +F +M  + +  +++TYN LI G C    +++A  +  QM   G+SP
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           NV TYN L+ G   A    +A  L NQ+K  G  P+  TY++L+    K GN K    L 
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL--- 465
            EM  +G  P   TY +LI  F +   M +A E+   MQ  G  P+  TY +LI G    
Sbjct: 670 CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 466 ---------CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
                      +    EA +LF  M E    P +     + F   K G    A R+L ++
Sbjct: 730 SKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789

Query: 517 NEKGLV 522
            +K  V
Sbjct: 790 YKKKTV 795



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
           +H E+  +V  +N LI G C+   +  A  LL+ MK  G +P+++TYN L++GFC  G+ 
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAF------------------------------- 395
             A +L  ++      P+V+TY  LI A+                               
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 396 ----SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGF 451
                K+G  + A  + REMEE G+ P+  +Y  LIDS  +  ++ +AF +   M   G 
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 452 SPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALR 511
             DV  Y  L+ GL   G    A  +F  + E  L PN V Y+ +I G+CK G+  +   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 512 LLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           LL EM EK + PN+  YSS +    + G   EA  ++ +M++  + P+V +Y  L
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 120/231 (51%)

Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
           R L+  +   I  +V  +N LIDG+C  GE  +A  L   +K+ G +P +VTYN L+  F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
            K G+   A  L+ E+    + P+ +TYT LID++ +S  +E A  MY  M      PDV
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
            TY  +++GLC  G ++EA  +F  M E  + PN   Y  +I    KEGN   A  L G 
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
           M  +G+  ++  Y++ +  L + G    AE +   +L+  L P+   Y+ L
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
           +N++I GYC+ G   RA+ LL  M  +G  P+I +Y++ +   C+ G    A+ L+ ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 553 KLGLKPSVSLYNILYRA 569
            + L+P+V  Y  L  A
Sbjct: 80  LVNLEPNVITYTTLIDA 96


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 255/552 (46%), Gaps = 16/552 (2%)

Query: 25  PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII--SGRITSSS 82
           P+ A S FN     G +H   + + I+R+L        H   +++ L II  S     + 
Sbjct: 80  PISALSFFNQLKDSGFKHDISTYAAIIRILCY---WGLHKQLRSIFLDIIYVSCNDNDTP 136

Query: 83  FTPRSLLCHLTQLF---PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
           F     L  L+  F    S    +  S++Y++++ A++   + D A+    QM      P
Sbjct: 137 FEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVP 196

Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
                N L+  +IK+   D     + +  R  +  + Y++ I+IK  C  G L +A  V+
Sbjct: 197 HIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVI 256

Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKN 258
            ++EE G +P    YT+ I+G C N   +    + +      +    + YTV + G F N
Sbjct: 257 KEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRG-FCN 315

Query: 259 GLQKDGFE-FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
            L+ D  E     M+  G+ P ++ Y  LI  +C  G + + +   +EM  + V  N V 
Sbjct: 316 ELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVI 375

Query: 318 YNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLK 377
             +++  LC+     E     +Q K  G+  + ++YN ++D  C  G+ ++A  L +++K
Sbjct: 376 VGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMK 435

Query: 378 SNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME 437
               +  V+ Y  LI  +   GN   A  +  EM E GI    VTY +L+  F R+    
Sbjct: 436 MKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLAT 495

Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
           +A  +   MQ     P+  TY V++  LCM G +KEA  +FNS+ +  L+     Y  MI
Sbjct: 496 EALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDN----YFAMI 551

Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
            GYCK  ++  A +L   ++ KG V     Y+  +  LC++G      +LL  ML L ++
Sbjct: 552 NGYCKANHTAGAAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDNDGILMLLETMLNLNVE 610

Query: 558 PSVSLYNILYRA 569
           PS  +Y  L+ +
Sbjct: 611 PSKFIYGKLFTS 622



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 231/491 (47%), Gaps = 59/491 (12%)

Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
           D+A      M   G+ P  + + +L+    K+ +  K + F +E   K V+++    G +
Sbjct: 320 DKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSI 379

Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
           +   CE G  ++  +  NQ + +G   + V Y +++D  CK G +E A  L  ++    +
Sbjct: 380 LHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQI 439

Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
                 YT LI G    G   D F+ +E+M+ NG+   + TY+ L+  +C  G  +E   
Sbjct: 440 NMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALN 499

Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
           L D M+ +++  N +TYN ++  LC   +V+EAE + + ++   +      Y  +I+G+C
Sbjct: 500 LLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLD----NYFAMINGYC 555

Query: 362 DAGETDKAFRLFNQLKSNGQ----------------------------------SPSVVT 387
            A  T  A +LF +L   G                                    PS   
Sbjct: 556 KANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFI 615

Query: 388 YNVLIRAFSKAGNS---KMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
           Y  L  +  +AG +   + A  +   + +RG TP  + YTI+I S+ R + +++A +++ 
Sbjct: 616 YGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFH 675

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMK----------------EASKLFNSMWETKLEP 488
            M++ G  PD+ T+ VL+ G   K ++K                +A  ++  M +T+++P
Sbjct: 676 DMKQRGIKPDLVTFTVLLDGH-HKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKP 734

Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
           + + Y ++I GYCK  + + A+ +  EM E+GL P+I +Y++ +   CQ G    A  LL
Sbjct: 735 DVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLL 794

Query: 549 NQMLKLGLKPS 559
           +QM   G+ P 
Sbjct: 795 DQMSLKGISPD 805



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 57/416 (13%)

Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
           LD  S+  ++   C+ G L +A  +L++++    + +V+ YT+LI+G C  G++  A  +
Sbjct: 406 LDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKV 465

Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
           F ++ E G+     TY VL+ G  +NGL  +     + MQ   + P+  TYN ++   C 
Sbjct: 466 FEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCM 525

Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG------- 345
            GKV E   +F+ +  + +      Y  +I G CK      A +L  ++ + G       
Sbjct: 526 GGKVKEAEAVFNSIEDKSLD----NYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCC 581

Query: 346 ---------------------------ISPNVITYNKLIDGFCDAGETD---KAFRLFNQ 375
                                      + P+   Y KL    C AG      KA  +F+ 
Sbjct: 582 YNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDM 641

Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS-- 433
           L   G +P ++ Y ++I ++ +    K A DL  +M++RGI P  VT+T+L+D   ++  
Sbjct: 642 LLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHI 701

Query: 434 -------------DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
                        +D+  A  +++ M+ +   PDV  Y VLI G C   ++ +A  +F+ 
Sbjct: 702 KKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDE 761

Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVL 535
           M E  LEP+ + Y  ++ G C+ G+  RA+ LL +M+ KG+ P+  + S+ + G+L
Sbjct: 762 MIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGIL 817



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 23/350 (6%)

Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
           +E+DV ++ +L+ G C  G   +A  +L+ ++     PN + Y  +++  C  G ++ A+
Sbjct: 474 IEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAE 533

Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
            +F  I +  L      Y  +I G  K        + + ++ + G       YN L+   
Sbjct: 534 AVFNSIEDKSL----DNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYN-LLKNL 588

Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE---MRVQEAERLLDQMKMAGIS 347
           C EG       L + M +  V  +   Y  L   LC+      +++A+ + D +   G +
Sbjct: 589 CEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWT 648

Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA--------- 398
           P++I Y  +I  +C      +A  LF+ +K  G  P +VT+ VL+    KA         
Sbjct: 649 PDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAA 708

Query: 399 ----GNSKMASDLV--REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
               GN  +   L    EM++  I P  + YT+LID + + D +  A  ++  M + G  
Sbjct: 709 NAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLE 768

Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
           PD+ TY  L+ G C +G++  A  L + M    + P+    + ++ G  K
Sbjct: 769 PDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILK 818



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 27/360 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y+ ++    ++ L+ +AL     M    ++P S T+N ++  +       +    F+   
Sbjct: 481 YDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIE 540

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
            K  LD Y    +I G C+A     A ++  +L   G       Y +L+   C+ GD + 
Sbjct: 541 DK-SLDNYF--AMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCY-NLLKNLCEEGDNDG 596

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGL---QKDGFEFYEKMQLNGVSPSLYTYNC 285
             ML   +  L +  ++  Y  L   L + G     +     ++ +   G +P L  Y  
Sbjct: 597 ILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTI 656

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEM---------------R 330
           +I  YC    + E   LF +M+ R +  ++VT+  L+ G  K                  
Sbjct: 657 MITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNED 716

Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
           + +A  +  +MK   I P+VI Y  LIDG+C       A  +F+++   G  P ++TY  
Sbjct: 717 IFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTA 776

Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDME-----KAFEMYSL 445
           L+    + G+   A +L+ +M  +GI+P   T + L+   +++         K F+ YSL
Sbjct: 777 LLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQCSAPQCLKYFDGYSL 836


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 228/461 (49%), Gaps = 1/461 (0%)

Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
           + ++ +   ++ + + ++ L  F  M+  G+     +    L+   K    D    FF  
Sbjct: 136 KFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRR 195

Query: 167 N-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
                V++ VYS  I+++G C  G++ K+ +++ +    G  P    Y ++I+   K+ D
Sbjct: 196 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
               + + + + + G+V  + TYT+LI    KNG   D  + +++M+  G+   ++ Y  
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C +G +   F LFDE+  + +  +  TY  LI G+CK   +  AE L+++M+  G
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG 375

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
           ++   + +N LI+G+C  G  D+A  +++ ++  G    V T N +   F++      A 
Sbjct: 376 VNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAK 435

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
             +  M E G+  S V+YT LID + +  ++E+A  ++  M      P+  TY V+I+  
Sbjct: 436 QWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAY 495

Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
           C +G +KEA KL+ +M    ++P+   Y  +I G C   N   A+RL  EM  KGL  N 
Sbjct: 496 CKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 555

Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
            +Y+  I  L + GK  EA  L +++ + G      +Y  L
Sbjct: 556 VTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTAL 596


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 201/386 (52%), Gaps = 1/386 (0%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C+ G ++ A   L  +E  G  PNVV Y +++   C+  +++ A+ +F ++ E GL    
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNN 519

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
            TY++LI G FKN  +++ +E   +M  +    +   YN +I+  C  G+ S+  ++   
Sbjct: 520 FTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579

Query: 306 M-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAG 364
           + + +  +    +YN++I G  KE     A     +M   GISPNV+T+  LI+GFC + 
Sbjct: 580 LIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSN 639

Query: 365 ETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYT 424
             D A  + +++KS      V  Y  LI  F K  + K A  L  E+ E G+ P+   Y 
Sbjct: 640 RMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYN 699

Query: 425 ILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
            LI  F     M+ A ++Y  M   G S D++TY  +I GL   GN+  AS L++ +   
Sbjct: 700 NLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLAL 759

Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
            + P++++Y +++ G  K+G   RA ++L EM +K   PN+  YS+ I    ++G   EA
Sbjct: 760 GIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEA 819

Query: 545 EVLLNQMLKLGLKPSVSLYNILYRAK 570
             + ++ML+ GL    +++N+L   +
Sbjct: 820 FRVHDEMLEKGLVHDDTIFNLLVSGR 845



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 233/487 (47%), Gaps = 19/487 (3%)

Query: 27  KAFSLFNWASRQGLQHTPQSISIILRL------------LLSKMSSHSHAAAQTLILKII 74
           KA   FN    +GL       S+++              +  +M S   A +  L+ K+I
Sbjct: 363 KALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMI 422

Query: 75  SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134
            G + + S  P + L      F +    +    +   I     K    D A  +   M +
Sbjct: 423 QGCLKAES--PEAALEIFNDSFETW---IAHGFMCNKIFLLLCKQGKVDAATSFLRMMEN 477

Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNK 193
            G+ P    +N++++   +  + D     FSE   K ++ + +++ ILI G  +  D   
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQN 537

Query: 194 AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLI 252
           A+EV+NQ+    F  N VIY ++I+G CK G   +AK ML   I E        +Y  +I
Sbjct: 538 AWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSII 597

Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
            G FK G      E Y +M  NG+SP++ T+  LI+ +C   ++    ++  EM+ +++ 
Sbjct: 598 DGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLK 657

Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
            +V  Y  LI G CK+  ++ A  L  ++   G+ PNV  YN LI GF + G+ D A  L
Sbjct: 658 LDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDL 717

Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
           + ++ ++G S  + TY  +I    K GN  +ASDL  E+   GI P E+ Y +L++   +
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSK 777

Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
                +A +M   M+K   +P+V  Y  +I G   +GN+ EA ++ + M E  L  +D +
Sbjct: 778 KGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTI 837

Query: 493 YNMMIFG 499
           +N+++ G
Sbjct: 838 FNLLVSG 844



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/622 (23%), Positives = 277/622 (44%), Gaps = 79/622 (12%)

Query: 25  PLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
           P+ A    NW    + L        +++ +L S  S H+H  A  L++  +S   ++ + 
Sbjct: 93  PVSALQYCNWVKPLRSLCEGGDVFWVLIHILFS--SPHTHDRASNLLVMFVS---SNPTL 147

Query: 84  TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
            P +++ +L          ++ SR +  +++A++++R  D A+  F+ M+D  V P    
Sbjct: 148 IPSAMVNNLVDSSKRFDFELS-SRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPY 206

Query: 144 FNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
            N++L  +++S   D+    +++     V  D  +  +L++         +A ++  ++ 
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVM 266

Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV-ATQHTYTVLICGLFKNGLQ 261
             G  P+ ++++  +   CK  D+  A  L R++ E G V A+Q TYT +I    K G  
Sbjct: 267 SRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNM 326

Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
           ++  +  ++M   G+  S+     LI  +CN  ++ +    F+ M    +A + V ++ +
Sbjct: 327 EEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVM 386

Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG---------------------- 359
           I   CK M +++A  +  +MK  GI+P+ +  +K+I G                      
Sbjct: 387 IEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWI 446

Query: 360 ------------FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
                        C  G+ D A      +++ G  P+VV YN ++ A  +  N  +A  +
Sbjct: 447 AHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506

Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
             EM E+G+ P+  TY+ILID F ++ D + A+E+ + M  S F  +   Y  +I+GLC 
Sbjct: 507 FSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCK 566

Query: 468 KGNMKEASKL------------------------------------FNSMWETKLEPNDV 491
            G   +A ++                                    +  M E  + PN V
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVV 626

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +  +I G+CK      AL ++ EM  K L  ++ +Y + I   C+      A  L +++
Sbjct: 627 TFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSEL 686

Query: 552 LKLGLKPSVSLYNILYRAKNNI 573
           L+LGL P+VS+YN L     N+
Sbjct: 687 LELGLMPNVSVYNNLISGFRNL 708



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 37/361 (10%)

Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF---- 163
            Y +++ AH + +  D A   F +ML+ G++P + T++ L+    K+      W      
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQM 545

Query: 164 ----FSENR----------CKV-------------------ELDVYSFGILIKGCCEAGD 190
               F  N           CKV                    +   S+  +I G  + GD
Sbjct: 546 IASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGD 605

Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
            + A E   ++ E G SPNVV +TSLI+G CK+  ++ A  +  ++    L      Y  
Sbjct: 606 TDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGA 665

Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
           LI G  K    K  +  + ++   G+ P++  YN LI  + N GK+     L+ +M +  
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDG 725

Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
           ++C++ TY T+I GL K+  +  A  L  ++   GI P+ I Y  L++G    G+  +A 
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRAS 785

Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
           ++  ++K    +P+V+ Y+ +I    + GN   A  +  EM E+G+   +  + +L+   
Sbjct: 786 KMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGR 845

Query: 431 V 431
           V
Sbjct: 846 V 846


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 188/362 (51%), Gaps = 1/362 (0%)

Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
           E DV ++ ILI   C  G L+ A  V++QL +    P V+ YT LI+     G I+ A  
Sbjct: 178 EPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK 237

Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
           L  ++   GL   ++TY V++ G+ K G+    FEF  ++  NG    + TYN L+ +  
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297

Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
           NEGK   G KL  +M  +    N +TY+TLI  LC++ ++ EA+ +L  MK   ++P+  
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357

Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
           +Y+ LI   C  G+ D A    + + S G  P +++YN ++ +  K GN+  A ++  ++
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417

Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
            E G  P+  +Y  L  +   S D  +A  M   M  +G  PD  TY  LI  LC  G +
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477

Query: 472 KEASKLFNSMWET-KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
            +A +L   M+E+ K +P  + YN ++ G CK      A+ +L  M  +G +PN  +Y+ 
Sbjct: 478 DQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTL 537

Query: 531 TI 532
            I
Sbjct: 538 LI 539



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 1/381 (0%)

Query: 186 CEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQ 245
           C++   +++   L  +   G+ P+V++ T LI G      IE+A  +   + + G     
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 246 HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDE 305
             Y  +I G  K        +  ++M+  G  P + TYN LI  +C  G++    ++ D+
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
           +        V+TY  LI     +  + EA +LLD+M   G+ P+  TYN +++G C  G 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
            D+AF   +++  NG    V TYN+L+R     G  +    L+ +M  +G  P+ +TY+ 
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
           LI +  R   +++A  +  +M++   +PD Y+Y  LI  LC +G +  A +  + M    
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
             P+ + YN ++   CK GN+  AL +  ++ E G  PN  SY++  G L   G    A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 546 VLLNQMLKLGLKPSVSLYNIL 566
            ++ +ML  G+ P    YN L
Sbjct: 447 GMILEMLSNGIDPDEITYNSL 467



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 6/408 (1%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-- 166
           Y ++I    K+   D A     +M   G  P   T+N L+         D       +  
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLL 208

Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
            + CK    V ++ ILI+     G +++A ++L+++   G  P+   Y  +++G CK G 
Sbjct: 209 KDNCKPT--VITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
           ++RA     +I + G VA   TY +L+  L   G  + G +    M + G  P+  TY+ 
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
           LI   C +GK+ E   +   M+ + +A +  +Y+ LI  LC+E +V  A   LD M   G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
             P++++YN ++   C  G  D+A  +F +L   G  P+  +YN L  A   +G+   A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHG 464
            ++ EM   GI P E+TY  LI    R   +++A E+   + +     P V +Y  ++ G
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
           LC    + +A ++  +M      PN+  Y ++I G    G  Y A+ L
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 165/358 (46%), Gaps = 16/358 (4%)

Query: 92  LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
           + QL   +  P   +  Y  +I+A +     D+A+    +ML  G+RP   T+N ++  +
Sbjct: 204 MDQLLKDNCKPTVIT--YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGM 261

Query: 152 IKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
            K    D+ + F S   +N C   +  Y+  IL++     G      ++++ +   G  P
Sbjct: 262 CKEGMLDRAFEFLSRISKNGCVAGVSTYN--ILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
           N + Y++LI   C++G I+ AK + + + E  L    ++Y  LI  L + G      EF 
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC--NVVTYNTLICGLC 326
           + M   G  P + +YN ++   C  G   E   +F+++   EV C  N  +YNTL   L 
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG--EVGCPPNAGSYNTLFGALW 437

Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF-NQLKSNGQSPSV 385
                  A  ++ +M   GI P+ ITYN LI   C  G  D+A  L  +  +S    P+V
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497

Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF----VRSDDMEKA 439
           ++YN ++    K      A +++  M   G  P+E TYT+LI        R D ME A
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELA 555



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 2/248 (0%)

Query: 131 QMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAG 189
            ML  G  P   T+++L+  + +    D+        + K +  D YS+  LI   C  G
Sbjct: 311 DMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREG 370

Query: 190 DLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
            ++ A E L+ +   G  P+++ Y S++   CKNG+ + A  +F K+GE+G      +Y 
Sbjct: 371 KVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYN 430

Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
            L   L+ +G +        +M  NG+ P   TYN LI   C +G V +  +L  +M   
Sbjct: 431 TLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES 490

Query: 310 E-VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
           E     V++YNT++ GLCK  R+ +A  +L  M   G  PN  TY  LI G   AG    
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYD 550

Query: 369 AFRLFNQL 376
           A  L N L
Sbjct: 551 AMELANLL 558


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 200/409 (48%), Gaps = 4/409 (0%)

Query: 162 LFFSENRC---KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
           LF   +RC   +    +Y++ ILI     A   +    V  +L   G  P+V  Y +LID
Sbjct: 173 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 232

Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
           G  K G++++A  LF K+ E G++    TY+ LI GL K            +M   GV P
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 292

Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
           +  TYNCLIH Y   G   E  ++F EM    +  +V   N+ +  LCK  R++EA  + 
Sbjct: 293 NNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF 352

Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
           D M + G  P+VI+Y  L+ G+  AG       LFN +   G  P    +N LI A+++ 
Sbjct: 353 DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARL 412

Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
           G    +  +  +M ++G+ P  +T++ +I +F R   ++ A E ++ M  +G  PD   Y
Sbjct: 413 GMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 472

Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV-VYNMMIFGYCKEGNSYRALRLLGEMN 517
             LI G C + ++ +A +L + M    + P  +  +  +I   CKEG       ++  + 
Sbjct: 473 SCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLII 532

Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
             G  PN+ +++S +   C  G   EA  LL+ M  +G++P +  YN L
Sbjct: 533 HTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 581



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 222/470 (47%), Gaps = 39/470 (8%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y  +I+ + ++R  D  L  F ++L +G+ P                             
Sbjct: 192 YNILINCYRRARRPDLGLPVFGRLLRTGLGP----------------------------- 222

Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
                DV+S+  LI G  + G+++KA ++  ++EE G  PNVV Y+SLI+G CK  ++++
Sbjct: 223 -----DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDK 277

Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
           A+ + R++   G+     TY  LI G   +G+ K+    +++M  + + P +   N  + 
Sbjct: 278 AERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMT 337

Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
             C  G++ E   +FD M  +    +V++Y  L+ G      +   + L + M   G+ P
Sbjct: 338 ALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVP 397

Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
           +   +N LI+ +   G  DK+  +F  +   G +P ++T++ +I AF + G    A +  
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 457

Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD-VYTYGVLIHGLCM 467
             M + G+ P    Y+ LI       D+ KA E+ S M   G  P  +  +  +I+ LC 
Sbjct: 458 NHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCK 517

Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
           +G + E   + + +  T   PN + +N ++ GYC  GN   A+ LL  M   G+ P+I +
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 577

Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI----LYRAKNNI 573
           Y++ +   C+ G+  +A  L   ML   +  +   YNI    L++A+  I
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 227/497 (45%), Gaps = 37/497 (7%)

Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
           Y S+I+   K++  D+A     QM+ +GVRP + T+N L+     S  + +    F E  
Sbjct: 262 YSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS 321

Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
             + + DV +    +   C+ G + +A ++ + +   G  P+V+ Y +L+ G    G I 
Sbjct: 322 SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIA 381

Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
               LF  +   G+V  +H +  LI    + G+       +E M   GV+P + T++ +I
Sbjct: 382 GMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 441

Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG----------------------- 324
             +C  G++ +  + F+ M    V  +   Y+ LI G                       
Sbjct: 442 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 501

Query: 325 -------------LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
                        LCKE RV E + ++D +   G  PN+IT+N L+DG+C  G   +A  
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561

Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
           L + ++S G  P + TYN L+  + K G    A  L R+M  + +T + V+Y I++    
Sbjct: 562 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 621

Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
           ++     A EM+  M +SG +  ++TY  ++ GLC      EA+ L   ++   ++ + +
Sbjct: 622 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 681

Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
            +N++I    K G    A  L   ++  GLVP I +Y   I  L ++  + +A+ L + M
Sbjct: 682 TFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 741

Query: 552 LKLGLKPSVSLYNILYR 568
            K    P   + N + R
Sbjct: 742 EKSSCTPDSRILNEIIR 758



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 6/428 (1%)

Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
           V    ++ ++I+A+ +  + D++L  F  M   GV P   TF++++    +    D    
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455

Query: 163 FFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVV-IYTSLIDGC 220
            F+      V  D   +  LI+G C   DL KA E+++ +   G  P  +  +TS+I+  
Sbjct: 456 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 515

Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
           CK G +   K +   I   G      T+  L+ G    G  K+     + M+  GV P +
Sbjct: 516 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 575

Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
           YTYN L+  YC  G++ +   LF +M H+ V    V+YN ++ GL +  R   A+ +  +
Sbjct: 576 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 635

Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
           M  +G++ ++ TY  ++ G C    TD+A  L  +L S      ++T+N++IRA  K G 
Sbjct: 636 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGR 695

Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
            + A +L   +   G+ P+ +TY ++I + ++ +  E A  ++S M+KS  +PD      
Sbjct: 696 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 755

Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE----M 516
           +I  L  KG + +A    + + +  + P     +++I+ +   G     ++LL E    +
Sbjct: 756 IIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFL 815

Query: 517 NEKGLVPN 524
            E+  V N
Sbjct: 816 REQAAVDN 823



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 206/424 (48%), Gaps = 2/424 (0%)

Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCE 187
           F+ M+  GV P  + FN+L+    +    DK  L F +  +  V  D+ +F  +I   C 
Sbjct: 387 FNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR 446

Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVAT-QH 246
            G L+ A E  N + + G  P+  +Y+ LI G C   D+ +AK L   +   G+      
Sbjct: 447 LGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIK 506

Query: 247 TYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEM 306
            +T +I  L K G   +G +  + +   G  P+L T+N L+  YC  G + E   L D M
Sbjct: 507 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 566

Query: 307 RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET 366
               V  ++ TYNTL+ G CK  R+ +A  L   M    ++   ++YN ++ G   A  T
Sbjct: 567 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 626

Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
             A  +F+++  +G + S+ TY  ++    +   +  A+ L+ ++    +    +T+ I+
Sbjct: 627 IVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV 686

Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
           I +  +    ++A E+++ +   G  P + TY V+I  L  + + ++A  LF+SM ++  
Sbjct: 687 IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSC 746

Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
            P+  + N +I     +G   +A   L ++++KG++P   + S  I +   +GK+ E   
Sbjct: 747 TPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIK 806

Query: 547 LLNQ 550
           LL +
Sbjct: 807 LLPE 810



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%)

Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
           F+  ++      +P++YTYN LI+ Y    +   G  +F  +    +  +V +YN LI G
Sbjct: 174 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG 233

Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
             KE  V +A  L  +M+  GI PNV+TY+ LI+G C   E DKA R+  Q+   G  P+
Sbjct: 234 FSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPN 293

Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
            +TYN LI  +S +G  K +  + +EM    + P        + +  +   +++A +++ 
Sbjct: 294 NMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFD 353

Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
            M   G  PDV +YG L+HG    G +     LFN M    + P+  V+N +I  Y + G
Sbjct: 354 SMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 413

Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
              ++L +  +M ++G+ P+I ++S+ I   C+ G+  +A    N M+  G+ P  ++Y+
Sbjct: 414 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 473

Query: 565 ILYRAKNN 572
            L + + N
Sbjct: 474 CLIQGQCN 481


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,560,704,325
Number of Sequences: 23463169
Number of extensions: 349527753
Number of successful extensions: 1111661
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9161
Number of HSP's successfully gapped in prelim test: 4317
Number of HSP's that attempted gapping in prelim test: 824369
Number of HSP's gapped (non-prelim): 89293
length of query: 574
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 426
effective length of database: 8,886,646,355
effective search space: 3785711347230
effective search space used: 3785711347230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)