BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043999
(574 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 636 bits (1641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/561 (57%), Positives = 425/561 (75%), Gaps = 9/561 (1%)
Query: 13 TLNLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLIL 71
TL L++ + K PPLKAFSL N + QHT +SISI+LRLLL + SH AQ+L+L
Sbjct: 8 TLVLLANLIKFPPLKAFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSH----AQSLLL 63
Query: 72 KIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
++ISG+I S FT SLL +LT+ S TK RLYE II+++++S+ + ++ YF++
Sbjct: 64 QVISGKIHSQFFTSSSLLHYLTE----SETSKTKFRLYEVIINSYVQSQSLNLSISYFNE 119
Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191
M+D+G P SN FN LL FV+ S SF++ W FF+EN+ KV LDVYSFGILIKGCCEAG++
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179
Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
K+F++L +L E GFSPNVVIYT+LIDGCCK G+IE+AK LF ++G+LGLVA + TYTVL
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
I GLFKNG++K GFE YEKMQ +GV P+LYTYNC++++ C +G+ + F++FDEMR R V
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
+CN+VTYNTLI GLC+EM++ EA +++DQMK GI+PN+ITYN LIDGFC G+ KA
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431
L LKS G SPS+VTYN+L+ F + G++ A+ +V+EMEERGI PS+VTYTILID+F
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491
RSD+MEKA ++ M++ G PDV+TY VLIHG C+KG M EAS+LF SM E EPN+V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
+YN MI GYCKEG+SYRAL+LL EM EK L PN+ASY I VLC++ K EAE L+ +M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 552 LKLGLKPSVSLYNILYRAKNN 572
+ G+ PS S+ +++ RAKN+
Sbjct: 540 IDSGIDPSTSILSLISRAKND 560
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 275 bits (702), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 254/477 (53%), Gaps = 10/477 (2%)
Query: 104 TKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLF 163
+ S +++ ++ ++ + L D+AL H G P ++N++L I+S K +
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS----KRNIS 187
Query: 164 FSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
F+EN +V +V+++ ILI+G C AG+++ A + +++E G PNVV Y +LI
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
DG CK I+ L R + GL +Y V+I GL + G K+ +M G S
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
TYN LI YC EG + + EM + +V+TY +LI +CK + A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
LDQM++ G+ PN TY L+DGF G ++A+R+ ++ NG SPSVVTYN LI
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
G + A ++ +M+E+G++P V+Y+ ++ F RS D+++A + M + G PD T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
Y LI G C + KEA L+ M L P++ Y +I YC EG+ +AL+L EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
EKG++P++ +YS I L + + EA+ LL ++ PS Y+ L +NIE
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 241/482 (50%), Gaps = 51/482 (10%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
D AL F +M G P T+N+L+ K D G+ K +E ++ S+ ++
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I G C G + + VL ++ G+S + V Y +LI G CK G+ +A ++ ++ GL
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
+ TYT LI + K G EF ++M++ G+ P+ TY L+ + +G ++E ++
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
+ EM + +VVTYN LI G C ++++A +L+ MK G+SP+V++Y+ ++ GFC
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
+ + D+A R+ ++ G P +TY+ LI+ F + +K A DL EM G+ P E
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL---------------- 465
TYT LI+++ D+EKA ++++ M + G PDV TY VLI+GL
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 466 ----------------------------------CMKGNMKEASKLFNSMWETKLEPNDV 491
CMKG M EA ++F SM +P+
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
YN+MI G+C+ G+ +A L EM + G + + + + + L ++GK E ++ +
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Query: 552 LK 553
L+
Sbjct: 702 LR 703
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 90/504 (17%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y ++ID + K R D M G+ P ++N ++ + + + +E N
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
R LD ++ LIKG C+ G+ ++A + ++ G +P+V+ YTSLI CK G++
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
RA ++ GL + TYT L+ G + G + + +M NG SPS+ TYN LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ +C GK+ + + ++M+ + ++ +VV+Y+T++ G C+ V EA R+ +M GI
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 348 PNVITYNKLIDGFCDA-----------------------------------GETDKAFRL 372
P+ ITY+ LI GFC+ G+ +KA +L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS--- 429
N++ G P VVTY+VLI +K ++ A L+ ++ PS+VTY LI++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 430 ------------FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
F M +A +++ M PD Y ++IHG C G++++A L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 478 FNSMWETKL---------------------EPNDVVYNMMIFGYC--------------- 501
+ M ++ E N V+ + + C
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH--VLRSCELSEAEQAKVLVEIN 720
Query: 502 -KEGNSYRALRLLGEMNEKGLVPN 524
+EGN L +L EM + G +PN
Sbjct: 721 HREGNMDVVLDVLAEMAKDGFLPN 744
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 86/400 (21%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y S+I + K+ ++A+ + QM G+ P T+ +L+ + ++ + E N
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
V ++ LI G C G + A VL ++E G SP+VV Y++++ G C++ D++
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A + R++ E G+ TY+ LI G + K+ + YE+M G+ P +TY LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL--------- 338
+ YC EG + + +L +EM + V +VVTY+ LI GL K+ R +EA+RLL
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 339 -------------------------------------DQM--KMAGIS--PNVITYNKLI 357
DQ+ M G + P+ YN +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAG------------------ 399
G C AG+ KA+ L+ ++ +G VT L++A K G
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Query: 400 -----------------NSKMASDLVREMEERGITPSEVT 422
N + D++ EM + G P+ ++
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 244/452 (53%), Gaps = 1/452 (0%)
Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK 170
S+++ + S+ +A+ QM +G +P + TFN+L+ + + K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 171 -VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
+ D+ ++G+++ G C+ GD + AF +LN++E+ P V+IY ++IDG CK ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
LF+++ G+ TY+ LI L G D M ++P ++T++ LI
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
+ EGK+ E KL+DEM R + ++VTY++LI G C R+ EA+++ + M P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
V+TYN LI GFC ++ +F ++ G + VTYN+LI+ +AG+ MA ++ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
EM G+ P+ +TY L+D ++ +EKA ++ +Q+S P +YTY ++I G+C G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
+++ LF ++ ++P+ V YN MI G+C++G+ A L EM E G +PN Y+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
+ I +DG + L+ +M G S
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 238/498 (47%), Gaps = 10/498 (2%)
Query: 79 TSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLS---------DQALFYF 129
T+ F RSL+ S S R + + +LS D A+ F
Sbjct: 10 TAKRFVHRSLVVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALF 69
Query: 130 HQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEA 188
+M+ S P F+ LL + K FD + + + Y++ ILI C
Sbjct: 70 GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129
Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
L A VL ++ ++G+ PN+V +SL++G C + I A L ++ G T+
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
LI GLF + + ++M G P L TY +++ C G F L ++M
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
++ V+ YNT+I GLCK + +A L +M+ GI PNV+TY+ LI C+ G
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
A RL + + +P V T++ LI AF K G A L EM +R I PS VTY+ LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
F D +++A +M+ M PDV TY LI G C ++E ++F M + L
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
N V YN++I G + G+ A + EM G+ PNI +Y++ + LC++GK +A V+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 549 NQMLKLGLKPSVSLYNIL 566
+ + ++P++ YNI+
Sbjct: 490 EYLQRSKMEPTIYTYNIM 507
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 186/362 (51%), Gaps = 7/362 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
+Y +IID K + D AL F +M G+RP T++SL+ + C++ D L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL---CNYGRWSDASRLL 314
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ DV++F LI + G L +A ++ +++ + P++V Y+SLI+G C +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
++ AK +F + TY LI G K ++G E + +M G+ + TY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
N LI G ++F EM V N++TYNTL+ GLCK ++++A + + ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ + P + TYN +I+G C AG+ + + LF L G P VV YN +I F + G+ +
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A L +EM+E G P+ Y LI + +R D E + E+ M+ GF+ D T G++ +
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Query: 464 GL 465
L
Sbjct: 615 ML 616
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 157/301 (52%)
Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
E+MQ G+ + YTY+ LI+ +C ++ + +M N+VT ++L+ G C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
R+ EA L+DQM + G PN +T+N LI G + +A L +++ + G P +VTY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
V++ K G++ +A +L+ +ME+ + P + Y +ID + M+ A ++ M+
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
G P+V TY LI LC G +AS+L + M E K+ P+ ++ +I + KEG
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
A +L EM ++ + P+I +YSS I C + EA+ + M+ P V YN L +
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 569 A 569
Sbjct: 405 G 405
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 15/308 (4%)
Query: 262 KDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
K +++ EK+ NG+S E K+ + LF EM +++ ++ L
Sbjct: 43 KTSYDYREKLSRNGLS---------------ELKLDDAVALFGEMVKSRPFPSIIEFSKL 87
Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
+ + K + L +QM+ GI N TY+ LI+ FC + A + ++ G
Sbjct: 88 LSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY 147
Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
P++VT + L+ + + A LV +M G P+ VT+ LI + +A
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYC 501
+ M G PD+ TYGV+++GLC +G+ A L N M + KLEP ++YN +I G C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 502 KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
K + AL L EM KG+ PN+ +YSS I LC G+W +A LL+ M++ + P V
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 562 LYNILYRA 569
++ L A
Sbjct: 328 TFSALIDA 335
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +++D K+ ++A+ F + S + P T+N ++ + K+ + GW F
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K V+ DV ++ +I G C G +A + +++E G PN Y +LI ++GD E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
+ L +++ G T ++ L L K
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 225/396 (56%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D+ + LI G C G +++A +++++ E GF P+ V Y +++ CK+G+ A LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
RK+ E + A+ Y+++I L K+G D + +M++ G+ + TY+ LI CN+
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
GK +G K+ EM R + +VVT++ LI KE ++ EA+ L ++M GI+P+ ITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N LIDGFC +A ++F+ + S G P +VTY++LI ++ KA L RE+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
+G+ P+ +TY L+ F +S + A E++ M G P V TYG+L+ GLC G + +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++F M ++++ +YN++I G C A L +++KG+ P++ +Y+ IG
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC+ G EA++L +M + G P YNIL RA
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 230/474 (48%), Gaps = 16/474 (3%)
Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
K RL I+D + + A+ F M+ S P FN L V ++ +D F
Sbjct: 39 KERLRNGIVDIKV-----NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGF- 92
Query: 165 SENRCK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
CK +E D+Y+ I+I C L AF VL + ++G+ P+ + +++L++
Sbjct: 93 ----CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
G C G + A L ++ E+ T + LI GL G + ++M G P
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLL 338
TY +++ C G + LF +M R + +VV Y+ +I LCK+ +A L
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
++M+M GI +V+TY+ LI G C+ G+ D ++ ++ P VVT++ LI F K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
G A +L EM RGI P +TY LID F + + + +A +M+ LM G PD+ TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
+LI+ C + + +LF + L PN + YN ++ G+C+ G A L EM
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
+G+ P++ +Y + LC +G+ +A + +M K + + +YNI+ N
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 212/421 (50%), Gaps = 4/421 (0%)
Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDV 175
LK R+S +AL +M++ G +P T+ +L + KS + LF ++ V
Sbjct: 187 LKGRVS-EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER-AKMLFR 234
+ I+I C+ G + A + N++E G +VV Y+SLI G C +G + AKML
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
IG ++ T++ LI K G + E Y +M G++P TYN LI +C E
Sbjct: 306 MIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
+ E ++FD M + ++VTY+ LI CK RV + RL ++ G+ PN ITYN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
L+ GFC +G+ + A LF ++ S G PSVVTY +L+ G A ++ +M++
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
+T Y I+I + ++ A+ ++ + G PDV TY V+I GLC KG++ EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
LF M E P+D YN++I + ++ L+ EM G + ++ I +
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 535 L 535
L
Sbjct: 605 L 605
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 1/289 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSEN 167
+ ++ID +K +A +++M+ G+ P + T+NSL+ F ++C + +F
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
E D+ ++ ILI C+A ++ + ++ G PN + Y +L+ G C++G +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
AK LF+++ G+ + TY +L+ GL NG E +EKMQ + ++ + YN +I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H CN KV + + LF + + V +VVTYN +I GLCK+ + EA+ L +MK G +
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
P+ TYN LI + L ++K G S T ++I S
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 31 LFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL- 89
LF S +GL P +I+ L+L S AA+ L +++S + S T LL
Sbjct: 407 LFREISSKGL--IPNTITYN-TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 90 --CHLTQLFPSSS--NPVTKSRL------YESIIDAHLKSRLSDQALFYFHQMLDSGVRP 139
C +L + + KSR+ Y II + D A F + D GV+P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 140 RSNTFNSLLIFVIKSCSFDKGWLFF---SENRCKVELDVYSFGILIKGCCEAGDLNKAFE 196
T+N ++ + K S + + F E+ C D +++ ILI+ L + E
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP--DDFTYNILIRAHLGGSGLISSVE 581
Query: 197 VLNQLEEMGFSPNVVIYTSLID 218
++ +++ GFS + +ID
Sbjct: 582 LIEEMKVCGFSADSSTIKMVID 603
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 222/398 (55%)
Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
E D +F LIKG G +++A +++++ E G P+VV Y S+++G C++GD A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
L RK+ E + A TY+ +I L ++G +++M+ G+ S+ TYN L+ C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
GK ++G L +M RE+ NV+T+N L+ KE ++QEA L +M GISPN+I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
TYN L+DG+C +A + + + N SP +VT+ LI+ + + R +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNM 471
+RG+ + VTY+IL+ F +S ++ A E++ M G PDV TYG+L+ GLC G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 472 KEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
++A ++F + ++K++ V+Y +I G CK G A L + KG+ PN+ +Y+
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
I LC+ G EA +LL +M + G P+ YN L RA
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 231/429 (53%), Gaps = 5/429 (1%)
Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFS---ENRCKVELDVYSFGILIKGCCEAGDLN 192
G P + TFN+L+ + + + EN C + DV ++ ++ G C +GD +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTS 210
Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
A ++L ++EE +V Y+++ID C++G I+ A LF+++ G+ ++ TY L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
GL K G DG + M + P++ T+N L+ + EGK+ E +L+ EM R ++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
N++TYNTL+ G C + R+ EA +LD M SP+++T+ LI G+C D ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
F + G + VTY++L++ F ++G K+A +L +EM G+ P +TY IL+D
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
+ +EKA E++ +QKS + Y +I G+C G +++A LF S+ ++PN +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
Y +MI G CK+G+ A LL +M E G PN +Y++ I +DG + L+ +M
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 553 KLGLKPSVS 561
G S
Sbjct: 571 SCGFSADAS 579
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 3/414 (0%)
Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
+A+ +M+++G +P T+NS++ + +S S L E R V+ DV+++ +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTI 234
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I C G ++ A + ++E G +VV Y SL+ G CK G +L + + +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
V T+ VL+ K G ++ E Y++M G+SP++ TYN L+ YC + ++SE
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
+ D M + + ++VT+ +LI G C RV + ++ + G+ N +TY+ L+ GFC
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
+G+ A LF ++ S+G P V+TY +L+ G + A ++ ++++ + V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
YT +I+ + +E A+ ++ + G P+V TY V+I GLC KG++ EA+ L M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
E PND YN +I + ++G+ + +L+ EM G + +S I +L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 230/506 (45%), Gaps = 50/506 (9%)
Query: 71 LKIISGRITSSSFTPRSLLCHLTQLFPS---------SSNPVTKSRLYESIIDAHLKSRL 121
L++I + + LLC ++ F S + N + RL I+D
Sbjct: 14 LRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIK----- 68
Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
D A+ F +M+ S P F+ + ++ F+ F + + ++Y+ I
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
+I C A+ VL ++ ++G+ P+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTT----------------------------- 159
Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
T+ LI GLF G + ++M NG P + TYN +++ C G S
Sbjct: 160 ------TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
L +M R V +V TY+T+I LC++ + A L +M+ GI +V+TYN L+ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
C AG+ + L + S P+V+T+NVL+ F K G + A++L +EM RGI+P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
+TY L+D + + + +A M LM ++ SPD+ T+ LI G CM + + K+F +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
+ + L N V Y++++ G+C+ G A L EM G++P++ +Y + LC +GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNIL 566
+A + + K + + +Y +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTI 479
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 37/368 (10%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +IID+ + D A+ F +M G++ T+NSL+ + K+ ++ G L +
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 169 CK----------VELDVY--------------------------SFGILIKGCCEAGDLN 192
+ V LDV+ ++ L+ G C L+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
+A +L+ + SP++V +TSLI G C ++ +FR I + GLVA TY++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
G ++G K E +++M +GV P + TY L+ C+ GK+ + ++F++++ ++
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
+V Y T+I G+CK +V++A L + G+ PNV+TY +I G C G +A L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 373 FNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
+++ +G +P+ TYN LIRA + G+ ++ L+ EM+ G + + ++ID +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL- 589
Query: 433 SDDMEKAF 440
S +++K+F
Sbjct: 590 SGELDKSF 597
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 237/448 (52%), Gaps = 3/448 (0%)
Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
S+++ + + +A+ QM +P + TFN+L+ +F+ S + R
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
+ D++++G ++ G C+ GD++ A +L ++E+ +VVIYT++ID C ++
Sbjct: 215 -GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
A LF ++ G+ TY LI L G D M ++P++ T++ LI
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
+ EGK+ E KL+DEM R + ++ TY++LI G C R+ EA+ + + M P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
NV+TYN LI GFC A ++ LF ++ G + VTYN LI+ +AG+ MA +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
++M G+ P +TY+IL+D + +EKA ++ +QKS PD+YTY ++I G+C
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
G +++ LF S+ ++PN ++Y MI G+C++G A L EM E G +PN +Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
++ I +DG + L+ +M G
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGF 601
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 215/394 (54%)
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
+F LI G ++A +++++ G P++ Y ++++G CK GDI+ A L +K+
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
+ + A YT +I L D + +M G+ P++ TYN LI CN G+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
S+ +L +M R++ NVVT++ LI KE ++ EAE+L D+M I P++ TY+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I+GFC D+A +F + S P+VVTYN LI+ F KA + +L REM +RG+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
+ VTY LI ++ D + A +++ M G PD+ TY +L+ GLC G +++A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
+F + ++K+EP+ YN+MI G CK G L ++ KG+ PN+ Y++ I C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
+ G EA+ L +M + G P+ YN L RA+
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Score = 232 bits (591), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 219/448 (48%), Gaps = 7/448 (1%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSF 178
D A+ F +M+ S P FN LL + K FD L S ++ D+YS+
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD---LVISLGERMQNLRISYDLYSY 118
Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
ILI C L A VL ++ ++G+ P++V +SL++G C I A L ++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
+ T+ LI GLF + + ++M G P L+TY +++ C G +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
L +M ++ +VV Y T+I LC V +A L +M GI PNV+TYN LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
C+ G A RL + + +P+VVT++ LI AF K G A L EM +R I P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
TY+ LI+ F D +++A M+ LM P+V TY LI G C ++E +LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
M + L N V YN +I G + G+ A ++ +M G+ P+I +YS + LC+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
GK +A V+ + K ++P + YNI+
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 221/454 (48%), Gaps = 4/454 (0%)
Query: 92 LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
+ Q+F P T + + ++I + +A+ +M+ G +P T+ +++ +
Sbjct: 173 VDQMFVMEYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 152 IKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
K D L + K+E DV + +I C ++N A + +++ G PNV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEK 270
V Y SLI C G A L + E + T++ LI K G + + Y++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
M + P ++TY+ LI+ +C ++ E +F+ M ++ NVVTYNTLI G CK R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
V+E L +M G+ N +TYN LI G AG+ D A ++F ++ S+G P ++TY++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
L+ K G + A + +++ + P TY I+I+ ++ +E ++++ + G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
P+V Y +I G C KG +EA LF M E PN YN +I ++G+ +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEA 544
L+ EM G V + ++ S I +L DG+ ++
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 136/275 (49%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
K+ + LF EM ++V +N L+ + K + L ++M+ IS ++ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
LI+ FC + A + ++ G P +VT + L+ + A LV +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
P+ VT+ LI + +A + M G PD++TYG +++GLC +G++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
L M + K+E + V+Y +I C N AL L EM+ KG+ PN+ +Y+S I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC G+W +A LL+ M++ + P+V ++ L A
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
Y ++D K ++AL F + S + P T+N ++ + K+ + GW LF S +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
V+ +V + +I G C G +A + +++E G PN Y +LI ++GD
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
+ L +++ G V T +++I L L+K E
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 242/457 (52%), Gaps = 8/457 (1%)
Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
+S+LS AL +M+ G P T +SLL S + VE+
Sbjct: 131 RSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ---MVEMGYKP 186
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D ++F LI G ++A +++Q+ + G P++V Y ++++G CK GDI+ A L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
+K+ + + A Y +I GL K D + +M G+ P ++TY+ LI CN
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G+ S+ +L +M R++ NVVT++ LI KE ++ EAE+L D+M I P++ TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
+ LI+GFC D+A +F + S P+VVTY+ LI+ F KA + +L REM +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ + VTYT LI F ++ D + A ++ M G P++ TY +L+ GLC G + +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A +F + + +EP+ YN+MI G CK G L ++ KG+ PN+ +Y++ I
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
C+ G EA+ LL +M + G P+ YN L RA+
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 241/453 (53%), Gaps = 3/453 (0%)
Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
S+++ + S+ A+ QM++ G +P + TF +L+ +F+ S + L +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS-EAVALVDQMVQ 216
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
+ D+ ++G ++ G C+ GD++ A +L ++E+ +VVIY ++IDG CK ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
A LF ++ G+ TY+ LI L G D M ++P++ T++ LI
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
+ EGK+ E KL+DEM R + ++ TY++LI G C R+ EA+ + + M P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
NV+TY+ LI GFC A ++ LF ++ G + VTY LI F +A + A +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
++M G+ P+ +TY IL+D ++ + KA ++ +Q+S PD+YTY ++I G+C
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
G +++ +LF ++ + PN + YN MI G+C++G+ A LL +M E G +PN +Y
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
++ I +DG + L+ +M G S
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 227/456 (49%), Gaps = 6/456 (1%)
Query: 117 LKSRLSD-----QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-K 170
L++RLSD A+ F M+ S P FN LL V K F+ + +
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
+ D+Y++ I I C L+ A VL ++ ++G+ P++V +SL++G C + I A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
L ++ E+G T+T LI GLF + + ++M G P L TY +++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
C G + L +M ++ +VV YNT+I GLCK + +A L +M GI P+V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
TY+ LI C+ G A RL + + +P+VVT++ LI AF K G A L E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
M +R I P TY+ LI+ F D +++A M+ LM P+V TY LI G C
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
++E +LF M + L N V Y +I G+ + + A + +M G+ PNI +Y+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ LC++GK +A V+ + + ++P + YNI+
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 188/362 (51%), Gaps = 7/362 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
+Y +IID K + D AL F +M + G+RP T++SL+ + C++ D L
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL---CNYGRWSDASRLL 316
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ +V +F LI + G L +A ++ +++ + P++ Y+SLI+G C +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
++ AK +F + TY+ LI G K ++G E + +M G+ + TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
LIH + +F +M V N++TYN L+ GLCK ++ +A + + ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ + P++ TYN +I+G C AG+ + + LF L G SP+V+ YN +I F + G+ +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A L+++M+E G P+ TY LI + +R D E + E+ M+ GF+ D T G++ +
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Query: 464 GL 465
L
Sbjct: 617 ML 618
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%)
Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
E+MQ G+S LYTY+ I+ +C ++S + +M ++VT ++L+ G C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
R+ +A L+DQM G P+ T+ LI G + +A L +Q+ G P +VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
++ K G+ +A L+++ME+ I V Y +ID + M+ A +++ M
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
G PDV+TY LI LC G +AS+L + M E K+ PN V ++ +I + KEG
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
A +L EM ++ + P+I +YSS I C + EA+ + M+ P+V Y+ L +
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 569 A 569
Sbjct: 407 G 407
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 142/275 (51%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
KV + LF +M ++V +N L+ + K + + L +QM+ GIS ++ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
I+ FC + A + ++ G P +VT + L+ + + A LV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P T+T LI + +A + M + G PD+ TYG +++GLC +G++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
L M + K+E + V+YN +I G CK + AL L EM+ KG+ P++ +YSS I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC G+W +A LL+ M++ + P+V ++ L A
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 36/190 (18%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y ++I ++R D A F QM+ GV P T+N LL + K+ K + F
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 168 RCKVELDVYSFGILIKG-----------------------------------CCEAGDLN 192
R +E D+Y++ I+I+G C G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
+A +L +++E G PN Y +LI ++GD E + L +++ G T ++
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 253 CGLFKNGLQK 262
L L K
Sbjct: 616 NMLHDGRLDK 625
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 247/463 (53%), Gaps = 9/463 (1%)
Query: 99 SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
+S+ V+ L E + L+ + A+ F M+ S P FN LL ++K +D
Sbjct: 43 ASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD 102
Query: 159 KGWLFFSENRCKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
+ S + K+E+ D+Y+F I+I C ++ A +L ++ ++G+ P+ V
Sbjct: 103 ---VVISLGK-KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 158
Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
SL++G C+ + A L K+ E+G Y +I L K D F+F+++++
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
G+ P++ TY L++ CN + S+ +L +M +++ NV+TY+ L+ K +V E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
A+ L ++M I P+++TY+ LI+G C D+A ++F+ + S G VV+YN LI
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
F KA + L REM +RG+ + VTY LI F ++ D++KA E +S M G SP
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
D++TY +L+ GLC G +++A +F M + +++ + V Y +I G CK G A L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
++ KGL P+I +Y++ + LC G E E L +M + GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 233/467 (49%), Gaps = 19/467 (4%)
Query: 103 VTKSRLYESIID------AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
+ KSR + SI+D A +K + D + +M G+R TFN ++ C
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN--IVINCFCCC 133
Query: 157 FDKGW---LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIY 213
F + + E D + G L+ G C ++ A +++++ E+G+ P++V Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 214 TSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQL 273
++ID CK + A F++I G+ TYT L+ GL + D M
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
++P++ TY+ L+ + GKV E +LF+EM + ++VTY++LI GLC R+ E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 334 AERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
A ++ D M G +V++YN LI+GFC A + +LF ++ G + VTYN LI+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
F +AG+ A + +M+ GI+P TY IL+ + ++EKA ++ MQK
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
D+ TY +I G+C G ++EA LF S+ L+P+ V Y M+ G C +G + L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
+M ++GL+ N + S DG + L+ +ML G PS+
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSL 532
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)
Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
LN A ++ + + + P++V + L+ K + L +K+ LG+ +T+ +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 251 LI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
+I C F+ L KM G P T L++ +C +VS+ L D+M
Sbjct: 126 VINCFCCCFQVSL---ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
++V YN +I LCK RV +A +++ GI PNV+TY L++G C++
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
A RL + + +P+V+TY+ L+ AF K G A +L EM I P VTY+ LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
+ D +++A +M+ LM G DV +Y LI+G C +++ KLF M + L
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
N V YN +I G+ + G+ +A +M+ G+ P+I +Y+ +G LC +G+ +A V+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 548 LNQMLKLGLKPSVSLYNILYRA 569
M K + + Y + R
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRG 444
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
K+++ LF +M ++V +N L+ + K + L +M++ GI ++ T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
+I+ FC + A + ++ G P VT L+ F + A LV +M E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P V Y +IDS ++ + AF+ + +++ G P+V TY L++GLC +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
++L + M + K+ PN + Y+ ++ + K G A L EM + P+I +YSS I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
LC + EA + + M+ G V YN L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%)
Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
+++++ +A L M + P+++ +N+L+ + D L +++ G +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
T+N++I F +A ++ +M + G P VT L++ F R + + A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
+ G+ PD+ Y +I LC + +A F + + PN V Y ++ G C
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A RLL +M +K + PN+ +YS+ + ++GK EA+ L +M+++ + P + Y+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 242/462 (52%), Gaps = 7/462 (1%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
+I+ + R A +++ G P + FN+LL + C + V
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR---MV 185
Query: 172 EL----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
E+ + + L+ G C G ++ A +++++ E GF PN V Y +++ CK+G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A L RK+ E + Y+++I GL K+G + F + +M++ G + TYN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+CN G+ +G KL +M R+++ NVVT++ LI KE +++EA++LL +M GI+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PN ITYN LIDGFC ++A ++ + + S G P ++T+N+LI + KA +L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
REM RG+ + VTY L+ F +S +E A +++ M PD+ +Y +L+ GLC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
G +++A ++F + ++K+E + +Y ++I G C A L + KG+ + +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
Y+ I LC+ +A++L +M + G P YNIL RA
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 265/524 (50%), Gaps = 5/524 (0%)
Query: 50 ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLY 109
++R+++ ++SS + Q +L+ + RI + P LL + F + S+ ++ Y
Sbjct: 1 MVRMMIRRLSSQASRFVQPRLLETGTLRIALIN-CPNELLFCCERGFSTFSD---RNLSY 56
Query: 110 ESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC 169
+ + L +D A+ F M+ S P FN L + K+ ++ +
Sbjct: 57 RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 170 K-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
K + +Y+ I+I C L+ AF + ++ ++G+ P+ VI+ +L++G C +
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
A L ++ E+G T T L+ GL NG D ++M G P+ TY +++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
C G+ + +L +M R + + V Y+ +I GLCK+ + A L ++M++ G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
++ITYN LI GFC+AG D +L + SP+VVT++VLI +F K G + A L+
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
+EM +RGI P+ +TY LID F + + +E+A +M LM G PD+ T+ +LI+G C
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
+ + +LF M + N V YN ++ G+C+ G A +L EM + + P+I SY
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
+ LC +G+ +A + ++ K ++ + +Y I+ N
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 233/446 (52%), Gaps = 2/446 (0%)
Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDV 175
L+ R+S +AL +M++ G +P T N+L+ + D L + +
Sbjct: 170 LECRVS-EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
++G ++ C++G A E+L ++EE + V Y+ +IDG CK+G ++ A LF +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
+ G A TY LI G G DG + M +SP++ T++ LI + EGK
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
+ E +L EM R +A N +TYN+LI G CKE R++EA +++D M G P+++T+N
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
LI+G+C A D LF ++ G + VTYN L++ F ++G ++A L +EM R
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
+ P V+Y IL+D + ++EKA E++ ++KS D+ Y ++IHG+C + +A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
LF S+ ++ + YN+MI C++ + +A L +M E+G P+ +Y+ I
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVS 561
D A L+ +M G VS
Sbjct: 589 LGDDDATTAAELIEEMKSSGFPADVS 614
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 215/421 (51%), Gaps = 4/421 (0%)
Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
L ++SD A+ +M+++G +P T+ +L + KS + L E R ++LD
Sbjct: 205 LNGKVSD-AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLD 262
Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
+ I+I G C+ G L+ AF + N++E GF +++ Y +LI G C G + L R
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
+ + + T++VLI K G ++ + ++M G++P+ TYN LI +C E
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
++ E ++ D M + +++T+N LI G CK R+ + L +M + G+ N +TYN
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
L+ GFC +G+ + A +LF ++ S P +V+Y +L+ G + A ++ ++E+
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
+ Y I+I + ++ A++++ + G D Y ++I LC K ++ +A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
LF M E P+++ YN++I + + ++ A L+ EM G ++++ I +
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Query: 535 L 535
L
Sbjct: 623 L 623
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 38/378 (10%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
Y IID K D A F++M G + T+N+L+ + +D G +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ K+ +V +F +LI + G L +A ++L ++ + G +PN + Y SLIDG CK +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A + + G T+ +LI G K DG E + +M L GV + TYN L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+C GK+ KLF EM R V ++V+Y L+ GLC +++A + +++ + +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLF---------------------------------- 373
++ Y +I G C+A + D A+ LF
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 374 -NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVR 432
++ G +P +TYN+LIRA ++ A++L+ EM+ G P++V+ ++ + +
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLS 624
Query: 433 SDDMEKAF-EMYSLMQKS 449
S +++K+F +M S + S
Sbjct: 625 SGELDKSFLDMLSTTRAS 642
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 99 SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
S N VT S L +S + K R +DQ L +M+ G+ P + T+NSL+ K +
Sbjct: 330 SPNVVTFSVLIDSFVKEG-KLREADQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 159 KGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
+ K + D+ +F ILI G C+A ++ E+ ++ G N V Y +L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
G C++G +E AK LF+++ + +Y +L+ GL NG + E + K++ + +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
+ Y +IH CN KV + + LF + + V + YN +I LC++ + +A+ L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
+M G +P+ +TYN LI + A L ++KS+G V T ++I S
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 217/396 (54%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D+ + L+ G C +G +A +++++ E G PN V Y +++ CK+G A L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
RK+ E + Y+++I GL K+G + F + +M++ G++ ++ TYN LI +CN
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G+ +G KL +M R++ NVVT++ LI KE +++EAE L +M GI+P+ ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
LIDGFC DKA ++ + + S G P++ T+N+LI + KA +L R+M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ VTY LI F + A E++ M P++ TY +L+ GLC G ++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++F + ++K+E + +YN++I G C A L + KG+ P + +Y+ IG
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC+ G EAE+L +M + G P YNIL RA
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 261/525 (49%), Gaps = 7/525 (1%)
Query: 50 ILRLLLSKMSSHSHAAAQTLILKIISGRIT-SSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
+++L++ ++SS Q +L+ + RI + S C S N + RL
Sbjct: 1 MVKLMIRRLSSQVSKFVQPRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERL 60
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
++D +D A+ F M+ S P F+ L + K+ +D +
Sbjct: 61 RSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K + ++Y+ I+I C L AF + ++ ++G+ PN + +++LI+G C G +
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A L ++ E+G T L+ GL +G + + +KM G P+ TY ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ C G+ + +L +M R + + V Y+ +I GLCK + A L ++M+M GI+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
N+ITYN LI GFC+AG D +L + +P+VVT++VLI +F K G + A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+EM RGI P +TYT LID F + + ++KA +M LM G P++ T+ +LI+G C
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
+ + +LF M + + V YN +I G+C+ G A L EM + + PNI +
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
Y + LC +G+ +A + ++ K ++ + +YNI+ N
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 239/464 (51%), Gaps = 9/464 (1%)
Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
N +T S L + L+ R+S +AL +M++ G +P T N+L+ + S +
Sbjct: 157 NTITFSTLINGLC---LEGRVS-EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 161 WLFFS---ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
L E C+ + ++G ++ C++G A E+L ++EE + V Y+ +I
Sbjct: 213 MLLIDKMVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 218 DGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVS 277
DG CK+G ++ A LF ++ G+ TY +LI G G DG + M ++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERL 337
P++ T++ LI + EGK+ E +L EM HR +A + +TY +LI G CKE + +A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 338 LDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
+D M G PN+ T+N LI+G+C A D LF ++ G VTYN LI+ F +
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
G +A +L +EM R + P+ VTY IL+D + + EKA E++ ++KS D+
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
Y ++IHG+C + +A LF S+ ++P YN+MI G CK+G A L +M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVS 561
E G P+ +Y+ I DG ++ L+ ++ + G S
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 217/423 (51%), Gaps = 4/423 (0%)
Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELDVYSFGIL 181
+A+ +M++ G +P + T+ +L + KS + L E R ++LD + I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSII 269
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I G C+ G L+ AF + N++E G + N++ Y LI G C G + L R + + +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
T++VLI K G ++ E +++M G++P TY LI +C E + + +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
+ D M + N+ T+N LI G CK R+ + L +M + G+ + +TYN LI GFC
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
+ G+ + A LF ++ S P++VTY +L+ G S+ A ++ ++E+ +
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
Y I+I + ++ A++++ + G P V TY ++I GLC KG + EA LF M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
E P+ YN++I + +G++ ++++L+ E+ G + ++ I +L DG+
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRL 628
Query: 542 PEA 544
++
Sbjct: 629 KKS 631
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
+ +ID+ +K +A +M+ G+ P + T+ SL+ K DK
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K + ++ +F ILI G C+A ++ E+ ++ G + V Y +LI G C+ G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
AK LF+++ + TY +L+ GL NG + E +EK++ + + + YN +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H CN KV + + LF + + V V TYN +I GLCK+ + EAE L +M+ G +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
P+ TYN LI G+ K+ +L +LK G S T ++I S
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 229/434 (52%), Gaps = 2/434 (0%)
Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
+R+SD A+ QM++ G +P S TFN+L+ + + + K + D+ +
Sbjct: 165 NRISD-AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
+GI++ G C+ GD++ A +L ++E+ P VVIY ++ID C ++ A LF ++
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
G+ TY LI L G D M ++P++ T++ LI + EGK+
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
E KL+DEM R + ++ TY++LI G C R+ EA+ + + M PNV+TYN LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
GFC A D+ LF ++ G + VTY LI F +A A + ++M G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
P +TY+IL+D + +E A ++ +Q+S PD+YTY ++I G+C G +++ L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
F S+ ++PN V Y M+ G+C++G A L EM E+G +P+ +Y++ I +
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 538 DGKWPEAEVLLNQM 551
DG + L+ +M
Sbjct: 584 DGDKAASAELIREM 597
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 234/453 (51%), Gaps = 2/453 (0%)
Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVY 176
+S+LS AL +M+ G P T NSLL F + D L + D +
Sbjct: 129 RSQLS-LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
+F LI G ++A +++++ G P++V Y +++G CK GDI+ A L +K+
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
+ + Y +I L D + +M G+ P++ TYN LI CN G+
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
S+ +L +M R++ NVVT++ LI KE ++ EAE+L D+M I P++ TY+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I+GFC D+A +F + S P+VVTYN LI+ F KA +L REM +RG+
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
+ VTYT LI F ++ + + A ++ M G PD+ TY +L+ GLC G ++ A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
+F + +K+EP+ YN+MI G CK G L ++ KG+ PN+ +Y++ + C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+ G EA+ L +M + G P YN L RA
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 215/445 (48%), Gaps = 1/445 (0%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGIL 181
D A+ F M+ S P F+ LL + K FD + + ++Y++ IL
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I C L+ A VL ++ ++G+ P++V SL++G C I A L ++ E+G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
T+ LI GLF++ + ++M + G P L TY +++ C G +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
L +M ++ VV YNT+I LC V +A L +M GI PNV+TYN LI C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
+ G A RL + + +P+VVT++ LI AF K G A L EM +R I P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
TY+ LI+ F D +++A M+ LM P+V TY LI G C + E +LF M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
+ L N V Y +I G+ + A + +M G++P+I +YS + LC +GK
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
A V+ + + ++P + YNI+
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIM 507
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 7/362 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
+Y +IIDA + + AL F +M + G+RP T+NSL+ + C++ D L
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL---CNYGRWSDASRLL 314
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ +V +F LI + G L +A ++ +++ + P++ Y+SLI+G C +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
++ AK +F + TY LI G K +G E + +M G+ + TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
LIH + + +F +M V +++TY+ L+ GLC +V+ A + + ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ + P++ TYN +I+G C AG+ + + LF L G P+VVTY ++ F + G +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A L REM+E G P TY LI + +R D + E+ M+ F D T G++ +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
Query: 464 GL 465
L
Sbjct: 615 ML 616
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%)
Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
Y Y + N+ K+ + LF +M ++V ++ L+ + K + L +Q
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
M+ GIS N+ TY+ LI+ FC + A + ++ G P +VT N L+ F
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
A LV +M E G P T+ LI R + +A + M G PD+ TYG+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
+++GLC +G++ A L M + K+EP V+YN +I C N AL L EM+ KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+ PN+ +Y+S I LC G+W +A LL+ M++ + P+V ++ L A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
Y ++D + + AL F + S + P T+N ++ + K+ + GW LF S +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
V+ +V ++ ++ G C G +A + +++E G P+ Y +LI ++GD
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
+ L R++ V T ++ L L K
Sbjct: 589 ASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDK 623
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 232/438 (52%), Gaps = 9/438 (2%)
Query: 87 SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
L C + Q S P+ + ++ KS+ D + FH M G+ ++N
Sbjct: 55 DLFCKMIQ-----SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 147 LLIFVIKSCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMG 205
++ + + F + + E DV + LI G C+ + A ++++++EEMG
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 206 FSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
F P+VVIY ++IDG CK G + A LF ++ G+ A TY L+ GL +G D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 266 EFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGL 325
M + + P++ T+ +I + EGK SE KL++EM R V +V TYN+LI GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 326 CKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
C RV EA+++LD M G P+V+TYN LI+GFC + D+ +LF ++ G
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
+TYN +I+ + +AG A ++ M+ R P+ TY+IL+ + +EKA ++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
MQKS D+ TY ++IHG+C GN+++A LF S+ L+P+ V Y MI G+C++
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 506 SYRALRLLGEMNEKGLVP 523
++ L +M E GL+P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 242/462 (52%), Gaps = 7/462 (1%)
Query: 101 NPVTK---SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
NPV SR + S ++ + F +M+ S P F+ +L + KS ++
Sbjct: 26 NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85
Query: 158 DKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
D LF C + D+YS+ I+I C A V+ ++ + G+ P+VV +SL
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
I+G C+ + A L K+ E+G Y +I G K GL D E +++M+ +GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
TYN L+ C G+ S+ +L +M R++ NV+T+ +I KE + EA +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
L ++M + P+V TYN LI+G C G D+A ++ + + + G P VVTYN LI F
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
K+ + L REM +RG+ +TY +I + ++ + A E++S M P++
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIR 382
Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
TY +L++GLCM +++A LF +M ++++E + YN++I G CK GN A L +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKP 558
+ KGL P++ SY++ I C+ +W ++++L +M + GL P
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 3/300 (1%)
Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
+ M++ G+ LY+YN +I+ C + + +M +VVT ++LI G C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
+ RV +A L+ +M+ G P+V+ YN +IDG C G + A LF++++ +G V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
TYN L+ +G A+ L+R+M R I P+ +T+T +ID FV+ +A ++Y M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
+ PDV+TY LI+GLCM G + EA ++ + M P+ V YN +I G+CK
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+L EM ++GLV + +Y++ I Q G+ A+ + ++M +P++ Y+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 129/271 (47%)
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
+ E LF +M ++V ++ ++ + K L M++ GI ++ +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
+I+ C A + ++ G P VVT + LI F + A DLV +MEE G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
P V Y +ID + + A E++ M++ G D TY L+ GLC G +A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
+L M + PN + + +I + KEG A++L EM + + P++ +Y+S I L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
C G+ EA+ +L+ M+ G P V YN L
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 123/238 (51%)
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
M ++E L +M + P+++ ++K++ + D LF+ ++ G + +Y
Sbjct: 48 MNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
N++I + +A +V +M + G P VT + LI+ F + + + A ++ S M++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
GF PDV Y +I G C G + +A +LF+ M + + V YN ++ G C G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A RL+ +M + +VPN+ ++++ I V ++GK+ EA L +M + + P V YN L
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 235/449 (52%), Gaps = 2/449 (0%)
Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
+R+S +A+ QM++ G +P + TF +L+ + + + K + D+ +
Sbjct: 149 NRIS-EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
+G +I G C+ G+ + A +LN++E+ +VVIY+++ID CK ++ A LF ++
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
G+ TY+ LI L G D M ++P++ T+N LI + EGK+
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
E KLFDEM R + N+VTYN+LI G C R+ EA+++ M P+V+TYN LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
+GFC A + LF + G + VTY LI F +A + A + ++M G+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
P+ +TY L+D ++ +EKA ++ +QKS PD+YTY ++ G+C G +++ L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
F S+ ++P+ + YN MI G+CK+G A L +M E G +P+ +Y++ I +
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
DG + L+ +M S Y ++
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 229/449 (51%), Gaps = 7/449 (1%)
Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL----DVYSFGI 180
AL +M+ G P T NSLL + + VE+ D +F
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ---MVEMGYQPDTVTFTT 175
Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
L+ G + ++A ++ ++ G P++V Y ++I+G CK G+ + A L K+ +
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
+ A Y+ +I L K D + +M G+ P ++TY+ LI CN G+ S+
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
+L +M R++ NVVT+N+LI KE ++ EAE+L D+M I PN++TYN LI+GF
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
C D+A ++F + S P VVTYN LI F KA +L R+M RG+ +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
VTYT LI F ++ D + A ++ M G P++ TY L+ GLC G +++A +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
+ ++K+EP+ YN+M G CK G L ++ KG+ P++ +Y++ I C+ G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
EA L +M + G P YN L RA
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 231/452 (51%), Gaps = 4/452 (0%)
Query: 116 HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELD 174
HLK D+A+ F +M+ S P F+ LL + K FD F + V +
Sbjct: 43 HLKL---DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN 99
Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
+Y++ I+I C L+ A +L ++ ++G+ P++V SL++G C I A L
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
++ E+G T+T L+ GLF++ + E+M + G P L TY +I+ C G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
+ L ++M ++ +VV Y+T+I LCK V +A L +M GI P+V TY+
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
LI C+ G A RL + + +P+VVT+N LI AF+K G A L EM +R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
I P+ VTY LI+ F D +++A ++++LM PDV TY LI+G C + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
+LF M L N V Y +I G+ + + A + +M G+ PNI +Y++ +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
LC++GK +A V+ + K ++P + YNI+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 34/389 (8%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y ++ID+ K R D AL F +M + G+RP
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP---------------------------- 273
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
DV+++ LI C G + A +L+ + E +PNVV + SLID K G +
Sbjct: 274 ------DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A+ LF ++ + + TY LI G + + + + M P + TYN LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ +C KV +G +LF +M R + N VTY TLI G + A+ + QM G+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PN++TYN L+DG C G+ +KA +F L+ + P + TYN++ KAG + DL
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+ +G+ P + Y +I F + E+A+ ++ M++ G PD TY LI
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMM 496
G+ +++L M + + Y ++
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
G++ +GL DG+ EK+ + N L+H K+ E LF EM
Sbjct: 21 GIYFSGLSYDGYR--EKL----------SRNALLHL-----KLDEAVDLFGEMVKSRPFP 63
Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
++V ++ L+ + K + ++M++ G+S N+ TYN +I+ C + A +
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
++ G PS+VT N L+ F A LV +M E G P VT+T L+ +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
+ +A + M G PD+ TYG +I+GLC +G A L N M + K+E + V+Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
+ +I CK + AL L EM+ KG+ P++ +YSS I LC G+W +A LL+ ML+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 554 LGLKPSVSLYNILYRA 569
+ P+V +N L A
Sbjct: 304 RKINPNVVTFNSLIDA 319
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL 162
V + Y ++I ++ D A F QM+ GV P T+N+LL + K+ +K +
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 163 FF------------------SENRCK------------------VELDVYSFGILIKGCC 186
F SE CK V+ DV ++ +I G C
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 187 EAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQH 246
+ G +A+ + +++E G P+ Y +LI ++GD + L +++
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS 591
Query: 247 TYTVLICGLFKNGLQKDGF 265
TY L+ + +G GF
Sbjct: 592 TYG-LVTDMLHDGRLDKGF 609
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 238/495 (48%), Gaps = 36/495 (7%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y ++ID+ K R +A F +M G+RP T++ L+ + D F E
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
++L VY + LI G C+ GD++ A + ++ P VV YTSL+ G C G I
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
+A L+ ++ G+ + +T+T L+ GLF+ GL +D + + +M V P+ TYN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I YC EG +S+ F+ EM + + + +Y LI GLC + EA+ +D +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
N I Y L+ GFC G+ ++A + ++ G +V Y VLI K + K+
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
L++EM +RG+ P +V YT +ID+ ++ D ++AF ++ LM G P+ TY +I+GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 467 MKGNMKEASKLFNSMWETKLEPNDV----------------------------------- 491
G + EA L + M PN V
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
YNM+I G+C++G A L+ M G+ P+ +Y++ I LC+ +A L N M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 552 LKLGLKPSVSLYNIL 566
+ G++P YN L
Sbjct: 849 TEKGIRPDRVAYNTL 863
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 224/447 (50%), Gaps = 2/447 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
++ +I +++SR + F M+ + P T ++LL ++K F F++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+ DVY + +I+ CE DL++A E++ +E G N+V Y LIDG CK +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
A + + + L TY L+ GL K + G E ++M SPS + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
+ GK+ E L + V+ N+ YN LI LCK + EAE L D+M G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
PN +TY+ LID FC G+ D A ++ G SV YN LI K G+ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
+ EM + + P+ VTYT L+ + + KA +Y M G +P +YT+ L+ GL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
G +++A KLFN M E ++PN V YN+MI GYC+EG+ +A L EM EKG+VP+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLK 553
SY I LC G+ EA+V ++ + K
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHK 605
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 205/403 (50%), Gaps = 10/403 (2%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
DV ++ L+ G C+ + E+++++ + FSP+ +SL++G K G IE A L
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
+++ + G+ Y LI L K + +++M G+ P+ TY+ LI +C
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
GK+ EM + +V YN+LI G CK + AE + +M + P V+TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
L+ G+C G+ +KA RL++++ G +PS+ T+ L+ +AG + A L EM E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
+ P+ VTY ++I+ + DM KAFE M + G PD Y+Y LIHGLC+ G E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A + + + E N++ Y ++ G+C+EG AL + EM ++G+ ++ Y G
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY----G 651
Query: 534 VLCQDGKWPEAEV-----LLNQMLKLGLKPSVSLYNILYRAKN 571
VL DG + LL +M GLKP +Y + AK+
Sbjct: 652 VLI-DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 232/491 (47%), Gaps = 36/491 (7%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +ID K + +A+ + ++P T+ +L+ + K F+ G E
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
C + + L++G + G + +A ++ ++ + G SPN+ +Y +LID CK
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A++LF ++G++GL TY++LI + G F +M G+ S+Y YN LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ +C G +S EM ++++ VVTY +L+ G C + ++ +A RL +M GI+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P++ T+ L+ G AG A +LFN++ P+ VTYNV+I + + G+ A +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 408 VREMEERGITP-----------------------------------SEVTYTILIDSFVR 432
++EM E+GI P +E+ YT L+ F R
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 433 SDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVV 492
+E+A + M + G D+ YGVLI G + K L M + L+P+DV+
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 493 YNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML 552
Y MI K G+ A + M +G VPN +Y++ I LC+ G EAEVL ++M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 553 KLGLKPSVSLY 563
+ P+ Y
Sbjct: 745 PVSSVPNQVTY 755
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 40/420 (9%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y S++ + ++AL +H+M G+ P TF +LL + ++ F+E
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP------------------- 208
V+ + ++ ++I+G CE GD++KAFE L ++ E G P
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 209 ----------------NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
N + YT L+ G C+ G +E A + +++ + G+ Y VLI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
G K+ +K F ++M G+ P Y +I G E F ++D M +
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD--KAF 370
N VTY +I GLCK V EAE L +M+ PN +TY +D GE D KA
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAV 773
Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
L N + G + TYN+LIR F + G + AS+L+ M G++P +TYT +I+
Sbjct: 774 ELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
R +D++KA E+++ M + G PD Y LIHG C+ G M +A++L N M L PN+
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 2/299 (0%)
Query: 270 KMQLNGVS--PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
KM + VS P + T + L+H +LF++M + +V Y +I LC+
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239
Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
+ A+ ++ M+ G N++ YN LIDG C + +A + L P VVT
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
Y L+ K ++ +++ EM +PSE + L++ + +E+A + +
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
G SP+++ Y LI LC EA LF+ M + L PNDV Y+++I +C+ G
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
AL LGEM + GL ++ Y+S I C+ G AE + +M+ L+P+V Y L
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 4/254 (1%)
Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
V+LD+ +G+LI G + D F +L ++ + G P+ VIYTS+ID K GD + A
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
++ + G V + TYT +I GL K G + KMQ P+ TY C + +
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DI 761
Query: 291 CNEGKVS--EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
+G+V + +L + + +A N TYN LI G C++ R++EA L+ +M G+SP
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
+ ITY +I+ C + KA L+N + G P V YN LI AG A++L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 409 REMEERGITPSEVT 422
EM +G+ P+ T
Sbjct: 881 NEMLRQGLIPNNKT 894
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 56/253 (22%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y S+IDA K+ +A + M++ G P T+ +++ + K+ G++ +E
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA-----GFVNEAEV 738
Query: 168 RCKVELDVYS----------FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLI 217
C V S IL KG D+ KA E+ N + + G N Y LI
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKG---EVDMQKAVELHNAILK-GLLANTATYNMLI 794
Query: 218 DGCCKNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
G C+ G IE A +++ R IG+ GV
Sbjct: 795 RGFCRQGRIEEASELITRMIGD------------------------------------GV 818
Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
SP TY +I+E C V + +L++ M + + + V YNTLI G C + +A
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 337 LLDQMKMAGISPN 349
L ++M G+ PN
Sbjct: 879 LRNEMLRQGLIPN 891
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 226/429 (52%), Gaps = 5/429 (1%)
Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILI 182
+A+ F QM++ G+ P TFN+L+ ++ + L + +DV ++G ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
G C+ GD A +L+++EE P+VVIY+++ID CK+G A+ LF ++ E G+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
TY +I G G D M ++P + T+N LI EGK+ E KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
DEM HR + + VTYN++I G CK R +A+ + D M SP+V+T+N +ID +C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
A D+ +L ++ G + TYN LI F + N A DL +EM G+ P +T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
IL+ F ++ +E+A E++ ++Q S D Y ++IHG+C + EA LF S+
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
+EP+ YN+MI G+C + A L +M + G P+ ++Y++ I + G+
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 543 EAEVLLNQM 551
++ L+++M
Sbjct: 625 KSIELISEM 633
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 208/395 (52%), Gaps = 4/395 (1%)
Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
V +F LI G C G + +A ++N++ G +VV Y ++++G CK GD + A L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
K+ E + Y+ +I L K+G D + +M G++P+++TYNC+I +C+ G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
+ S+ +L +M RE+ +V+T+N LI KE ++ EAE+L D+M I P+ +TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
+I GFC D A +F+ + SP VVT+N +I + +A L+RE+ R
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G+ + TY LI F D++ A +++ M G PD T +L++G C ++EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
+LF + +K++ + V YN++I G CK A L + G+ P++ +Y+ I
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
C +A VL ++M G +P S YN L R
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 198/397 (49%), Gaps = 24/397 (6%)
Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
++ L++YSF ILIK C+ L+ + +L ++GF P+VV + +L+ G C I A
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
LF + E G + + +++M G++P + T+N LI+
Sbjct: 196 LALFGYMVETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLING 235
Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
C EG+V E L ++M + + +VVTY T++ G+CK + A LL +M+ I P+
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
V+ Y+ +ID C G A LF+++ G +P+V TYN +I F G A L+R
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
+M ER I P +T+ LI + V+ + +A ++ M PD TY +I+G C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
+A +F+ M P+ V +N +I YC+ ++LL E++ +GLV N +Y+
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ I C+ A+ L +M+ G+ P NIL
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 24/346 (6%)
Query: 241 LVATQHTYTVLIC----GLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
+V ++ YT + C G+F + D Y KM++ + ++Y++N LI +C+ K
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA---------------ERLLDQ 340
+S F ++ +VVT+NTL+ GLC E R+ EA L DQ
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
M G++P VIT+N LI+G C G +A L N++ G VVTY ++ K G+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
+K A +L+ +MEE I P V Y+ +ID + A ++S M + G +P+V+TY
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
+I G C G +A +L M E ++ P+ + +N +I KEG + A +L EM +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ P+ +Y+S I C+ ++ +A+ M L P V +N +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTI 438
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 173/354 (48%), Gaps = 11/354 (3%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
+Y +IID K A + F +ML+ G+ P T+N + + CSF D L
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM---IDGFCSFGRWSDAQRLL 354
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
++ DV +F LI + G L +A ++ +++ P+ V Y S+I G CK+
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
+ AK +F + +V T+ +I + +G + ++ G+ + TY
Sbjct: 415 NRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
N LIH +C ++ LF EM V + +T N L+ G C+ +++EA L + ++M
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ I + + YN +I G C + D+A+ LF L +G P V TYNV+I F
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
A+ L +M++ G P TY LI +++ +++K+ E+ S M+ +GFS D +T
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 44/432 (10%)
Query: 16 LISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIIS 75
+++ M K+ K S N S+ H + I ++ H+ AQ L +++
Sbjct: 267 IVNGMCKMGDTK--SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 76 GRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLK-SRLSDQALFYFHQMLD 134
I + FT Y +ID R SD A M++
Sbjct: 325 KGIAPNVFT------------------------YNCMIDGFCSFGRWSD-AQRLLRDMIE 359
Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL------DVYSFGILIKGCCEA 188
+ P TFN+L+ S S +G LF +E C L D ++ +I G C+
Sbjct: 360 REINPDVLTFNALI-----SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK- 413
Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
+ F+ + ++ SP+VV + ++ID C+ ++ L R+I GLVA TY
Sbjct: 414 ---HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRH 308
LI G + + +++M +GV P T N L++ +C K+ E +LF+ ++
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
++ + V YN +I G+CK +V EA L + + G+ P+V TYN +I GFC
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
A LF+++K NG P TYN LIR KAG + +L+ EM G + T ++ D
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Query: 429 SFVRSDDMEKAF 440
+ ++K+F
Sbjct: 651 -LITDGRLDKSF 661
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 15/289 (5%)
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
+ + FD M V N +I + R A L +M++ I N+ ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK------------- 402
LI FCD + + F +L G P VVT+N L+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 403 --MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
A L +M E G+TP +T+ LI+ + +A + + M G DV TYG
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
+++G+C G+ K A L + M ET ++P+ V+Y+ +I CK+G+ A L EM EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 521 LVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+ PN+ +Y+ I C G+W +A+ LL M++ + P V +N L A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 235/469 (50%), Gaps = 6/469 (1%)
Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
+ RL I+D D A+ F +M S RPR F+ L V ++ +D
Sbjct: 41 RERLRSGIVDIK-----EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
+ K + ++Y+ I+I CC L+ AF + ++ ++G+ P+ V +++LI+G C
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
G + A L ++ E+G T T L+ GL NG D ++M G P+ TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
++ C G+ + +L +M R++ + V Y+ +I GLCK+ + A L ++M++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
G ++I Y LI GFC AG D +L + +P VV ++ LI F K G +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A +L +EM +RGI+P VTYT LID F + + ++KA M LM G P++ T+ +LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
G C + + +LF M + + V YN +I G+C+ G A L EM + + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
+I SY + LC +G+ +A + ++ K ++ + +YNI+ N
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 229/446 (51%), Gaps = 2/446 (0%)
Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDV 175
L+ R+S +AL +M++ G +P T N+L+ + + L + +
Sbjct: 154 LEGRVS-EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 176 YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRK 235
++G ++K C++G A E+L ++EE + V Y+ +IDG CK+G ++ A LF +
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 236 IGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
+ G A YT LI G G DG + M ++P + ++ LI + EGK
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
+ E +L EM R ++ + VTY +LI G CKE ++ +A +LD M G PN+ T+N
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
LI+G+C A D LF ++ G VTYN LI+ F + G ++A +L +EM R
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
+ P V+Y IL+D + + EKA E++ ++KS D+ Y ++IHG+C + +A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
LF S+ ++P+ YN+MI G CK+G+ A L +M E G PN +Y+ I
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVS 561
+G ++ L+ ++ + G S
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDAS 598
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 221/430 (51%), Gaps = 5/430 (1%)
Query: 117 LKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKS--CSFDKGWLFFSENRCKVELD 174
L ++SD A+ +M+++G +P T+ +L + KS + L E R K++LD
Sbjct: 189 LNGKVSD-AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLD 246
Query: 175 VYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFR 234
+ I+I G C+ G L+ AF + N++E GF +++IYT+LI G C G + L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 235 KIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEG 294
+ + + ++ LI K G ++ E +++M G+SP TY LI +C E
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
++ + + D M + N+ T+N LI G CK + + L +M + G+ + +TYN
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
LI GFC+ G+ + A LF ++ S P +V+Y +L+ G + A ++ ++E+
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
+ Y I+I + ++ A++++ + G PDV TY ++I GLC KG++ EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
LF M E PN YN++I + EG++ ++ +L+ E+ G + ++ + +
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Query: 535 LCQDGKWPEA 544
L DG+ ++
Sbjct: 607 L-SDGRLKKS 615
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 1/289 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
+ ++ID +K +A +M+ G+ P + T+ SL+ K DK
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K ++ +F ILI G C+A ++ E+ ++ G + V Y +LI G C+ G +E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
AK LF+++ + +Y +L+ GL NG + E +EK++ + + + YN +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H CN KV + + LF + + V +V TYN +I GLCK+ + EA+ L +M+ G S
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
PN TYN LI G+ K+ +L ++K G S T +++ S
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 56/158 (35%), Gaps = 35/158 (22%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y II + D A F + GV+P T+N
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN---------------------- 531
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
I+I G C+ G L++A + ++EE G SPN Y LI GD
Sbjct: 532 ------------IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGF 265
++ L +I G T +++ + +G K F
Sbjct: 580 KSAKLIEEIKRCGFSVDASTVKMVV-DMLSDGRLKKSF 616
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 213/388 (54%), Gaps = 3/388 (0%)
Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
E D+ +F LI G C + +A ++NQ+ EMG P+VV+YT++ID CKNG + A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
LF ++ G+ YT L+ GL +G +D M + P + T+N LI +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVI 351
EGK + +L++EM +A N+ TY +LI G C E V EA ++ M+ G P+V+
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 352 TYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
Y LI+GFC + D A ++F ++ G + + +TY LI+ F + G +A ++ M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 412 EERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK---SGFSPDVYTYGVLIHGLCMK 468
RG+ P+ TY +L+ + ++KA ++ MQK G +P+++TY VL+HGLC
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
G +++A +F M + +++ + Y ++I G CK G A+ L + KG+ PN+ +Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
++ I L ++G EA VL +M + G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 234/467 (50%), Gaps = 14/467 (2%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y I+ L S ++AL F M++S P F LL + K FD N
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD-----VVINL 94
Query: 169 CK------VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCK 222
C V D+Y+ +L+ C++ A L ++ ++GF P++V +TSLI+G C
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 223 NGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYT 282
+E A + ++ E+G+ YT +I L KNG +++M+ G+ P +
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
Y L++ CN G+ + L M R++ +V+T+N LI KE + +AE L ++M
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
I+PN+ TY LI+GFC G D+A ++F +++ G P VV Y LI F K
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
A + EM ++G+T + +TYT LI F + A E++S M G P++ TY VL+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 463 HGLCMKGNMKEASKLFNSMWETKLE---PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
H LC G +K+A +F M + +++ PN YN+++ G C G +AL + +M ++
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ I +Y+ I +C+ GK A L + G+KP+V Y +
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 4/349 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF-DKGWLFFSE 166
+Y +IID+ K+ + AL F QM + G+RP + SL+ + S + D L
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+ K++ DV +F LI + G A E+ N++ M +PN+ YTSLI+G C G +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
+ A+ +F + G YT LI G K D + + +M G++ + TY L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK---M 343
I + GK + ++F M R V N+ TYN L+ LC +V++A + + M+ M
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
G++PN+ TYN L+ G C G+ +KA +F ++ ++TY ++I+ KAG K
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
A +L + +G+ P+ VTYT +I R +A ++ M++ G S
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 345 GISPNVITYNKLID------GFCDAGET----------DKAFRLFNQLKSNGQSPSVVTY 388
G S +++++L+D FC+ E ++A LF + + PS++ +
Sbjct: 16 GNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDF 75
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
L+ +K + +L ++ G++ T +L++ F +S A M K
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
GF PD+ T+ LI+G C+ M+EA + N M E ++P+ V+Y +I CK G+
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
AL L +M G+ P++ Y+S + LC G+W +A+ LL M K +KP V +N L
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 569 A 569
A
Sbjct: 256 A 256
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 271/551 (49%), Gaps = 50/551 (9%)
Query: 21 AKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITS 80
++L P ++W + IS+ L L + S ++A + I + G + +
Sbjct: 77 SELDPDLCLRYYSWLVKN------SDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRN 130
Query: 81 SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
S + H + N S + + ++ A+ + + F + G +
Sbjct: 131 GSDHQVHSIFHAISM---CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187
Query: 141 SNTFNSLLIFVIK-SCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
+ + L+I ++K + S D +++ R K++ +V++F ++I C+ G +NKA +V+
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 200 QLEEMGFSPNVVIYTSLIDGCCK---NGDIERAKMLFRKIGELGLVATQHTYTVLICGLF 256
++ G SPNVV Y +LIDG CK NG + +A + +++ E
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE------------------ 289
Query: 257 KNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVV 316
N VSP+L T+N LI + + + K+F EM ++V NV+
Sbjct: 290 -----------------NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 317 TYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
+YN+LI GLC ++ EA + D+M AG+ PN+ITYN LI+GFC +A +F +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 377 KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDM 436
K G P+ YN+LI A+ K G L EME GI P TY LI R+ ++
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 437 EKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMM 496
E A +++ + G PD+ T+ +L+ G C KG ++A+ L M + L+P + YN++
Sbjct: 453 EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 497 IFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
+ GYCKEGN A + +M E+ L N+ASY+ + Q GK +A +LLN+ML+ G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 556 LKPSVSLYNIL 566
L P+ Y I+
Sbjct: 572 LVPNRITYEIV 582
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 189/366 (51%), Gaps = 6/366 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
+ +I+A K+ ++A M G P ++N+L+ K K + + +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 169 CKVELDV----YSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
VE DV +F ILI G + +L + +V ++ + PNV+ Y SLI+G C G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
I A + K+ G+ TY LI G KN + K+ + + ++ G P+ YN
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
LI YC GK+ +GF L +EM + +V TYN LI GLC+ ++ A++L DQ+
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
G+ P+++T++ L++G+C GE+ KA L ++ G P +TYN++++ + K GN K A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 405 SDLVREME-ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
+++ +ME ER + + +Y +L+ + + +E A + + M + G P+ TY ++
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 464 GLCMKG 469
+ +G
Sbjct: 585 EMVDQG 590
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 4/364 (1%)
Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
N +I L+ N E F++ G G + + L+ L K D Y
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK- 327
++M + P+++T+N +I+ C GK+++ + ++M+ + NVV+YNTLI G CK
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 328 --EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSV 385
++ +A+ +L +M +SPN+ T+N LIDGF + ++F ++ P+V
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
++YN LI G A + +M G+ P+ +TY LI+ F ++D +++A +M+
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 446 MQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
++ G P Y +LI C G + + L M + P+ YN +I G C+ GN
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
A +L ++ KGL P++ ++ + C+ G+ +A +LL +M K+GLKP YNI
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 566 LYRA 569
+ +
Sbjct: 511 VMKG 514
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 81 SSFTPRSLLCHLTQLFPS--SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVR 138
+ F +L +F S V +R+Y +IDA+ K D +M G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 139 PRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
P T+N L+ + ++ + + F + K D+ +F IL++G C G+ KA +L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 199 NQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI-GELGLVATQHTYTVLICGLFK 257
++ +MG P + Y ++ G CK G+++ A + ++ E L +Y VL+ G +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
G +D +M G+ P+ TY + E ++G V +
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 238/482 (49%), Gaps = 13/482 (2%)
Query: 89 LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
+C+ + F S S Y I+ L S D A+ F M+ S P FN LL
Sbjct: 39 MCYWGRAFSSGSGD------YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLL 92
Query: 149 IFVIKSCSFDKGWLFFS----ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
+ K FD L S R + ++Y++ ILI C ++ A +L ++ ++
Sbjct: 93 SAIAKMKKFD---LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
G+ P++V +SL++G C I A L ++ E+G T+T LI GLF + +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
++M G P+L TY +++ C G + F L ++M ++ NVV Y+T+I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
LCK +A L +M+ G+ PNVITY+ LI C+ A RL + + +P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
VVT+N LI AF K G A L EM +R I P TY+ LI+ F D +++A M+
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
LM P+V TY LI+G C + E +LF M + L N V Y +I G+ +
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
+ A + +M G+ PNI +Y++ + LC++GK +A V+ + + ++P++ YN
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 565 IL 566
I+
Sbjct: 510 IM 511
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 206/386 (53%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D +F LI G ++A +++++ + G PN+V Y +++G CK GDI+ A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
K+ + A Y+ +I L K + D + +M+ GV P++ TY+ LI CN
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
+ S+ +L +M R++ NVVT+N LI KE ++ EAE+L D+M I P++ TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
+ LI+GFC D+A +F + S P+VVTYN LI F KA +L REM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ + VTYT LI F ++ D + A ++ M G P++ TY L+ GLC G +++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A +F + +K+EP YN+MI G CK G L ++ KG+ P++ Y++ I
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPS 559
C+ G EA+ L +M + G P
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPD 574
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 221/407 (54%), Gaps = 4/407 (0%)
Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENRCKVELDVYS 177
R+SD A+ QM++ G RP + TF +L+ +F+ S + R + ++ +
Sbjct: 170 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVT 227
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
+G+++ G C+ GD++ AF +LN++E NVVIY+++ID CK + A LF ++
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
G+ TY+ LI L D M ++P++ T+N LI + EGK+
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
E KL+DEM R + ++ TY++LI G C R+ EA+ + + M PNV+TYN LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
+GFC A D+ LF ++ G + VTY LI F +A + A + ++M G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
P+ +TY L+D ++ +EKA ++ +Q+S P +YTY ++I G+C G +++ L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
F S+ ++P+ ++YN MI G+C++G A L +M E G +P+
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 159/319 (49%), Gaps = 7/319 (2%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
+Y ++ID+ K R D AL F +M + GVRP T++SL+ + C++ D L
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL---CNYERWSDASRLL 318
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ +V +F LI + G L +A ++ +++ + P++ Y+SLI+G C +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
++ AK +F + TY LI G K +G E + +M G+ + TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
LIH + +F +M V N++TYNTL+ GLCK ++++A + + ++
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ + P + TYN +I+G C AG+ + + LF L G P V+ YN +I F + G +
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 404 ASDLVREMEERGITPSEVT 422
A L R+M E G P T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 139/275 (50%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
K+ + LF M ++ +N L+ + K + L ++M+ GIS N+ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
LI+ FC + A L ++ G PS+VT + L+ + A LV +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P +T+T LI + +A + M + G P++ TYGV+++GLC +G++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
L N M K+E N V+Y+ +I CK + AL L EM KG+ PN+ +YSS I
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC +W +A LL+ M++ + P+V +N L A
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)
Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
R+SD A+ QM++ G RP + TF +L+ +F+ S + R C+ L
Sbjct: 170 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 226
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
++G+++ G C+ GD + A +LN++E +VVI+ ++ID CK ++ A LF+++
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
G+ TY+ LI L G D + M ++P+L T+N LI + EGK
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
E KL+D+M R + ++ TYN+L+ G C R+ +A+++ + M P+V+TYN L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I GFC + + LF ++ G VTY LI+ G+ A + ++M G+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
P +TY+IL+D + +EKA E++ MQKS D+Y Y +I G+C G + +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
LF S+ ++PN V YN MI G C + A LL +M E G +PN +Y++ I
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 537 QDGKWPEAEVLLNQM 551
+DG + L+ +M
Sbjct: 587 RDGDKAASAELIREM 601
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 211/396 (53%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D +F LI G ++A +++++ + G PN+V Y +++G CK GD + A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
K+ + A + +I L K D +++M+ G+ P++ TY+ LI C+
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G+ S+ +L +M +++ N+VT+N LI KE + EAE+L D M I P++ TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N L++GFC DKA ++F + S P VVTYN LI+ F K+ + ++L REM
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ VTYT LI D + A +++ M G PD+ TY +L+ GLC G +++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++F+ M +++++ + +Y MI G CK G L ++ KG+ PN+ +Y++ I
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC EA LL +M + G P+ YN L RA
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 9/480 (1%)
Query: 89 LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL 148
+C+ + F S S Y I+ L D A+ F M+ S P FN LL
Sbjct: 39 MCYWGRAFSSGSGD------YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLL 92
Query: 149 IFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF 206
+ K FD + E ++E+ +Y++ ILI C ++ A +L ++ ++G+
Sbjct: 93 SAIAKMKKFDV-VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 207 SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFE 266
P++V +SL++G C I A L ++ E+G T+T LI GLF + +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
++M G P+L TY +++ C G L ++M ++ +VV +NT+I LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
K V +A L +M+ GI PNV+TY+ LI C G A +L + + +P++V
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
T+N LI AF K G A L +M +R I P TY L++ F D ++KA +M+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
PDV TY LI G C +++ ++LF M L + V Y +I G +G+
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A ++ +M G+ P+I +YS + LC +GK +A + + M K +K + +Y +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 7/362 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
++ +IID+ K R D AL F +M G+RP T++SL+ + CS+ D L
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 318
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ ++ +F LI + G +A ++ + + + P++ Y SL++G C +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
+++AK +F + TY LI G K+ +DG E + +M G+ TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
LI ++G K+F +M V +++TY+ L+ GLC ++++A + D M+
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ I ++ Y +I+G C AG+ D + LF L G P+VVTYN +I +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A L+++M+E G P+ TY LI + +R D + E+ M+ F D T G++ +
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 464 GL 465
L
Sbjct: 619 ML 620
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%)
Query: 283 YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMK 342
Y ++ ++ K+ + LF M ++V +N L+ + K + L ++M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 343 MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402
I + TYN LI+ FC + A L ++ G PS+VT + L+ +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 403 MASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLI 462
A LV +M E G P +T+T LI + +A + M + G P++ TYGV++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 463 HGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
+GLC +G+ A L N M K+E + V++N +I CK + AL L EM KG+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 523 PNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
PN+ +YSS I LC G+W +A LL+ M++ + P++ +N L A
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
Y ++D + ++AL F M S ++ + +++ + K+ D GW LF S +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
V+ +V ++ +I G C L +A+ +L +++E G PN Y +LI ++GD
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
+ L R++ V T L+ + +G
Sbjct: 593 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 623
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 285/551 (51%), Gaps = 17/551 (3%)
Query: 25 PLKAFSLFNWASRQGLQHTPQSISI-ILRLLLSKMSSHSHAAAQTLILKIISGRITSSSF 83
P S F WA + P + ++ ++ S +S H A A++L++ I R + +S
Sbjct: 55 PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYI--RTSDASL 112
Query: 84 TPRSLLCHLTQLFPSSS-NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
+ LC+ + L P+ +P L++ + A+L AL F +M+ ++P
Sbjct: 113 S----LCN-SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLL 167
Query: 143 TFNSLLIFVIK---SCSFDKGWLFFSEN-RCKVELDVYSFGILIKGCCEAGDLNKAFEVL 198
T N+LLI +++ S S F + + V L+V +F +L+ G C G L A +L
Sbjct: 168 TCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227
Query: 199 NQL-EEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFK 257
++ E +P+ V Y +++ K G + K L + + GLV + TY L+ G K
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287
Query: 258 NGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVT 317
G K+ F+ E M+ V P L TYN LI+ CN G + EG +L D M+ ++ +VVT
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347
Query: 318 YNTLICGLCKEMRVQ-EAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL 376
YNTLI G C E+ + EA +L++QM+ G+ N +T+N + C + + R +L
Sbjct: 348 YNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 377 KS-NGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDD 435
+G SP +VTY+ LI+A+ K G+ A +++REM ++GI + +T ++D+ +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
+++A + + K GF D TYG LI G + +++A ++++ M + K+ P +N
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
+I G C G + A+ E+ E GL+P+ ++++S I C++G+ +A N+ +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 556 LKPSVSLYNIL 566
KP NIL
Sbjct: 587 FKPDNYTCNIL 597
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 236/445 (53%), Gaps = 5/445 (1%)
Query: 109 YESIIDA-HLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS-E 166
Y +I+ A K RLSD M +G+ P T+N+L+ K S + +
Sbjct: 243 YNTILKAMSKKGRLSDLKELLL-DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+ V D+ ++ ILI G C AG + + E+++ ++ + P+VV Y +LIDGC + G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD-GFEFYEKMQLNGVSPSLYTYNC 285
A+ L ++ G+ A Q T+ + + L K ++ + E + ++G SP + TY+
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
LI Y G +S ++ EM + + N +T NT++ LCKE ++ EA LL+ G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
+ +TY LI GF + +KA +++++K +P+V T+N LI G +++A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
+ E+ E G+ P + T+ +I + + +EKAFE Y+ K F PD YT +L++GL
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
C +G ++A FN++ E + E + V YN MI +CK+ A LL EM EKGL P+
Sbjct: 602 CKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQ 550
+Y+S I +L +DGK E + LL +
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKK 685
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 32/400 (8%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++ID + LS +A QM + GV+ T N L ++ C +K + +
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL---CKEEKREAVTRKVK 404
Query: 169 CKVEL-----DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
V++ D+ ++ LIK + GDL+ A E++ ++ + G N + +++D CK
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
++ A L + G + + TY LI G F+ + E +++M+ ++P++ T+
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
N LI C+ GK + FDE+ + + T+N++I G CKE RV++A ++
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
P+ T N L++G C G T+KA FN L + VTYN +I AF K K
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKE 643
Query: 404 ASDLVREMEERGITPSEVTYTILID------SFVRSDDMEKAFE-----MYSLMQ----- 447
A DL+ EMEE+G+ P TY I +D++ K F M +Q
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEK 703
Query: 448 -------KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
K + + Y +I LC +G +KE S+ + S
Sbjct: 704 NPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 165/332 (49%), Gaps = 40/332 (12%)
Query: 278 PSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---EMRVQEA 334
PS ++ + Y +EGK ++F +M ++ N++T NTL+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ-SPSVVTYNVLIR 393
+ D M G+S NV T+N L++G+C G+ + A + ++ S + +P VTYN +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
A SK G +L+ +M++ G+ P+ VTY L+ + + +++AF++ LM+++ P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
D+ TY +LI+GLC G+M+E +L ++M KL+P+ V YN +I G + G S A +L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 514 GEMNEKGL------------------------------------VPNIASYSSTIGVLCQ 537
+M G+ P+I +Y + I +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
G A ++ +M + G+K + N + A
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 202/391 (51%), Gaps = 3/391 (0%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D+ LI+G C G KA ++L LE G P+V+ Y +I G CK G+I A +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
+ + + TY ++ L +G K E ++M P + TY LI C +
Sbjct: 196 DR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
V KL DEMR R +VVTYN L+ G+CKE R+ EA + L+ M +G PNVIT+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N ++ C G A +L + G SPSVVT+N+LI + G A D++ +M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
G P+ ++Y L+ F + M++A E M G PD+ TY ++ LC G +++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++ N + P + YN +I G K G + +A++LL EM K L P+ +YSS +G
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
L ++GK EA ++ ++G++P+ +N
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Score = 225 bits (573), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 216/422 (51%), Gaps = 2/422 (0%)
Query: 135 SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
SG P T+N ++ K+ + +R V DV ++ +++ C++G L +A
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVL--DRMSVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
EVL+++ + P+V+ YT LI+ C++ + A L ++ + G TY VL+ G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
+ K G + +F M +G P++ T+N ++ C+ G+ + KL +M + + +
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
VVT+N LI LC++ + A +L++M G PN ++YN L+ GFC + D+A
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
++ S G P +VTYN ++ A K G + A +++ ++ +G +P +TY +ID ++
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
KA ++ M+ PD TY L+ GL +G + EA K F+ + PN V +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
++ G CK + RA+ L M +G PN SY+ I L +G EA LLN++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 555 GL 556
GL
Sbjct: 584 GL 585
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 200/379 (52%), Gaps = 3/379 (0%)
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
G+L + F+ L + G P+++ T+LI G C+ G +A + + G V T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
Y V+I G K G + ++M VSP + TYN ++ C+ GK+ + ++ D M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
R+ +V+TY LI C++ V A +LLD+M+ G +P+V+TYN L++G C G D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
+A + N + S+G P+V+T+N+++R+ G A L+ +M +G +PS VT+ ILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
+ R + +A ++ M + G P+ +Y L+HG C + M A + M
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
P+ V YN M+ CK+G A+ +L +++ KG P + +Y++ I L + GK +A L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 548 LNQMLKLGLKPSVSLYNIL 566
L++M LKP Y+ L
Sbjct: 472 LDEMRAKDLKPDTITYSSL 490
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 203/393 (51%), Gaps = 3/393 (0%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
DV ++ ++I G C+AG++N A VL++ M SP+VV Y +++ C +G +++A +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
++ + TYT+LI ++ + ++M+ G +P + TYN L++ C E
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G++ E K ++M NV+T+N ++ +C R +AE+LL M G SP+V+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N LI+ C G +A + ++ +G P+ ++YN L+ F K A + + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG P VTY ++ + + +E A E+ + + G SP + TY +I GL G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A KL + M L+P+ + Y+ ++ G +EG A++ E G+ PN +++S +
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
LC+ + A L M+ G KP+ + Y IL
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 200/417 (47%), Gaps = 8/417 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS--- 165
Y +I + K+ + AL +M V P T+N++L + S +
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
+ C DV ++ ILI+ C + A ++L+++ + G +P+VV Y L++G CK G
Sbjct: 232 QRDCYP--DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
++ A + G T+ +++ + G D + M G SPS+ T+N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
LI+ C +G + + ++M N ++YN L+ G CKE ++ A L++M G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
P+++TYN ++ C G+ + A + NQL S G SP ++TYN +I +KAG + A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
L+ EM + + P +TY+ L+ R +++A + + ++ G P+ T+ ++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLV 522
C A M +PN+ Y ++I G EG + AL LL E+ KGL+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 38/347 (10%)
Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
+ + G ++GF+F E M +G P + LI +C GK + K+ + + +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
V+TYN +I G CK + A +LD+M +SP+V+TYN ++ CD+G+ +A + +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
++ P V+TY +LI A + A L+ EM +RG TP VTY +L++ +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 435 DMEKAF-----------------------------------EMYSLMQKSGFSPDVYTYG 459
+++A ++ + M + GFSP V T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
+LI+ LC KG + A + M + +PN + YN ++ G+CKE RA+ L M +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
G P+I +Y++ + LC+DGK +A +LNQ+ G P + YN +
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 158/280 (56%), Gaps = 3/280 (1%)
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
+ + G++ EGFK + M + +++ TLI G C+ + ++A ++L+ ++ +G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
P+VITYN +I G+C AGE + A + +++ SP VVTYN ++R+ +G K A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
++ M +R P +TYTILI++ R + A ++ M+ G +PDV TY VL++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
+G + EA K N M + +PN + +N+++ C G A +LL +M KG P++
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+++ I LC+ G A +L +M + G +P+ YN L
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 386 VTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSL 445
V N +R + G + + M G P + T LI F R KA ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 446 MQKSGFSPDVYTYGVLIHG--------------------------------LCMKGNMKE 473
++ SG PDV TY V+I G LC G +K+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++ + M + P+ + Y ++I C++ A++LL EM ++G P++ +Y+ +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+C++G+ EA LN M G +P+V +NI+ R+
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 92 LTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFV 151
L QL +PV + Y ++ID K+ + +A+ +M ++P + T++SL+ +
Sbjct: 437 LNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 152 IKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV 210
+ D+ FF E R + + +F ++ G C++ ++A + L + G PN
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 211 VIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
YT LI+G G + A L ++ GL+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 237/459 (51%), Gaps = 1/459 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y +I LKSR +A+ + +M+ G RP T++SL++ + K D E
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
++ +VY+F I I+ AG +N+A+E+L ++++ G P+VV YT LID C ++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
AK +F K+ + TY L+ N +F+ +M+ +G P + T+ L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C G E F D MR + + N+ TYNTLICGL + R+ +A L M+ G+
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P TY ID + +G++ A F ++K+ G +P++V N + + +KAG + A +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+++ G+ P VTY +++ + + ++++A ++ S M ++G PDV LI+ L
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
+ EA K+F M E KL+P V YN ++ G K G A+ L M +KG PN +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+++ LC++ + A +L +M+ +G P V YN +
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 234/505 (46%), Gaps = 43/505 (8%)
Query: 103 VTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW- 161
V S Y ++ + K D+A+ +M+++G P NSL+ + K+ D+ W
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 162 LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCC 221
+F K++ V ++ L+ G + G + +A E+ + + G PN + + +L D C
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 222 KNGDIERA-KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
KN ++ A KMLF K+ ++G V TY +I GL KNG K+ F+ +M+ V P
Sbjct: 620 KNDEVTLALKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677
Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHR-------------------EVAC-NVVTYN- 319
T L+ + + +K+ + E N V+++
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 320 ----------------TLICGLCKEMRVQEAERLLDQM-KMAGISPNVITYNKLIDGFCD 362
+I CK V A L ++ K G+ P + TYN LI G +
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
A + A +F Q+KS G P V TYN L+ A+ K+G +L +EM + +T
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 423 YTILIDSFVRSDDMEKAFEM-YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
+ I+I V++ +++ A ++ Y LM FSP TYG LI GL G + EA +LF M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
+ PN +YN++I G+ K G + A L M ++G+ P++ +YS + LC G+
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
E ++ + GL P V YN++
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLI 1002
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 196/394 (49%)
Query: 173 LDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKML 232
L+ YS+ LI ++ +A EV ++ GF P++ Y+SL+ G K DI+ L
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 233 FRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCN 292
+++ LGL +T+T+ I L + G + +E ++M G P + TY LI C
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 293 EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
K+ ++F++M+ + VTY TL+ + ++ +M+ G P+V+T
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
+ L+D C AG +AF + ++ G P++ TYN LI + A +L ME
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
G+ P+ TY + ID + +S D A E + M+ G +P++ ++ L G +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
EA ++F + + L P+ V YNMM+ Y K G A++LL EM E G P++ +S I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
L + + EA + +M ++ LKP+V YN L
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 225/498 (45%), Gaps = 40/498 (8%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
+ ++ D K+ AL +M+D G P T+N+++ ++K+ + FF + +
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQ---------------------LEEMGFS 207
V D + L+ G +A + A++++ L E G
Sbjct: 671 KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGID 730
Query: 208 PNVVIYTSLI-DGCCKNGD---------------IERAKMLFRKIG-ELGLVATQHTYTV 250
V L+ +G C++GD + A+ LF K +LG+ TY +
Sbjct: 731 NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
LI GL + + + + + +++ G P + TYN L+ Y GK+ E F+L+ EM E
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 311 VACNVVTYNTLICGLCKEMRVQEAERL-LDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
N +T+N +I GL K V +A L D M SP TY LIDG +G +A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
+LF + G P+ YN+LI F KAG + A L + M + G+ P TY++L+D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK-LEP 488
+++ + +++SG +PDV Y ++I+GL ++EA LFN M ++ + P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
+ YN +I G A ++ E+ GL PN+ ++++ I GK A +
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Query: 549 NQMLKLGLKPSVSLYNIL 566
M+ G P+ Y L
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 189/391 (48%), Gaps = 10/391 (2%)
Query: 193 KAFEVLNQLEEMGFSPNVV----------IYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
+A V +LEEM + +++ Y ++ G +++A RK+ E G V
Sbjct: 126 EALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV 185
Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
++Y LI L K+ + E Y +M L G PSL TY+ L+ + L
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
EM + NV T+ I L + ++ EA +L +M G P+V+TY LID C
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
A + D A +F ++K+ P VTY L+ FS + EME+ G P VT
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
+TIL+D+ ++ + +AF+ +M+ G P+++TY LI GL + +A +LF +M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
++P Y + I Y K G+S AL +M KG+ PNI + ++++ L + G+
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
EA+ + + +GL P YN++ + + +
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 231/534 (43%), Gaps = 73/534 (13%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +IDA +R D A F +M +P T+ +LL + D F+SE
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ DV +F IL+ C+AG+ +AF+ L+ + + G PN+ Y +LI G + ++
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A LF + LG+ T +TY V I K+G E +EKM+ G++P++ N +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ G+ E ++F ++ + + VTYN ++ K + EA +LL +M G
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P+VI N LI+ A D+A+++F ++K P+VVTYN L+ K G + A +L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY--------- 458
M ++G P+ +T+ L D ++D++ A +M M G PDV+TY
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 459 -GVLIHGLCMKGNMK------------------------EASKLF-NSMWETKLEPNDVV 492
G + +C MK +A K+ N ++ +P ++
Sbjct: 656 NGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 493 YNMMIF---------------------GYCKEG--------------NSYRALRLLGEMN 517
+ +I G C++G N+ R L E
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 518 EK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
K G+ P + +Y+ IG L + A+ + Q+ G P V+ YN L A
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 153/327 (46%)
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
G L LV T T ++ L +G ++ ++ MQ + TY + +G +
Sbjct: 110 GNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGL 169
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
+ +MR N +YN LI L K EA + +M + G P++ TY+ L
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
+ G + D L ++++ G P+V T+ + IR +AG A ++++ M++ G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
P VTYT+LID+ + ++ A E++ M+ PD TY L+ ++ +
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
++ M + P+ V + +++ CK GN A L M ++G++PN+ +Y++ I L
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 537 QDGKWPEAEVLLNQMLKLGLKPSVSLY 563
+ + +A L M LG+KP+ Y
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTY 436
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 286 LIH--EYCN--------EGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAE 335
L+H E CN +GK+ E +FD M+ R + + TY T+ L + +++A
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173
Query: 336 RLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
L +M+ G N +YN LI + +A ++ ++ G PS+ TY+ L+
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233
Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
K + L++EME G+ P+ T+TI I R+ + +A+E+ M G PDV
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGE 515
TY VLI LC + A ++F M + +P+ V Y ++ + + + E
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 516 MNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
M + G VP++ +++ + LC+ G + EA L+ M G+ P++ YN L
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y +I+ K+ +D A F +M+ GVRP
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRP---------------------------- 959
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
D+ ++ +L+ C G +++ +L+E G +P+VV Y +I+G K+ +E
Sbjct: 960 ------DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 228 RAKMLFRKI-GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
A +LF ++ G+ +TY LI L G+ ++ + Y ++Q G+ P+++T+N L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTL 321
I Y GK + ++ M + N TY L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 107 RLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE 166
+ Y ++D D+ L YF ++ +SG+ P +N ++ + KS ++ + F+E
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 167 NRCK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
+ + D+Y++ LI AG + +A ++ N+++ G PNV + +LI G +G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVL 251
E A +++ + G TY L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 237/456 (51%), Gaps = 2/456 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-N 167
Y +++++ + L D+ + +ML+ V P T+N ++ K + ++ + S+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
++ D +++ LI G C+ DL+ AF+V N++ G N V YT LI G C I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A LF K+ + T TYTVLI L + + + ++M+ G+ P+++TY LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C++ K + +L +M + + NV+TYN LI G CK +++A +++ M+ +S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PN TYN+LI G+C + KA + N++ P VVTYN LI ++GN A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+ M +RG+ P + TYT +IDS +S +E+A +++ +++ G +P+V Y LI G C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
G + EA + M PN + +N +I G C +G A L +M + GL P +++
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
+ I L +DG + A QML G KP Y
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 208/431 (48%), Gaps = 34/431 (7%)
Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
K +L + + L+ G +++ +V ++ E PN+ Y +++G CK G++E A
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
KI E GL TYT LI G + F+ + +M L G + Y LIH
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
C ++ E LF +M+ E V TY LI LC R EA L+ +M+ GI PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
+ TY LID C + +KA L Q+ G P+V+TYN LI + K G + A D+V
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 410 EME----------------------------------ERGITPSEVTYTILIDSFVRSDD 435
ME ER + P VTY LID RS +
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 436 MEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNM 495
+ A+ + SLM G PD +TY +I LC ++EA LF+S+ + + PN V+Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 496 MIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG 555
+I GYCK G A +L +M K +PN ++++ I LC DGK EA +L +M+K+G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 556 LKPSVSLYNIL 566
L+P+VS IL
Sbjct: 598 LQPTVSTDTIL 608
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 235/479 (49%), Gaps = 23/479 (4%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW--LFFSE 166
Y +ID+ ++A QML+ G+ P T+N+L+ K + + E
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+R K+ + ++ LIKG C++ +++KA VLN++ E P+VV Y SLIDG C++G+
Sbjct: 421 SR-KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
+ A L + + GLV Q TYT +I L K+ ++ + ++ ++ GV+P++ Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I YC GKV E + ++M + N +T+N LI GLC + +++EA L ++M G+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
P V T LI G+ D A+ F Q+ S+G P TY I+ + + G A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG-- 464
++ +M E G++P TY+ LI + AF++ M+ +G P +T+ LI
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 465 -------------LCMKGNMKE---ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
LC NM E +L M E + PN Y +I G C+ GN
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 509 ALRLLGEMNE-KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A ++ M +G+ P+ +++ + C+ K EA +++ M+ +G P + +L
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 196/421 (46%), Gaps = 64/421 (15%)
Query: 180 ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGEL 239
++IK C GD A VL+ +M + LI GC
Sbjct: 148 LMIKSCDSVGD---ALYVLDLCRKMNKDERFELKYKLIIGC------------------- 185
Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
Y L+ L + GL + + Y +M + V P++YTYN +++ YC G V E
Sbjct: 186 --------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
+ ++ + + TY +LI G C+ + A ++ ++M + G N + Y LI G
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
C A D+A LF ++K + P+V TY VLI++ + A +LV+EMEE GI P+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG---------- 469
TYT+LIDS EKA E+ M + G P+V TY LI+G C +G
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 470 ------------------------NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGN 505
N+ +A + N M E K+ P+ V YN +I G C+ GN
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 506 SYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNI 565
A RLL MN++GLVP+ +Y+S I LC+ + EA L + + + G+ P+V +Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 566 L 566
L
Sbjct: 538 L 538
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 217/482 (45%), Gaps = 56/482 (11%)
Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
+R Y +I + KS + +A+ ++ML+ V P T+NSL+ +S +FD + S
Sbjct: 428 TRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 166 -ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
N + D +++ +I C++ + +A ++ + LE+ G +PNVV+YT+LIDG CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
++ A ++ K+ + T+ LI GL +G K+ EKM G+ P++ T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
LIH +G + F +M + TY T I C+E R+ +AE ++ +M+
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 345 GISPNVITYNKLIDGFCDAGETDKAF---------------------------------- 370
G+SP++ TY+ LI G+ D G+T+ AF
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 371 -------------------RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM 411
L ++ + +P+ +Y LI + GN ++A + M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 412 EE-RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
+ GI+PSE+ + L+ + +A ++ M G P + + VLI GL KG
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
+ + +F ++ + +++ + ++I G K+G L M + G + +YS
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 531 TI 532
I
Sbjct: 907 LI 908
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 178/411 (43%), Gaps = 55/411 (13%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y S+ID+ KS+ ++A F + GV P + +L+ K+ D+ L +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 169 CKVEL-DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K L + +F LI G C G L +A + ++ ++G P V T LI K+GD +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A F+++ G HTYT I + G D + KM+ NGVSP L+TY+ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI------------------CGLCKEM 329
Y + G+ + F + MR + T+ +LI C + M
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 330 RVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN-GQSPSVVTY 388
LL++M ++PN +Y KLI G C+ G A ++F+ ++ N G SPS + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 389 NVLIRAFSKAGNSKMASDLVREM------------------------EERGIT------- 417
N L+ K A+ +V +M +ERG +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 418 ----PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
E+ + I+ID + +E +E++++M+K+G TY +LI G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 209/396 (52%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
DV S+ ++ G C G+L+K ++++ ++ G PN IY S+I C+ + A+ F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
++ G++ YT LI G K G + +F+ +M ++P + TY +I +C
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G + E KLF EM + + + VT+ LI G CK +++A R+ + M AG SPNV+TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
LIDG C G+ D A L +++ G P++ TYN ++ K+GN + A LV E E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
G+ VTYT L+D++ +S +M+KA E+ M G P + T+ VL++G C+ G +++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
KL N M + PN +N ++ YC N A + +M +G+ P+ +Y + +
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
C+ EA L +M G SVS Y++L +
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 1/436 (0%)
Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194
G P ++++++ + DK W L R ++ + Y +G +I C L +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254
E +++ G P+ V+YT+LIDG CK GDI A F ++ + TYT +I G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 255 LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314
+ G + + + +M G+ P T+ LI+ YC G + + F++ + M + N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
VVTY TLI GLCKE + A LL +M G+ PN+ TYN +++G C +G ++A +L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
+ ++ G + VTY L+ A+ K+G A ++++EM +G+ P+ VT+ +L++ F
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
+E ++ + M G +P+ T+ L+ C++ N+K A+ ++ M + P+ Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
++ G+CK N A L EM KG ++++YS I + K+ EA + +QM +
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 555 GLKPSVSLYNILYRAK 570
GL +++ K
Sbjct: 696 GLAADKEIFDFFSDTK 711
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 216/397 (54%), Gaps = 7/397 (1%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNV----VIYTSLIDGCCKNGDIERA 229
D F + + + G L +A V ++ G +V V T L C K A
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA---TA 230
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
++FR+ E+G+ +Y ++I + + G K+ M+L G +P + +Y+ +++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
YC G++ + +KL + M+ + + N Y ++I LC+ ++ EAE +M GI P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
+ Y LIDGFC G+ A + F ++ S +P V+TY +I F + G+ A L
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 410 EMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKG 469
EM +G+ P VT+T LI+ + ++ M+ AF +++ M ++G SP+V TY LI GLC +G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 470 NMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYS 529
++ A++L + MW+ L+PN YN ++ G CK GN A++L+GE GL + +Y+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 530 STIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ + C+ G+ +A+ +L +ML GL+P++ +N+L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
+ M GV P T+ +L+ K+ + + W F E + K + V ++ +LIKG +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
+A EV +Q+ G + + I+ D
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 286/572 (50%), Gaps = 22/572 (3%)
Query: 9 GQALTLNLIS----RMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHA 64
LT +L+S + K P L AF+ N L Q ++I + +SK+SS
Sbjct: 66 ADKLTPSLVSTTLLSLVKTPNL-AFNFVNHIDLYRLDFQTQCLAIAV---ISKLSS---P 118
Query: 65 AAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSR-LYESIIDAHLKSRLSD 123
T +LK + +TS + R+L +L + TKS L++ ++ + R+ D
Sbjct: 119 KPVTQLLKEV---VTSRKNSIRNLF---DELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172
Query: 124 QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILI 182
+A+ F+ M + G P++ T N +L + + + W+F+++ R +++ +VY+F I+I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
C+ G L KA L +E G P +V Y +L+ G G IE A+++ ++ G
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 243 ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKL 302
TY ++ + G E +M+ G+ P +YN LI N G + F
Sbjct: 293 PDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCD 362
DEM + + TYNTLI GL E +++ AE L+ +++ GI + +TYN LI+G+C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 363 AGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVT 422
G+ KAF L +++ ++G P+ TY LI + ++ A +L ++ +G+ P V
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
L+D +M++AF + M +PD TY L+ GLC +G +EA +L M
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
++P+ + YN +I GY K+G++ A + EM G P + +Y++ + L ++ +
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589
Query: 543 EAEVLLNQMLKLGLKPSVSLYNILYRAKNNIE 574
AE LL +M G+ P+ S + + A +N++
Sbjct: 590 LAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 1/284 (0%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
+ A Y +M+ G+ P T+N+L+ + + + E R K + LD ++ IL
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I G C+ GD KAF + +++ G P YTSLI C+ A LF K+ G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
L+ G G F ++M + ++P TYNCL+ C EGK E +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
L EM+ R + + ++YNTLI G K+ + A + D+M G +P ++TYN L+ G
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
E + A L ++KS G P+ ++ +I A S K S
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSDS 627
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)
Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR-CKVELDVY 176
R+SD A+ QM++ G RP + TF +L+ +F+ S + R C+ L
Sbjct: 95 RISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--V 151
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
++G+++ G C+ GD++ AF +LN++E +VVI+ ++ID CK ++ A LF+++
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
G+ TY+ LI L G D + M ++P+L T+N LI + EGK
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
E KL D+M R + ++ TYN+LI G C R+ +A+++ + M P++ TYN L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I GFC + + LF ++ G VTY LI+ G+ A + ++M G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
P +TY+IL+D + +EKA E++ MQKS D+Y Y +I G+C G + +
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
LF S+ ++PN V YN MI G C + A LL +M E G +P+ +Y++ I
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 537 QDGKWPEAEVLLNQM 551
+DG + L+ +M
Sbjct: 512 RDGDKAASAELIREM 526
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 210/396 (53%)
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D +F LI G ++A +++++ + G PN+V Y +++G CK GDI+ A L
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
K+ + A + +I L K D +++M+ G+ P++ TY+ LI C+
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G+ S+ +L +M +++ N+VT+N LI KE + EAE+L D M I P++ TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N LI+GFC DKA ++F + S P + TYN LI+ F K+ + ++L REM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ VTYT LI D + A +++ M G PD+ TY +L+ GLC G +++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A ++F+ M +++++ + +Y MI G CK G L ++ KG+ PN+ +Y++ I
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC EA LL +M + G P YN L RA
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 218/439 (49%), Gaps = 7/439 (1%)
Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS----ENRCKVELDVYSFGILIKGCCE 187
M+ S P FN LL + K FD L S R + ++Y++ ILI C
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFD---LVISLGEKMQRLGISHNLYTYNILINCFCR 57
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
++ A +L ++ ++G+ P++V +SL++G C I A L ++ E+G T
Sbjct: 58 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
+T LI GLF + + ++M G P+L TY +++ C G + F L ++M
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
++ +VV +NT+I LCK V +A L +M+ GI PNV+TY+ LI C G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
A +L + + +P++VT+N LI AF K G A L +M +R I P TY LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
+ F D ++KA +M+ M PD+ TY LI G C +++ ++LF M L
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
+ V Y +I G +G+ A ++ +M G+ P+I +YS + LC +GK +A +
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 548 LNQMLKLGLKPSVSLYNIL 566
+ M K +K + +Y +
Sbjct: 418 FDYMQKSEIKLDIYIYTTM 436
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 157/301 (52%)
Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
EKMQ G+S +LYTYN LI+ +C ++S L +M ++VT ++L+ G C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
R+ +A L+DQM G P+ IT+ LI G + +A L +++ G P++VTY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
V++ K G+ +A +L+ +ME I V + +IDS + ++ A ++ M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
G P+V TY LI LC G +AS+L + M E K+ PN V +N +I + KEG
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
A +L +M ++ + P+I +Y+S I C + +A+ + M+ P + YN L +
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 569 A 569
Sbjct: 334 G 334
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 7/362 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF----DKGWLF 163
++ +IID+ K R D AL F +M G+RP T++SL+ + CS+ D L
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL---CSYGRWSDASQLL 243
Query: 164 FSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
K+ ++ +F LI + G +A ++ + + + P++ Y SLI+G C +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
+++AK +F + TY LI G K+ +DG E + +M G+ TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 284 NCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKM 343
LI ++G K+F +M V +++TY+ L+ GLC ++++A + D M+
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 344 AGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKM 403
+ I ++ Y +I+G C AG+ D + LF L G P+VVTYN +I +
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A L+++M+E G P TY LI + +R D + E+ M+ F D T G++ +
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Query: 464 GL 465
L
Sbjct: 544 ML 545
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 134/256 (52%)
Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
++ +N L+ + K + L ++M+ GIS N+ TYN LI+ FC + A L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRS 433
++ G PS+VT + L+ + A LV +M E G P +T+T LI
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 434 DDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVY 493
+ +A + M + G P++ TYGV+++GLC +G++ A L N M K+E + V++
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 494 NMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLK 553
N +I CK + AL L EM KG+ PN+ +YSS I LC G+W +A LL+ M++
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 554 LGLKPSVSLYNILYRA 569
+ P++ +N L A
Sbjct: 249 KKINPNLVTFNALIDA 264
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
Y ++D + ++AL F M S ++ + +++ + K+ D GW LF S +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
V+ +V ++ +I G C L +A+ +L +++E G P+ Y +LI ++GD
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
+ L R++ V T L+ + +G
Sbjct: 518 ASAELIREMRSCRFVGDASTIG-LVANMLHDG 548
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 216/438 (49%), Gaps = 2/438 (0%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGIL 181
++A+ M + G+ P S T N +L ++ + F E + V D S+ ++
Sbjct: 164 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 223
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
+ GC G + +A L + + GF P+ T ++ C+NG + RA FRK+ +LG
Sbjct: 224 VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 283
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
+T LI GL K G K FE E+M NG P++YT+ LI C G + F+
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343
Query: 302 LFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
LF ++ R NV TY ++I G CKE ++ AE L +MK G+ PNV TY LI+G
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403
Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
C AG +A+ L N + G P++ TYN I + K + A +L+ + G+
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463
Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
VTYTILI + +D+ +A + M K+GF D+ +LI C + MKE+ +LF
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
+ L P Y MI YCKEG+ AL+ M G VP+ +Y S I LC+
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 541 WPEAEVLLNQMLKLGLKP 558
EA L M+ GL P
Sbjct: 584 VDEACKLYEAMIDRGLSP 601
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 38/443 (8%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKV 171
I+ A ++ L ++A++YF +M+D G +P
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKP-------------------------------- 285
Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
++ +F LI G C+ G + +AFE+L ++ G+ PNV +T+LIDG CK G E+A
Sbjct: 286 --NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343
Query: 232 LFRKIGELGLVATQ-HTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
LF K+ HTYT +I G K + +M+ G+ P++ TY LI+ +
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403
Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
C G ++L + M N+ TYN I LCK+ R EA LL++ G+ +
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463
Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
+TY LI C + ++A F ++ G + N+LI AF + K + L +
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
+ G+ P++ TYT +I + + D++ A + + M++ G PD +TYG LI GLC K
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
+ EA KL+ +M + L P +V + + YCK +S A+ LL +++K + + +
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTV---RT 640
Query: 531 TIGVLCQDGKWPEAEVLLNQMLK 553
+ LC + K A + ++L+
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLE 663
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 1/384 (0%)
Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
+++ E G LN+A ++ ++ G +P+ + +++ + G IE A+ +F ++ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
+V +Y +++ G F++G ++ + M G P T ++ C G V+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
F +M N++ + +LI GLCK+ +++A +L++M G PNV T+ LIDG
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 361 CDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
C G T+KAFRLF +L +S+ P+V TY +I + K A L M+E+G+ P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
TYT LI+ ++ +A+E+ +LM GF P++YTY I LC K EA +L N
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDG 539
+ LE + V Y ++I CK+ + +AL MN+ G ++ + I C+
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 540 KWPEAEVLLNQMLKLGLKPSVSLY 563
K E+E L ++ LGL P+ Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETY 536
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 36/335 (10%)
Query: 271 MQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMR 330
MQ G++PS T NC++ G + +FDEM R V + +Y ++ G ++ +
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 331 VQEAERLLDQM---------------------------------KMA--GISPNVITYNK 355
+QEA+R L M KM G PN+I +
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL-VREMEER 414
LIDG C G +AF + ++ NG P+V T+ LI K G ++ A L ++ +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
P+ TYT +I + + D + +A ++S M++ G P+V TY LI+G C G+ A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
+L N M + PN YN I CK+ + A LL + GL + +Y+ I
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
C+ +A +M K G + + L NIL A
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN- 167
Y ++I+ H K+ +A + M D G P T+N+ + + K + + ++
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
C +E D ++ ILI+ C+ D+N+A ++ + GF ++ + LI C+ ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
++ LF+ + LGL+ T+ TYT +I K G +++ M+ +G P +TY LI
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C + V E KL++ M R ++ VT TL CK A LL+ +
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---K 632
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
+ T L+ C + A F +L S VT A S++G + + +DL
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDL 692
Query: 408 VREMEERGI 416
+ RG+
Sbjct: 693 TERI-SRGV 700
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSG 450
++R FS+ G A +V +M+ +G+TPS +T +++ V +E A ++ M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 451 FSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRAL 510
PD +Y +++ G G ++EA + M + P++ +++ C+ G RA+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+M + G PN+ +++S I LC+ G +A +L +M++ G KP+V + L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 243/523 (46%), Gaps = 42/523 (8%)
Query: 85 PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
PR+ LC +SS+ ++ + + D L D A+ F M+ S P F
Sbjct: 24 PRTTLCWERSFAGASSDDCRENLSRKVLQDLKL-----DDAIGLFGDMVKSRPFPSIVEF 78
Query: 145 NSLLIFVIKSCSFDKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
+ LL + K FD + + ++Y++ I I C L+ A +L ++ +
Sbjct: 79 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 204 MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKD 263
+G+ P++V SL++G C I A L ++ E+G T+T L+ GLF++ +
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 264 GFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLIC 323
E+M + G P L TY +I+ C G+ L ++M ++ +VV YNT+I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 324 GLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL----------- 372
GLCK + +A L ++M+ GI P+V TYN LI C+ G A RL
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 373 ----FNQL---------------------KSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
FN L KS P VV YN LI+ F K + ++
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
REM +RG+ + VTYT LI F ++ D + A ++ M G PD+ TY +L+ GLC
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
GN++ A +F M + ++ + V Y MI CK G L ++ KG+ PN+ +
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAK 570
Y++ + C+ G EA+ L +M + G P+ YN L RA+
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 9/454 (1%)
Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
+S+LS AL +M+ G P T NSLL + + VE+
Sbjct: 123 RSQLS-LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ---MVEMGYQP 178
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D +F L+ G + ++A ++ ++ G P++V Y ++I+G CK G+ + A L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
K+ + + A Y +I GL K D F+ + KM+ G+ P ++TYN LI CN
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM-KMAGISPNVIT 352
G+ S+ +L +M + + ++V +N LI KE ++ EAE+L D+M K P+V+
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
YN LI GFC ++ +F ++ G + VTY LI F +A + A + ++M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
G+ P +TY IL+D + ++E A ++ MQK D+ TY +I LC G ++
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
+ LF S+ ++PN V Y M+ G+C++G A L EM E G +PN +Y++ I
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+DG + L+ +M G S + ++
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 218/428 (50%), Gaps = 4/428 (0%)
Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYS 177
+R+S +A+ QM++ G +P + TF +L+ + + + K + D+ +
Sbjct: 159 NRIS-EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
+G +I G C+ G+ + A +LN++E+ +VVIY ++IDG CK ++ A LF K+
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
G+ TY LI L G D M ++P L +N LI + EGK+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 298 EGFKLFDEM-RHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
E KL+DEM + + +VV YNTLI G CK RV+E + +M G+ N +TY L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I GF A + D A +F Q+ S+G P ++TYN+L+ GN + A + M++R +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
VTYT +I++ ++ +E ++++ + G P+V TY ++ G C KG +EA
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 477 LFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLC 536
LF M E PN YN +I ++G+ + L+ EM G + +++ +L
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML- 576
Query: 537 QDGKWPEA 544
DG+ ++
Sbjct: 577 HDGRLDKS 584
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 76/201 (37%), Gaps = 36/201 (17%)
Query: 98 SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
S V + Y ++I ++R D A F QM+ GV P T+N LL + + +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVI---- 212
+ + F + ++LD+ ++ +I+ C+AG + +++ L G PNVV
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 213 -------------------------------YTSLIDGCCKNGDIERAKMLFRKIGELGL 241
Y +LI ++GD + L +++ G
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 242 VATQHTYTVLICGLFKNGLQK 262
T+ ++ L L K
Sbjct: 563 AGDASTFGLVTNMLHDGRLDK 583
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 227/458 (49%), Gaps = 3/458 (0%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLDS-GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC- 169
+I+++ + L D+ L M+D G++P ++ +N +L ++ S + ++
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
++ DV +F +LIK C A L A +L + G P+ +T+++ G + GD++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKM-QLNGVSPSLYTYNCLIH 288
+ ++ E G + + V++ G K G +D F ++M +G P YT+N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
C G V ++ D M +V TYN++I GLCK V+EA +LDQM SP
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
N +TYN LI C + ++A L L S G P V T+N LI+ N ++A +L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
EM +G P E TY +LIDS +++A M M+ SG + V TY LI G C
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
+EA ++F+ M + N V YN +I G CK A +L+ +M +G P+ +Y
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+S + C+ G +A ++ M G +P + Y L
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Score = 232 bits (591), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 213/423 (50%), Gaps = 10/423 (2%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLD-SGVRPRSNTFNSLLIFVIKSCSFDKGW----LFFSE 166
I+ K + AL + +M + G P TFN+L+ + K+ + E
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+ DVY++ +I G C+ G++ +A EVL+Q+ SPN V Y +LI CK +
Sbjct: 325 G---YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
E A L R + G++ T+ LI GL + E +E+M+ G P +TYN L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I C++GK+ E + +M A +V+TYNTLI G CK + +EAE + D+M++ G+
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
S N +TYN LIDG C + + A +L +Q+ GQ P TYN L+ F + G+ K A+D
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
+V+ M G P VTY LI ++ +E A ++ +Q G + + Y +I GL
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 467 MKGNMKEASKLFNSMWETKLEPNDVV-YNMMIFGYCKEGNSYR-ALRLLGEMNEKGLVPN 524
K EA LF M E P D V Y ++ G C G R A+ L E+ EKG VP
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 525 IAS 527
+S
Sbjct: 682 FSS 684
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 228/472 (48%), Gaps = 38/472 (8%)
Query: 136 GVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLNKA 194
G++P +TFN L+ + ++ L + + D +F +++G E GDL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 195 FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG-ELGLVATQHTYTVLIC 253
+ Q+ E G S + V ++ G CK G +E A +++ + G Q+T+ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
GL K G K E + M G P +YTYN +I C G+V E ++ D+M R+ +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 314 NVVTYNTLICGLCKEMRVQEAERL-----------------------------------L 338
N VTYNTLI LCKE +V+EA L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKA 398
++M+ G P+ TYN LID C G+ D+A + Q++ +G + SV+TYN LI F KA
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 399 GNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTY 458
++ A ++ EME G++ + VTY LID +S +E A ++ M G PD YTY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 459 GVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNE 518
L+ C G++K+A+ + +M EP+ V Y +I G CK G A +LL +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 519 KGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL-YNILYRA 569
KG+ +Y+ I L + K EA L +ML+ P ++ Y I++R
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
SP Y ++ G + K+ ++M+ T+ LI + E
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 337 LLDQM-KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAF 395
++D M G+ P+ YN++++ D ++ G P V T+NVLI+A
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
+A + A ++ +M G+ P E T+T ++ ++ D++ A + M + G S
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
+ V++HG C +G +++A M + P+ +N ++ G CK G+ A+ ++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 515 EMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
M ++G P++ +Y+S I LC+ G+ EA +L+QM+ P+ YN L
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 37/260 (14%)
Query: 342 KMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK---- 397
K SP Y +++ +G D ++ +KS+ T+ +LI ++++
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 398 -------------------------------AGNS-KMASDLVREMEERGITPSEVTYTI 425
GNS K+ +M GI P T+ +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
LI + R+ + A M M G PD T+ ++ G +G++ A ++ M E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPEA 544
++V N+++ G+CKEG AL + EM N+ G P+ ++++ + LC+ G A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 545 EVLLNQMLKLGLKPSVSLYN 564
+++ ML+ G P V YN
Sbjct: 315 IEIMDVMLQEGYDPDVYTYN 334
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 426 LIDSFVRSDDMEKAFEMYSLM-QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWET 484
L+DS D A +++L +K FSP+ Y ++ L G+ + K+ M +
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 485 KLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM-NEKGLVPNIASYSSTIGVLCQDGKWPE 543
+ E + ++I Y + L ++ M +E GL P+ Y+ + +L
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 544 AEVLLNQMLKLGLKPSVSLYNILYRA 569
E+ +M G+KP VS +N+L +A
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKA 198
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 282/581 (48%), Gaps = 48/581 (8%)
Query: 27 KAFSLFNWASRQGLQHTP--QSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
+AF LF +SR + + QS S ++ +L +H + A+ LI +I R+ S
Sbjct: 56 EAFKLFETSSRSRVSKSNDLQSFSAVIHVL---TGAHKYTLARCLIKSLIE-RLKRHS-E 110
Query: 85 PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
P ++ L +P ++ +I L+ L ++AL+ +M S P S
Sbjct: 111 PSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKAC 167
Query: 145 NSLLIFVIKSCSFDKGWLFFSE--NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
S+L +++ FD W+ + +R V DV+ + +L + C + G +K ++L+++
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVP-DVHIYFVLFQCCFKQGLYSKKEKLLDEMT 226
Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
+G PNV IYT I C++ +E A+ +F + + G++ +TY+ +I G K G +
Sbjct: 227 SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286
Query: 263 DGFEFYEKMQLN-----------------------------------GVSPSLYTYNCLI 287
+ Y+++ + GV P+LY YNCLI
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H +C G + E L EM ++ +V TY LI GLC E +V EA RL +MK I
Sbjct: 347 HGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P+ TYN LI G+C ++A L +++ ++G P+++T++ LI + + K A L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
EM +GI P VTYT LID+ + +M++A +YS M ++G P+ +T+ L+ G
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
+G + A + + + N V + +I G C+ G RA R +M G+ P+I S
Sbjct: 527 EGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICS 586
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
Y S + Q+ + + +L M+K G+ P++ + +L R
Sbjct: 587 YVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 158/302 (52%)
Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
Y+ M G+ P ++ Y L +G S+ KL DEM + NV Y I LC+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
+ +++EAE++ + MK G+ PN+ TY+ +IDG+C G +A+ L+ ++ P+VV
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
+ L+ F KA A L M + G+ P+ Y LI +S +M +A + S M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
SPDV+TY +LI+GLC++ + EA++LF M ++ P+ YN +I GYCKE N
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
+AL L EM G+ PNI ++S+ I C A L +M G+ P V Y L
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 568 RA 569
A
Sbjct: 487 DA 488
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 185/380 (48%), Gaps = 3/380 (0%)
Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCE 187
F M GV P T+++++ K+ + + + + E L +V FG L+ G C+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
A +L A + + + G PN+ +Y LI G CK+G++ A L ++ L L T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
YT+LI GL + ++KM+ + PS TYN LIH YC E + + L EM
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
V N++T++TLI G C ++ A L +M + GI P+V+TY LID
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
+A RL++ + G P+ T+ L+ F K G +A D +E ++ + V +T LI
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
+ ++ + +A +S M+ G +PD+ +Y ++ G + + + L M +T +
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 488 PNDVVYNMMIFGYCKEGNSY 507
PN +V ++ Y + N Y
Sbjct: 617 PNLLVNQLLARFY--QANGY 634
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 1/373 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSEN 167
Y ++ID + K+ QA + ++L + + P F +L+ K+ LF
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ V+ ++Y + LI G C++G++ +A +L+++E + SP+V YT LI+G C +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A LF+K+ + + TY LI G K + + +M +GV P++ T++ LI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
YCN + L+ EM + + +VVTY LI KE ++EA RL M AGI
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PN T+ L+DGF G A + + + V + LI + G AS
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+M GITP +Y ++ ++ + + M K+G P++ +L
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQA 631
Query: 468 KGNMKEASKLFNS 480
G +K A L NS
Sbjct: 632 NGYVKSACFLTNS 644
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%)
Query: 306 MRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGE 365
M R + +V Y L K+ + E+LLD+M GI PNV Y I C +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 366 TDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTI 425
++A ++F +K +G P++ TY+ +I + K GN + A L +E+ + P+ V +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 426 LIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK 485
L+D F ++ ++ A ++ M K G P++Y Y LIHG C GNM EA L + M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 486 LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAE 545
L P+ Y ++I G C E A RL +M + + P+ A+Y+S I C++ +A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 546 VLLNQMLKLGLKPSVSLYNILYRAKNNI 573
L ++M G++P++ ++ L N+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNV 457
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 6/337 (1%)
Query: 84 TPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
T RSL H+ + F N +Y +I H KS +A+ +M + P T
Sbjct: 322 TARSLFVHMVK-FGVDPNLY----VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 144 FNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
+ L+ I+ + LF ++ ++ LI G C+ ++ +A ++ +++
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
G PN++ +++LIDG C DI+ A L+ ++ G+V TYT LI FK K
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
+ Y M G+ P+ +T+ CL+ + EG++S + E + N V + LI
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
GLC+ + A R M+ GI+P++ +Y ++ G L + G
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
P+++ +L R + G K A L + ++ S
Sbjct: 617 PNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSNS 653
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/571 (27%), Positives = 269/571 (47%), Gaps = 26/571 (4%)
Query: 22 KLPPLKAFSLFNWA-SRQGLQHTPQSISIILRLLL-SKMSSHSHAAAQTLILKIISGRIT 79
K P AF F W+ +R G +H+ +S I+ +L ++M +++ + ++L +
Sbjct: 119 KEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF 178
Query: 80 SSSFTPRS--------------------LLCHLTQLFPSSSN--PVTKSRLYESIIDAHL 117
++ R+ +L Q F K+R ++
Sbjct: 179 DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238
Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVY 176
K +D +F M+ +G RP T+N ++ + K + F E + + + D
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
++ +I G + G L+ ++++M P+V+ Y +LI+ CK G + +R++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
GL +Y+ L+ K G+ + +FY M+ G+ P+ YTY LI C G +
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
S+ F+L +EM V NVVTY LI GLC R++EAE L +M AG+ PN+ +YN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 357 IDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGI 416
I GF A D+A L N+LK G P ++ Y I + A ++ EM+E GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 417 TPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
+ + YT L+D++ +S + + + M++ V T+ VLI GLC + +A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 477 LFNSMW-ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
FN + + L+ N ++ MI G CK+ A L +M +KGLVP+ +Y+S +
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ G EA L ++M ++G+K + Y L
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 4/365 (1%)
Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
GF +++ LID G +E A F K+ + + L+ K G D
Sbjct: 191 GFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
F++ M G P+++TYN +I C EG V LF+EM+ R + + VTYN++I G
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
K R+ + ++MK P+VITYN LI+ FC G+ + ++K NG P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
VV+Y+ L+ AF K G + A +M G+ P+E TYT LID+ + ++ AF + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
M + G +V TY LI GLC MKEA +LF M + PN YN +I G+ K
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
N RAL LL E+ +G+ P++ Y + I LC K A+V++N+M + G+K + +Y
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 565 ILYRA 569
L A
Sbjct: 547 TLMDA 551
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 165/384 (42%), Gaps = 39/384 (10%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I+ K L ++ +M +G++P ++++L+ K + F+ + R
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+V L + Y++ LI C+ G+L+ AF + N++ ++G NVV YT+LIDG C +
Sbjct: 395 -RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
+ A+ LF K+ G++ +Y LI G K E +++ G+ P L Y
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 287 IHEYC------------NE-----------------------GKVSEGFKLFDEMRHREV 311
I C NE G +EG L DEM+ ++
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA-GISPNVITYNKLIDGFCDAGETDKAF 370
VVT+ LI GLCK V +A +++ G+ N + +IDG C + + A
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
LF Q+ G P Y L+ K GN A L +M E G+ + YT L+
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPD 454
+ ++KA M G PD
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHPD 717
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 4/343 (1%)
Query: 109 YESIIDAHLK-SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSE 166
Y S+IDA+ K LSD A ++ML GV T+ +L+ + + + LF
Sbjct: 405 YTSLIDANCKIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+ V ++ S+ LI G +A ++++A E+LN+L+ G P++++Y + I G C I
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
E AK++ ++ E G+ A YT L+ FK+G +G ++M+ + ++ T+ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 287 IHEYCNEGKVSEGFKLFDEMRHR-EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
I C VS+ F+ + + + N + +I GLCK+ +V+ A L +QM G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
+ P+ Y L+DG G +A L +++ G ++ Y L+ S + A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
+ EM GI P EV ++ +++A E+ S + K
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%)
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P ++ L D G ++A + F+++K P + N L+ F+K G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
++M G P+ TY I+ID + D+E A ++ M+ G PD TY +I G
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
G + + F M + EP+ + YN +I +CK G L EM GL PN+ S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
YS+ + C++G +A M ++GL P+ Y L A I
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 255/539 (47%), Gaps = 74/539 (13%)
Query: 105 KSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF 164
K +Y+ I K + ++A F M+ SG+ P++ + SL+ + + +G+
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 165 SENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKN 223
E + + + + Y++G ++KG C +GDL+ A+ ++ ++ G PNVVIYT+LI +N
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 224 GDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTY 283
A + +++ E G+ Y LI GL K + F +M NG+ P+ +TY
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 284 NC-----------------------------------LIHEYCNEGKVSEGFKLFDEMRH 308
LI+EYC +GKV E + M
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585
Query: 309 REVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDK 368
+ + + TY L+ GL K +V +AE + +M+ GI+P+V +Y LI+GF G K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
A +F+++ G +P+V+ YN+L+ F ++G + A +L+ EM +G+ P+ VTY +ID
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS-------- 480
+ +S D+ +AF ++ M+ G PD + Y L+ G C +++ A +F +
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765
Query: 481 --------MW-------ETKLE---------------PNDVVYNMMIFGYCKEGNSYRAL 510
W E K E PNDV YN+MI CKEGN A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 511 RLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
L +M L+P + +Y+S + + G+ E + ++ + G++P +Y+++ A
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/669 (26%), Positives = 281/669 (42%), Gaps = 134/669 (20%)
Query: 25 PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
P K S FNW Q + T Q + L L + S A +++ ++I +
Sbjct: 77 PSKLLSFFNWVDSQKV--TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVW 134
Query: 85 PRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTF 144
+ C +Q F S+ L+ + D ++ ++A+F F + + PR +
Sbjct: 135 SSIVRC--SQEFVGKSD---DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRC 189
Query: 145 NSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEE 203
LL +++ D W ++ V DV ++ +LI C AG++ +VL + E+
Sbjct: 190 KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249
Query: 204 ---------------------MGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
G P Y LIDG CK +E AK L ++ LG+
Sbjct: 250 EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309
Query: 243 ATQHTYTVLICGLFKN-----------------------------------GLQKDGFEF 267
HTY++LI GL K G+ +
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC- 326
++ M +G+ P Y LI YC E V +G++L EM+ R + + TY T++ G+C
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 327 -----------KEM-----------------------RVQEAERLLDQMKMAGISPNVIT 352
KEM R +A R+L +MK GI+P++
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
YN LI G A D+A ++ NG P+ TY I + +A A V+EM
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 413 ERGITPSEV-----------------------------------TYTILIDSFVRSDDME 437
E G+ P++V TYT+L++ ++D ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 438 KAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
A E++ M+ G +PDV++YGVLI+G GNM++AS +F+ M E L PN ++YNM++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 498 FGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLK 557
G+C+ G +A LL EM+ KGL PN +Y + I C+ G EA L ++M GL
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 558 PSVSLYNIL 566
P +Y L
Sbjct: 730 PDSFVYTTL 738
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 251/496 (50%), Gaps = 44/496 (8%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y ++I L++ A+ +M + G+ P +NSL+I + K+ D+ F E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 168 -RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
++ + +++G I G EA + A + + ++ E G PN V+ T LI+ CK G +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
A +R + + G++ TYTVL+ GLFKN D E + +M+ G++P +++Y L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I+ + G + + +FDEM + NV+ YN L+ G C+ +++A+ LLD+M + G+
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSP----------------------- 383
PN +TY +IDG+C +G+ +AFRLF+++K G P
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 384 -----------SVVTYNVLIRAFSKAGNSKMASDLV-REME---ERGITPSEVTYTILID 428
S +N LI K G +++ ++++ R M+ +R P++VTY I+ID
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
+ ++E A E++ MQ + P V TY L++G G E +F+ +EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN-----IASYSSTIGVLCQDGKWPE 543
+ ++Y+++I + KEG + +AL L+ +M K V + I++ + + + G+
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 544 AEVLLNQMLKLGLKPS 559
AE ++ M++L P
Sbjct: 934 AEKVMENMVRLQYIPD 949
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 55/462 (11%)
Query: 66 AQTLILKIISGRITSSSFTPRSLLCHLTQL--FPSSSNPVTKSR---------LYESIID 114
A++ +++++ + ++FT + + + F S+ V + R L +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 115 AHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VEL 173
+ K +A + M+D G+ + T+ L+ + K+ D F E R K +
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
DV+S+G+LI G + G++ KA + +++ E G +PNV+IY L+ G C++G+IE+AK L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
++ GL TY +I G K+G + F +++M+L G+ P + Y L+ C
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 294 GKVSEGFKLF--------------------------------------DEMRHREVACNV 315
V +F D R N
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 316 VTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQ 375
VTYN +I LCKE ++ A+ L QM+ A + P VITY L++G+ G + F +F++
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 376 LKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM-----EERGITPSEVTYTILIDSF 430
+ G P + Y+V+I AF K G + A LV +M + G S T L+ F
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
+ +ME A ++ M + + PD T LI+ C+ N +
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 32/393 (8%)
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
SF L C G KA V+ ++ E + P +++S++ R F
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIV----------RCSQEFVGK 147
Query: 237 GELGLVATQHTYTVLICGLFKNG-LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK 295
+ G++ + +L G G +++ F F M L V P L L+ +
Sbjct: 148 SDDGVL-----FGILFDGYIAKGYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNR 201
Query: 296 VSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNK 355
+ + ++ M R V +V TY+ LI C+ VQ + +L + + + +
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL----- 256
Query: 356 LIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERG 415
D A +L + G P TY+VLI K + A L+ EM+ G
Sbjct: 257 ---------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 416 ITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEAS 475
++ TY++LID ++ + + A + M G + Y Y I + +G M++A
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 476 KLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVL 535
LF+ M + L P Y +I GYC+E N + LL EM ++ +V + +Y + + +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 536 CQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
C G A ++ +M+ G +P+V +Y L +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 48/326 (14%)
Query: 129 FHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCE 187
F +M++ G+ P +N LL +S +K E K + + ++ +I G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
+GDL +AF + ++++ G P+ +YT+L+DGCC+ D+ERA +F + G ++
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAP 768
Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGV-----SPSLYTYNCLIHEYCNEGKVSEGFKL 302
+ LI +FK G + E ++ ++G P+ TYN +I C EG + +L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 303 FDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID---- 358
F +M++ + V+TY +L+ G K R E + D+ AGI P+ I Y+ +I+
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 359 ------------------------------------GFCDAGETDKAFRLFNQLKSNGQS 382
GF GE + A ++ +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLV 408
P T LI + N ++ +D V
Sbjct: 948 PDSATVIELINESCISSNQRVEADAV 973
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/619 (27%), Positives = 280/619 (45%), Gaps = 71/619 (11%)
Query: 15 NLISR---MAKLPPLKAFSLFNWASRQG-LQHTPQSISIILRLLL-SKMSSHSHAAAQTL 69
NL+ R M ++ P AF FNW RQ ++ + Q+ + +L +L + + S ++ A+
Sbjct: 86 NLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERS 145
Query: 70 I---LKIISGRITSSSFTPRSLLCH------------LTQLFPSSSNPVTKSRLYESIID 114
I + I + SF L + + F S + + S+ +
Sbjct: 146 IDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRN 205
Query: 115 AHL------KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---DKGWLFFS 165
++ SR+ ++A + M++ G+ P TFN++L K+ DK WL
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL--E 263
Query: 166 ENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
R +E ++ ILI G + G + +A + GF+ + LI+G CK G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
+ A + ++ G+ T TY + IC L G D E M +P + +YN
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNT 379
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
L+H Y GK E LFD++R ++ ++VTYNTLI GLC+ ++ A+RL ++M
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 346 ISPNVITYNKLIDGFCD-----------------------------------AGETDKAF 370
I P+VITY L+ GF G++DKAF
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 371 RLFNQL-KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
RL ++ ++ +P + YNV I K GN A + R++ G+ P VTYT +I
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
++ + + A +Y M + P V TY VLI+G G +++A + M + + PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLN 549
+ +N +++G CK GN A R L +M E+G+ PN SY+ I C KW E L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 550 QMLKLGLKPSVSLYNILYR 568
+ML ++P + L++
Sbjct: 680 EMLDKEIEPDGYTHRALFK 698
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 168/360 (46%), Gaps = 10/360 (2%)
Query: 52 RLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYES 111
R LLS M++ + TL+ G I F SLL L +P + Y +
Sbjct: 363 RELLSSMAAPDVVSYNTLM----HGYIKMGKFVEASLL--FDDLRAGDIHPSIVT--YNT 414
Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCK 170
+ID +S + A +M + P T+ +L+ +K+ + + E R
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF-SPNVVIYTSLIDGCCKNGDIERA 229
++ D Y++ G GD +KAF + ++ +P++ IY IDG CK G++ +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 230 KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHE 289
RKI +GLV TYT +I G +NG K Y++M + PS+ TY LI+
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 290 YCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPN 349
+ G++ + F+ EM+ R V NV+T+N L+ G+CK + EA R L +M+ GI PN
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 350 VITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR 409
+Y LI CD + ++ +L+ ++ P T+ L + K S+ L R
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLER 714
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 274/549 (49%), Gaps = 34/549 (6%)
Query: 41 QHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLL---CHLTQLFP 97
+ T +S +++L +L+S + H A + ++S +I + FT ++ C + ++
Sbjct: 179 EPTFKSYNVVLEILVS---GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 98 SSS--------NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLI 149
+ S V S +Y+++I + K ++AL +M G P + TFN +++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 150 FVIKSCSFDKGWLFFSE-----NRCKVE---LDVYSFGILIKGCCEAGDLNKAFEVLNQL 201
+ C FD+ +E NR + D ++G L+ G C+ G ++ A ++ ++
Sbjct: 296 GL---CKFDR----INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 202 EEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGELGLVATQHTYTVLICGLFKNGL 260
+ P +VI+ +LI G +G ++ AK +L + G+V TY LI G +K GL
Sbjct: 349 PK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 261 QKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNT 320
E M+ G P++Y+Y L+ +C GK+ E + + +EM + N V +N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 321 LICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNG 380
LI CKE R+ EA + +M G P+V T+N LI G C+ E A L + S G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 381 QSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAF 440
+ VTYN LI AF + G K A LV EM +G E+TY LI R+ +++KA
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 441 EMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGY 500
++ M + G +P + +LI+GLC G ++EA + M P+ V +N +I G
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 501 CKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
C+ G L + ++ +G+ P+ ++++ + LC+ G +A +LL++ ++ G P+
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 561 SLYNILYRA 569
++IL ++
Sbjct: 705 RTWSILLQS 713
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 1/331 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y S+I + K L AL H M + G +P ++ L+ K D+ + +E
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
++ + F LI C+ + +A E+ ++ G P+V + SLI G C+ +I+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A L R + G+VA TY LI + G K+ + +M G TYN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C G+V + LF++M A + ++ N LI GLC+ V+EA +M + G +
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P+++T+N LI+G C AG + +F +L++ G P VT+N L+ K G A L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEK 438
+ E E G P+ T++IL+ S + + +++
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 6/295 (2%)
Query: 274 NGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQE 333
NG S Y LI + G+ +L +M+ + + +++ K +
Sbjct: 105 NGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQ 164
Query: 334 AERLLDQMK-MAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLI 392
RL+ +M+ + P +YN +++ A +F + S P++ T+ V++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 393 RAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFS 452
+AF A L+R+M + G P+ V Y LI S + + + +A ++ M G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 453 PDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
PD T+ +I GLC + EA+K+ N M P+D+ Y ++ G CK G A L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 513 LGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNIL 566
+ + P I +++ I G+ +A+ +L+ M+ G+ P V YN L
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 235/456 (51%), Gaps = 11/456 (2%)
Query: 118 KSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL---- 173
+S+LS AL +M+ G P T +SLL S + VE+
Sbjct: 131 RSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ---MVEMGYKP 186
Query: 174 DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLF 233
D ++F LI G ++A +++Q+ + G P++V Y ++++G CK GDI+ A L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 234 RKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNE 293
K+ + A + +I L K + + + +M+ G+ P++ TYN LI+ CN
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITY 353
G+ S+ +L M +++ NVVT+N LI KE ++ EAE+L ++M I P+ ITY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 354 NKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
N LI+GFC D+A ++F + S P++ TYN LI F K + +L REM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 414 RGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKE 473
RG+ + VTYT +I F ++ D + A ++ M + D+ TY +L+HGLC G +
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A +F + ++++E N +YN MI G CK G A L ++ K P++ +Y++ I
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMIS 543
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC EA+ L +M + G P+ YN L RA
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 227/456 (49%), Gaps = 6/456 (1%)
Query: 117 LKSRLSD-----QALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-K 170
L++RLSD A+ F M+ S P FN LL V K F+ + +
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 171 VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK 230
+ D+Y++ I I C L+ A VL ++ ++G+ P++V +SL++G C + I A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 231 MLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEY 290
L ++ E+G T+T LI GLF + + ++M G P L TY +++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 291 CNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNV 350
C G + L ++M + NVV +NT+I LCK V+ A L +M+ GI PNV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 351 ITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVRE 410
+TYN LI+ C+ G A RL + + +P+VVT+N LI AF K G A L E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 411 MEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGN 470
M +R I P +TY +LI+ F + +++A +M+ M P++ TY LI+G C
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 471 MKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSS 530
+++ +LF M + L N V Y +I G+ + G+ A + +M + +I +YS
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 531 TIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ LC GK A V+ + K ++ ++ +YN +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 221/448 (49%), Gaps = 6/448 (1%)
Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLL--IFVIKSCSFDKGWLFFSENR 168
S+++ + S+ A+ QM++ G +P + TF +L+ +F+ S + R
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
+ D+ ++G ++ G C+ GD++ A +LN++E NVVI+ ++ID CK +E
Sbjct: 218 -GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
A LF ++ G+ TY LI L G D M ++P++ T+N LI
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
+ EGK+ E KL +EM R + + +TYN LI G C R+ EA+++ M P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
N+ TYN LI+GFC + LF ++ G + VTY +I+ F +AG+ A +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
++M + +TY+IL+ ++ A ++ +QKS +++ Y +I G+C
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
G + EA LF S+ ++P+ V YN MI G C + A L +M E G +PN +Y
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
++ I +D + L+ +M G
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 48/373 (12%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW------ 161
++ +IID+ K R + A+ F +M G+RP T+NSL+ + C++ + W
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL---CNYGR-WSDASRL 315
Query: 162 ---------------------LFFSENRC-------------KVELDVYSFGILIKGCCE 187
FF E + ++ D ++ +LI G C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 188 AGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHT 247
L++A ++ + PN+ Y +LI+G CK +E LFR++ + GLV T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 248 YTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMR 307
YT +I G F+ G +++M N V + TY+ L+H C+ GK+ +F ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 308 HREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETD 367
E+ N+ YNT+I G+CK +V EA L + I P+V+TYN +I G C
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQ 552
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
+A LF ++K +G P+ TYN LIRA + + +++L++EM G T + L+
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LV 611
Query: 428 DSFVRSDDMEKAF 440
+ + ++K+F
Sbjct: 612 TNMLHDGRLDKSF 624
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 140/275 (50%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
KV + LF +M ++V +N L+ + K + + L +QM+ GIS ++ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
I+ FC + A + ++ G P +VT + L+ + + A LV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P T+T LI + +A + M + G PD+ TYG +++GLC +G++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
L N M +++ N V++N +I CK + A+ L EM KG+ PN+ +Y+S I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC G+W +A LL+ ML+ + P+V +N L A
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 1/433 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +++ + K A+ M GV T+N L+ + +S KG+L + R
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ + + ++ LI G G + A ++LN++ G SPN V + +LIDG G+ +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A +F + GL ++ +Y VL+ GL KN FY +M+ NGV TY +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C G + E L +EM + ++VTY+ LI G CK R + A+ ++ ++ G+S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PN I Y+ LI C G +A R++ + G + T+NVL+ + KAG A +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+R M GI P+ V++ LI+ + S + KAF ++ M K G P +TYG L+ GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
G+++EA K S+ + V+YN ++ CK GN +A+ L GEM ++ ++P+ +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 528 YSSTIGVLCQDGK 540
Y+S I LC+ GK
Sbjct: 651 YTSLISGLCRKGK 663
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 260/550 (47%), Gaps = 52/550 (9%)
Query: 28 AFSLFNWASRQ-GLQ--HTPQSISIILRLLLSKMSSHSHAAAQTLI--LKIISGRITSSS 82
A W +Q GL+ H Q + I +L+ + + A+ ++ L ++SG+ SS
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVR---ARMYDPARHILKELSLMSGK---SS 106
Query: 83 FTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSN 142
F +L+ T +SNP +Y+ +I +L+ + +L F M G P
Sbjct: 107 FVFGALM---TTYRLCNSNP----SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159
Query: 143 TFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLE 202
T N++L V+KS ++ V+SF L ++
Sbjct: 160 TCNAILGSVVKSGE---------------DVSVWSF-------------------LKEML 185
Query: 203 EMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQK 262
+ P+V + LI+ C G E++ L +K+ + G T TY ++ K G K
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 263 DGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
E + M+ GV + TYN LIH+ C ++++G+ L +MR R + N VTYNTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 323 CGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQS 382
G E +V A +LL++M G+SPN +T+N LIDG G +A ++F +++ G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
PS V+Y VL+ K +A M+ G+ +TYT +ID ++ +++A +
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCK 502
+ M K G PD+ TY LI+G C G K A ++ ++ L PN ++Y+ +I+ C+
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 503 EGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
G A+R+ M +G + +++ + LC+ GK EAE + M G+ P+
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 563 YNILYRAKNN 572
++ L N
Sbjct: 546 FDCLINGYGN 555
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 38/427 (8%)
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
+F LI G G+ +A ++ +E G +P+ V Y L+DG CKN + + A+ + ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGK- 295
G+ + TYT +I GL KNG + +M +G+ P + TY+ LI+ +C G+
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 296 ----------------------------------VSEGFKLFDEMRHREVACNVVTYNTL 321
+ E ++++ M + T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 322 ICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQ 381
+ LCK +V EAE + M GI PN ++++ LI+G+ ++GE KAF +F+++ G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 382 SPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFE 441
P+ TY L++ K G+ + A ++ + V Y L+ + +S ++ KA
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634
Query: 442 MYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK--LEPNDVVYNMMIFG 499
++ M + PD YTY LI GLC KG A LF E + + PN V+Y + G
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDG 693
Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
K G + +M+ G P+I + ++ I + GK + LL +M P+
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 560 VSLYNIL 566
++ YNIL
Sbjct: 754 LTTYNIL 760
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 214/461 (46%), Gaps = 4/461 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFF-SEN 167
++ +I+ + S +A F +M G P T+ SLL + K + F S +
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+D + L+ C++G+L KA + ++ + P+ YTSLI G C+ G
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 228 RAKMLFRKIGEL--GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
A +LF K E ++ + YT + G+FK G K G F E+M G +P + T N
Sbjct: 666 IA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
+I Y GK+ + L EM ++ N+ TYN L+ G K V + L + + G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
I P+ +T + L+ G C++ + ++ G T+N+LI G A
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
DLV+ M GI+ + T ++ R+ +++ + M K G SP+ Y LI+GL
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
C G++K A + M K+ P +V + M+ K G + A LL M + LVP I
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
AS+++ + + C++G EA L M GLK + YN+L
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 145/629 (23%), Positives = 256/629 (40%), Gaps = 113/629 (17%)
Query: 49 IILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRL 108
+I LL++M S + +I G I+ +F L + + +T S +
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA-----LKMFYMMEAKGLTPSEV 369
Query: 109 -YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE- 166
Y ++D K+ D A ++ +M +GV T+ ++ + K+ D+ + +E
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 167 NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
++ ++ D+ ++ LI G C+ G A E++ ++ +G SPN +IY++LI CC+ G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
+ A ++ + G T+ VL+ L K G + EF M +G+ P+ +++CL
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 287 IHEYCNEGKVSEGFKLFDEM-------------------------RHRE----------V 311
I+ Y N G+ + F +FDEM R E
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGET----- 366
A + V YNTL+ +CK + +A L +M I P+ TY LI G C G+T
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 367 ----------------------DKAFR---------LFNQLKSNGQSPSVVTYNVLIRAF 395
D F+ Q+ + G +P +VT N +I +
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 396 SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDV 455
S+ G + +DL+ EM + P+ TY IL+ + + D+ +F +Y + +G PD
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 456 YTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL--- 512
T L+ G+C ++ K+ + +E + +NM+I C G A L
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849
Query: 513 --------------------------------LGEMNEKGLVPNIASYSSTIGVLCQDGK 540
L EM+++G+ P Y I LC+ G
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
A V+ +M+ + P + + RA
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 215/504 (42%), Gaps = 77/504 (15%)
Query: 97 PSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS 156
P++ + V +Y +++ A KS +A+ F +M+ + P S T+ SL+ + +
Sbjct: 608 PAAVDTV----MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 157 FDKGWLFF--SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
LF +E R V + + + G +AG Q++ +G +P++V
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
++IDG + G IE+ L ++G TY +L+ G K F Y + LN
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 275 GVSPS-----------------------------------LYTYNCLIHEYCNEGKVSEG 299
G+ P YT+N LI + C G+++
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
F L M ++ + T + ++ L + R QE+ +L +M GISP Y LI+G
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903
Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
C G+ AF + ++ ++ P V + ++RA +K G + A+ L+R M + + P+
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963
Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
++T L+ ++ ++ +A E+ +M G D+ +Y VLI GLC KG+M A +L+
Sbjct: 964 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023
Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQD 538
EM G + N +Y + I G+L ++
Sbjct: 1024 -----------------------------------EMKGDGFLANATTYKALIRGLLARE 1048
Query: 539 GKWPEAEVLLNQMLKLGLKPSVSL 562
+ A+++L +L G S+SL
Sbjct: 1049 TAFSGADIILKDLLARGFITSMSL 1072
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 218/448 (48%), Gaps = 8/448 (1%)
Query: 87 SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
SL C + Q S P+ + ++ K D ++ +H+M + G+ +F +
Sbjct: 65 SLFCEMLQ-----SRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF-T 118
Query: 147 LLIFVIKSCSFDKGWLFFSENRCKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
+LI CS L K+ + + G L+ G C+ +A +++ ++
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
GF PNVVIY ++I+G CKN D+ A +F + + G+ A TY LI GL +G D
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
M + P++ + LI + EG + E L+ EM R V NV TYN+LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
C + +A+ + D M G P+V+TYN LI GFC + + +LF ++ G
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
TYN LI + +AG +A + M + G++P VTY IL+D + +EKA M
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
+QKS D+ TY ++I GLC +KEA LF S+ ++P+ + Y MI G C++G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 505 NSYRALRLLGEMNEKGLVPNIASYSSTI 532
A +L M E G +P+ Y T+
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 217/443 (48%), Gaps = 1/443 (0%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSFGIL 181
D A F +ML S P F +L + K FD +L+ + D+YSF IL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
I C L+ A +L ++ ++GF P++V SL++G C+ + A L + G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
V Y +I GL KN + E + M+ G+ TYN LI N G+ ++ +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
L +M R++ NV+ + LI KE + EA L +M + PNV TYN LI+GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
G A +F+ + S G P VVTYN LI F K+ + L EM +G+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
TY LI + ++ + A ++++ M G SPD+ TY +L+ LC G +++A + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
+++++ + + YN++I G C+ A L + KG+ P+ +Y + I LC+ G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 542 PEAEVLLNQMLKLGLKPSVSLYN 564
EA+ L +M + G PS +Y+
Sbjct: 481 READKLCRRMKEDGFMPSERIYD 503
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 164/300 (54%)
Query: 267 FYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLC 326
Y KM+ G+S LY++ LIH +C ++S L +M ++VT +L+ G C
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 327 KEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVV 386
+ R QEA L+D M G PNV+ YN +I+G C + + A +F ++ G V
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 387 TYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLM 446
TYN LI S +G A+ L+R+M +R I P+ + +T LID+FV+ ++ +A +Y M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 447 QKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNS 506
+ P+V+TY LI+G C+ G + +A +F+ M P+ V YN +I G+CK
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 507 YRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
++L EM +GLV + +Y++ I CQ GK A+ + N+M+ G+ P + YNIL
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 176/376 (46%)
Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
+ AF + ++ + P++V +T ++ K + L+ K+ LG+ +++T+
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
LI + KM G PS+ T L++ +C + E L D M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
NVV YNT+I GLCK + A + M+ GI + +TYN LI G ++G A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
RL + P+V+ + LI F K GN A +L +EM R + P+ TY LI+ F
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
+ A M+ LM G PDV TY LI G C +++ KLF M L +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
YN +I GYC+ G A ++ M + G+ P+I +Y+ + LC +GK +A V++
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 551 MLKLGLKPSVSLYNIL 566
+ K + + YNI+
Sbjct: 420 LQKSEMDVDIITYNII 435
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
K + F LF EM ++V + ++ + K + L +M+ GIS ++ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
LI FC A L ++ G PS+VT L+ F + + A LV M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P+ V Y +I+ ++ D+ A E++ M+K G D TY LI GL G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
++L M + K++PN + + +I + KEGN A L EM + +VPN+ +Y+S I
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
C G +A+ + + M+ G P V YN L
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 40/342 (11%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF---------- 157
+Y ++I+ K+R + AL F+ M G+R + T+N+L+ + S +
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 158 -----DKGWLFFSE---------------------NRCKVELDVYSFGILIKGCCEAGDL 191
D +FF+ R V +V+++ LI G C G L
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
A + + + G P+VV Y +LI G CK+ +E LF ++ GLV TY L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311
I G + G + + +M GVSP + TYN L+ CN GK+ + + ++++ E+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371
+++TYN +I GLC+ +++EA L + G+ P+ I Y +I G C G +A +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEE 413
L ++K +G PS Y+ +R + ++++L++ E
Sbjct: 486 LCRRMKEDGFMPSERIYDETLRDHY----TSLSAELIKAAHE 523
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 120/238 (50%)
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
++ +A L +M + P+++ + +++ + D L++++++ G S + ++
Sbjct: 58 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
+LI F + +A L+ +M + G PS VT L++ F + + ++A + M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
GF P+V Y +I+GLC ++ A ++F M + + + V YN +I G G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A RLL +M ++ + PN+ +++ I ++G EA L +M++ + P+V YN L
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 234/469 (49%), Gaps = 9/469 (1%)
Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRS-NTFNSLLIFVIKSCSFDK 159
N V R + + A+ K+ L D+A+ FH+M+D RS +FNS+L +I + +
Sbjct: 107 NRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHR 166
Query: 160 GWLFF-----SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYT 214
G F+ S + + SF ++IK C+ +++A EV + E P+ Y
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226
Query: 215 SLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN 274
+L+DG CK I+ A +L ++ G + Y VLI GL K G + + M L
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 275 GVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEA 334
G P+ TYN LIH C +GK+ + L + M + N VTY TLI GL K+ R +A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 335 ERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRA 394
RLL M+ G N Y+ LI G G+ ++A L+ ++ G P++V Y+VL+
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 395 FSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPD 454
+ G A +++ M G P+ TY+ L+ F ++ E+A +++ M K+G S +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 455 VYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLG 514
+ Y VLI GLC G +KEA +++ M ++P+ V Y+ +I G C G+ AL+L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 515 EM---NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSV 560
EM E P++ +Y+ + LC A LLN ML G P V
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR--- 168
+I A K R D+A+ F M + P T+ +L+ + K D+ L E +
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
C +Y+ +LI G C+ GDL + ++++ + G PN V Y +LI G C G +++
Sbjct: 253 CSPSPVIYN--VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 229 AKMLFRKI------------GEL--GLVA---------------------TQHTYTVLIC 253
A L ++ G L GLV QH Y+VLI
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 254 GLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC 313
GLFK G ++ + KM G P++ Y+ L+ C EGK +E ++ + M
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 314 NVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLF 373
N TY++L+ G K +EA ++ +M G S N Y+ LIDG C G +A ++
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 374 NQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREM---EERGITPSEVTYTILIDSF 430
+++ + G P V Y+ +I+ G+ A L EM EE P VTY IL+D
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
D+ +A ++ + M G PDV T ++ L K N + + F
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 190/426 (44%), Gaps = 22/426 (5%)
Query: 53 LLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESI 112
LLL +M S + + + +I G T + L L N VT + L +
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 113 IDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSC-SFDKGWLFFSENRCKV 171
LK +L D+A+ +M+ S P T+ +L+ ++K + D L S
Sbjct: 303 C---LKGKL-DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 172 ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKM 231
L+ + + +LI G + G +A + ++ E G PN+V+Y+ L+DG C+ G AK
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 232 LFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYC 291
+ ++ G + +TY+ L+ G FK GL ++ + +++M G S + + Y+ LI C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 292 NEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM---KMAGISP 348
G+V E ++ +M + + V Y+++I GLC + A +L +M + P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
+V+TYN L+DG C + +A L N + G P V+T N + S+ NS D
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS---CDKG 595
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
R E L+ ++ + A + +M +P T+ +++ +C
Sbjct: 596 RSFLEE-----------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKP 644
Query: 469 GNMKEA 474
+ A
Sbjct: 645 KKINAA 650
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 241/492 (48%), Gaps = 36/492 (7%)
Query: 111 SIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK----------- 159
S+I H K+ AL F +M G P S TF+ L+ + K+ +K
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 160 --------------GWL----------FFSENRCKVELDVYSFGILIKGCCEAGDLNKAF 195
GWL F E+ +V+ ++ C+ G ++A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463
Query: 196 EVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGL 255
E+L+++E G PNVV Y +++ G C+ +++ A+++F I E GL +TY++LI G
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 256 FKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVAC-N 314
F+N +++ E M + + + Y +I+ C G+ S+ +L M + C +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 315 VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374
++YN++I G KE + A ++M GISPNVITY L++G C D+A + +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 375 QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434
++K+ G + Y LI F K N + AS L E+ E G+ PS+ Y LI F
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 435 DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494
+M A ++Y M K G D+ TY LI GL GN+ AS+L+ M L P++++Y
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 495 MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554
+++ G K+G + +++ EM + + PN+ Y++ I ++G EA L ++ML
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 555 GLKPSVSLYNIL 566
G+ P + ++IL
Sbjct: 824 GILPDGATFDIL 835
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 200/393 (50%), Gaps = 2/393 (0%)
Query: 122 SDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGI 180
+D+A +M G+ P ++N++++ + + D + FS K ++ + Y++ I
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAK-MLFRKIGEL 239
LI GC D A EV+N + N V+Y ++I+G CK G +A+ +L I E
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 240 GLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEG 299
L + +Y +I G FK G YE+M NG+SP++ TY L++ C ++ +
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 300 FKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDG 359
++ DEM+++ V ++ Y LI G CK ++ A L ++ G++P+ YN LI G
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 360 FCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPS 419
F + G A L+ ++ +G + TY LI K GN +AS+L EM+ G+ P
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Query: 420 EVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFN 479
E+ YT++++ + K +M+ M+K+ +P+V Y +I G +GN+ EA +L +
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818
Query: 480 SMWETKLEPNDVVYNMMIFGYCKEGNSYRALRL 512
M + + P+ +++++ G RA L
Sbjct: 819 EMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/647 (24%), Positives = 284/647 (43%), Gaps = 84/647 (12%)
Query: 2 AQSKQGEGQALTLNLISRMAKLPPLKAFSLFNWASR-QGLQHTPQSISIILRLLLSKMSS 60
A+ +Q + ++ L++R P A +NWA +G +++ +L+S S
Sbjct: 65 AKPEQKDDASVIDVLLNRRNN--PEAALRFYNWARPWRGSFEDGDVFWVLIHILVS--SP 120
Query: 61 HSHAAAQTLILKIISGRITSSSFTPRS--LLCHLTQLFPSSSNPVTKSRLYESIIDAHLK 118
++ A L+++ +S +S+ TP + L+ L S V SR + +++A+ K
Sbjct: 121 ETYGRASDLLIRYVS----TSNPTPMASVLVSKLVDSAKSFGFEVN-SRAFNYLLNAYSK 175
Query: 119 SRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN-RCKVELDVYS 177
R +D A+ +QML+ V P N L +++ S + +S V+ D +
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
+L++ +A EVL++ E G P+ ++Y+ + CCK D+ A L R++
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295
Query: 238 ELGL-VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
E L V +Q TYT +I K G D ++M +G+S ++ LI +C +
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
LFD+M + N VT++ LI K +++A +M++ G++P+V + +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 357 IDGF----------------------------------CDAGETDKAFRLFNQLKSNGQS 382
I G+ C G+TD+A L ++++S G
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 383 PSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEM 442
P+VV+YN ++ + N +A + + E+G+ P+ TY+ILID R+ D + A E+
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 443 YSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETK----------------- 485
+ M S + Y +I+GLC G +A +L +M E K
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 486 -------------------LEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
+ PN + Y ++ G CK +AL + EM KG+ +I
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNNI 573
+Y + I C+ A L +++L+ GL PS +YN L N+
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 232/466 (49%), Gaps = 2/466 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y +I++A K+ ++ A + ++L G S+ SLL+ + + F
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 169 CKVEL--DVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
+V + S+ ILI G CE G L +AF + +Q+ E G P+ YT LI C G I
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
++A LF ++ G HTYTVLI GL ++G ++ KM + + PS+ TYN L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I+ YC +G+V F+L M R NV T+N L+ GLC+ + +A LL +M G+
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
SP++++YN LIDG C G + A++L + + P +T+ +I AF K G + +AS
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
+ M +GI+ EVT T LID + A + + K ++ V++ L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
+KE + + + L P+ V Y ++ G + G+ + R+L M G +PN+
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
Y+ I LCQ G+ EAE LL+ M G+ P+ Y ++ + N
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 229/508 (45%), Gaps = 55/508 (10%)
Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFF 164
+R Y +I A L D+A F +M+ G +P +T+ L+ + + ++ +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
+ ++ V ++ LI G C+ G + AFE+L +E+ PNV + L++G C+ G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
+A L +++ + GL +Y VLI GL + G ++ M + P T+
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK---------------EM 329
+I+ +C +GK M + ++ + VT TLI G+CK +M
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 330 R--------------------VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
R V+E +L ++ G+ P+V+TY L+DG +G+ +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
FR+ +K +G P+V Y ++I + G + A L+ M++ G++P+ VTYT+++
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG--LCMKG--NMKEASKLFNSMWETK 485
+V + +++A E M + G+ + Y L+ G L KG N +E++ ++ ET
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD 720
Query: 486 LE-PNDVVYNMMIFG-------------YCKEGNSYRALRLLGEMNEKGLVPNIASYSST 531
E N+++ + G CKEG + + L+ + E+G+ A
Sbjct: 721 PECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDII 779
Query: 532 IGVLCQDGKWPEAEVLLNQMLKLGLKPS 559
+ C K + L+ +LK G PS
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPS 807
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 10/349 (2%)
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLI---CGLFKNGLQKDGFEFYEKMQLNGVSPSLY 281
D + L + I GL H V + C + + K + F E ++ G +
Sbjct: 102 DPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYP 161
Query: 282 TYNCLIHEYCNEGKVSEGFKLFDEMRHREV---ACNVVTYNTLICGLCKEMRVQEAERLL 338
Y+ L+ K+ GF + R E ++ Y T++ LCK + AE +
Sbjct: 162 CYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 339 DQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQL-KSNGQSPSVVTYNVLIRAFSK 397
++ G + L+ GFC A ++F+ + K +P+ V+Y++LI +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 398 AGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYT 457
G + A L +M E+G PS TYT+LI + ++KAF ++ M G P+V+T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 458 YGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMN 517
Y VLI GLC G ++EA+ + M + ++ P+ + YN +I GYCK+G A LL M
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 518 EKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
++ PN+ +++ + LC+ GK +A LL +ML GL P + YN+L
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 228/541 (42%), Gaps = 77/541 (14%)
Query: 27 KAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPR 86
KAF+LF+ +G + + ++++ L A + K++ RI S T
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE---ANGVCRKMVKDRIFPSVITYN 375
Query: 87 SLL---CHLTQLFPS----------SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQML 133
+L+ C ++ P+ + P R + +++ + +A+ +ML
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKP--NVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRC-KVELDVYSFGILIKGCCEAGDLN 192
D+G+ P ++N L+ + + + + S C +E D +F +I C+ G +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
A L + G S + V T+LIDG CK G A + + ++ ++ T H+ V++
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
L K K+ K+ G+ PS+ TY L+ G ++ F++ + M+
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372
NV Y +I GLC+ RV+EAE+LL M+ +G+SPN +TY ++ G+ + G+ D+A
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 373 FNQLKSNGQSPSVVTYNVLIRAF------------------------------------- 395
+ G + Y+ L++ F
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733
Query: 396 ----------------SKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
K G + ++DLV+ + ERG+ E I+++S+ K
Sbjct: 734 LGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKC 792
Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
E+ +L+ KSGF P ++ ++I GL +G+ + A +L + L N VV +
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL----LTSNGVVEKSGVLT 848
Query: 500 Y 500
Y
Sbjct: 849 Y 849
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 223/458 (48%), Gaps = 34/458 (7%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I+ K SD+A +H+MLD G+ P T+NS+
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI--------------------- 237
Query: 169 CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIER 228
I C+A ++KA EVLN + + G P+ + Y S++ G C +G +
Sbjct: 238 -------------IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 229 AKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIH 288
A +K+ G+ TY++L+ L KNG + + ++ M G+ P + TY L+
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 289 EYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISP 348
Y +G + E L D M + + ++ LIC K+ +V +A + +M+ G++P
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 404
Query: 349 NVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLV 408
N +TY +I C +G + A F Q+ G SP + YN LI + A +L+
Sbjct: 405 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Query: 409 REMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMK 468
EM +RGI + + + +IDS + + ++ +++ LM + G P+V TY LI+G C+
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 469 GNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASY 528
G M EA KL + M L+PN V Y+ +I GYCK AL L EM G+ P+I +Y
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 529 SSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ + L Q + A+ L ++ + G + +S YNI+
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 39/436 (8%)
Query: 170 KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERA 229
+V D+ ++GILI CC AG L+ F L + + GF + + +T L+ G C + A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 230 -KMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLN---GVSPSLYTYNC 285
++ R++ ELG + +Y +L+ GL ++ E M + G P + +Y
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG 345
+I+ + EG + + + EM R + +VVTYN++I LCK + +A +L+ M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
+ P+ +TYN ++ G+C +G+ +A +++S+G P VVTY++L+ K G A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 406 DLVREMEERGITPSEVTY-----------------------------------TILIDSF 430
+ M +RG+ P TY +ILI ++
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
+ +++A ++S M++ G +P+ TYG +I LC G +++A F M + L P +
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
+VYN +I G C RA L+ EM ++G+ N ++S I C++G+ E+E L
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 551 MLKLGLKPSVSLYNIL 566
M+++G+KP+V YN L
Sbjct: 502 MVRIGVKPNVITYNTL 517
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 1/461 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCS-FDKGWLFFSEN 167
Y SI+ + S +A+ + +M GV P T++ L+ ++ K+ + +F S
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ ++ ++ ++G L++G G L + +L+ + G P+ +++ LI K G ++
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
+A ++F K+ + GL TY +I L K+G +D ++E+M G+SP YN LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H C K +L EM R + N + +N++I CKE RV E+E+L + M G+
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
PNVITYN LI+G+C AG+ D+A +L + + S G P+ VTY+ LI + K + A L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
+EME G++P +TY I++ ++ A E+Y + +SG ++ TY +++HGLC
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
+A ++F ++ L+ +N+MI K G + A L + GLVPN +
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYR 568
Y + G E + L M G + N + R
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 216/472 (45%), Gaps = 3/472 (0%)
Query: 81 SSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPR 140
SS P+ + L ++ P + Y ++D K+ +A F M G++P
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVT--YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Query: 141 SNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLN 199
T+ +LL + K + L R + D Y F ILI + G +++A V +
Sbjct: 336 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFS 395
Query: 200 QLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNG 259
++ + G +PN V Y ++I CK+G +E A + F ++ + GL Y LI GL
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455
Query: 260 LQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYN 319
+ E +M G+ + +N +I +C EG+V E KLF+ M V NV+TYN
Sbjct: 456 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 320 TLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSN 379
TLI G C ++ EA +LL M G+ PN +TY+ LI+G+C + A LF +++S+
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 380 GQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA 439
G SP ++TYN++++ + + A +L + E G TY I++ ++ + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 440 FEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFG 499
+M+ + + T+ ++I L G EA LF + L PN Y +M
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695
Query: 500 YCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551
+G +L M + G + + + L Q G+ A L+ +
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 2/380 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I KS + A+ YF QM+D G+ P + +NSL+ + +++ E
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ + L+ F +I C+ G + ++ ++ + +G PNV+ Y +LI+G C G ++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A L + +GL TY+ LI G K +D +++M+ +GVSP + TYN ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+ + +L+ + + TYN ++ GLCK +A ++ + + +
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
T+N +ID G D+A LF SNG P+ TY ++ G + L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
ME+ G T ++ ++ ++ +A S++ + FS + T + I L
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767
Query: 468 KGNMKEASKLFNSMWETKLE 487
G +E + +++ +E
Sbjct: 768 GGKYQEYYRFLPEKYKSFIE 787
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVR--EMEERG---ITPSEV 421
+ A +F++L G+ S+ N RA + A+ + R M G +TP
Sbjct: 32 EDARHVFDELLRRGRGASIYGLN---RALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL-FNS 480
TY ILI R+ ++ F + K GF D + L+ GLC +A +
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK---GLVPNIASYSSTIGVLCQ 537
M E PN YN+++ G C E S AL LL M + G P++ SY++ I +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+G +A ++ML G+ P V YN + A
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 272/600 (45%), Gaps = 83/600 (13%)
Query: 40 LQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFTPRSLLCHLTQLFPSS 99
+HT S+S ++ +L+ S + AQ+ +L++I S + ++ L F
Sbjct: 109 FKHTSLSLSAMIHILVR---SGRLSDAQSCLLRMIR----RSGVSRLEIVNSLDSTF--- 158
Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
SN + +++ +I ++++R +A F + G + N+L+ +++ +
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 160 GWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNK------------------------- 193
W + E +R V ++VY+ I++ C+ G + K
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 194 ----------AFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
AFE++N + GFSP V Y ++I+G CK+G ERAK +F ++ GL
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP---------SLYT------------ 282
TY L+ K G + + + M+ V P SL+T
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 283 --------------YNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
Y LI YC +G +S L +EM + A +VVTYNT++ GLCK
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
+ EA++L ++M + P+ T LIDG C G A LF ++K VVTY
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
N L+ F K G+ A ++ +M + I P+ ++Y+IL+++ + +AF ++ M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
P V +I G C GN + M P+ + YN +I+G+ +E N +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 509 ALRLLGEMNEK--GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A L+ +M E+ GLVP++ +Y+S + C+ + EAEV+L +M++ G+ P S Y +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 3/419 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I+ K ++A F +ML SG+ P S T+ SLL+ K + FS+ R
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ V D+ F ++ +G+L+KA N ++E G P+ VIYT LI G C+ G I
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A L ++ + G TY ++ GL K + + + + +M + P YT LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
+C G + +LF +M+ + + +VVTYNTL+ G K + A+ + M I
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P I+Y+ L++ C G +AFR+++++ S P+V+ N +I+ + ++GN+
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ--KSGFSPDVYTYGVLIHGL 465
+ +M G P ++Y LI FVR ++M KAF + M+ + G PDV+TY ++HG
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
C + MKEA + M E + P+ Y MI G+ + N A R+ EM ++G P+
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 205/392 (52%)
Query: 178 FGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIG 237
F +LI+ +A L +A E L GF+ ++ +LI + G +E A ++++I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 238 ELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVS 297
G+ +T +++ L K+G + F ++Q GV P + TYN LI Y ++G +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 298 EGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLI 357
E F+L + M + + V TYNT+I GLCK + + A+ + +M +G+SP+ TY L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 358 DGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGIT 417
C G+ + ++F+ ++S P +V ++ ++ F+++GN A ++E G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 418 PSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKL 477
P V YTILI + R + A + + M + G + DV TY ++HGLC + + EA KL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 478 FNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
FN M E L P+ ++I G+CK GN A+ L +M EK + ++ +Y++ + +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 538 DGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
G A+ + M+ + P+ Y+IL A
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 192/389 (49%)
Query: 181 LIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELG 240
LI G + A+ V ++ G NV +++ CK+G +E+ ++ E G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 241 LVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGF 300
+ TY LI GL ++ FE M G SP +YTYN +I+ C GK
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 301 KLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGF 360
++F EM ++ + TY +L+ CK+ V E E++ M+ + P+++ ++ ++ F
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 361 CDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSE 420
+G DKA FN +K G P V Y +LI+ + + G +A +L EM ++G
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 421 VTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNS 480
VTY ++ + + +A ++++ M + PD YT +LI G C GN++ A +LF
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 481 MWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGK 540
M E ++ + V YN ++ G+ K G+ A + +M K ++P SYS + LC G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 541 WPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
EA + ++M+ +KP+V + N + +
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKG 594
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 231/468 (49%), Gaps = 7/468 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQML-DSGVRPRSNTFNSLLIFVIKSCSFD---KGWLFF 164
Y +ID LK + A+ + ++L DS V P T N ++ + K D K W
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
+N + E D+Y++ LI G C+AG+++KA V N+L+E S +VV Y +++ G C+ G
Sbjct: 282 KQN--EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
I+ + L+R I E +Y +LI GL +NG + + M G + TY
Sbjct: 340 KIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
IH C G V++ + E+ +V Y ++I LCK+ R++EA L+ +M
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
G+ N N LI G +A ++ NG P+VV+YN+LI KAG A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
S V+EM E G P TY+IL+ R ++ A E++ +SG DV + +LIHG
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
LC G + +A + +M N V YN ++ G+ K G+S RA + G M + GL P+
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRAKNN 572
I SY++ + LC A + G+ P+V +NIL RA N
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/565 (28%), Positives = 275/565 (48%), Gaps = 35/565 (6%)
Query: 25 PLKAFSLFNWASRQ-GLQHTPQSISIILRLLL-SKMSSHSHAAAQTL-----------IL 71
P AF+LF+ A+R G H+ ILR L ++M +H + + L
Sbjct: 23 PRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVAL 82
Query: 72 KIISGRITSSSFTPRSL--LCHLTQLFPSSSNPVTKSRLYESIIDAHLKSR--LSDQALF 127
+I +S ++L + ++F P +S Y ++++A ++++ + ++LF
Sbjct: 83 SVIK-TYGKNSMPDQALDVFKRMREIF--GCEPAIRS--YNTLLNAFVEAKQWVKVESLF 137
Query: 128 YFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-----WLFFSENRCKVELDVYSFGILI 182
+ + +GV P T+N L+ K F+K W++ + + DV+S+ +I
Sbjct: 138 AYFET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW----KEGFKPDVFSYSTVI 191
Query: 183 KGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV 242
+AG L+ A E+ +++ E G +P+V Y LIDG K D + A L+ ++ E V
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 243 -ATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
T+ ++I GL K G D + +E+M+ N LYTY+ LIH C+ G V +
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
+F+E+ R+ + +VVTYNT++ G C+ +++E+ L M+ S N+++YN LI G
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLL 370
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
+ G+ D+A ++ + + G + TY + I G A +++E+E G
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSM 481
Y +ID + +E+A + M K G + + LI GL + EAS M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 482 WETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKW 541
+ P V YN++I G CK G A + EM E G P++ +YS + LC+D K
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 542 PEAEVLLNQMLKLGLKPSVSLYNIL 566
A L +Q L+ GL+ V ++NIL
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNIL 575
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 439 AFEMY-SLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMI 497
AF ++ S + G++ Y ++ L + S++ + + + ++ V +I
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 498 FGYCKEGNSYRALRLLGEMNEK-GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGL 556
Y K +AL + M E G P I SY++ + + +W + E L G+
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 557 KPSVSLYNILYR 568
P++ YN+L +
Sbjct: 146 APNLQTYNVLIK 157
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 243/527 (46%), Gaps = 71/527 (13%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
L+ + I+A K ++A+ F +M ++GV P TFN+++ + +D+ ++F +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 168 RCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID-------- 218
+ +E + ++ IL+KG A + A+ VL ++ + GF PNV++Y +LID
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 219 ---------------------------GCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251
G CKNG + A+ L +++ +G Q ++T +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454
Query: 252 IC-----------------------------------GLFKNGLQKDGFEFYEKMQLNGV 276
IC GL K+G E + + G
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514
Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
T N L+H C GK+ E F++ E+ R + V+YNTLI G C + ++ EA
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574
Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
LD+M G+ P+ TY+ LI G + + ++A + ++ K NG P V TY+V+I
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Query: 397 KAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVY 456
KA ++ + EM + + P+ V Y LI ++ RS + A E+ M+ G SP+
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 457 TYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEM 516
TY LI G+ + ++EA LF M LEPN Y +I GY K G + LL EM
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754
Query: 517 NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
+ K + PN +Y+ IG +DG EA LLN+M + G+ P Y
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 220/471 (46%), Gaps = 43/471 (9%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW----LFF 164
Y ++ +++ A F +M G P +N+L+ I++ S +K L
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 165 SENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGF------------------ 206
S+ + L ++ LIKG C+ G + A +L ++ +GF
Sbjct: 406 SKG---LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 462
Query: 207 -----------------SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYT 249
SP + T+LI G CK+G +A L+ + G V T
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
L+ GL + G + F +++ G +YN LI C + K+ E F DEM R
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
+ + TY+ LICGL +V+EA + D K G+ P+V TY+ +IDG C A T++
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
F+++ S P+ V YN LIRA+ ++G MA +L +M+ +GI+P+ TYT LI
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPN 489
+E+A ++ M+ G P+V+ Y LI G G M + L M + PN
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 490 DVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI-GVLCQDG 539
+ Y +MI GY ++GN A RLL EM EKG+VP+ +Y I G L Q G
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 813
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 167/624 (26%), Positives = 274/624 (43%), Gaps = 82/624 (13%)
Query: 21 AKLPPLKAFSLFNWASRQGLQHTP-QSISIILRLLLSKMSSHSHAAAQTLILKIISGRIT 79
+K+ P A F AS +S +++ LLL ++ +AA+ +++++I+G +
Sbjct: 115 SKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLD---ANLLSAARVVLIRLINGNVP 171
Query: 80 SSSFTPRSLLCHLTQLFPSSS---NPVTKSRLYESIIDAHLKSRLSDQ---ALFYFHQML 133
R + S S + + ++ + +I+ + D AL F +
Sbjct: 172 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 231
Query: 134 DSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLN 192
+ G+ P T N LL ++++ F K F + CK V DVY F I C+ G +
Sbjct: 232 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 290
Query: 193 KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252
+A ++ +++EE G +PNVV + ++IDG G + A M K+ E G+ T TY++L+
Sbjct: 291 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350
Query: 253 CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312
GL + D + ++M G P++ YN LI + G +++ ++ D M + ++
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 313 CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAG--------------------------- 345
TYNTLI G CK + AERLL +M G
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 346 --------ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSK 397
+SP LI G C G+ KA L+ Q + G T N L+ +
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 398 AGNSKMASDLVRE-----------------------------------MEERGITPSEVT 422
AG A + +E M +RG+ P T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 423 YTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMW 482
Y+ILI + +E+A + + +++G PDVYTY V+I G C +E + F+ M
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 483 ETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWP 542
++PN VVYN +I YC+ G AL L +M KG+ PN A+Y+S I + +
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 543 EAEVLLNQMLKLGLKPSVSLYNIL 566
EA++L +M GL+P+V Y L
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTAL 734
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 180/355 (50%), Gaps = 1/355 (0%)
Query: 123 DQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGW-LFFSENRCKVELDVYSFGIL 181
D AL + +ML + P +L+ + K K L+F +D + L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 182 IKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGL 241
+ G CEAG L++AF + ++ G + V Y +LI GCC ++ A M ++ + GL
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 242 VATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFK 301
+TY++LICGLF ++ +F++ + NG+ P +YTY+ +I C + EG +
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 302 LFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFC 361
FDEM + V N V YN LI C+ R+ A L + MK GISPN TY LI G
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 362 DAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEV 421
++A LF +++ G P+V Y LI + K G L+REM + + P+++
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764
Query: 422 TYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASK 476
TYT++I + R ++ +A + + M++ G PD TY I+G +G + EA K
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 191/422 (45%), Gaps = 9/422 (2%)
Query: 106 SRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFS 165
S Y ++I + K+ +D A +ML G +F S++ + FD F
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 166 ENRCKVELDVYSFG-----ILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGC 220
E + L S G LI G C+ G +KA E+ Q GF + +L+ G
Sbjct: 473 E----MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 221 CKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSL 280
C+ G ++ A + ++I G V + +Y LI G + F F ++M G+ P
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 281 YTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQ 340
YTY+ LI N KV E + +D+ + + +V TY+ +I G CK R +E + D+
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 341 MKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGN 400
M + PN + YN LI +C +G A L +K G SP+ TY LI+ S
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 401 SKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGV 460
+ A L EM G+ P+ YT LID + + M K + M P+ TY V
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 461 LIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKG 520
+I G GN+ EAS+L N M E + P+ + Y I+GY K+G A + E N
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 828
Query: 521 LV 522
++
Sbjct: 829 II 830
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 37/224 (16%)
Query: 99 SSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFD 158
S N + +Y +I A+ +S AL M G+ P S T+ S
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS------------ 698
Query: 159 KGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLID 218
LIKG + +A + ++ G PNV YT+LID
Sbjct: 699 ----------------------LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 219 GCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSP 278
G K G + + + L R++ + + TYTV+I G ++G + +M+ G+ P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796
Query: 279 SLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLI 322
TY I+ Y +G V E FK DE + A + +N LI
Sbjct: 797 DSITYKEFIYGYLKQGGVLEAFKGSDEENY---AAIIEGWNKLI 837
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 229/441 (51%), Gaps = 2/441 (0%)
Query: 120 RLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG-WLFFSENRCKVELDVYSF 178
+L D +FH M+ P F+ LL + K +D +L+ + ++ +
Sbjct: 61 KLDDSLDLFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 179 GILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGE 238
IL+ C L+ A L ++ ++G P++V + SL++G C+ + A +F ++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
+G Y +I GL K+ + + +M+ +G+ P + TYN LI C+ G+ S+
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
++ M RE+ +V T+N LI KE RV EAE ++M + P+++TY+ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
G C D+A +F + S G P VVTY++LI + K+ + L EM +RG+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
+ VTYTILI + R+ + A E++ M G P++ TY VL+HGLC G +++A +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
M + ++ + V YN++I G CK G A + +N +GL+P+I +Y++ + L +
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 539 GKWPEAEVLLNQMLKLGLKPS 559
G EA+ L +M + G+ P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 224/440 (50%), Gaps = 8/440 (1%)
Query: 87 SLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNS 146
L H+ Q P+ + ++ A K + D ++ + QM G+ P + +
Sbjct: 67 DLFFHMVQ-----CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCN 120
Query: 147 LLIFVIKSCSFDKGWLFFSENRCKV--ELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEM 204
+L+ CS L F K+ E + +FG L+ G C + A + +Q+ M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 205 GFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDG 264
G+ PNVVIY ++IDG CK+ ++ A L ++ + G+ TY LI GL +G D
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 265 FEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICG 324
M + P ++T+N LI EG+VSE + ++EM R + ++VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 325 LCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPS 384
LC R+ EAE + M G P+V+TY+ LI+G+C + + + +LF ++ G +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 385 VVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYS 444
VTY +LI+ + +AG +A ++ R M G+ P+ +TY +L+ + +EKA + +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 445 LMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEG 504
MQK+G D+ TY ++I G+C G + +A ++ S+ L P+ Y M+ G K+G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 505 NSYRALRLLGEMNEKGLVPN 524
A L +M E G++PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 179/362 (49%)
Query: 208 PNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEF 267
P++ ++ L+ K + L+ ++ LG+ T +L+ + F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 268 YEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCK 327
KM G PS+ T+ L++ +C +V + +FD+M NVV YNT+I GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 328 EMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVT 387
+V A LL++M+ GI P+V+TYN LI G C +G A R+ + + P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 388 YNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQ 447
+N LI A K G A + EM R + P VTY++LI +++A EM+ M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 448 KSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSY 507
G PDV TY +LI+G C ++ KLF M + + N V Y ++I GYC+ G
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 508 RALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILY 567
A + M G+ PNI +Y+ + LC +GK +A V+L M K G+ + YNI+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 568 RA 569
R
Sbjct: 439 RG 440
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 189/367 (51%), Gaps = 1/367 (0%)
Query: 125 ALFYFHQMLDSGVRPRSNTFNSLLI-FVIKSCSFDKGWLFFSENRCKVELDVYSFGILIK 183
AL + +M+ G P TF SLL F +D ++F + +V + +I
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 184 GCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVA 243
G C++ ++ A ++LN++E+ G P+VV Y SLI G C +G A + + + +
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 244 TQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLF 303
T+ LI K G + EFYE+M + P + TY+ LI+ C ++ E ++F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 304 DEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDA 363
M + +VVTY+ LI G CK +V+ +L +M G+ N +TY LI G+C A
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 364 GETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTY 423
G+ + A +F ++ G P+++TYNVL+ G + A ++ +M++ G+ VTY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 424 TILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWE 483
I+I ++ ++ A+++Y + G PD++TY ++ GL KG +EA LF M E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 484 TKLEPND 490
+ PN+
Sbjct: 495 DGILPNE 501
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
K+ + LF M ++ ++ L+ + K + L +QM+M GI N+ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
L++ FC + A ++ G PS+VT+ L+ F + A + +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P+ V Y +ID +S ++ A ++ + M+K G PDV TY LI GLC G +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
+++ + M + ++ P+ +N +I KEG A EM + L P+I +YS I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
LC + EAE + M+ G P V Y+IL
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%)
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
M++ ++ L M P++ +++L+ + D L+ Q++ G ++ T
Sbjct: 60 MKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
N+L+ F + +A + +M + G PS VT+ L++ F R D + A M+ M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
G+ P+V Y +I GLC + A L N M + + P+ V YN +I G C G
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 509 ALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
A R++ M ++ + P++ ++++ I ++G+ EAE +M++ L P + Y++L
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%)
Query: 367 DKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTIL 426
D + LF + PS+ ++ L+ A SK + L +M+ GI + T IL
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 427 IDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKL 486
++ F R + A M K G P + T+G L++G C + +A +F+ M
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 487 EPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEV 546
+PN V+YN +I G CK AL LL M + G+ P++ +Y+S I LC G+W +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 547 LLNQMLKLGLKPSVSLYNILYRA 569
+++ M K + P V +N L A
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDA 265
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 253/530 (47%), Gaps = 61/530 (11%)
Query: 86 RSLLCHLTQLFPSSS--NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNT 143
R L L++L SS+ +P T ++ +I+ S +L + ++ G P ++
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLIN----SNCGILSLKFLAYLVSRGYTPHRSS 58
Query: 144 FNSLLIFVIKSCSFDKGWLFFSEN------RCKVELDVYSFGILIKGCCEAGDLNKAFEV 197
FNS++ FV K G + F+E+ R E DV S+ LI G C GD+ A V
Sbjct: 59 FNSVVSFVCK-----LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 198 LNQLE-EMGF--SPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLV-----ATQHTYT 249
L L GF P++V + SL +G + KML +G++ TY+
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNG------FSKMKMLDEVFVYMGVMLKCCSPNVVTYS 167
Query: 250 VLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHR 309
I K+G + + + M+ + +SP++ T+ CLI YC G + L+ EMR
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 310 EVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKA 369
++ NVVTY LI G CK+ +Q AE + +M + PN + Y +IDGF G++D A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 370 FRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDS 429
+ ++ + G + Y V+I G K A+++V +ME+ + P V +T ++++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 430 FVRSDDMEKAFEMYSLMQKSGFSPDVYT------------------------------YG 459
+ +S M+ A MY + + GF PDV Y
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYT 407
Query: 460 VLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEK 519
VLI LC +G+ E +LF+ + E L P+ +Y I G CK+GN A +L M ++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 520 GLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
GL+ ++ +Y++ I L G EA + ++ML G+ P +++++L RA
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 207/419 (49%), Gaps = 7/419 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWL-FFSEN 167
+ S+ + K ++ D+ Y ML P T+++ + KS F S
Sbjct: 132 FNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190
Query: 168 RCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
R + +V +F LI G C+AGDL A + ++ + S NVV YT+LIDG CK G+++
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
RA+ ++ ++ E + YT +I G F+ G + +F KM G+ + Y +I
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C GK+ E ++ ++M ++ ++V + T++ K R++ A + ++ G
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P+V+ + +IDG G+ +A F K+N V Y VLI A K G+ L
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERL 425
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
++ E G+ P + YT I + ++ AF++ + M + G D+ Y LI+GL
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
KG M EA ++F+ M + + P+ V++++I Y KEGN A LL +M +GLV ++
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 37/273 (13%)
Query: 331 VQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNV 390
V+EA + L +++ + P+ T NK I ++ + + L S G +P ++N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 391 LIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKA-FEMYSLMQKS 449
++ K G K A D+V M G P ++Y LID R+ D+ A + SL
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 450 GF------------------------------------SPDVYTYGVLIHGLCMKGNMKE 473
GF SP+V TY I C G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 474 ASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIG 533
A K F+SM L PN V + +I GYCK G+ A+ L EM + N+ +Y++ I
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 534 VLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
C+ G+ AE + ++M++ ++P+ +Y +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 100 SNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDK 159
S+ V ++ ++++A+ KS A+ +H++++ G P ++++ + K+ +
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 160 GWLFFSENR-------------CK----VEL--------------DVYSFGILIKGCCEA 188
++F + CK +E+ D + + I G C+
Sbjct: 392 AIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 189 GDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
G+L AF++ ++ + G +++ YT+LI G G + A+ +F ++ G+ +
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 249 TVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
+LI K G + MQ G+ ++ +C
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 227/456 (49%), Gaps = 1/456 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y I+ L + + AL F +M+ S P F LL + K +D F + +
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 169 C-KVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+ + + I++ C + +A L ++ ++GF P++V +TSL++G C IE
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A LF +I +G TYT LI L KN E + +M NG P++ TYN L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
C G+ + L +M R + NV+T+ LI K ++ EA+ L + M +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P+V TY LI+G C G D+A ++F ++ NG P+ V Y LI F K+ + +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 408 VREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCM 467
EM ++G+ + +TYT+LI + + A E+++ M PD+ TY VL+ GLC
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 468 KGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIAS 527
G +++A +F M + +++ N V Y ++I G CK G A L + KG+ PN+ +
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 528 YSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLY 563
Y++ I C+ G EA+ L +M + G P+ S+Y
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 176/328 (53%), Gaps = 13/328 (3%)
Query: 239 LGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSE 298
L ++A + Y V+I +E+MQ+ G+ P L T N ++H C +
Sbjct: 90 LSVIAKMNRYDVVI-------------SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136
Query: 299 GFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLID 358
+M ++VT+ +L+ G C R+++A L DQ+ G PNV+TY LI
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 359 GFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITP 418
C + A LFNQ+ +NG P+VVTYN L+ + G A+ L+R+M +R I P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 419 SEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLF 478
+ +T+T LID+FV+ + +A E+Y++M + PDV+TYG LI+GLCM G + EA ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 479 NSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQD 538
M PN+V+Y +I G+CK +++ EM++KG+V N +Y+ I C
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 539 GKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
G+ A+ + NQM P + YN+L
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%)
Query: 295 KVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYN 354
+ ++ LF M H +++ + L+ + K R L +QM++ GI P + T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 355 KLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
++ C + + +A ++ G P +VT+ L+ + + A L ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
G P+ VTYT LI ++ + A E+++ M +G P+V TY L+ GLC G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
+ L M + ++EPN + + +I + K G A L M + + P++ +Y S I
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
LC G EA + M + G P+ +Y L
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 20/277 (7%)
Query: 294 GKVSEGFKLFDEMRHREVACNVVTYNTL-ICGLCKEMRVQEAERLLDQMKMAGISPNVIT 352
+ +GF L RHR N T +L +CG C +R +
Sbjct: 10 ASIVKGFHLHSH-RHRLQISNPRTAASLSLCGFCFWIRAFS------------------S 50
Query: 353 YNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREME 412
Y K++ + + A LF ++ + PS++ + L+ +K + L +M+
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 413 ERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMK 472
GI P T I++ S +A M K GF PD+ T+ L++G C ++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 473 EASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTI 532
+A LF+ + +PN V Y +I CK + A+ L +M G PN+ +Y++ +
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 533 GVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
LC+ G+W +A LL M+K ++P+V + L A
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 98 SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
S V + Y +I + D A F+QM P T+N LL + +
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 158 DKGWLFFSENRCK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
+K + F R + +++++ ++ I+I+G C+ G + AF++ L G PNV+ YT++
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTY 248
I G C+ G I A LF+K+ E G + + Y
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 234/463 (50%), Gaps = 7/463 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
+ +++ K+ + + A +M D G P + TF S+L S + L E
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF-SILFDGYSSNEKAEAALGVYETA 345
Query: 169 CK--VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDI 226
V+++ Y+ IL+ C+ G + KA E+L + G PN VIY ++IDG C+ GD+
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 227 ERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCL 286
A+M + + G+ Y LI + G ++ + KM+L GVSPS+ TYN L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 287 IHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGI 346
I Y + + + F + EM NVV+Y TLI LCK ++ EA+ + M+ G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 347 SPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASD 406
SP V YN LIDG C G+ + AFR ++ G ++VTYN LI S G A D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 407 LVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLC 466
L+ E+ +G+ P TY LI + + ++++ +Y M++SG P + TY +LI LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLC 644
Query: 467 MKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIA 526
K ++ +LF M L+P+ +VYN ++ Y G+ +A L +M EK + +
Sbjct: 645 TKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 527 SYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
+Y+S I + GK E L+++M ++P YNI+ +
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 268/556 (48%), Gaps = 21/556 (3%)
Query: 25 PLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKIISGRITSSSFT 84
P + FS F+ +S L+H + + + L SKM S A L + + I SS +
Sbjct: 92 PKELFSAFSLSS-PSLKHDFSYLLLSVLLNESKMISE----AADLFFALRNEGIYPSSDS 146
Query: 85 PRSLLCHLTQ-------------LFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQ 131
LL HL + + S P +Y I A +K + L F++
Sbjct: 147 LTLLLDHLVKTKQFRVTINVFLNILESDFRP--SKFMYGKAIQAAVKLSDVGKGLELFNR 204
Query: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVEL-DVYSFGILIKGCCEAGD 190
M + P +N L+ + K + F E + L + ++ LI G C+AG+
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 191 LNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTV 250
K+F+V +++ P+++ + +L+ G K G +E A+ + +++ +LG V T+++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 251 LICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHRE 310
L G N + YE +GV + YT + L++ C EGK+ + ++ +
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 311 VACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAF 370
+ N V YNT+I G C++ + A ++ M+ G+ P+ + YN LI FC+ GE + A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 371 RLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSF 430
+ N++K G SPSV TYN+LI + + D+++EME+ G P+ V+Y LI+
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 431 VRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPND 490
+ + +A + M+ G SP V Y +LI G C KG +++A + M + +E N
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 491 VVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQ 550
V YN +I G G A LL E++ KGL P++ +Y+S I G L +
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 551 MLKLGLKPSVSLYNIL 566
M + G+KP++ Y++L
Sbjct: 625 MKRSGIKPTLKTYHLL 640
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 223/460 (48%), Gaps = 9/460 (1%)
Query: 108 LYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSEN 167
+Y +ID K + + A F +ML + P T+N+L+ K+ + +K F
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS--FKVRE 273
Query: 168 RCK---VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNG 224
R K +E + +F L+KG +AG + A VL +++++GF P+ ++ L DG N
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 225 DIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYN 284
E A ++ + G+ +T ++L+ L K G + E + G+ P+ YN
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 285 CLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMA 344
+I YC +G + + M + + + + YN LI C+ ++ AE+ +++MK+
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 345 GISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMA 404
G+SP+V TYN LI G+ E DK F + +++ NG P+VV+Y LI K A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 405 SDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHG 464
+ R+ME+RG++P Y +LID +E AF M K G ++ TY LI G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 465 LCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPN 524
L M G + EA L + L+P+ YN +I GY GN R + L EM G+ P
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 525 IASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYN 564
+ +Y I LC E L +M LKP + +YN
Sbjct: 634 LKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYN 669
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 141/307 (45%), Gaps = 5/307 (1%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I+ K +A M D GV P+ +N L+ + + F E
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 169 CK-VELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
K +EL++ ++ LI G G L++A ++L ++ G P+V Y SLI G G+++
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
R L+ ++ G+ T TY +LI K G++ F E + P L YN ++
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM----SLKPDLLVYNGVL 672
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGIS 347
H Y G + + F L +M + + + TYN+LI G K ++ E L+D+M +
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 348 PNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDL 407
P TYN ++ G C+ + A+ + +++ G V N L+ + SK A +
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIV 792
Query: 408 VREMEER 414
+ EM R
Sbjct: 793 ISEMNGR 799
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 368 KAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILI 427
+A LF L++ G PS + +L+ K ++ ++ + E PS+ Y I
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186
Query: 428 DSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLE 487
+ V+ D+ K E+++ M+ P V+ Y VLI GLC M +A +LF+ M +L
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 488 PNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVL 547
P+ + YN +I GYCK GN ++ ++ M + P++ ++++ + L + G +AE +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 548 LNQMLKLGLKPSVSLYNILY 567
L +M LG P ++IL+
Sbjct: 307 LKEMKDLGFVPDAFTFSILF 326
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 404 ASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIH 463
A+DL + GI PS + T+L+D V++ ++ + +S F P + YG I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 464 GLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVP 523
++ + +LFN M ++ P+ +YN++I G CK A +L EM + L+P
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 524 NIASYSSTIGVLCQDGKWPEAEVLLNQMLKLG-LKPSVSLYNILYRA 569
++ +Y++ I C+ G PE + + +K ++PS+ +N L +
Sbjct: 248 SLITYNTLIDGYCKAGN-PEKSFKVRERMKADHIEPSLITFNTLLKG 293
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 204/392 (52%), Gaps = 2/392 (0%)
Query: 177 SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKI 236
++GILI C+AG +++A L +++ MG ++V+YTSLI G C G+++R K LF ++
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 237 GELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKV 296
E G TY LI G K G K+ E +E M GV P++YTY LI C GK
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 297 SEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKL 356
E +L + M ++ N VTYN +I LCK+ V +A +++ MK P+ ITYN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 357 IDGFCDAGETDKAFRLFNQL--KSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEER 414
+ G C G+ D+A +L + S+ P V++YN LI K A D+ + E+
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 415 GITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEA 474
VT IL++S +++ D+ KA E++ + S + TY +I G C G + A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 475 SKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGV 534
L M ++L+P+ YN ++ CKEG+ +A RL EM P++ S++ I
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 535 LCQDGKWPEAEVLLNQMLKLGLKPSVSLYNIL 566
+ G AE LL M + GL P + Y+ L
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 3/457 (0%)
Query: 109 YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168
Y ++I + + ++AL ++M SG T+ L+ K+ D+ F E +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 169 -CKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIE 227
+E D+ + LI+G C+ G+L++ + +++ E G SP + Y +LI G CK G ++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 228 RAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLI 287
A +F + E G+ +TYT LI GL G K+ + M P+ TYN +I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 288 HEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAERLLDQM--KMAG 345
++ C +G V++ ++ + M+ R + +TYN L+ GLC + + EA +LL M +
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 346 ISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMAS 405
P+VI+YN LI G C +A +++ L + VT N+L+ + KAG+ A
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 406 DLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGL 465
+L +++ + I + TYT +ID F ++ + A + M+ S P V+ Y L+ L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 466 CMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNI 525
C +G++ +A +LF M P+ V +N+MI G K G+ A LL M+ GL P++
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 526 ASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSL 562
+YS I + G EA ++M+ G +P +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 235/481 (48%), Gaps = 55/481 (11%)
Query: 101 NPVTKSRLYESI--IDAHLKSRLSD------QALFYFHQMLDSGVRPRSNTFNSLLIFVI 152
NP S+L + + L+S D A+ F Q +DSG + N+L+ ++
Sbjct: 25 NPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLV 83
Query: 153 KSCSFDKGWLFFSENRCKVELDVY----SFGILIKGCCEAGDLNKAFEVLNQLEEMGFSP 208
+S + + L FS R +E D + S L++ + AF VL + + GF+
Sbjct: 84 RSRNHE---LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 209 NVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFY 268
NV + L+ G C+N + +A L R+
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE--------------------------------- 167
Query: 269 EKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKE 328
M+ N + P +++YN +I +C ++ + +L +EM+ + ++VT+ LI CK
Sbjct: 168 --MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 329 MRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTY 388
++ EA L +MK G+ +++ Y LI GFCD GE D+ LF+++ G SP +TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 389 NVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQK 448
N LIR F K G K AS++ M ERG+ P+ TYT LID ++A ++ +LM +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 449 SGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYR 508
P+ TY ++I+ LC G + +A ++ M + + P+++ YN+++ G C +G+
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 509 ALRLLGEM--NEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQML-KLGLKPSVSLYNI 565
A +LL M + P++ SY++ I LC++ + +A + + ++ KLG V+ NI
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT-TNI 464
Query: 566 L 566
L
Sbjct: 465 L 465
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 209/470 (44%), Gaps = 50/470 (10%)
Query: 112 IIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSE----- 166
+IDA K+ D+A+ + +M G+ + SL+ D+G F E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 167 -NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGD 225
+ C + ++ LI+G C+ G L +A E+ + E G PNV YT LIDG C G
Sbjct: 278 DSPCAI-----TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 226 IERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNC 285
+ A L + E TY ++I L K+GL D E E M+ P TYN
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 286 LIHEYCNEGKVSEGFKLFDEMRHRE--VACNVVTYNTLICGLCKEMRVQEAERLLD---- 339
L+ C +G + E KL M +V++YN LI GLCKE R+ +A + D
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 340 -------------------------------QMKMAGISPNVITYNKLIDGFCDAGETDK 368
Q+ + I N TY +IDGFC G +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
A L +++ + PSV YN L+ + K G+ A L EM+ P V++ I+ID
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
+++ D++ A + M ++G SPD++TY LI+ G + EA F+ M ++ EP
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 489 NDVVYNMMIFGYC-KEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQ 537
+ + + + YC +G + + L+ ++ +K +V + + + +C
Sbjct: 633 DAHICD-SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 168/331 (50%), Gaps = 10/331 (3%)
Query: 101 NPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKG 160
N VT Y II+ K L A+ M RP + T+N LL + D+
Sbjct: 351 NAVT----YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 161 ----WLFFSENRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
+L ++ + DV S+ LI G C+ L++A ++ + L E + + V L
Sbjct: 407 SKLLYLMLKDSS-YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICGLFKNGLQKDGFEFYEKMQLNGV 276
++ K GD+ +A L+++I + +V TYT +I G K G+ KM+++ +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 277 SPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACNVVTYNTLICGLCKEMRVQEAER 336
PS++ YNCL+ C EG + + ++LF+EM+ +VV++N +I G K ++ AE
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 337 LLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFNQLKSNGQSPSVVTYNVLIRAFS 396
LL M AG+SP++ TY+KLI+ F G D+A F+++ +G P + +++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 397 KAGNSKMASDLVREMEERGIT-PSEVTYTIL 426
G + ++LV+++ ++ I E+T T++
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 346 ISPNVITYNKLIDGFCDAG------------ETDKAFRLFNQLKSNGQSPSVVTYNVLIR 393
++P V Y+KL++ F + + A +F Q +G S + N++ +
Sbjct: 24 LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAK 81
Query: 394 AFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSDDMEKAFEMYSLMQKSGFSP 453
++ N ++A R+M E + V+ + L++ +V+ AF + +LM K GF+
Sbjct: 82 -LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 454 DVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYNMMIFGYCKEGNSYRALRLL 513
+VY + +L+ GLC +A L M L P+ YN +I G+C+ +AL L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 514 GEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKLGLKPSVSLYNILYRA 569
EM G ++ ++ I C+ GK EA L +M +GL+ + +Y L R
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%)
Query: 369 AFRLFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILID 428
AF + ++ + V+ + L+ + + + A ++ M +RG + + IL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 429 SFVRSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEP 488
R+ + KA + M+++ PDV++Y +I G C +++A +L N M +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 489 NDVVYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLL 548
+ V + ++I +CK G A+ L EM GL ++ Y+S I C G+ + L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 549 NQMLKLGLKPSVSLYNILYRA 569
+++L+ G P YN L R
Sbjct: 271 DEVLERGDSPCAITYNTLIRG 291
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 98 SSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSF 157
S S V S Y ++ID K+ + + A +M S ++P +N LL + K S
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 158 DKGWLFFSE-NRCKVELDVYSFGILIKGCCEAGDLNKAFEVLNQLEEMGFSPNVVIYTSL 216
D+ W F E R DV SF I+I G +AGD+ A +L + G SP++ Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 217 IDGCCKNGDIERAKMLFRKIGELGLVATQH 246
I+ K G ++ A F K+ + G H
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,659,714
Number of Sequences: 539616
Number of extensions: 8499138
Number of successful extensions: 33367
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 20620
Number of HSP's gapped (non-prelim): 3356
length of query: 574
length of database: 191,569,459
effective HSP length: 123
effective length of query: 451
effective length of database: 125,196,691
effective search space: 56463707641
effective search space used: 56463707641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)