Your job contains 1 sequence.
>044000
MLQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTA
CTSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQP
PPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFA
NKIKEAERVLDILVDDYSDYRRPKRVKSEGGDGNDDDSGSCSTTVESRLNLSDILSYAHR
ISYTTFAPPEFGAGQGPLRGALPPAPQEEQMRASQLYTFADLDVGLPKVVETKEKTIEAI
IEPPPLQPVDANPLKDLAGLLPPNITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAVPLP
PLDALPMPRIEEQQLRPVPPQGLHKPPEPIQVRHVELDILDQDDDSSDYSSEEGSSEDDG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044000
(420 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151266 - symbol:AT5G02850 species:3702 "Arabi... 918 2.0e-98 2
DICTYBASE|DDB_G0292608 - symbol:med4 "putative mediator c... 119 0.00012 1
>TAIR|locus:2151266 [details] [associations]
symbol:AT5G02850 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR019258 Pfam:PF10018 EMBL:CP002688 EMBL:AL162973
GO:GO:0016592 GO:GO:0001104 EMBL:BT008646 IPI:IPI00523563
PIR:T48306 RefSeq:NP_195905.1 UniGene:At.4977 IntAct:Q9LZ00
PRIDE:Q9LZ00 EnsemblPlants:AT5G02850.1 GeneID:831762
KEGG:ath:AT5G02850 TAIR:At5g02850 eggNOG:NOG248582
HOGENOM:HOG000243278 InParanoid:Q9LZ00 OMA:HQIVQSP PhylomeDB:Q9LZ00
ProtClustDB:CLSN2687524 Genevestigator:Q9LZ00 Uniprot:Q9LZ00
Length = 426
Score = 918 (328.2 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 190/315 (60%), Positives = 221/315 (70%)
Query: 89 KLFEVSPNRSLWISAFRGSLPTFLXXXXXXXXXXXXXXXXXTIKEIIACFTSLQTQLFEA 148
KLF+VSPNR++W+SAFRGSLP+FL + KEI++ F SLQTQLFEA
Sbjct: 99 KLFDVSPNRAIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEA 158
Query: 149 VAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDYSDYRRPKRVKX 208
V ELQEILDLQDAKQK+AREIK+KDS++LAFANK+K+AERVLD+LVDDYSDYR+PKR K
Sbjct: 159 VTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKI 218
Query: 209 XXXXXXXXX-XXXXXTTVESRLNLSDILSYAHRISYTTFAPPEFGAGQGPLRGALPPAPQ 267
TTV S+L L DIL+YAH+ISYTTFAPPEFGAGQ PLRGALPPAPQ
Sbjct: 219 EEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQ 278
Query: 268 EEQMRASQLYTFADLDVGLPKVVXXXXXXXXXXXXXXXLQPVDANPLKDLAGLLPPNITV 327
+EQMRASQLYTFADLD+GLPK V P +A + + LLPPNI V
Sbjct: 279 DEQMRASQLYTFADLDIGLPKTVENMEKKVEALIEPP--PPPEAMDISAIHNLLPPNIAV 336
Query: 328 PSGWKPGMPVELPKDFPLVPPPGWKXXXXXXXXXXXXXXXXRIEEQQ-LRPVPPQGLHKP 386
PSGWKPGMPVELP+D PL PPPGWK R E+ Q +RP QGLH+P
Sbjct: 337 PSGWKPGMPVELPRDLPL-PPPGWKPGDPVVLPPLESIAAPRAEDHQHMRP--SQGLHRP 393
Query: 387 PEPIQVRHVELDILD 401
P+ IQVR V+LDIL+
Sbjct: 394 PDVIQVRAVQLDILE 408
Score = 79 (32.9 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 16/16 (100%), Positives = 16/16 (100%)
Query: 1 MLQHQIVQSPARLGLT 16
MLQHQIVQSPARLGLT
Sbjct: 1 MLQHQIVQSPARLGLT 16
>DICTYBASE|DDB_G0292608 [details] [associations]
symbol:med4 "putative mediator complex subunit 4"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR019258 Pfam:PF10018 dictyBase:DDB_G0292608
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0006367
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG248582 KO:K15146
RefSeq:XP_629520.1 EnsemblProtists:DDB0266848 GeneID:8628772
KEGG:ddi:DDB_G0292608 OMA:ENELSQD Uniprot:Q54D00
Length = 343
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 151 ELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDI-LVDDYSDYRRPKR---- 205
+L++ +Q +I +EI+ KD I A +K+ E L+ L D +
Sbjct: 88 KLEKHQKIQKEITEIQKEIEEKDKLISTLALNLKDIESFLENELSQDNVNINNGNASDGI 147
Query: 206 VKXXXXXXXXXXXXXXXTTVESR-LNLSDILSYAHRISYTTFAPPEFG-AGQGPLRGAL- 262
V + +R ++ D++SYAH+IS TT AP FG PL
Sbjct: 148 VNEVLIDLKQPDDAASMDNIVNREVSPEDLISYAHKISGTTSAP--FGYQPNAPLASLFK 205
Query: 263 PPAPQEEQMRASQLYT 278
PPAPQ+E MR+S L+T
Sbjct: 206 PPAPQDEMMRSSVLFT 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 420 280 0.00082 115 3 11 22 0.37 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 599 (64 KB)
Total size of DFA: 182 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.68u 0.11s 22.79t Elapsed: 00:00:01
Total cpu time: 22.68u 0.11s 22.79t Elapsed: 00:00:01
Start: Sat May 11 03:59:39 2013 End: Sat May 11 03:59:40 2013