Query 044000
Match_columns 420
No_of_seqs 65 out of 67
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 18:10:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044000.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044000hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ykha1 a.252.1.2 (A:111-205) 75.4 12 0.00091 29.1 10.0 61 127-191 34-94 (95)
2 d1io1a_ e.32.1.1 (A:) Phase 1 74.8 2.7 0.0002 34.9 6.2 56 127-182 8-73 (395)
3 d1seta1 a.2.7.1 (A:1-110) Sery 67.4 22 0.0016 26.7 10.2 63 131-194 27-98 (110)
4 d2azeb1 e.63.1.2 (B:201-301) T 60.4 6.5 0.00048 30.8 5.3 32 156-187 4-35 (101)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 55.0 9.2 0.00067 29.1 5.3 36 158-193 6-41 (107)
6 d2piha1 a.281.1.1 (A:2-124) Un 54.0 39 0.0029 25.8 9.1 34 159-197 71-104 (123)
7 d1fxkc_ a.2.5.1 (C:) Prefoldin 50.4 28 0.002 26.6 7.6 19 128-146 83-101 (133)
8 d1noga_ a.25.2.2 (A:) Hypothet 49.1 63 0.0046 26.2 10.3 44 133-176 28-75 (149)
9 d1r8da_ a.6.1.3 (A:) Multidrug 45.8 14 0.001 27.5 4.9 14 130-143 61-74 (109)
10 d1vf7a_ f.46.1.1 (A:) Multidru 45.7 24 0.0018 27.9 6.8 60 133-192 50-109 (237)
11 d2azeb1 e.63.1.2 (B:201-301) T 42.7 20 0.0015 27.8 5.6 36 161-196 2-37 (101)
12 d1fxkc_ a.2.5.1 (C:) Prefoldin 39.9 47 0.0034 25.2 7.4 35 160-194 95-129 (133)
13 d1lrza1 a.2.7.4 (A:245-309) Me 39.6 62 0.0045 23.3 7.7 60 133-192 3-62 (65)
14 d1nlta1 b.4.1.1 (A:110-138,A:2 38.9 4.1 0.0003 29.3 0.7 31 325-357 35-65 (74)
15 d1xcca_ c.47.1.10 (A:) 1-Cys p 37.4 4.1 0.0003 35.2 0.6 15 347-361 173-187 (219)
16 d1rtya_ a.25.2.2 (A:) Putative 36.7 1E+02 0.0074 25.0 9.6 45 132-176 33-83 (161)
17 d1ivsa1 a.2.7.3 (A:797-862) Va 36.1 16 0.0012 25.6 3.7 25 159-183 3-27 (66)
18 d1prxa_ c.47.1.10 (A:) 1-Cys p 36.1 4.5 0.00032 34.8 0.6 15 347-361 173-187 (220)
19 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 35.5 86 0.0063 23.8 9.4 29 164-192 159-187 (196)
20 d1s35a2 a.7.1.1 (A:1169-1273) 35.0 69 0.005 22.5 8.8 67 124-190 28-102 (105)
21 d1q06a_ a.6.1.3 (A:) Transcrip 34.5 33 0.0024 26.0 5.6 16 128-143 60-75 (127)
22 d1fxka_ a.2.5.1 (A:) Prefoldin 33.1 89 0.0065 23.2 10.4 35 159-193 64-98 (107)
23 d2oeqa1 a.281.1.2 (A:3-115) Yh 30.1 41 0.003 25.5 5.4 62 131-197 36-98 (113)
24 d1nlwa_ a.38.1.1 (A:) Mad prot 29.8 80 0.0058 22.2 6.8 10 101-110 20-29 (79)
25 d2efla1 a.238.1.4 (A:1-288) Fo 29.2 1.3E+02 0.0095 23.9 10.1 71 131-201 124-201 (288)
26 d1nlwa_ a.38.1.1 (A:) Mad prot 28.7 63 0.0046 22.8 6.0 25 159-183 53-77 (79)
27 d2azea1 e.63.1.1 (A:199-346) T 28.1 69 0.005 26.6 6.9 41 152-196 1-41 (148)
28 d1k4ta1 a.2.8.1 (A:641-712) Eu 27.9 30 0.0022 25.9 4.1 31 161-191 3-33 (72)
29 d3bzka3 a.294.1.1 (A:1-324) Tr 27.2 28 0.0021 31.1 4.6 64 144-208 56-119 (324)
30 d1hcia4 a.7.1.1 (A:633-746) al 27.0 1E+02 0.0076 22.1 8.4 67 128-194 36-110 (114)
31 d1n8ja_ c.47.1.10 (A:) Alkyl h 26.1 14 0.0011 30.6 2.2 11 328-338 166-176 (186)
32 d1r8ea1 a.6.1.3 (A:3-120) Tran 25.0 1.1E+02 0.0077 22.6 7.0 7 132-138 65-71 (118)
33 d1nkpa_ a.38.1.1 (A:) Myc prot 24.8 1.1E+02 0.0077 22.0 6.8 7 103-109 27-33 (88)
34 d1u5pa1 a.7.1.1 (A:1662-1771) 24.5 1.1E+02 0.0079 21.4 8.9 69 125-193 31-107 (110)
35 d2etda1 a.29.9.1 (A:35-183) Hy 23.9 1.3E+02 0.0096 23.4 7.7 25 173-197 90-114 (149)
36 d1vp7a_ a.7.13.1 (A:) Exonucle 23.8 76 0.0056 22.8 5.6 53 127-196 11-63 (68)
37 d2iaza1 a.281.1.2 (A:1-111) Hy 23.6 1.3E+02 0.0098 22.2 7.5 35 159-198 66-100 (111)
38 d1s35a1 a.7.1.1 (A:1063-1168) 23.4 1.1E+02 0.008 21.1 10.7 33 161-193 73-105 (106)
39 d1ab4a_ e.11.1.1 (A:) DNA Gyra 22.9 63 0.0046 30.3 6.4 24 161-184 441-464 (493)
40 d2imla1 b.45.1.4 (A:1-189) Hyp 22.5 24 0.0017 29.8 2.9 26 69-94 125-150 (189)
41 d1quua1 a.7.1.1 (A:1-124) alph 21.6 47 0.0034 24.1 4.1 98 86-193 15-120 (124)
42 d1quua1 a.7.1.1 (A:1-124) alph 21.4 1.3E+02 0.0098 21.4 9.4 50 130-179 22-74 (124)
43 d2efka1 a.238.1.4 (A:10-288) C 20.4 1.9E+02 0.014 22.8 9.2 40 159-198 101-140 (279)
No 1
>d1ykha1 a.252.1.2 (A:111-205) RNA polymerase II mediator complex protein MED7 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.43 E-value=12 Score=29.15 Aligned_cols=61 Identities=10% Similarity=0.135 Sum_probs=50.6
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 044000 127 SPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLD 191 (420)
Q Consensus 127 ~~~s~keil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld 191 (420)
...++++|--+|.+.. -...+|+-||-++.-|.-+++.++.|-+.+.++.+.+++++..|.
T Consensus 34 ~~~kvedl~~LfiN~H----hllNeyRPhQAResLi~lme~Ql~~kr~~~~~i~~~~~~~~~~L~ 94 (95)
T d1ykha1 34 YERKVENIRTILVNIH----HLLNEYRPHQSRESLIMLLEEQLEYKRGEIREIEQVCKQVHDKLT 94 (95)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHhhHHHHHHHHHHHH----HHHHccCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456667666776655 456789999999999999999999999999999999999998774
No 2
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=74.81 E-value=2.7 Score=34.85 Aligned_cols=56 Identities=20% Similarity=0.203 Sum_probs=46.4
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHhhHHHHHHHHH
Q 044000 127 SPSTIKEIIACFTSLQTQLFEAVAELQEILDL----------QDAKQKIAREIKAKDSAILAFANK 182 (420)
Q Consensus 127 ~~~s~keil~lf~s~QtqL~eAV~ELQE~l~l----------Q~eIq~Lk~EIe~kD~~I~~lakk 182 (420)
+..++.+.++++..-+.-|-|...-||...+| ...++.|+.||+.+-+.|.++++.
T Consensus 8 a~~N~~d~~s~lqtae~al~~~~~iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~ia~~ 73 (395)
T d1io1a_ 8 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQ 73 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567788889988888899999999988888 778888999998888888777765
No 3
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=67.44 E-value=22 Score=26.74 Aligned_cols=63 Identities=17% Similarity=0.228 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Q 044000 131 IKEIIACFTSLQTQLFEAVAELQEILDL---------QDAKQKIAREIKAKDSAILAFANKIKEAERVLDILV 194 (420)
Q Consensus 131 ~keil~lf~s~QtqL~eAV~ELQE~l~l---------Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~V 194 (420)
+.+|+++ +..-+.|...+.+|+..... ...++.|.+++......|..+..+|++++..|..++
T Consensus 27 ld~i~~l-d~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~l 98 (110)
T d1seta1 27 LEALLAL-DREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALL 98 (110)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455543 33444455555555554322 334566778888888888888888888888888766
No 4
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.35 E-value=6.5 Score=30.79 Aligned_cols=32 Identities=6% Similarity=0.086 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 044000 156 LDLQDAKQKIAREIKAKDSAILAFANKIKEAE 187 (420)
Q Consensus 156 l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE 187 (420)
+.++++++.|.++-+..|+.|..++.+|++.-
T Consensus 4 ~~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 4 EGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55688888888888888888888888887654
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=55.00 E-value=9.2 Score=29.10 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 044000 158 LQDAKQKIAREIKAKDSAILAFANKIKEAERVLDIL 193 (420)
Q Consensus 158 lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~ 193 (420)
...+++.+++++......+.++..+++|++.+|+.+
T Consensus 6 ~~~~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL 41 (107)
T d1fxka_ 6 QLAQFQQLQQQAQAISVQKQTVEMQINETQKALEEL 41 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777788888889999999999999874
No 6
>d2piha1 a.281.1.1 (A:2-124) Uncharacterized protein YmcA {Bacillus subtilis [TaxId: 1423]}
Probab=54.04 E-value=39 Score=25.77 Aligned_cols=34 Identities=6% Similarity=0.167 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDY 197 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~ 197 (420)
.++++.|+++|... ...+.+.+||+.|..++.+-
T Consensus 71 ~~el~~l~~~l~~n-----p~v~~y~~Ae~~l~~lL~~V 104 (123)
T d2piha1 71 EAKIDALQEELEEI-----PVIQEFRDSQMEVNDLLQLV 104 (123)
T ss_dssp HHHHHHHHHHHHHS-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHH
Confidence 34444455544432 34566778888888888654
No 7
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=50.45 E-value=28 Score=26.62 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=12.5
Q ss_pred chhHHHHHHHHHhhHHHHH
Q 044000 128 PSTIKEIIACFTSLQTQLF 146 (420)
Q Consensus 128 ~~s~keil~lf~s~QtqL~ 146 (420)
--+..|++..|+.+-..|-
T Consensus 83 E~~~~eA~~~l~~ri~~l~ 101 (133)
T d1fxkc_ 83 KKNFEDAMESIKSQKNELE 101 (133)
T ss_dssp EEEHHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHHHH
Confidence 3577788888777654443
No 8
>d1noga_ a.25.2.2 (A:) Hypothetical protein Ta0546 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=49.15 E-value=63 Score=26.15 Aligned_cols=44 Identities=14% Similarity=0.145 Sum_probs=30.4
Q ss_pred HHHHHHHhhHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHhhHHH
Q 044000 133 EIIACFTSLQTQLFEAVAELQE---IL-DLQDAKQKIAREIKAKDSAI 176 (420)
Q Consensus 133 eil~lf~s~QtqL~eAV~ELQE---~l-~lQ~eIq~Lk~EIe~kD~~I 176 (420)
++...|...|..||..-.++-- .. --+..++.|++.|...++.+
T Consensus 28 ~~~~~L~~IQ~~Lf~lga~lA~~~~~~~i~~~~v~~LE~~id~~~~~l 75 (149)
T d1noga_ 28 DIRNDLFRIQNDLFVLGEDVSTGGKGRTVTREMIDYLEARVKEMKAEI 75 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhHHHhcccccccccHHHHHHHHHHHHHHHhhh
Confidence 5667788899999998888731 11 11556777777777777665
No 9
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=45.79 E-value=14 Score=27.54 Aligned_cols=14 Identities=14% Similarity=0.138 Sum_probs=6.7
Q ss_pred hHHHHHHHHHhhHH
Q 044000 130 TIKEIIACFTSLQT 143 (420)
Q Consensus 130 s~keil~lf~s~Qt 143 (420)
+++||-.+|+....
T Consensus 61 sl~eI~~~l~~~~~ 74 (109)
T d1r8da_ 61 RLDEIKEMLDHPNF 74 (109)
T ss_dssp CHHHHHHHHHCTTS
T ss_pred CHHHHHHHHhccCc
Confidence 34555555554433
No 10
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=45.69 E-value=24 Score=27.94 Aligned_cols=60 Identities=17% Similarity=0.093 Sum_probs=41.9
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 044000 133 EIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDI 192 (420)
Q Consensus 133 eil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~ 192 (420)
+.-.-+...+.++.++-.+++..+.+..+....+++++.....+.+...+|+.|+..|+.
T Consensus 50 ~~~~~l~~a~a~~~~a~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~a~~~l~~a~~~l~~ 109 (237)
T d1vf7a_ 50 TYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARINLRY 109 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhhhhhhcchhHHHHHHHhhhhcc
Confidence 444566677777777777777666665555556677777777777778888888877765
No 11
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.70 E-value=20 Score=27.80 Aligned_cols=36 Identities=8% Similarity=0.219 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044000 161 AKQKIAREIKAKDSAILAFANKIKEAERVLDILVDD 196 (420)
Q Consensus 161 eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD 196 (420)
+++.|++||+..+..-+.+=...+.+.+.|.++.+|
T Consensus 2 r~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 2 RLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 578899999999999999999999999999997754
No 12
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=39.95 E-value=47 Score=25.24 Aligned_cols=35 Identities=9% Similarity=0.179 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Q 044000 160 DAKQKIAREIKAKDSAILAFANKIKEAERVLDILV 194 (420)
Q Consensus 160 ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~V 194 (420)
++|..|++.++.....+..+..++.+.++.+..++
T Consensus 95 ~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~ 129 (133)
T d1fxkc_ 95 SQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555555555555555544443
No 13
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=39.56 E-value=62 Score=23.31 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=33.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 044000 133 EIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDI 192 (420)
Q Consensus 133 eil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~ 192 (420)
|-|.-|...+..|-..+.++.+.+..-=.=.+-+......+..+..+.+++.+|++..+.
T Consensus 3 eYl~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~Ea~~li~k 62 (65)
T d1lrza1 3 EYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEE 62 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666667777777777777666551111111222334445566677777777766543
No 14
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.94 E-value=4.1 Score=29.34 Aligned_cols=31 Identities=29% Similarity=0.476 Sum_probs=22.3
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 044000 325 ITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAV 357 (420)
Q Consensus 325 ~~~p~gWkpG~pv~lP~d~p~~pPpgWKpGDPi 357 (420)
+.+|+||+.|+-+-+.-.=.- - +|+.+||-+
T Consensus 35 i~Ip~G~~~G~~ir~~g~G~~-~-~~~~~GDl~ 65 (74)
T d1nlta1 35 VHVEPGMKDGQRIVFKGEADQ-A-PDVIPGDVV 65 (74)
T ss_dssp EEECTTCCTTCEEEETTCSCC-C-TTCBCCCEE
T ss_pred EEecccccCCeEEEecCCcCC-C-CCCCCCCEE
Confidence 678999999988777653322 2 478888865
No 15
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii yoelii [TaxId: 73239]}
Probab=37.39 E-value=4.1 Score=35.23 Aligned_cols=15 Identities=33% Similarity=0.786 Sum_probs=10.4
Q ss_pred CCCCCCCCCCCCCCC
Q 044000 347 PPPGWKPGDAVPLPP 361 (420)
Q Consensus 347 pPpgWKpGDPi~lpp 361 (420)
-|.+|||||.+-+||
T Consensus 173 ~PanW~~G~~~~~~p 187 (219)
T d1xcca_ 173 TPVNWNEGDKCCVIP 187 (219)
T ss_dssp BCTTCCTTSCEEECT
T ss_pred cCCCCCCCCceeeCC
Confidence 466788888766654
No 16
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=36.71 E-value=1e+02 Score=24.98 Aligned_cols=45 Identities=16% Similarity=0.304 Sum_probs=29.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHH-----HH-HHHHHHHHHHHHHHhhHHH
Q 044000 132 KEIIACFTSLQTQLFEAVAELQEI-----LD-LQDAKQKIAREIKAKDSAI 176 (420)
Q Consensus 132 keil~lf~s~QtqL~eAV~ELQE~-----l~-lQ~eIq~Lk~EIe~kD~~I 176 (420)
.++...|...|..||..-.++.-- .. -+..++.|++.|...++.+
T Consensus 33 ~~~~~~L~~IQ~~Lf~ig~~la~~~~~~~~~i~~~~v~~LE~~ID~~~~~l 83 (161)
T d1rtya_ 33 EDLTAELLTIQHELFDCGGDLAIVTERKDYKLTEESVSFLETRIDAYTAEA 83 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHHHHCCCccccccccCHHHHHHHHHHHHHHHhhh
Confidence 467777888899999988877410 00 1455666777776666544
No 17
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.10 E-value=16 Score=25.57 Aligned_cols=25 Identities=8% Similarity=0.106 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKI 183 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkL 183 (420)
+.++.+|.++++.....|..+.++|
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~~kL 27 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQRKL 27 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555554
No 18
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.09 E-value=4.5 Score=34.77 Aligned_cols=15 Identities=47% Similarity=0.959 Sum_probs=9.3
Q ss_pred CCCCCCCCCCCCCCC
Q 044000 347 PPPGWKPGDAVPLPP 361 (420)
Q Consensus 347 pPpgWKpGDPi~lpp 361 (420)
-|.+|+|||.+-+||
T Consensus 173 ~PanW~pGd~~~~~p 187 (220)
T d1prxa_ 173 TPVDWKDGDSVMVLP 187 (220)
T ss_dssp BCTTCCTTSCEEECT
T ss_pred cCCCCCCCCceecCC
Confidence 455677777766544
No 19
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.54 E-value=86 Score=23.80 Aligned_cols=29 Identities=14% Similarity=0.332 Sum_probs=21.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 044000 164 KIAREIKAKDSAILAFANKIKEAERVLDI 192 (420)
Q Consensus 164 ~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~ 192 (420)
....+|++|+..|+++.+.+.|...+...
T Consensus 159 ~~~~~i~eR~~eI~~Ie~sI~eL~~iF~d 187 (196)
T d1fioa_ 159 TALAEVQARHQELLKLEKSMAELTQLFND 187 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34566888899999998888887766443
No 20
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.03 E-value=69 Score=22.51 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=37.2
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 044000 124 IDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQD--------AKQKIAREIKAKDSAILAFANKIKEAERVL 190 (420)
Q Consensus 124 ~~~~~~s~keil~lf~s~QtqL~eAV~ELQE~l~lQ~--------eIq~Lk~EIe~kD~~I~~lakkLKeAE~~L 190 (420)
.+....+++.+++-+..++..|...-..+....+.-+ ....|+..+......|..|...+.+-...|
T Consensus 28 ~g~dl~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~l~~rw~~l~~~~~~r~~~L 102 (105)
T d1s35a2 28 PPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLL 102 (105)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3556677777777777766666655555544444322 223344445555555555555555555444
No 21
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=34.49 E-value=33 Score=25.99 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=7.6
Q ss_pred chhHHHHHHHHHhhHH
Q 044000 128 PSTIKEIIACFTSLQT 143 (420)
Q Consensus 128 ~~s~keil~lf~s~Qt 143 (420)
-..+|+++.+++..+.
T Consensus 60 l~eI~~~l~~~~~~~~ 75 (127)
T d1q06a_ 60 LEESGELVNLFNDPQR 75 (127)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhhccCCC
Confidence 3445555555554443
No 22
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.06 E-value=89 Score=23.22 Aligned_cols=35 Identities=3% Similarity=0.116 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKIKEAERVLDIL 193 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~ 193 (420)
...+..|+..++..+..|..+.++++..+.-|..+
T Consensus 64 ~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~ 98 (107)
T d1fxka_ 64 DELTEELQEKLETLQLREKTIERQEERVMKKLQEM 98 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566666666777777777777666666654
No 23
>d2oeqa1 a.281.1.2 (A:3-115) YheA-like protein {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.13 E-value=41 Score=25.49 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 044000 131 IKEIIACFTSLQTQLFEAVAELQE-ILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDY 197 (420)
Q Consensus 131 ~keil~lf~s~QtqL~eAV~ELQE-~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~ 197 (420)
.++++.-|..+|.+|.++-.-=++ ..+..++++++.++|..- ...+.+.+||+.|..++++-
T Consensus 36 a~~l~~~F~~~q~~lq~~q~~G~~~~~e~~~~l~~l~~~i~~n-----~~i~~~~~Ae~~l~~ll~~V 98 (113)
T d2oeqa1 36 AYRMFANVRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQN-----EKLARLMALEQQMSITIAEV 98 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTS-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555433211000 112245566666665543 23456778888888888654
No 24
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.76 E-value=80 Score=22.25 Aligned_cols=10 Identities=20% Similarity=0.664 Sum_probs=5.2
Q ss_pred hhhcccCccc
Q 044000 101 ISAFRGSLPT 110 (420)
Q Consensus 101 ~~~~rgslpt 110 (420)
+...|..||.
T Consensus 20 f~~L~~llP~ 29 (79)
T d1nlwa_ 20 LEKLKGLVPL 29 (79)
T ss_dssp HHHHHHSSCC
T ss_pred HHHHHHhCcc
Confidence 4445555664
No 25
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.15 E-value=1.3e+02 Score=23.91 Aligned_cols=71 Identities=8% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 044000 131 IKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIA-------REIKAKDSAILAFANKIKEAERVLDILVDDYSDYR 201 (420)
Q Consensus 131 ~keil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~Lk-------~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~~~yq 201 (420)
.+++....+.+++.--.-....++..+++.+.++++ +++++..........++.+|+......|..++.++
T Consensus 124 ~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~~~~~~~~~K~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~ 201 (288)
T d2efla1 124 QQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQ 201 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 26
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.74 E-value=63 Score=22.83 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKI 183 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkL 183 (420)
+++.+.+..+++..-.....+.++|
T Consensus 53 ~~~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 53 EDSDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444444444444444443
No 27
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.08 E-value=69 Score=26.62 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044000 152 LQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDD 196 (420)
Q Consensus 152 LQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD 196 (420)
.||-.+++.+++++...|+.|-..++++..|.. .+.++|..
T Consensus 1 aQe~~~Le~E~~~~~erI~~K~~~LqeLi~Q~i----afknLV~R 41 (148)
T d2azea1 1 AQECQNLEVERQRRLERIKQKQSQLQELILQQI----AFKNLVQR 41 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 367778888888889999999888888887765 55566643
No 28
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I, dispensable insert domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.90 E-value=30 Score=25.93 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 044000 161 AKQKIAREIKAKDSAILAFANKIKEAERVLD 191 (420)
Q Consensus 161 eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld 191 (420)
.|+.|+.-|+.+-..|....++|++|.+...
T Consensus 3 sMenLq~KI~~Kk~qi~~a~~e~K~ak~d~k 33 (72)
T d1k4ta1 3 SMMNLQTKIDAKKEQLADARRDLKSAKADAK 33 (72)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666666666666666665443
No 29
>d3bzka3 a.294.1.1 (A:1-324) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.21 E-value=28 Score=31.07 Aligned_cols=64 Identities=25% Similarity=0.311 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Q 044000 144 QLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDYSDYRRPKRVKS 208 (420)
Q Consensus 144 qL~eAV~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~~~yqa~KRlKs 208 (420)
+|-+-...+.....++++++.+-+-|+++...--++.+++..|+. ++.+=|=|.-|+.|||.+.
T Consensus 56 ~lr~i~~~~~~~~~L~~rk~~il~~i~~~~~Lt~~L~~~i~~a~t-~~eLEdly~PfK~kr~t~a 119 (324)
T d3bzka3 56 QLRMLEERLRYLRELEERRGAILASIEEQGKLTPELARDIKLADT-KTRLEDLYLPYKQKRRTKG 119 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHCCS-HHHHHHHHGGGSCCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHcCCC-HHHHHHHHHHhccccCcHH
Confidence 455555555666677888888888999998888889999988875 3333333677877666554
No 30
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.96 E-value=1e+02 Score=22.08 Aligned_cols=67 Identities=3% Similarity=0.071 Sum_probs=49.9
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Q 044000 128 PSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQK--------IAREIKAKDSAILAFANKIKEAERVLDILV 194 (420)
Q Consensus 128 ~~s~keil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~--------Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~V 194 (420)
..++...+.-+..+++.|...-..++.+.+.-+++.. |+.-++.....|..|...+++=...|++.|
T Consensus 36 ~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~L~~~W~~L~~~~~~R~~~Le~~i 110 (114)
T d1hcia4 36 TGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQI 110 (114)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888888888888888877777777766555544 555677777888888888888888888765
No 31
>d1n8ja_ c.47.1.10 (A:) Alkyl hydroperoxide reductase AhpC {Salmonella typhimurium [TaxId: 90371]}
Probab=26.15 E-value=14 Score=30.55 Aligned_cols=11 Identities=36% Similarity=0.806 Sum_probs=7.3
Q ss_pred CCCCCCCCCCC
Q 044000 328 PSGWKPGMPVE 338 (420)
Q Consensus 328 p~gWkpG~pv~ 338 (420)
|..|+||+.|-
T Consensus 166 p~~W~~g~~~~ 176 (186)
T d1n8ja_ 166 PAKWKEGEATL 176 (186)
T ss_dssp CTTCCTTSCCB
T ss_pred CCCCCCCCcee
Confidence 66777777653
No 32
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=25.02 E-value=1.1e+02 Score=22.60 Aligned_cols=7 Identities=14% Similarity=0.131 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 044000 132 KEIIACF 138 (420)
Q Consensus 132 keil~lf 138 (420)
++|-.++
T Consensus 65 ~eIk~~l 71 (118)
T d1r8ea1 65 EEMKKAQ 71 (118)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 3333333
No 33
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.84 E-value=1.1e+02 Score=21.98 Aligned_cols=7 Identities=43% Similarity=0.942 Sum_probs=3.2
Q ss_pred hcccCcc
Q 044000 103 AFRGSLP 109 (420)
Q Consensus 103 ~~rgslp 109 (420)
..|--||
T Consensus 27 ~Lr~llP 33 (88)
T d1nkpa_ 27 ALRDQIP 33 (88)
T ss_dssp HHHTTCG
T ss_pred HHHHhCC
Confidence 3344455
No 34
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.47 E-value=1.1e+02 Score=21.41 Aligned_cols=69 Identities=4% Similarity=0.069 Sum_probs=36.7
Q ss_pred CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 044000 125 DSSPSTIKEIIACFTSLQTQLFEAVAELQEILDL--------QDAKQKIAREIKAKDSAILAFANKIKEAERVLDIL 193 (420)
Q Consensus 125 ~~~~~s~keil~lf~s~QtqL~eAV~ELQE~l~l--------Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~ 193 (420)
+....++...+.-+...+.++...-..+...... ......|+..+...+..|..|...+++-...|+.+
T Consensus 31 g~d~~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~R~~~L~ea 107 (110)
T d1u5pa1 31 GKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNES 107 (110)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666555544444444333322 11223455566666666666666666666555554
No 35
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=23.90 E-value=1.3e+02 Score=23.42 Aligned_cols=25 Identities=16% Similarity=0.368 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhh
Q 044000 173 DSAILAFANKIKEAERVLDILVDDY 197 (420)
Q Consensus 173 D~~I~~lakkLKeAE~~Ld~~VdD~ 197 (420)
|..+.+++++|.+.|..|...-+.|
T Consensus 90 ~~~~~~l~~~l~~~E~~Ia~aR~~Y 114 (149)
T d2etda1 90 DANFRQLMDELAGTENRIAVARRDY 114 (149)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777777777666655444
No 36
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=23.82 E-value=76 Score=22.77 Aligned_cols=53 Identities=9% Similarity=0.240 Sum_probs=35.0
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044000 127 SPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDD 196 (420)
Q Consensus 127 ~~~s~keil~lf~s~QtqL~eAV~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD 196 (420)
+-....+|+..|++-+.-|-++++.|++=.+ .++.+.++|.+||+-+..+..|
T Consensus 11 ~l~~LE~IV~~LE~g~l~Leesl~~ye~G~~-----------------L~~~C~~~L~~ae~ki~~l~~~ 63 (68)
T d1vp7a_ 11 ALAELESLVSAMENGTLPLEQSLSAYRRGVE-----------------LARVCQDRLAQAEQQVKVLEGD 63 (68)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcc
Confidence 3345566777777777777888877766543 3556667777777777766544
No 37
>d2iaza1 a.281.1.2 (A:1-111) Hypothetical protein SP1372 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.55 E-value=1.3e+02 Score=22.17 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDYS 198 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~~ 198 (420)
.++++.+.++|..-. ..+.+.+||+.|..++.+-+
T Consensus 66 ~~~l~~l~~~i~~n~-----~i~~~~~Ae~~l~~ll~~Vn 100 (111)
T d2iaza1 66 QAKMEGFGKQIQGNS-----LLSEFFTKQQQLAIYLSDIE 100 (111)
T ss_dssp HHHHHHHHHHHHTCH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHH
Confidence 455555665555433 35677889999999886643
No 38
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.45 E-value=1.1e+02 Score=21.14 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 044000 161 AKQKIAREIKAKDSAILAFANKIKEAERVLDIL 193 (420)
Q Consensus 161 eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~ 193 (420)
....|+.-+...+..+..|...+.+=...|+.+
T Consensus 73 ~~~~I~~~l~~L~~~w~~L~~~~~~R~~~Le~a 105 (106)
T d1s35a1 73 EYLLLGQRLEGLDTGWDALGRMWESRSHTLAQC 105 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555566666666666666666555555543
No 39
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=22.94 E-value=63 Score=30.34 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Q 044000 161 AKQKIAREIKAKDSAILAFANKIK 184 (420)
Q Consensus 161 eIq~Lk~EIe~kD~~I~~lakkLK 184 (420)
++++|++|++++...|..+.+-|+
T Consensus 441 e~~kL~~E~~~l~~ei~eL~~iL~ 464 (493)
T d1ab4a_ 441 EHEKLLDEYKELLDQIAELLRILG 464 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344455555555555555554443
No 40
>d2imla1 b.45.1.4 (A:1-189) Hypothetical protein AF1834 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.51 E-value=24 Score=29.77 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.6
Q ss_pred cCCCchHHHHHHHHHHHhhhhhhccc
Q 044000 69 LLPPLPRAQALLLQMASLASKLFEVS 94 (420)
Q Consensus 69 llppl~raq~ll~~ma~las~lfe~s 94 (420)
-++++-|||+.+-+|+-|+|||.=++
T Consensus 125 ~~~~~NRa~~aVIEaaVl~TRl~il~ 150 (189)
T d2imla1 125 RVRAINRGLSAVIEALVHATRYVAIK 150 (189)
T ss_dssp BCCCBCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCccHHHHHHHHHHHHHHHhccCC
Confidence 45899999999999999999996443
No 41
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.56 E-value=47 Score=24.12 Aligned_cols=98 Identities=9% Similarity=0.150 Sum_probs=56.2
Q ss_pred hhhhhhcccCCcchhhhhcccCcccccccCCCCCCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHH-------
Q 044000 86 LASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQPPPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDL------- 158 (420)
Q Consensus 86 las~lfe~s~nr~~w~~~~rgslptfl~s~~~~~~~~p~~~~~~s~keil~lf~s~QtqL~eAV~ELQE~l~l------- 158 (420)
++-+|+.-.-.--.|++...- +|.+. .+.+.....++..+.-+......+...-..+......
T Consensus 15 ~~q~F~~~~~~l~~Wl~~~e~----~l~~~------~~~~~d~~~v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~ 84 (124)
T d1quua1 15 LAEKFRQKASTHETWAYGKEQ----ILLQK------DYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNEL 84 (124)
T ss_dssp HHHHHHHHHHHHHHHTTTHHH----HHHCC------CCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhCC------CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 445666555556678876543 34433 2334556777777776666666654444433333332
Q ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 044000 159 -QDAKQKIAREIKAKDSAILAFANKIKEAERVLDIL 193 (420)
Q Consensus 159 -Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~ 193 (420)
......|++-++..+..|..|...+++=...|+.+
T Consensus 85 ~~~~~~~i~~~~~~l~~rW~~L~~~~~~R~~~L~~a 120 (124)
T d1quua1 85 DYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERM 120 (124)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334566666777777777777766666666654
No 42
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.43 E-value=1.3e+02 Score=21.41 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=24.0
Q ss_pred hHHHHHHHHHhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 044000 130 TIKEIIACFTSLQTQLFEAV---AELQEILDLQDAKQKIAREIKAKDSAILAF 179 (420)
Q Consensus 130 s~keil~lf~s~QtqL~eAV---~ELQE~l~lQ~eIq~Lk~EIe~kD~~I~~l 179 (420)
.++++..-|+.+...|.... ..+.....++++-+.++++|..+...|..+
T Consensus 22 ~~~~l~~Wl~~~e~~l~~~~~~~~d~~~v~~l~~~h~~~~~~i~~~~~~v~~l 74 (124)
T d1quua1 22 KASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQI 74 (124)
T ss_dssp HHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 45666776777666653221 123333333444444455554444444433
No 43
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.35 E-value=1.9e+02 Score=22.78 Aligned_cols=40 Identities=5% Similarity=0.063 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc
Q 044000 159 QDAKQKIAREIKAKDSAILAFANKIKEAERVLDILVDDYS 198 (420)
Q Consensus 159 Q~eIq~Lk~EIe~kD~~I~~lakkLKeAE~~Ld~~VdD~~ 198 (420)
++.+..+..++......+......|+.+.......+.++.
T Consensus 101 ~~~~k~~~~~~~~~~k~l~~~~~~~~k~k~~y~~~~~e~e 140 (279)
T d2efka1 101 KQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAE 140 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556666666666666666666666666666555543
Done!