BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044009
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P45168|POTD1_HAEIN Spermidine/putrescine-binding periplasmic protein 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=potD-B PE=3 SV=1
Length = 360
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 11 FKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSND 51
F W DLW+P+ A ++ +++ REV L +G N+ D
Sbjct: 160 FTSWADLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD 200
>sp|P0AFL0|POTD_SHIFL Spermidine/putrescine-binding periplasmic protein OS=Shigella
flexneri GN=potD PE=3 SV=1
Length = 348
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRIAVQQN 60
W DLW+P+ G + + + REV L+ +G S N+ D I N
Sbjct: 151 WADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYN 197
>sp|P0AFK9|POTD_ECOLI Spermidine/putrescine-binding periplasmic protein OS=Escherichia
coli (strain K12) GN=potD PE=1 SV=1
Length = 348
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRIAVQQN 60
W DLW+P+ G + + + REV L+ +G S N+ D I N
Sbjct: 151 WADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYN 197
>sp|P44731|POTD2_HAEIN Spermidine/putrescine-binding periplasmic protein 2 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=potD-A PE=3 SV=2
Length = 350
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSND 51
W DLW+P+ G++ M + REV L G S N+ +
Sbjct: 154 WADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTN 191
>sp|P0A2C7|POTD_SALTY Spermidine/putrescine-binding periplasmic protein OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=potD PE=3 SV=1
Length = 348
Score = 33.5 bits (75), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI 55
W DLW+P+ + + + REV L+ +G S N+ D I
Sbjct: 151 WADLWKPEYKNSLLLTDDAREVFQMALRKLGYSGNTTDPKEI 192
>sp|P0A2C8|POTD_SALTI Spermidine/putrescine-binding periplasmic protein OS=Salmonella
typhi GN=potD PE=3 SV=1
Length = 348
Score = 33.5 bits (75), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI 55
W DLW+P+ + + + REV L+ +G S N+ D I
Sbjct: 151 WADLWKPEYKNSLLLTDDAREVFQMALRKLGYSGNTTDPKEI 192
>sp|Q09270|YQF6_CAEEL CRAL-TRIO domain-containing protein C34C12.6 OS=Caenorhabditis
elegans GN=C34C12.6 PE=4 SV=2
Length = 400
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 14 WKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRIAVQQNLALLGNQYLP 70
W+D W P++ RI + N PR ++G + K V + ++ RI + + + L ++LP
Sbjct: 200 WQD-WFPEMVQRIYLTNPPR-LLGLLWKVARVFLSEENLKRIEIISDKSDLAGKFLP 254
>sp|Q9UQ84|EXO1_HUMAN Exonuclease 1 OS=Homo sapiens GN=EXO1 PE=1 SV=2
Length = 846
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 108 DQRLTMTDNLSVSITSSLFNSLLLPPTLSRIRSPYMLSWS 147
D+ TD S S SS F + PPTL +RS + SWS
Sbjct: 575 DKATVFTDEESYSFESSKFTRTISPPTLGTLRSCF--SWS 612
>sp|Q8R0I0|ACE2_MOUSE Angiotensin-converting enzyme 2 OS=Mus musculus GN=Ace2 PE=1 SV=1
Length = 805
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 7 NENGFKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI------AVQQN 60
N N F W W P I + S + +G + +N++ A+++
Sbjct: 599 NRNSFVGWNTEWSPYADQSIKVRISLKSALGA----NAYEWTNNEMFLFRSSVAYAMRKY 654
Query: 61 LALLGNQYLP----DLNRSD------------SPSRLSYPTPHLRVSDKQCSIKAIRLSR 104
+++ NQ +P D+ SD SP +S P V D AIR+SR
Sbjct: 655 FSIIKNQTVPFLEEDVRVSDLKPRVSFYFFVTSPQNVSDVIPRSEVED------AIRMSR 708
Query: 105 SRIDQRLTMTDN 116
RI+ + DN
Sbjct: 709 GRINDVFGLNDN 720
>sp|Q5RFN1|ACE2_PONAB Angiotensin-converting enzyme 2 OS=Pongo abelii GN=ACE2 PE=2 SV=1
Length = 805
Score = 30.4 bits (67), Expect = 5.4, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 26/129 (20%)
Query: 7 NENGFKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGR------------ 54
N+N F W W P I + S + +G +N N+I
Sbjct: 599 NKNSFVGWSTDWSPYADQSIKVRISLKSALGN----KAYEWNDNEIYLFRSSVAYAMRKY 654
Query: 55 -IAVQQNLALLGNQYLPDLNRSDSPSRLSYP---TPHLRVSD---KQCSIKAIRLSRSRI 107
+ V+ + L G + D+ ++ R+S+ T VSD + KAIR+SRSRI
Sbjct: 655 FLEVKNQMILFGEE---DVRVANLKPRISFNFFVTAPKNVSDIIPRTEVEKAIRMSRSRI 711
Query: 108 DQRLTMTDN 116
+ + DN
Sbjct: 712 NDAFRLNDN 720
>sp|Q56H28|ACE2_FELCA Angiotensin-converting enzyme 2 OS=Felis catus GN=ACE2 PE=2 SV=1
Length = 805
Score = 30.0 bits (66), Expect = 6.9, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 28/156 (17%)
Query: 7 NENGFKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI------AVQQN 60
N N F W W+P I + S + +G +N N++ A+++
Sbjct: 599 NRNSFVGWNTDWRPYADQSIKVRISLKSALGD----EAYEWNDNEMYLFRSSVAYAMREY 654
Query: 61 LALLGNQYLP----DLNRSDSPSRLSYP---TPHLRVSD---KQCSIKAIRLSRSRIDQR 110
+ + NQ +P ++ S+ R+S+ T VSD + +AIR+SRSRI+
Sbjct: 655 FSKVKNQTIPFVEDNVWVSNLKPRISFNFFVTASKNVSDVIPRSEVEEAIRMSRSRINDA 714
Query: 111 LTMTDNLSVSITSSLFNSLLLPPTLSRIRSPYMLSW 146
+ DN L + PTLS P + W
Sbjct: 715 FRLDDN--------SLEFLGIQPTLSPPYQPPVTIW 742
>sp|Q6G0J4|MUTL_BARQU DNA mismatch repair protein MutL OS=Bartonella quintana (strain
Toulouse) GN=mutL PE=3 SV=1
Length = 612
Score = 30.0 bits (66), Expect = 7.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 27 SMVNSPREVIGTVLKYMGVSYNSNDIGRIAVQQNLALLGNQYLPDLNRSDSPSRLSY 83
+ NS + + + + MG + N I A ++++ L G LP NRS+S + +Y
Sbjct: 198 ATANSTQGQLQRITQIMGKEFAPNSIALNAKRESIRLTGFACLPSFNRSNSLHQFAY 254
>sp|Q9BYF1|ACE2_HUMAN Angiotensin-converting enzyme 2 OS=Homo sapiens GN=ACE2 PE=1 SV=2
Length = 805
Score = 30.0 bits (66), Expect = 7.1, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 20/126 (15%)
Query: 7 NENGFKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI------AVQQN 60
N+N F W W P I + S + +G +N N++ A++Q
Sbjct: 599 NKNSFVGWSTDWSPYADQSIKVRISLKSALGD----KAYEWNDNEMYLFRSSVAYAMRQY 654
Query: 61 LALLGNQYL----PDLNRSDSPSRLSYP---TPHLRVSD---KQCSIKAIRLSRSRIDQR 110
+ NQ + D+ ++ R+S+ T VSD + KAIR+SRSRI+
Sbjct: 655 FLKVKNQMILFGEEDVRVANLKPRISFNFFVTAPKNVSDIIPRTEVEKAIRMSRSRINDA 714
Query: 111 LTMTDN 116
+ DN
Sbjct: 715 FRLNDN 720
>sp|Q56NL1|ACE2_PAGLA Angiotensin-converting enzyme 2 OS=Paguma larvata GN=ACE2 PE=1 SV=1
Length = 805
Score = 30.0 bits (66), Expect = 7.6, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 7 NENGFKDWKDLWQPKLAGRISMVNSPREVIGTVLKYMGVSYNSNDIGRI------AVQQN 60
N N F W W+P I + S + +G +N N++ A+++
Sbjct: 599 NRNSFVGWDTDWRPYSDQSIKVRISLKSALGE----KAYEWNDNEMYLFRSSIAYAMREY 654
Query: 61 LALLGNQYLP----DLNRSDSPSRLSYP---TPHLRVSD---KQCSIKAIRLSRSRIDQR 110
+ + NQ +P ++ SD R+S+ T VSD + AIR+SRSRI+
Sbjct: 655 FSKVKNQTIPFVEDNVWVSDLKPRISFNFFVTFSNNVSDVIPRSEVEDAIRMSRSRINDA 714
Query: 111 LTMTDNLSVSITSSLFNSLLLPPTLSRIRSPYMLSW 146
+ DN L + PTLS P + W
Sbjct: 715 FRLDDN--------SLEFLGIEPTLSPPYRPPVTIW 742
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,139,013
Number of Sequences: 539616
Number of extensions: 2196108
Number of successful extensions: 4605
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4591
Number of HSP's gapped (non-prelim): 28
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)